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Houel, E.; Fleury, M.; Odonne, G.; Nardella, F.; Bourdy, G.; Vonthron-Sénécheau, C.; Villa, P.; Obrecht, A.; Eparvier, V.; Deharo, E.; Stien, D. |
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Title |
Antiplasmodial and anti-inflammatory effects of an antimalarial remedy from the Wayana Amerindians, French Guiana: Takamalaimë (Psidium acutangulum Mart. ex DC., Myrtaceae) |
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Journal Article |
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Year |
2015 |
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Journal of Ethnopharmacology |
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166 |
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279-285 |
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Psidium acutangulum; Plasmodium; Cytokines; Antimalarial; French Guiana; Traditional medicine |
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Abstract |
Ethnopharmacological relevance:
Field investigations highlighted the use of Psidium acutangulum Mart. ex DC (syn. P. persoonii McVaugh), a small tree used by the Wayana Amerindians in Twenke–Taluhwen and Antecume–Pata, French Guiana, for the treatment of malaria, and administered either orally in the form of a decoction or applied externally over the whole body. This use appears limited to the Wayana cultural group in French Guiana and has never been reported anywhere else. Our goal was to evaluate the antimalarial and anti-inflammatory activities of a P. acutangulum decoction to explain the good reputation of this remedy.
Materials and methods:
Interviews with the Wayana inhabitants of Twenke–Taluhwen and Antecume–Pata were conducted within the TRAMAZ project according to the TRAMIL methodology, which is based on a quantitative and qualitative analysis of medicinal plant uses. A decoction of dried aerial parts of P. acutangulum was prepared in consistency with the Wayana recipe. In vitro antiplasmodial assays were performed on chloroquine-resistant FcB1 ([3H]-hypoxanthine bioassay) and 7G8 (pLDH bioassay) P. falciparum strains and on chloroquine sensitive NF54 ([3H]-hypoxanthine bioassay) P. falciparum strain. In vitro anti-inflammatory activity (IL-1β, IL-6, IL-8, TNFα) was evaluated on LPS-stimulated human PBMC and NO secretion inhibition was measured on LPS stimulated RAW murine macrophages. Cytotoxicity of the decoction was measured on L6 mammalian cells, PBMCs, and RAW cells. A preliminary evaluation of the in vivo antimalarial activity of the decoction, administered orally twice daily, was assessed by the classical four-day suppressive test against P. berghei NK65 in mice.
Results:
The decoction displayed a good antiplasmodial activity in vitro against the three tested strains, regardless to the bioassay used, with IC50 values of 3.3 µg/mL and 10.3 µg/mL against P. falciparum FcB1 and NF54, respectively and 19.0 µg/mL against P. falciparum 7G8. It also exhibited significant anti-inflammatory activity in vitro in a dose dependent manner. At a concentration of 50 µg/mL, the decoction inhibited the secretion of the following pro-inflammatory cytokines: TNFα (−18%), IL-1β (−58%), IL-6 (−32%), IL-8 (−21%). It also exhibited a mild NO secretion inhibition (−13%) at the same concentration. The decoction was non-cytotoxic against L6 cells (IC50>100 µg/mL), RAW cells and PBMC. In vivo, 150 µL of the decoction given orally twice a day (equivalent to 350 mg/kg/day of dried extract) inhibited 39.7% average parasite growth, with more than 50% of inhibition in three mice over five. The absence of response for the two remaining mice, however, induced a strong standard deviation.
