| Records |
| Author |
Coutand, C.; Chevolot, M.; Lacointe, A.; Rowe, N.; Scotti, I. |
| Title |
Mechanosensing of stem bending and its interspecific variability in five neotropical rainforest species |
Type |
Journal Article |
| Year |
2010 |
Publication |
Annals of Botany |
Abbreviated Journal |
Ann. Bot. |
Volume  |
105 |
Issue |
2 |
Pages |
341-347 |
| Keywords |
Mechanosensing; interspecific variability; trees; lianas; rain forest; neotropical species; bending; biomechanics; Bauhinia; Eperua; Symphonia; Tachigali |
| Abstract |
In rain forests, sapling survival is highly dependent on the regulation of trunk slenderness (height/diameter ratio): shade-intolerant species have to grow in height as fast as possible to reach the canopy but also have to withstand mechanical loadings (wind and their own weight) to avoid buckling. Recent studies suggest that mechanosensing is essential to control tree dimensions and stability-related morphogenesis. Differences in species slenderness have been observed among rainforest trees; the present study thus investigates whether species with different slenderness and growth habits exhibit differences in mechanosensitivity. Recent studies have led to a model of mechanosensing (sum-of-strains model) that predicts a quantitative relationship between the applied sum of longitudinal strains and the plant's responses in the case of a single bending. Saplings of five different neotropical species (Eperua falcata, E. grandiflora, Tachigali melinonii, Symphonia globulifera and Bauhinia guianensis) were subjected to a regimen of controlled mechanical loading phases (bending) alternating with still phases over a period of 2 months. Mechanical loading was controlled in terms of strains and the five species were subjected to the same range of sum of strains. The application of the sum-of-strain model led to a dose-response curve for each species. Dose-response curves were then compared between tested species. The model of mechanosensing (sum-of-strain model) applied in the case of multiple bending as long as the bending frequency was low. A comparison of dose-response curves for each species demonstrated differences in the stimulus threshold, suggesting two groups of responses among the species. Interestingly, the liana species B. guianensis exhibited a higher threshold than other Leguminosae species tested. This study provides a conceptual framework to study variability in plant mechanosensing and demonstrated interspecific variability in mechanosensing. |
| Address |
[Coutand, Catherine; Lacointe, Andre] Univ Clermont Ferrand, INRA, PIAF, UMR 547, F-63000 Clermont Ferrand, France, Email: coutand@clermont.inra.fr |
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OXFORD UNIV PRESS |
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0305-7364 |
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ISI:000274347000025 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
71 |
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| Author |
Foucaud, J.; Estoup, A.; Loiseau, A.; Rey, O.; Orivel, J. |
| Title |
Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab |
Type |
Journal Article |
| Year |
2010 |
Publication |
Heredity |
Abbreviated Journal |
Heredity |
| Volume |
105 |
Issue |
2 |
Pages |
205-212 |
| Keywords |
reproduction system; thelytokous parthenogenesis; male clonality; genetic caste determination; Wasmannia auropunctata |
| Abstract |
Previous studies indicate that some populations of the little fire ant, Wasmannia auropunctata, display an unusual reproduction system polymorphism. Although some populations have a classical haplodiploid reproduction system, in other populations queens are produced by thelytokous parthenogenesis, males are produced by a male clonality system and workers are produced sexually. An atypical genetic caste determination system was also suggested. However, these conclusions were indirectly inferred from genetic studies on field population samples. Here we set up experimental laboratory nests that allow the control of the parental relationships between individuals. The queens heading those nests originated from either putatively clonal or sexual populations. We characterized the male, queen and worker offspring they produced at 12 microsatellite loci. Our results unambiguously confirm the unique reproduction system polymorphism mentioned above and that male clonality is strictly associated with thelytokous parthenogenesis. We also observed direct evidence of the rare production of sexual gynes and arrhenotokous males in clonal populations. Finally, we obtained evidence of a genetic basis for caste determination. The evolutionary significance of the reproduction system polymorphism and genetic caste determination as well as future research opportunities are discussed. Heredity (2010) 105, 205-212; doi: 10.1038/hdy.2009.169; published online 25 November 2009 |
