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Farjalla, V.F.; González, A.L.; Céréghino, R.; Dezerald, O.; Marino, N.A.C.; Piccoli, G.C.O.; Richardson, B.A.; Richardson, M.J.; Romero, G.Q.; Srivastava, D.S. |
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Title |
Terrestrial support of aquatic food webs depends on light inputs: A geographically-replicated test using tank bromeliads |
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Journal Article |
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2016 |
Publication |
Ecology |
Abbreviated Journal |
Ecology |
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97 |
Issue |
8 |
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2147-2156 |
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Allochthonous carbon; Allochthony; Aquatic food webs; Autochthonous carbon; Autochthony; Natural microcosms; Stable isotopic analysis; Tank bromeliads; Tropics |
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Food webs of freshwater ecosystems can be subsidized by allochthonous resources. However, it is still unknown which environmental factors regulate the relative consumption of allochthonous resources in relation to autochthonous resources. Here, we evaluated the importance of allochthonous resources (litterfall) for the aquatic food webs in Neotropical tank bromeliads, a naturally replicated aquatic microcosm. Aquatic invertebrates were sampled in more than 100 bromeliads within either open or shaded habitats and within five geographically distinct sites located in four different countries. Using stable isotope analyses, we determined that allochthonous sources comprised 74% (±17%) of the food resources of aquatic invertebrates. However, the allochthonous contribution to aquatic invertebrates strongly decreased from shaded to open habitats, as light incidence increased in the tanks. The density of detritus in the tanks had no impact on the importance of allochthonous sources to aquatic invertebrates. This overall pattern held for all invertebrates, irrespective of the taxonomic or functional group to which they belonged. We concluded that, over a broad geographic range, aquatic food webs of tank bromeliads are mostly allochthonous-based, but the relative importance of allochthonous subsidies decreases when light incidence favors autochthonous primary production. These results suggest that, for other freshwater systems, some of the between-study variation in the importance of allochthonous subsidies may similarly be driven by the relative availability of autochthonous resources. © 2016 by the Ecological Society of America. |
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Department of Animal Biology, Institute of Biology, University of Campinas (UNICAMP), PO Box 6109, Campinas-SP, Brazil |
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Export Date: 1 September 2016 |
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EcoFoG @ webmaster @ |
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687 |
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Herault, B.; Thoen, D. |
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Title |
Diversity of plant assemblages in isolated depressional wetlands from Central-Western Europe |
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Journal Article |
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2008 |
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Biodiversity and Conservation |
Abbreviated Journal |
Biodivers. Conserv. |
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17 |
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9 |
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2169-2183 |
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closed depressions; connectivity; fens; forest; grassland; habitat area; landscape matrix |
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A closed depression is defined as a geomorphologic element where a sediment depository is encircled by hillslopes. Despite the fact that closed depressions are often the only stagnant water points in many European landscapes, few ecological researches on their plant assemblages have been done. The main goal of this study was to give first results of the environmental factors responsible for the vegetation composition, richness and rarity in the closed depressions of the Lorraine biogeographical district (Belgium, France and grand-duche de Luxembourg). We surveyed for plant presence 85 forest and 77 grassland closed depressions. For each site, wetland area, local environmental factors and regional connectivities registered. For each species, the Ellenberg values were compiled. To investigate the main source of variation in species composition and in species richness (including richness in rare species), Non-metric Multidimensional Scaling analyses and Generalized Linear Models were respectively used. Species pools in forest (forest and preforest species) and in grassland (bog plants, pioneers, helophytes) were quite different. In both landscapes, a gradient from plants typical of basic high-productive soils to plants typical of acid low-productive soils reflects a shared successional gradient. The accumulation of organic matter allowed the establishment of Sphagnum spp., which slowly acidified the soil and thus acted as ecosystem engineers for the arrival of bog plants. Moreover, the species composition was additionally driven by the plant light tolerance in forests and by the plant water requirements in grasslands. Mechanisms of species accumulation (increase in species richness) were different in forests and in grasslands: respectively related to the plant light tolerance and to the wetland area. At the regional level, the averaged soil productivity was negatively related to the richness in rare species. Indeed, perennial highly-competitive plants such as Glyceria spp., Iris pseudacorus or Urtica dioica impeded the establishment of smaller and rarer species. At the habitat level, isolated closed depressions (due to either low connectivity or low grazing pressure) have more habitat rare species, giving evidences of dispersal limitation in plant assemblages of closed depressions. |