Conclusions:
This study highlighted the in vitro antiplasmodial activity of the decoction of P. acutangulum aerial parts, used by Wayana Amerindians from the Upper-Maroni in French Guiana in case of malaria. Its antioxidant and anti-inflammatory potential, which may help to explain its use against this disease, was demonstrated using models of artificially stimulated cells. |
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0378-8741 |
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EcoFoG @ webmaster @ |
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649 |
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Campillo, F.; Rakotozafy, R.; Rossi, V. |
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Title |
Parallel and interacting Markov chain Monte Carlo algorithm |
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Journal Article |
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Year |
2009 |
Publication |
Mathematics and Computers in Simulation |
Abbreviated Journal |
Math. Comput. Simul. |
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79 |
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12 |
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3424-3433 |
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Markov chain Monte Carlo method; Interacting chains; Hidden Markov model |
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In many situations it is important to be able to propose N independent realizations of a given distribution law. We propose a strategy for making N parallel Monte Carlo Markov chains (MCMC) interact in order to get an approximation of an independent N-sample of a given target law. In this method each individual chain proposes candidates for all other chains. We prove that the set of interacting chains is itself a MCMC method for the product of N target measures. Compared to independent parallel chains this method is more time consuming. but we show through examples that it possesses many advantages. This approach is applied to a biomass evolution model. (C) 2009 IMACS. Published by Elsevier B.V. All rights reserved. |
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[Rossi, Vivien] CIRAD, Res Unit, Montpellier, France, Email: Fabien.Campillo@inria.fr |
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ELSEVIER SCIENCE BV |
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0378-4754 |
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ISI:000269289100006 |
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EcoFoG @ eric.marcon @ |
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197 |
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Quilichini, A.; Macquart, D.; Barabe, D.; Albre, J.; Gibernau, M. |
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Title |
Reproduction of the West Mediterranean endemic Arum pictum (Araceae) on Corsica |
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Journal Article |
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Year |
2010 |
Publication |
Plant Systematics and Evolution |
Abbreviated Journal |
Plant Syst. Evol. |
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287 |
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3-4 |
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179-187 |
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Floral volatiles; Ocimene; Insect pollination; Reproductive success; Sphaeroceridae; Thermogenesis |
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Pollination in the genus Arum appears to be in general a complex deceptive pollination process. The genus Arum is composed of 28 species, all belonging to the subgenus Arum, except A. pictum, the only species of the subgenus Gymnomesium, which is basal and sister to all other Arum species. The aim of this paper is to document the pollination ecology of the insular Arum pictum, the only Arum species to flower in autumn, on the island of Corsica (France). The anthesis cycle of A. pictum occurs during the day, attracting sphaerocerid flies and staphylinid beetles early in the morning and late in the afternoon of the first day. The pollen is released from the anthers early in the morning of the second day before the departure of the insects. Its thermogenic cycle matches the anthesis cycle with an original and unique, bimodal temperature pattern of the appendix (morning and afternoon), contrary to the unimodal pattern found in all other studied Arum species. Data from reproductive success and seed sets suggest that sexual reproduction in this species is limited by pollen (e.g. attracting lured insects) rather than by resources. The biology of this Western Mediterranean species appears to be different from other Western European Arum and close to some Eastern Mediterranean species. Further studies are needed to establish whether Arum pictum represents some ancestral stage or whether its peculiar biological traits are adapted to its insular distribution. |
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[Quilichini, Angelique; Gibernau, Marc] CNRS, UMR 8172, Ecole Forets Guyane, F-97387 Kourou, France, Email: marc.gibernau@ecofog.gf |
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SPRINGER WIEN |
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0378-2697 |
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ISI:000279479800008 |
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EcoFoG @ eric.marcon @ |
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51 |
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Barabe, D.; Lacroix, C.; Gibernau, M. |
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Title |
Floral development of Urospatha: merosity and phylogeny in the Lasioideae (Araceae) |
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Journal Article |