| Address |
[Foucaud, J.; Estoup, A.; Loiseau, A.; Rey, O.] INRA, UMR CBGP, IRD, Cirad,Montpellier SupAgro, Montferrier Sur Lez, France, Email: julien.foucaud@legs.cnrs-gif.fr |
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NATURE PUBLISHING GROUP |
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0018-067X |
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| Notes |
ISI:000280111800007 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
78 |
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| Author |
Touchard, A.; Dauvois, M.; Arguel, M.-J.; Petitclerc, F.; Leblanc, M.; Dejean, A.; Orivel, J.; Nicholson, G.M.; Escoubas, P. |
| Title |
Elucidation of the unexplored biodiversity of ant venom peptidomes via MALDI-TOF mass spectrometry and its application for chemotaxonomy |
Type |
Journal Article |
| Year |
2014 |
Publication |
Journal of Proteomics |
Abbreviated Journal |
J. Proteomics |
| Volume |
105 |
Issue |
|
Pages |
217-231 |
| Keywords |
Ant venom; Chemotaxonomy; Maldi-Tof Ms; Peptide; Peptidome; Ponerinae; ant venom; cytochrome c oxidase; ant; article; biodiversity; chemotaxonomy; correlational study; DNA sequence; French Guiana; Hymenoptera; matrix assisted laser desorption ionization time of flight mass spectrometry; mitochondrial gene; nonhuman; Odontomachus biumbonatus; Odontomachus haematodus; Odontomachus hastatus; Odontomachus mayi; Odontomachus scalptus; Pachcondyla apicalis; Pachcondyla arhuaca; Pachcondyla commutata; Pachcondyla constricta; Pachcondyla crassinola; Pachcondyla goeldii; Pachcondyla inversa; Pachcondyla marginata; Pachcondyla procidua; Pachcondyla stigma; Pachcondyla verenae; Pachcondyla villosa; peptidomics; phylogeny; priority journal; Animalia; Formicidae; Hymenoptera; Odontomachus; Pachycondyla; Pachycondyla apicalis; Pachycondyla stigma; Ponerinae |
| Abstract |
The rise of integrative taxonomy, a multi-criteria approach used in characterizing species, fosters the development of new tools facilitating species delimitation. Mass spectrometric (MS) analysis of venom peptides from venomous animals has previously been demonstrated to be a valid method for identifying species. Here we aimed to develop a rapid chemotaxonomic tool for identifying ants based on venom peptide mass fingerprinting. The study focused on the biodiversity of ponerine ants (Hymenoptera: Formicidae: Ponerinae) in French Guiana. Initial experiments optimized the use of automated matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) to determine variations in the mass profiles of ant venoms using several MALDI matrices and additives. Data were then analyzed via a hierarchical cluster analysis to classify the venoms of 17 ant species. In addition, phylogenetic relationships were assessed and were highly correlated with methods using DNA sequencing of the mitochondrial gene cytochrome c oxidase subunit 1. By combining a molecular genetics approach with this chemotaxonomic approach, we were able to improve the accuracy of the taxonomic findings to reveal cryptic ant species within species complexes. This chemotaxonomic tool can therefore contribute to more rapid species identification and more accurate taxonomies. Biological significance: This is the first extensive study concerning the peptide analysis of the venom of both Pachycondyla and Odontomachus ants. We studied the venoms of 17 ant species from French Guiana that permitted us to fine-tune the venom analysis of ponerine ants via MALDI-TOF mass spectrometry. We explored the peptidomes of crude ant venom and demonstrated that venom peptides can be used in the identification of ant species. In addition, the application of this novel chemotaxonomic method combined with a parallel genetic approach using COI sequencing permitted us to reveal the presence of cryptic ants within both the Pachycondyla apicalis and Pachycondyla stigma species complexes. This adds a new dimension to the search for means of exploiting the enormous biodiversity of venomous ants as a source for novel therapeutic drugs or biopesticides. This article is part of a Special Issue entitled: Proteomics of non-model organisms. © 2014 Elsevier B.V. |