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[Herault, Bruno] Inst Bot, Ctr Ecol Vegetale & Hydrol, F-67083 Strasbourg, France, Email: bruno.herault@cirad.fr |
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SPRINGER |
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0960-3115 |
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ISI:000257486400008 |
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EcoFoG @ eric.marcon @ |
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135 |
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Woolfit, M.; Iturbe-Ormaetxe, I.; Brownlie, J.C.; Walker, T.; Riegler, M.; Seleznev, A.; Popovici, J.; Rancès, E.; Wee, B.A.; Pavlides, J.; Sullivan, M.J.; Beatson, S.A.; Lane, A.; Sidhu, M.; McMeniman, C.J.; McGraw, E.A.; O'Neill, S.L. |
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Title |
Genomic evolution of the pathogenic Wolbachia strain, wMelPop |
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Journal Article |
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2013 |
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Genome Biology and Evolution |
Abbreviated Journal |
Genome Biolog. Evol. |
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5 |
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11 |
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2189-2204 |
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Endosymbiont; Evolution; Genomics; Wolbachia |
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Most strains of the widespread endosymbiotic bacterium Wolbachia pipientis are benign or behave as reproductive parasites. The pathogenic strain wMelPop is a striking exception, however: it overreplicates in its insect hosts and causes severe life shortening. The mechanism of this pathogenesis is currently unknown. We have sequenced the genomes of three variants of wMelPop and of the closely related nonpathogenic strain wMelCS. We show that the genomes of wMelCS and wMelPop appear to be identical in the nonrepeat regions of the genome and differ detectably only by the triplication of a 19-kb region that is unlikely to be associated with life shortening, demonstrating that dramatic differences in the host phenotype caused by this endosymbiont may be the result of only minor genetic changes. We also compare the genomes of the original wMelPop strain from Drosophila melanogaster and two sequentialderivatives, wMelPop-CLA and wMelPop-PGYP. To develop wMelPop as a novel biocontrol agent, it was first transinfected into and passaged in mosquito cell lines for approximately 3.5 years, generating wMelPop-CLA. This cell line-passaged strain was then transinfected into Aedesaegypti mosquitoes, creating wMelPop-PGYP,which wassequenced after 4yearsin the insecthost. We observe a rapid burst of genomic changes during cell line passaging, but no further mutations were detected after transinfection into mosquitoes, indicating either that host preadaptation had occurred in cell lines, that cell lines are a more selectively permissive environment than animal hosts, or both. Our results provide valuable data on the rates of genomic and phenotypic change in Wolbachia associated with host shifts over short time scales. © The Author(s) 2013. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. |
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Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia |
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17596653 (Issn) |
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Export Date: 9 February 2014; Source: Scopus; Language of Original Document: English; Correspondence Address: O'Neill, S.L.; School of Biological Sciences, Monash University, Clayton, VIC, Australia; email: scott.oneill@monash.edu; Funding Details: NIH, National Institutes of Health |
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EcoFoG @ webmaster @ |
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527 |
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Duplais, C.; Estevez, Y. |
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Title |
Tandem Biocatalysis Unlocks the Challenging de Novo Production of Plant Natural Products |
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Journal Article |
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Year |
2017 |
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ChemBioChem |
Abbreviated Journal |
ChemBioChem |
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18 |
Issue |
22 |
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2192-2195 |
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alkaloids; biosynthesis; enzyme catalysis; protein engineering; terpenes |
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Intimate partnership: Knowledge of the biocatalytic cascades in different cellular compartments is limited, but deciphering these systems in nature can be used to inspire synthetic strategies. Two studies report new insights into the biosynthesis of alkaloids and sesterterpenoids in plants. This highlight presents these novel biotransformations to illustrate how tandem biocatalysis can impact the future of natural product production. |
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1439-7633 |
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EcoFoG @ webmaster @ |
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780 |
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Imbert, D. |
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Hurricane disturbance and forest dynamics in east Caribbean mangroves |
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Journal Article |
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2018 |
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Ecosphere |