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2011 |
Publication |
Plant Systematics and Evolution |
Abbreviated Journal |
Plant Syst. Evol. |
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296 |
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1-2 |
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41-50 |
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Inflorescence; Homeosis; Angiosperms; Systematic; Morphogenetic constraints |
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In this paper we study merosity in the genus Urospatha within the framework of a resolved phylogeny of the Araceae. We analyse how a transition from dimerous or tetramerous merosity to pentamerous or hexamerous merosity can occur developmentally in the Lasioideae. In Urospatha, initiation of floral primordia along the inflorescence is acropetal, while development of flowers is basipetal. This indicates the presence of two distinct phases in the development of the Urospatha inflorescence. The first phase corresponds to initiation of flowers and establishment of the phyllotactic pattern, and the second phase to differentiation of floral organs. Urospatha is characterized by the presence of trimerous, tetramerous, pentamerous and rarely hexamerous flowers. In all types of flowers, the stamens are closely associated and opposite to the tepals. Pentamerous flowers are formed by addition of a sector comprising a stamen and tepal. Likewise, in the case of hexamerous flowers, two sectors are added. In the Lasioideae, the increase in the number of tepals and stamens is linked with two developmental processes that have appeared independently in the subfamily: (1) addition of one or two stamen-petal sectors (Anaphyllopsis and Urospatha), and (2) independent increase in the number of tepals and stamens on whorls, more or less organized and inserted in alternate position (Dracontium). Tetramerous whorls as they occur in basal Lasioideae would be homologous to two dimerous whorls from an evolutionary point of view. |
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[Barabe, D; Gibernau, M] CNRS UMR Ecol Forets Guyane 8172, F-97387 Kourou, France, Email: denis.barabe@umontreal.ca |
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Springer Wien |
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0378-2697 |
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WOS:000294201300004 |
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EcoFoG @ webmaster @ |
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338 |
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Jabiol, J.; Corbara, B.; Dejean, A.; Cereghino, R. |
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Title |
Structure of aquatic insect communities in tank-bromeliads in a East-Amazonian rainforest in French Guiana |
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Journal Article |
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2009 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
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257 |
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1 |
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351-360 |
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Bromeliaceae; Classification; Community structure; Insects; Microcosms; Neural networks; Nouragues; Phytotelmata; Species richness |
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Tank-bromeliads are discrete habitats which contain distinct aquatic communities, and which commonly occur in the neotropics. Because they span a broad range of ecological gradients in terms of habitat structure and amount of resources, researchers study the associations between the biodiversity of communities and these gradients in rainforests, where the very high species richness and densities within other continuous habitats makes it difficult to quantify animal communities. We analysed the diversity of aquatic insect communities in relation to different tank-bromeliad species in a primary rainforest (French Guiana) using artificial intelligence and complex optimization techniques to classify communities and model their determinants. First, the self-organizing map (neural network) was used to classify 158 bromeliads according to the quantitative structure of the insect communities. Catopsis berteroniana and Guzmania lingulata formed separate clusters of plants on the virtual map, while Vriesea splendens, Vriesea pleiosticha and Aechmea melinonii were grouped together in the remaining clusters. Some insect taxa occurred in all bromeliads, while other taxa were specific to a given species. Second, general linear modelling allowed us to specify the influence of the bromeliad species; water volume and volume of fine particulate organic matter inside of the tank; elevation above the ground; and sampling site on taxonomic richness and insect abundance. The number of taxa and individuals per plant increased with greater water volume, but the slope of the relationships depended on the bromeliad species. The significant influence of bromeliad species suggested that at similar water volumes different plant species had different taxon richness and insect abundance. Greater amounts of fine particulate organic matter were detrimental to community diversity in the tanks, probably because they decreased available space by clogging it and/or affected oxygen concentrations. The influence of tank-bromeliad species on the aquatic insect community was primarily related to their physical (and probably chemical) features rather than to species-specific associations sensu stricto. The classification of bromeliads with respect to animal species is likely to provide referential schemes for those biodiversity patterns to be expected under certain conditions, and may help to target model communities for subsequent experimental research. (C) 2008 Elsevier B,V. All rights reserved. |