| Address |
Neurotoxin Research Group, School of Medical and Molecular Biosciences, University of Technology, Sydney, NSW, Australia |
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| Publisher |
Elsevier |
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18767737 (Issn) |
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| Notes |
Cited By (since 1996):1; Export Date: 30 July 2014; Correspondence Address: Touchard, A.; UMR-EcoFoG, Campus Agronomique, BP 316, 97379 Kourou Cedex, France; email: axel.touchard@ecofog.gf; Chemicals/CAS: cytochrome c oxidase, 72841-18-0, 9001-16-5 |
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no |
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EcoFoG @ webmaster @ |
Serial |
555 |
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| Author |
Dejean, A.; Azémar, F.; Petitclerc, F.; Delabie, J.H.C.; Corbara, B.; Leroy, C.; Céréghino, R.; Compin, A. |
| Title |
Highly modular pattern in ant-plant interactions involving specialized and non-specialized myrmecophytes |
Type |
Journal Article |
| Year |
2018 |
Publication |
Science of Nature |
Abbreviated Journal |
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| Volume |
105 |
Issue |
43 |
Pages |
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| Keywords |
Ant-plant mutualism; Ecological network; Modularity; Myrmecophytes; Nestedness; Sympatric species |
| Abstract |
Because Tachia guianensis (Gentianaceae) is a “non-specialized myrmecophyte” associated with 37 ant species, we aimed to determine if its presence alters the ant guild associated with sympatric “specialized myrmecophytes” (i.e., plants sheltering a few ant species in hollow structures). The study was conducted in a hilly zone of a neotropical rainforest where two specialized myrmecophytes grow at the bottom of the slopes, another at mid-slope, and a fourth on the hilltops. Tachia guianensis, which occurred everywhere, had its own guild of associated ant species. A network analysis showed that its connections with the four other myrmecophytes were rare and weak, the whole resulting in a highly modular pattern of interactions with one module (i.e., subnetwork) per myrmecophyte. Three ant species parasitized three out of the four specialized myrmecophytes (low nestedness noted), but were not or barely associated with T. guianensis that therefore did not influence the parasitism of specialized myrmecophytes. © 2018, Springer-Verlag GmbH Germany, part of Springer Nature. |
| Address |
AMAP, IRD, CIRAD, CNRS, INRA, Université de Montpellier, Montpellier, France |
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| Notes |
Export Date: 1 September 2018 |
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no |
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EcoFoG @ webmaster @ |
Serial |
815 |
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| Author |
Fouquet, A.; Ledoux, J.-B.; Dubut, V.; Noonan, B.P.; Scotti, I. |
| Title |
The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog |
Type |
Journal Article |
| Year |
2012 |
Publication |
Biological Journal of the Linnean Society |
Abbreviated Journal |
Biol. J. Linn. Soc. |
| Volume |
106 |
Issue |
2 |
Pages |
356-373 |
| Keywords |
Amazonia; Amphibian; Gene flow; Microsatellites; Mitochondrial DNA; Spatial genetic structure |
| Abstract |
Disentangling the impact of landscape features such as rivers and historical events on dispersal is a challenging but necessary task to gain a comprehensive picture of the evolution of diverse biota such as that found in Amazonia. Adenomera andreae, a small, territorial, terrestrial frog species of the Amazonian forest represents a good model for such studies. We combined cytochromeb sequences with 12 microsatellites to investigate the genetic structure at two contrasted spatial scales in French Guiana: along a ∼6-km transect, to evaluate dispersal ability, and between paired bank populations along a ∼65-km stretch of the Approuague river, to test the effect of rivers as barriers to dispersal. We