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9 |
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7 |
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e02231 |
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Caribbean; forest recovery; high-energy storms; mangrove; resilience; resistance; Special Feature: High-Energy Storms |
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Despite low plant diversity and structural simplicity, mangroves offer various ecosystem services to local human communities, including sheltering coastal social-ecological systems from high-energy storm damage. The expected increasing intensity of hurricanes due to climate change raises questions concerning the capacity of mangroves to resist and recover from such disturbances. Herein, this study contributes to a better understanding of (1) the relation between storm intensity and damage to mangrove vegetation, (2) the contributions of species-specific as well as stand-specific components of mangrove vegetation to ecosystem resistance, and (3) the recovery of pre-hurricane forest structure through time. The first two issues have been addressed using a stand-level approach implemented at two east Caribbean mangrove sites in response to three storm events. The third was addressed through a 23-yr survey of forest recovery following the passage of a high-energy storm across one of the two study sites. Generally, hurricane damage was primarily controlled by wind velocity, followed by the hydro-geomorphic context of mangrove forests and species-specific composition, respectively. The relationship between damage to trees and wind velocity evidenced a sigmoidal trend, with a maximum slope at a wind velocity averaging 130 and 180 km/h for higher vs. lower canopy stands, respectively. The red mangrove, Rhizophora mangle, was significantly less resistant to hurricane damage than was the black mangrove, Avicennia germinans. Unlike the fringe and scrub stands, inner, tall-canopy stands fully recovered by the end of the study (23 yr). These stands were more resilient because of their growth performances. Finally, the time for east Caribbean mangroves to recover from high-energy storms seems to fall within the range of the average return time of such disturbances. This may prevent such ecosystems from ever reaching a steady state. |
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Laboratoire de Biologie Végétale, UMR EcoFoG, BP 592, Université des Antilles, Pointe-à-Pitre Cedex, 97159, France |
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Export Date: 17 September 2018 |
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EcoFoG @ webmaster @ |
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819 |
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Maréchaux, I.; Bonal, D.; Bartlett, M.K.; Burban, B.; Coste, S.; Courtois, E.A.; Dulormne, M.; Goret, J.-Y.; Mira, E.; Mirabel, A.; Sack, L.; Stahl, C.; Chave, J. |
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Dry-season decline in tree sapflux is correlated with leaf turgor loss point in a tropical rainforest |
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Journal Article |
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2018 |
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Functional Ecology |
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Funct Ecol |
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32 |
Issue |
10 |
Pages |
2285-2297 |
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drought tolerance; hydraulic conductance; sap flow; sapflux density; tropical trees; turgor loss point; water potential; wilting point |
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Water availability is a key determinant of forest ecosystem function and tree species distributions. While droughts are increasing in frequency in many ecosystems, including in the tropics, plant responses to water supply vary with species and drought intensity and are therefore difficult to model. Based on physiological first principles, we hypothesized that trees with a lower turgor loss point (pi-tlp), that is, a more negative leaf water potential at wilting, would maintain water transport for longer into a dry season. We measured sapflux density of 22 mature trees of 10 species during a dry season in an Amazonian rainforest, quantified sapflux decline as soil water content decreased and tested its relationship to tree pi-tlp, size and leaf predawn and midday water potentials measured after the onset of the dry season. The measured trees varied strongly in the response of water use to the seasonal drought, with sapflux at the end of the dry season ranging from 37 to 117% (on average 83 +/- 5 %) of that at the beginning of the dry season. The decline of water transport as soil dried was correlated with tree pi-tlp (Spearman's rho > 0.63), but not with tree size or predawn and midday water potentials. Thus, trees with more drought-tolerant leaves better maintained water transport during the seasonal drought. Our study provides an explicit correlation between a trait, measurable at the leaf level, and whole-plant performance under drying conditions. Physiological traits such as pi-tlp can be used to assess and model higher scale processes in response to drying conditions. |
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Wiley/Blackwell (10.1111) |
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0269-8463 |
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doi: 10.1111/1365-2435.13188 |
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EcoFoG @ webmaster @ |
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830 |
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Solander, K.C.; Newman, B.D.; Carioca De Araujo, A.; Barnard, H.R.; Berry, Z.C.; Bonal, D.; Bretfeld, M.; Burban, B.; Candido, L.A.; Célleri, R.; Chambers, J.Q.; Christoffersen, B.O.; Detto, M.; Dorigo, W.A.; Ewers, B.E.; Ferreira, S.J.F.; Knohl, A.; Leung, L.R.; McDowell, N.G.; Miller, G.R.; Monteiro, M.T.F.; Moore, G.W.; Negron-Juarez, R.; Saleska, S.R.; Stiegler, C.; Tomasella, J.; Xu, C. |