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Address |
[Jabiol, J.; Cereghino, R.] Univ Toulouse 3, Ecolab, Lab Ecol Fonctionnelle, CNRS,UMR 5245, F-31062 Toulouse 9, France, Email: cereghin@cict.fr |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000261856000038 |
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EcoFoG @ eric.marcon @ |
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124 |
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Scotti, I.; Gugerli, F.; Pastorelli, R.; Sebastiani, F.; Vendramin, G.G. |
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Title |
Maternally and paternally inherited molecular markers elucidate population patterns and inferred dispersal processes on a small scale within a subalpine stand of Norway spruce (Picea abies [L.] Karst.) |
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Journal Article |
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Year |
2008 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
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Volume |
255 |
Issue |
11 |
Pages |
3806-3812 |
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Keywords |
chloroplast microsatellites; mitochondrial minisatellites; pollen/seed dispersal; demography; spatial autocorrelation |
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The within-population spatial structure of genetic diversity is shaped by demographic processes, including historical accidents such as forest perturbations. Information drawn from the analysis of the spatial distribution of genetic diversity is therefore inherently linked to demographic-historical processes that ultimately determine the fate of populations. All adult trees and saplings in a 1.4-ha plot within a mixed Norway spruce (Picea abies [L.] Karst) stand were characterised by means of chloroplast (paternally inherited) markers, and a large sub-sample of these were genotyped at mitochondrial (maternally inherited) molecular markers. These data were used to analyse the spatial distribution of genetic variation and to compare the patterns corresponding to the two marker types. The plot presented non-homogeneous local stem density in the younger cohorts, and the indirect effect of this source of variation on the spatial genetic structure was investigated. Results suggest that (i) spatially limited seed dispersal induced patchiness in genotype distribution, while pollen flow had a homogenising effect; (ii) deviations from random spatial structure were stronger in the demographically most stable portions of the stand, while they were weaker where sudden bursts of regeneration occurred; (iii) spatially overlapping adult and sapling cohorts displayed the same spatial genetic structure (stronger on stable areas, weaker in portions of the stand undergoing events of intense regeneration), which was substantiated by the influence of local demographic processes. Regeneration dynamics as modulated by demography thus influences the distribution of genetic diversity within the stand both in the younger life stages and in the adult population. (C) 2008 Elsevier B.V. All rights reserved. |
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[Scotti, I.] INRA, UMR 0745, ECOFOG, F-97387 Kourou, France, Email: ivan.scotti@kourou.cirad.fr |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000257019100019 |
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EcoFoG @ eric.marcon @ |
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137 |
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Rockwell, C.A.; Kainer, K.A.; Staudhammer, C.L.; Baraloto, C. |
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Title |
Future crop tree damage in a certified community forest in southwestern Amazonia |
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Journal Article |
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Year |
2007 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
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Volume |
242 |
Issue |
2-3 |
Pages |
108-118 |
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Keywords |
bamboo; community forest management; forest certification; Guadua; liana; marking; reduced-impact logging; RIL; timber management; tropical forest |
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Abstract |
Field studies in Acre, Brazil assessed logging impacts of a certified community timber management project. The main objectives of the study were: (1) to determine if damage incidence to future crop trees (FCTs; >= 20 cm diameter at breast height (dbh)) differs between (a) forest with and without bamboo (Guadua spp.), and (b) trees with and without lianas; (2) to what extent harvesting can be conducted more intensely (m(3)ha(-1)), without incurring greater FCT damage; and (3) to what extent marking diminishes FCT damage. Full inventories of FCTs of 50 commercial species complexes were conducted before and after logging in 50 m-radius zones of impact around each designated harvest tree in three 10 ha (200 m x 500 m) logging blocks. We also mapped all forested areas potentially influenced by logging, including skid trails, log landings and felling gaps, throughout the 30 ha logged. More than 28% of the forest area was disturbed by logging, with 12.1% in skid trails and 16.8% in gap clearings, indicating that the forest gap mosaic can be significantly altered even when reduced-impact logging guidelines are followed. Overall, 15% of FCTs inventoried were damaged. Damage rates were not significantly reduced by marking treatment, location in bamboo-dominated forest, or liana load on FCT damage. Harvest intensity did not influence the probability of FCT damage. For future studies, it would be prudent to address impacts of timber extraction on other livelihood activities, such as non-timber forest product collection, particularly in such regions as the Brazilian Amazon, where many communities are attempting to integrate a suite of income-generating activities. (C) 2007 Elsevier B.V. All rights reserved. |