observed significant spatial genetic structure between individuals at a remarkably small geographical scale, and conclude that the species has a restricted dispersal ability that is probably tied to its life-history traits. Mitochondrial and microsatellite data also indicate a high level of differentiation among populations on opposite banks of the river, and, in some cases, among populations on the same riverbank. These results suggest that the observed population structure in A.andreae is the result of restricted dispersal abilities combined with the action of rivers and Quaternary population isolation. Given that Amazonia hosts a great portion of anurans, as well as other small vertebrates, that display life-history traits comparable with A.andreae, we argue that our analyses provide new insights into the complex interactions among evolutionary processes shaping Amazonian biodiversity. © 2012 The Linnean Society of London. |
| Address |
INRA, UMR ECOFOG, Campus agronomique, Avenue de France, BP 709, 97387 Kourou, French Guiana, France |
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00244066 (Issn) |
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Export Date: 2 May 2012; Source: Scopus; Coden: Bjlsb; doi: 10.1111/j.1095-8312.2012.01871.x; Language of Original Document: English; Correspondence Address: Fouquet, A.; Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Caixa Postal 11461, CEP 05422-970, São Paulo, Brazil; email: fouquet.antoine@gmail.com |
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no |
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EcoFoG @ webmaster @ |
Serial |
397 |
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Henkel, T.W.; Wilson, A.W.; Aime, M.C.; Dierks, J.; Uehling, J.K.; Roy, M.; Schimann, H.; Wartchow, F.; Mueller, G.M. |
| Title |
Cantharellaceae of Guyana II: New species of Craterellus, new South American distribution records for Cantharellus guyanensis and Craterellus excelsus, and a key to the Neotropical taxa |
Type |
Journal Article |
| Year |
2014 |
Publication |
Mycologia |
Abbreviated Journal |
Mycologia |
| Volume |
106 |
Issue |
2 |
Pages |
307-324 |
| Keywords |
Cantharellales; Coccoloba; Dicymbe; Ectomycorrhizae; Guiana shield; Tropical fungi |
| Abstract |
Craterellus olivaceoluteus sp. nov. and Craterellus cinereofimbriatus sp. nov. are described as new to science. These fungi were collected from Guyana in association with ectomycorrhizal host trees in the genera Dicymbe (Fabaceae subfam. Caesalpinioideae) and Pakaraimaea (Dipterocarpaceae). Cantharellus guyanensis Mont., originally described from French Guiana, is redescribed from recent collections from Guyana, with additional range extensions for the species provided based on material examined from French Guiana, Venezuela, and north central, northeastern and southern Brazil, circumscribing nearly the entire Guiana Shield region and beyond. A new distribution record from French Guiana is provided for Craterellus excelsus T.W. Henkel & Aime. Macromorphological, micromorphological and habitat data are provided for the new species and C. guyanensis as well as DNA sequence data from the nuclear ribosomal regions of the internal transcribed spacer (ITS) and 28S large subunit (LSU); additional sequence data is provided for C. guyanensis and C. excelsus specimens collected outside Guyana. The relationships of these taxa within the Cantharellaceae were evaluated with phylogenetic analyses of ITS and LSU sequence data. This work brings the total number of Cantharellaceae species known from Guyana to eight. A key to the Cantharellus and Craterellus species known from the lowland Neotropics and extralimital montane Central and South America is provided. © 2014 by The Mycological Society of America. |
| Address |
Department of Biological Sciences, Boise State University, Boise, ID, 83725, United States |
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| Publisher |
Allen Press Inc. |
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15572536 (Issn) |
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Export Date: 10 June 2014; Coden: Mycoa; Correspondence Address: Henkel, T.W.; Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, United States; email: twh5@humboldt.edu; Funding Details: DEB-0732968, NSF, National Science Foundation |
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no |