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The pantropical response of soil moisture to El Niño |
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Journal Article |
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2020 |
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Hydrology and Earth System Sciences |
Abbreviated Journal |
Hydrol. Earth Syst. Sci. |
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24 |
Issue |
5 |
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2303-2322 |
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Cluster analysis; Oceanography; Soil moisture; Surface waters; Tropics; Climate anomalies; Clustered datum; Hydrologic changes; Land data assimilation systems; Sea surface temperature anomalies; Situ soil moistures; Tropical hydrologies; Tropical Pacific ocean; Soil surveys |
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The 2015–2016 El Niño event ranks as one of the most severe on record in terms of the magnitude and extent of sea surface temperature (SST) anomalies generated in the tropical Pacific Ocean. Corresponding global impacts on the climate were expected to rival, or even surpass, those of the 1997–1998 severe El Niño event, which had SST anomalies that were similar in size. However, the 2015–2016 event failed to meet expectations for hydrologic change in many areas, including those expected to receive well above normal precipitation. To better understand how climate anomalies during an El Niño event impact soil moisture, we investigate changes in soil moisture in the humid tropics (between ±25∘) during the three most recent super El Niño events of 1982–1983, 1997–1998 and 2015–2016, using data from the Global Land Data Assimilation System (GLDAS). First, we use in situ soil moisture observations obtained from 16 sites across five continents to validate and bias-correct estimates from GLDAS (r2=0.54). Next, we apply a k-means cluster analysis to the soil moisture estimates during the El Niño mature phase, resulting in four groups of clustered data. The strongest and most consistent decreases in soil moisture occur in the Amazon basin and maritime southeastern Asia, while the most consistent increases occur over eastern Africa. In addition, we compare changes in soil moisture to both precipitation and evapotranspiration, which showed a lack of agreement in the direction of change between these variables and soil moisture most prominently in the southern Amazon basin, the Sahel and mainland southeastern Asia. Our results can be used to improve estimates of spatiotemporal differences in El Niño impacts on soil moisture in tropical hydrology and ecosystem models at multiple scales. |
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Coordination of Research and Development, National Centre for Monitoring and Early Warning of Natural Disasters, Cachoeira Paulista, Brazil |
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Copernicus GmbH |
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10275606 (Issn) |
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Export Date: 29 May 2020; Correspondence Address: Solander, K.C.; Earth and Environmental Sciences, Los Alamos National LaboratoryUnited States; email: ksolander@lanl.gov |
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EcoFoG @ webmaster @ |
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934 |
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Sist, P.; Brown, N. |
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Silvicultural intensification for tropical forest conservation: a response to Fredericksen and Putz |
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2004 |
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Biodiversity and Conservation |
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13 |
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12 |
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2381-2385 |
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0960-3115 |
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WOS:000225691300011 |
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EcoFoG @ webmaster @ |
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308 |
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Gloor, M.; Phillips, O.L.; Lloyd, J.J.; Lewis, S.L.; Malhi, Y.; Baker, T.R.; Lopez-Gonzalez, G.; Peacock, J.; Almeida, S.; de Oliveira, A.C.A.; Alvarez, E.; Amaral, I.; Arroyo, L.; Aymard, G.; Banki, O.; Blanc, L.; Bonal, D.; Brando, P.; Chao, K.J.; Chave, J.; Davila, N.; Erwin, T.; Silva, J.; Di Fiore, A.; Feldpausch, T.R.; Freitas, A.; Herrera, R.; Higuchi, N.; Honorio, E.; Jimenez, E.; Killeen, T.; Laurance, W.; Mendoza, C.; Monteagudo, A.; Andrade, A.; Neill, D.; Nepstad, D.; Vargas, P.N.; Penuela, M.C.; Cruz, A.P.; Prieto, A.; Pitman, N.; Quesada, C.; Salomao, R.; Silveira, M.; Schwarz, M.; Stropp, J.; Ramirez, F.; Ramirez, H.; Rudas, A.; ter Steege, H.; Silva, N.; Torres, A.; Terborgh, J.; Vasquez, R.; van der Heijden, G. |
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Does the disturbance hypothesis explain the biomass increase in basin-wide Amazon forest plot data? |
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Journal Article |
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2009 |
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Global Change Biology |
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Glob. Change Biol. |
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15 |
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10 |
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2418-2430 |
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Amazon rainforest; carbon sink; disturbance; mortality; power law |