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Univ Florida, Sch Forest Resources & Conservat, Gainesville, FL 32611 USA, Email: crockwel@ufl.edu |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000246268100003 |
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EcoFoG @ eric.marcon @ |
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217 |
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Author |
Rockwell, C.; Kainer, K.A.; Marcondes, N.; Baraloto, C. |
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Title |
Ecological limitations of reduced-impact logging at the smallholder scale |
Type |
Journal Article |
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Year |
2007 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
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Volume |
238 |
Issue |
1-3 |
Pages |
365-374 |
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Keywords |
community forest management; forest inventories; liana cutting; sustained yield; timber management; tropical forest conservation |
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Reduced-impact logging (RIL) has many demonstrated benefits to the industrial logging operations for which they were developed. It is less clear whether these gains remain consistent in smallholder forest systems that increasingly play an important role in global conservation and that target a broader suite of outputs in their management schemes. We evaluate potential ecological consequences of five RIL components (pre-harvest inventories, harvest intensity, cutting cycles, skid trail planning, and liana cutting) when applied to small-scale operations in the Brazilian Amazon and provide suggestions for modifications to RIL guidelines for smallholder systems. Rapid assessment inventories of the entire landholding should be a part of crop tree selection to minimize inbreeding and recruitment failure. Additionally, while community-based taxonomists accurately identify species to common names, botanical samples must be verified with herbarium specimens to avoid market and ecological problems when multiple species share a single common name. We advocate that smallholder managers move beyond an emphasis on RIL guidelines, while still incorporating its basic tenets into practical application. Based on our analysis, this would include evaluating benefits of particular RIL components and assessing potential advantages that smallholders have over industrial operations. We suggest incorporating anthropogenically-generated forest patches of varying sizes and successional stages into a more formalized management system, incorporating and expanding on traditional ecological knowledge acquired over generations, and integrating enrichment plantings and tending of regeneration. (c) 2006 Published by Elsevier B.V. |
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Univ Florida, Sch Forest Resources & Conservat, Gainesville, FL 32611 USA, Email: crockwel@ufl.edu |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000243761700033 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
220 |
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Author |
Gourlet-Fleury, S.; Comu, G.; Jesel, S.; Dessard, H.; Jourget, J.G.; Blanc, L.; Picard, N. |
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Title |
Using models to predict recovery and assess tree species vulnerability in logged tropical forests: A case study from French Guiana |
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Journal Article |
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Year |
2005 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
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Volume |
209 |
Issue |
1-2 |
Pages |
69-86 |
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Keywords |
matrix model; individual-based spatially explicit model; regeneration; recruitment; long-term population dynamics |
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Abstract |
A major challenge for forest managers is to define the optimal cutting cycle to ensure that the resource is sustained in the long term. Matrix models of forest dynamics allow time-projection of diameter-class distributions and thus assessment of the time needed, after logging, to recover a given part of the exploitable stock. They are easy to build and they only require, as input variables, the diameter structure of the population(s) under scope. However, such models are based on a coarse description of tree population dynamics and must be used with caution. In particular, as trees are only described from a diameter threshold (usually 10 cm dbh), recruitment of a new tree cannot be linked with the preceding generation since too much time elapsed between seed dispersal and the installation of a 10-cm recruit. This causes predictions of matrix models to be highly questionable in the long term when ingrowth to larger dbh classes greatly depends on the way recruitment has been modelled. We used a case study from French Guiana to test whether or not a simple matrix model is reliable enough to help forest managers choose between management alternatives. We focused on the major timber species Dicorynia guianensis Amshoff (Caesalpiniaceae) harvested under a selective cutting regime. We compared predictions of D. guianensis