Abstract: The influence exerted by tree communities, topography, and soil chemistry on the assembly of macrofungal communities remains poorly understood, especially in highly diverse tropical forests. Here, we used a large dataset that combines inventories of macrofungal Basidiomycetes fruiting bodies, tree species composition, and measurements for 16 soil physicochemical parameters, collected in 34 plots located in four sites of lowland rain forests in French Guiana. Plots were established on three different topographical conditions: hilltop, slope, and seasonally flooded soils. We found hyperdiverse Basidiomycetes communities, mainly comprising members of Agaricales and Polyporales. Phosphorus, clay contents, and base saturation in soils strongly varied across plots and shaped the richness and composition of tree communities. The latter composition explained 23% of the variation in the composition of macrofungal communities, probably through high heterogeneity of the litter chemistry and selective effects of biotic interactions. The high local heterogeneity of habitats influenced the distribution of both macrofungi and trees, as a result of diversed local soil hydromorphic conditions associated with contrasting soil chemistry. This first regional study across habitats of French Guiana forests revealed new niches for macrofungi, such as ectomycorrhizal ones, and illustrates how macrofungi inventories are still paramount to can be to understand the processes at work in the tropics. Abstract in Spanish is available with online material. © 2020 The Association for Tropical Biology and Conservation

Abstract: Background: The Amazonian rainforest is predicted to suffer from ongoing environmental changes. Despite the need to evaluate the impact of such changes on tree genetic diversity, we almost entirely lack genomic resources. Results: In this study, we analysed the transcriptome of four tropical tree species (Carapa guianensis, Eperua falcata, Symphonia globulifera and Virola michelii) with contrasting ecological features, belonging to four widespread botanical families (respectively Meliaceae, Fabaceae, Clusiaceae and Myristicaceae). We sequenced cDNA libraries from three organs (leaves, stems, and roots) using 454 pyrosequencing. We have developed an R and bioperl-based bioinformatic procedure for de novo assembly, gene functional annotation and marker discovery. Mismatch identification takes into account single-base quality values as well as the likelihood of false variants as a function of contig depth and number of sequenced chromosomes. Between 17103 (for Symphonia globulifera) and 23390 (for Eperua falcata) contigs were assembled. Organs varied in the numbers of unigenes they apparently express, with higher number in roots. Patterns of gene expression were similar across species, with metabolism of aromatic compounds standing out as an overrepresented gene function. Transcripts corresponding to several gene functions were found to be over- or underrepresented in each organ. We identified between 4434 (for Symphonia globulifera) and 9076 (for Virola surinamensis) well-supported mismatches. The resulting overall mismatch density was comprised between 0.89 (S. globulifera) and 1.05 (V. surinamensis) mismatches/100 bp in variation-containing contigs.Conclusion: The relative representation of gene functions in the four transcriptomes suggests that secondary metabolism may be particularly important in tropical trees. The differential representation of transcripts among tissues suggests differential gene expression, which opens the way to functional studies in these non-model, ecologically important species. We found substantial amounts of mismatches in the four species. These newly identified putative variants are a first step towards acquiring much needed genomic resources for tropical tree species. © 2014 Brousseau et al.; licensee BioMed Central Ltd.

Abstract: This article reviews an experimental system set up in French Guiana to test different selective thinning methods that started ten to fifteen years after logging in order to reconstitute commercially viable stands within the shortest time. The thinning methods tested involve a combination of selective intervention within a radius of 10 metres around crop trees and systematic intervention applied uniformly to the entire forest parcel. The resulting thinning intensity produces an 8% to 45% reduction in basal area. While the growth of the residual stand is strongly boosted in all species and for all diameters, there is little change in basal area because of high mortality and lower recruitment of commercial species. Standing commercial capital, however, is strongly affected by the thinning operations as defined. In effect, these thinning methods that benefit crop stems do not meet the objective of shorter rotations in Guiana's tropical logging forests. On the other hand, the measurements made in under-treatment stands agree with those obtained at the Paracou experimental station and confirm the need to adopt long cutting cycles of more than fifty years to ensure that the extraction of valuable species is sustainable in the current logging context in French Guiana.

Abstract: To recommend applications in the field of a naturally insecticide plant substance as an alternative to chemical control against termite attacks, several important prerequisites need to be satisfied to ensure its effectiveness. The toxicity, lethal dose, mode of action, persistence of insecticide effect and chemical composition of total aqueous, alcohol and hexane extracts of the leaves and seeds of the neem tree, Azadirachta indica, were tested with the Macrotermes bellicosus termite. The extracts were found to be highly toxic to termites on contact, killing the entire population tested. The insecticide effect of the extracts persisted from 2.4 to 4.2 days. The aqueous and hexane extracts were the most toxic (LD50 0.422±0.018 to 4,466±0,162 mg/l). Contact and inhalation were both essential to their effectiveness. The aqueous extract of seeds, which is the most active, is also capable of being transferred through the colony during social tasks. However, it seems to have an anti-appetent effect on termites and does not act by ingestion. It contains phenol compounds (tannins and flavonoids) and saponins. The hexane extract of seeds is oily and contains 11 fatty acids as well as terpenoids, flavonoids and saponins.

Abstract: This article presents the effects of logging on the dynamics of above-ground biomass from the results of the post-logging study within two forests: Cikel in Eastern Pará, Brazil and Paracou in French Guiana. The main objective is to compare the impact of commercial logging on the regeneration of the aboveground biomass in these forests whose characteristics differ in terms of structure and growth. In both sites, the intensity of exploitation is a key factor in determining the loss of biomass and the time required for its regeneration. In Paracou, the regeneration of biomass lost during conventional logging of 10 trees per hectare takes 45 years and more than 100 years when operating with higher intensity (21 trees/ha ). In Cikel the forest biomass regenerates after 49 years harvesting 6 trees/ha and that takes 87 years after removal of 8 trees/ha. This regeneration needs similar time on both sites but with lower logging intensity at Cikel, in which felled trees are larger with a greater biomass than those of Paracou. This post-logging study has established a direct correlation of the dynamics of the biomass with the initial structure of the forest, as well as with the parameters of forest dynamics: mortality, growth and recruitment. The accumulation of biomass by the tree growth of the two remaining stands is a key parameter for the net carbon storage, while the contribution of recruitment in Paracou becomes significant only after 10 years after felling. Therefore in view to improve the growth of residual trees, it is compulsory to apply adequate silvicultural treatments such as selective thinning or removal of vines. While the two forests are geographically close enough, their regenerative abilities differ and because of the significant difference in size of the trees, the forest could tolerate more intensive harvesting in French Guiana.