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Positive aboveground biomass trends have been reported from old-growth forests across the Amazon basin and hypothesized to reflect a large-scale response to exterior forcing. The result could, however, be an artefact due to a sampling bias induced by the nature of forest growth dynamics. Here, we characterize statistically the disturbance process in Amazon old-growth forests as recorded in 135 forest plots of the RAINFOR network up to 2006, and other independent research programmes, and explore the consequences of sampling artefacts using a data-based stochastic simulator. Over the observed range of annual aboveground biomass losses, standard statistical tests show that the distribution of biomass losses through mortality follow an exponential or near-identical Weibull probability distribution and not a power law as assumed by others. The simulator was parameterized using both an exponential disturbance probability distribution as well as a mixed exponential-power law distribution to account for potential large-scale blowdown events. In both cases, sampling biases turn out to be too small to explain the gains detected by the extended RAINFOR plot network. This result lends further support to the notion that currently observed biomass gains for intact forests across the Amazon are actually occurring over large scales at the current time, presumably as a response to climate change. |
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[Gloor, M.; Phillips, O. L.; Lloyd, J. J.; Lewis, S. L.; Baker, T. R.; Lopez-Gonzalez, G.; Peacock, J.; Feldpausch, T. R.] Univ Leeds, Sch Geog, Leeds LS2 9JT, W Yorkshire, England, Email: eugloor@googlemail.com |
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WILEY-BLACKWELL PUBLISHING, INC |
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1354-1013 |
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ISI:000269577800006 |
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EcoFoG @ eric.marcon @ |
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196 |
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Dézerald, O.; Srivastava, D.S.; Céréghino, R.; Carrias, J.-F.; Corbara, B.; Farjalla, V.F.; Leroy, C.; Marino, N.A.C.; Piccoli, G.C.O.; Richardson, B.A.; Richardson, M.J.; Romero, G.Q.; González, A.L. |
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Title |
Functional traits and environmental conditions predict community isotopic niches and energy pathways across spatial scales |
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Journal Article |
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2018 |
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Functional Ecology |
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32 |
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10 |
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2423-2434 |
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energy pathways; environmental heterogeneity; food webs; functional biogeography; functional diversity; isotopic niche; metacommunity; trophic structure |
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Abstract |
Despite ongoing research in food web ecology and functional biogeography, the links between food web structure, functional traits and environmental conditions across spatial scales remain poorly understood. Trophic niches, defined as the amount of energy and elemental space occupied by species and food webs, may help bridge this divide. Here, we ask how the functional traits of species, the environmental conditions of habitats and the spatial scale of analysis jointly determine the characteristics of trophic niches. We used isotopic niches as a proxy of trophic niches, and conducted analyses at spatial scales ranging from local food webs and metacommunities to geographically distant sites. We sampled aquatic macroinvertebrates from 104 tank bromeliads distributed across five sites from Central to South America and compiled the macroinvertebrates’ functional traits and stable isotope values (δ15N and δ13C). We assessed how isotopic niches within each bromeliad were influenced by the functional trait composition of their associated invertebrates and environmental conditions (i.e., habitat size, canopy cover [CC] and detrital concentration [DC]). We then evaluated whether the diet of dominant predators and, consequently, energy pathways within food webs reflected functional and environmental changes among bromeliads across sites. At last, we determined the extent to which the isotopic niches of macroinvertebrates within each bromeliad contributed to the metacommunity isotopic niches within each site and compared these metacommunity-level niches over biogeographic scales. At the bromeliad level, isotopic niches increased with the functional richness of species in the food web and the DC in the bromeliad. The diet of top predators tracked shifts in prey biomass along gradients of CC and DC. Bromeliads that grew under heterogeneous CC displayed less trophic redundancy and therefore combined to form larger metacommunity isotopic niches. At last, the size of metacommunity niches depended on within-site heterogeneity in CC. Our results suggest that the trophic niches occupied by food webs can predictably scale from local food webs to metacommunities to biogeographic regions. This scaling process is determined by both the functional traits of species and heterogeneity in environmental conditions. A plain language summary is available for this article. © 2018 The Authors. Functional Ecology © 2018 British Ecological Society |
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Luquillo LTER, Institute for Tropical Ecosystem Studies, College of Natural Sciences, University of Puerto Rico at Rio Piedras, San Juan, Puerto Rico |
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Export Date: 22 October 2018 |
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EcoFoG @ webmaster @ |
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828 |
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