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EcoFoG @ webmaster @ |
Serial |
546 |
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Rivalland, C.; Madhkour, S.; Salvin, P.; Robert, F. |
| Title |
Electrochemical and microbial monitoring of multi-generational electroactive biofilms formed from mangrove sediment |
Type |
Journal Article |
| Year |
2015 |
Publication |
Bioelectrochemistry |
Abbreviated Journal |
Bioelectrochemistry |
| Volume |
106 |
Issue |
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Pages |
125-132 |
| Keywords |
Dissimilarity; High-throughput sequencing; Mes; Microbial diversity; Syntrophism |
| Abstract |
Electroactive biofilms were formed from French Guiana mangrove sediments for the analysis of bacterial communities' composition. The electrochemical monitoring of three biofilm generations revealed that the bacterial selection occurring at the anode, supposedly leading microbial electrochemical systems (MESs) to be more efficient, was not the only parameter to be taken into account so as to get the best electrical performance (maximum current density). Indeed, first biofilm generations produced a stable current density reaching about 18A/m2 while second and third generations produced current densities of about 10A/m2. MES bacterial consortia were characterized thanks to molecular biology techniques: DGGE and MiSeq® sequencing (Illumina®). High-throughput sequencing data statistical analysis confirmed preliminary DGGE data analysis, showing strong similarities between electroactive biofilms of second and third generations, but also revealing both selection and stabilization of the biofilms. © 2015 Elsevier B.V. |
| Address |
Laboratoire des Matériaux et Molécules en Milieu Amazonien, UAG-UMR EcoFoG, 2091 route de Baduel, Campus TrouBiran, Cayenne, Guyane Française, France |
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| Notes |
Export Date: 11 September 2015 |
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no |
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EcoFoG @ webmaster @ |
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622 |
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Donald, J.; Maxfield, P.; Leroy, C.; Ellwood, M.D.F. |
| Title |
Epiphytic suspended soils from Borneo and Amazonia differ in their microbial community composition |
Type |
Journal Article |
| Year |
2020 |
Publication |
Acta Oecologica |
Abbreviated Journal |
Acta Oecol. |
| Volume |
106 |
Issue |
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Pages |
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| Keywords |
Asplenium; Bacteria; Borneo; Bromeliaceae; Canopy; French Guiana; Fungi; Plfa; Rainforest; bacterium; community composition; epiphyte; fungus; microbial community; niche; relative abundance; soil microorganism; species diversity; tropical forest; Amazonia; Borneo; Danum Valley; East Malaysia; French Guiana; Malaysia; Nouragues; Sabah; Asplenium; Asplenium nidus; Aves; Bacteria (microorganisms); Bromeliaceae; Fungi |
| Abstract |
Microbial organisms support the high species diversity associated with tropical forests, and likely drive functional processes, but microorganisms found in rainforest canopies are not well understood. We quantified the microbial diversity of suspended soils from two classical epiphytic model systems (bromeliads & bird's nest ferns) across two localities: the Nouragues Reserve in French Guiana and Danum Valley in Malaysian Borneo. Non-epiphytic suspended soils were also collected as controls at the Nouragues Reserve. Effects of epiphyte type and sample location on microbial community composition were determined using Phospholipid Fatty Acid (PLFA) analysis. Total microbial biomass remained constant across the suspended soil types, but PLFA peaks denoting the relative abundance of different microbes varied between bromeliads, bird's nest ferns and non-epiphytic control soils. Suspended soils associated with bird's nest ferns from Borneo contained a microbial community significantly different in composition from those of congeneric bird's nest ferns from Amazonia, due to shifts in the relative abundance of fungi and bacteria. Our findings reveal that epiphytes create convergent niches for microorganisms in tropical canopies, while highlighting the sensitive nature of suspended soil microbial communities. © 2020 Elsevier Masson SAS |