stock recovery in the short and long term provided by two models: StoMat, a non-regulated matrix model, and SELVA, a single-tree distance dependent model explicitly simulating the entire species life cycle. Both models were independently calibrated on data from Paracou permanent sample plots. We showed that: (i) the short-term recovery of the exploitable stock predicted by StoMat is reliable for a large range of disturbance conditions; (ii) recruitment implementation in StoMat does not influence projections until the third felling cycle; (iii) for shared initial stand conditions SELVA and StoMat give consistent mid- and long-term predictions: the simple recruitment model used into StoMat could efficiently summarise the regeneration processes of the species under low felling intensity. Our results indicate that the current felling regime used in French Guiana may not be sustainable on a long-term basis. In any case, no more than 60% of the initial stock would be recovered after logging. We conclude that simple models can provide as reliable predictions as more complicated ones. They may be sufficient to assess the recovery of a species' exploitable stock even in the long term, or at least assess the (un)sustainability of particular harvesting regimes. (c) 2005 Elsevier B.V. All rights reserved. |
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CIRAD, Dept Forets, F-34398 Montpellier 5, France, Email: sylvie.gourlet-fleury@cirad.fr |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000228504600007 |
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EcoFoG @ eric.marcon @ |
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257 |
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Konig, A.O.; Ziegenhagen, B.; van Dam, B.C.; Csaikl, U.M.; Coart, E.; Degen, B.; Burg, K.; de Vries, S.M.G.; Petit, R.J. |
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Chloroplast DNA variation of oaks in western Central Europe and genetic consequences of human influences |
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Journal Article |
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2002 |
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Forest Ecology and Management |
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For. Ecol. Manage. |
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156 |
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1-3 |
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147-166 |
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Q. robur; Q. petraea; PCR-RFLPs; haplotypes; spatial genetic patterns; genetic differentiation; deforestation; seed transfer |
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Oak chloroplast DNA (cpDNA) variation was studied in a grid-based inventory in western Central Europe, including Belgium, The Netherlands, Luxembourg, Germany, the Czech Republic, and the northern parts of Upper and Lower Austria. A total of 2155 trees representing 426 populations of Quercus robur L. and Q. petraea (Matt.) Liebl. were screened for polymorphism in up to four PCR-amplified cpDNA fragments. Eleven haplotypes belonging to four lineages were detected; these lineages were formerly restricted to glacial refugia in the Iberian Peninsula, the Apennine Peninsula and the Balkan Peninsula. The haplotypes originating from the Apennines are particularly well represented in the study region, but there is also a significant contribution from the other refugia, which explain the high overall level of cpDNA diversity. The strong human impact in western Central Europe during the past centuries, which has resulted in the clearance of most forests, was followed by reforestation, sometimes involving seed transfers. Despite this strong human impact, broad geographic patterns of lineages and haplotypes could still be detected. To evaluate further the consequences of the former human activities on the present day oak cpDNA genetic structure, four regions where increasingly strong human impact was anticipated (ranging from hilly regions in southern Germany to roadsides plantations in The Netherlands) were selected. There, a comparison of the levels of intrapopulation cpDNA diversity and spatial structuring was made. Over the whole area, within stand diversity was significantly higher in Q. robur than in Q. petraea (h(S) = 0.24 vs. 0.16). Since total diversity is identical for both species, this results in a significantly lower level of fixation for Q. robur than for Q. petraea (G(ST) = 0.68 vs. 0.79). The analyses also reveal a decrease of fixation with increasing human impact on oak populations. The Dutch roadside plantations (Q. robur) exhibit a very low level of fixation (G(ST) = 0.28) as compared to Q. petraea in southern Germany (G(ST) = 0.91). The significance of the spatial genetic structure was tested using geostatistical methods. For the complete data set, a strong spatial genetic structure is confirmed, with higher than average genetic similarities between populations distant from up to 270 km, whereas there is no spatial structure in the roadside plantations in The Netherlands or in the northern German lowlands. These results should help to differentiate introduced from autochthonous populations, and provide a framework for the identification of the geographic origin of seed lots. (C) 2002 Elsevier Science B.V. All rights reserved. |
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Inst FOrstgenet & Forstpflanzenzuchtung, BFH, D-22927 Grosshansdorf, Germany |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000174149400010 |
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EcoFoG @ eric.marcon @ |
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276 |
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