| Address |
20 Baily Place, Cheswick, Bristol, BS16 1BG, United Kingdom |
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Elsevier B.V. |
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1146609x (Issn) |
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no |
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EcoFoG @ webmaster @ |
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959 |
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Male, P.J.G.; Loiseau, A.; Estoup, A.; Quilichini, A.; Orivel, J. |
| Title |
Characterization of polymorphic microsatellite loci in the neotropical plant-ant Allomerus decemarticulatus (Formicidae: Myrmicinae) and multiplexing with other microsatellites from the ant subfamily Myrmicinae |
Type |
Journal Article |
| Year |
2010 |
Publication |
European Journal of Entomology |
Abbreviated Journal |
Eur. J. Entomol. |
| Volume |
107 |
Issue |
4 |
Pages |
673-675 |
| Keywords |
Hymenoptera; Formicidae; Myrmicinae; Allomerus; ant-plant mutualism; microsatellites; plant-ant |
| Abstract |
Five polymorphic microsatellite loci of the arboreal ant Allomerus decemarticulatus (Myrmicinae) were isolated and characterized. The amplification and polymorphism of seven additional microsatellite loci, previously developed for the ant species A. octoarticulatus and Wasmannia auropunctata, were also tested and the amplification conditions necessary for genotyping the complete set of 12 multiplexed markers in A. decemarticulatus determined. The number of alleles per locus ranged from three to 15 and observed heterozygosity varied front 0.09 to 0.95. Cross-species amplification of these loci was also successfully achieved in additional species of the same ant subfamily, Myrmicinae. This set of microsatellite markers will be used in studies on the mating system and population genetic structure of Myrmicinae in general and A. decemarticulatus in particular. |
| Address |
[Male, Pierre-Jean G.; Orivel, Jerome] Univ Toulouse, Lab Evolut & Divers Biol EDB, UMR 5174, F-31062 Toulouse 9, France, Email: pjmale@cict.fr |
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CZECH ACAD SCI, INST ENTOMOLOGY |
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1210-5759 |
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| Notes |
ISI:000284434300020 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
19 |
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Bertani, S.; Houel, E.; Stien, D.; Chevolot, L.; Jullian, V.; Garavito, G.; Bourdy, G.; Deharo, E. |
| Title |
Simalikalactone D is responsible for the antimalarial properties of an amazonian traditional remedy made with Quassia amara L. (Simaroubaceae) |
Type |
Journal Article |
| Year |
2006 |
Publication |
Journal of Ethnopharmacology |
Abbreviated Journal |
J. Ethnopharmacol. |
| Volume |
108 |
Issue |
1 |
Pages |
155-157 |
| Keywords |
antimalarial; Quassia amara; quassinoids; simalikalactone D; traditional medicine |
| Abstract |
French Guiana (North-East Amazonia) records high malaria incidence rates. The traditional antimalarial remedy most widespread there is a simple tea made out from Quassia amara L. leaves (Simaroubaceae). This herbal tea displays an excellent antimalarial activity both in vitro and in vivo. A known quassinoid, simalikalactone D (SkD), was identified as the active compound, with an IC50 value of 10 nM against FeB1 Plasmodium falciparum chloroquine resistant strain in vitro. Lastly, it inhibits 50% of Plasmodium yoelii yoelii rodent malaria parasite at 3.7 mg/kg/day in vivo by oral route. These findings confirm the traditional use of this herbal tea. (c) 2006 Elsevier Ireland Ltd. All rights reserved. |
| Address |
Univ Toulouse 3, UMR 152, Ctr IRD, F-97323 Cayenne, French Guiana, Email: deharo@cayenne.ird.fr |
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ELSEVIER IRELAND LTD |
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Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
0378-8741 |
ISBN |
|
Medium |
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| Area |
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Expedition |
|
Conference |
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| Notes |
ISI:000241573000023 |
Approved |
no |
| Call Number |
EcoFoG @ eric.marcon @ |
Serial |
173 |
| Permanent link to this record |
