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Hein, P. R. G., Chaix, G., Clair, B., Brancheriau, L., & Gril, J. (2016). Spatial variation of wood density, stiffness and microfibril angle along Eucalyptus trunks grown under contrasting growth conditions. Trees – Structure and Function, 30(3), 871–882.
Abstract: Sloped terrains tend to produce trees with higher radial variation in wood density while at high wind speeds, the wood tends to present higher stiffness and lower MFA in Eucalyptus.
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Stahl, C., Freycon, V., Fontaine, S., Dezecache, C., Ponchant, L., Picon-Cochard, C., et al. (2016). Soil carbon stocks after conversion of Amazonian tropical forest to grazed pasture: importance of deep soil layers. Regional Environmental Change, 16(7), 2059–2069.
Abstract: Recent studies suggest that carbon (C) is stored in the topsoil of pastures established after deforestation. However, little is known about the long-term capacity of tropical pastures to sequester C in different soil layers after deforestation. Deep soil layers are generally not taken into consideration or are underestimated when C storage is calculated. Here we show that in French Guiana, the C stored in the deep soil layers contributes significantly to C stocks down to a depth of 100 cm and that C is sequestered in recalcitrant soil organic matter in the soil below a depth of 20 cm. The contribution of the 50–100 cm soil layer increased from 22 to 31 % with the age of the pasture. We show that long-term C sequestration in C4 tropical pastures is linked to the development of C3 species (legumes and shrubs), which increase both inputs of N into the ecosystem and the C:N ratio of soil organic matter. The deep soil under old pastures contained more C3 carbon than the native forest. If C sequestration in the deep soil is taken into account, our results suggest that the soil C stock in pastures in Amazonia would be higher with sustainable pasture management, in particular by promoting the development of legumes already in place and by introducing new species.
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Morel-Journel, T., Piponiot, C., Vercken, E., & Mailleret, L. (2016). Evidence for an optimal level of connectivity for establishment and colonization. Biol Lett, 12(11), 20160704.
Abstract: Dispersal is usually associated with the spread of invasive species, but it also has two opposing effects, one decreasing and the other increasing the probability of establishment. Indeed, dispersal both slows population growth at the site of introduction and increases the likelihood of surrounding habitat being colonized. The connectivity of the introduction site is likely to affect dispersal, and, thus, establishment, according to the dispersal behaviour of individuals. Using individual-based models and microcosm experiments on minute wasps, we demonstrated the existence of a hump-shaped relationship between connectivity and establishment in situations in which individual dispersal resembled a diffusion process. These results suggest that there is an optimal level of connectivity for the establishment of introduced populations locally at the site of introduction, and regionally over the whole landscape.
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Goulamoussene, Y., Bedeau, C., Descroix, L., Deblauwe, V., Linguet, L., & Herault, B. (2016). Weak Environmental Controls of Tropical Forest Canopy Height in the Guiana Shield Remote Sensing. Remote Sens, 8(9), 747.
Abstract: Canopy height is a key variable in tropical forest functioning and for regional carbon inventories. We investigate the spatial structure of the canopy height of a tropical forest, its relationship with environmental physical covariates, and the implication for tropical forest height variation mapping. Making use of high-resolution maps of LiDAR-derived Digital Canopy Model (DCM) and environmental covariates from a Digital Elevation Model (DEM) acquired over 30,000 ha of tropical forest in French Guiana, we first show that forest canopy height is spatially correlated up to 2500 m. Forest canopy height is significantly associated with environmental variables, but the degree of correlation varies strongly with pixel resolution. On the whole, bottomland forests generally have lower canopy heights than hillslope or hilltop forests. However, this global picture is very noisy at local scale likely because of the endogenous gap-phase forest dynamic processes. Forest canopy height has been predictively mapped across a pixel resolution going from 6 m to 384 m mimicking a low resolution case of 3 points·km − 2 . Results of canopy height mapping indicated that the error for spatial model with environment effects decrease from 8.7 m to 0.91 m, depending of the pixel resolution. Results suggest that, outside the calibration plots, the contribution of environment in shaping the global canopy height distribution is quite limited. This prevents accurate canopy height mapping based only on environmental information, and suggests that precise canopy height maps, for local management purposes, can only be obtained with direct LiDAR monitoring.
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Sullivan, M. J. P., Talbot, J., Lewis, S. L., Phillips, O. L., Qie, L., Begne, S. K., et al. (2017). Diversity and carbon storage across the tropical forest biome. Sci. Rep., 7, 39102.
Abstract: Tropical forests are global centres of biodiversity and carbon storage. Many tropical countries aspire to protect forest to fulfil biodiversity and climate mitigation policy targets, but the conservation strategies needed to achieve these two functions depend critically on the tropical forest tree diversity-carbon storage relationship. Assessing this relationship is challenging due to the scarcity of inventories where carbon stocks in aboveground biomass and species identifications have been simultaneously and robustly quantified. Here, we compile a unique pan-Tropical dataset of 360 plots located in structurally intact old-growth closed-canopy forest, surveyed using standardised methods, allowing a multi-scale evaluation of diversity-carbon relationships in tropical forests. Diversity-carbon relationships among all plots at 1 ha scale across the tropics are absent, and within continents are either weak (Asia) or absent (Amazonia, Africa). A weak positive relationship is detectable within 1 ha plots, indicating that diversity effects in tropical forests may be scale dependent. The absence of clear diversity-carbon relationships at scales relevant to conservation planning means that carbon-centred conservation strategies will inevitably miss many high diversity ecosystems. As tropical forests can have any combination of tree diversity and carbon stocks both require explicit consideration when optimising policies to manage tropical carbon and biodiversity. © The Author(s) 2017.
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Goulamoussene, Y., Bedeau, C., Descroix, L., Linguet, L., & Herault, B. (2017). Environmental control of natural gap size distribution in tropical forests. Biogeosciences, 14(2), 353–364.
Abstract: Natural disturbances are the dominant form of forest regeneration and dynamics in unmanaged tropical forests. Monitoring the size distribution of treefall gaps is important to better understand and predict the carbon budget in response to land use and other global changes. In this study, we model the size frequency distribution of natural canopy gaps with a discrete power law distribution. We use a Bayesian framework to introduce and test, using Monte Carlo Markov chain and Kuo-Mallick algorithms, the effect of local physical environment on gap size distribution. We apply our methodological framework to an original light detecting and ranging dataset in which natural forest gaps were delineated over 30 000 ha of unmanaged forest. We highlight strong links between gap size distribution and environment, primarily hydrological conditions and topography, with large gaps being more frequent on floodplains and in wind-exposed areas. In the future, we plan to apply our methodological framework on a larger scale using satellite data. Additionally, although gap size distribution variation is clearly under environmental control, variation in gap size distribution in time should be tested against climate variability. © Author(s) 2017.
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Duval, R., & Duplais, C. (2017). Fluorescent natural products as probes and tracers in biology. Natural Product Reports, 34(2), 161–193.
Abstract: Covering: 1985 up to the end of 2016 Fluorescence is a remarkable property of many natural products in addition to their medicinal and biological values. Herein, we provide a review on these peculiar secondary metabolites to stimulate prospecting of them as original fluorescent tracers, endowed with unique photophysical properties and with applications in most fields of biology. The compounds are spectrally categorized (i.e. fluorescing from violet to the near infra-red) and further structurally classified within each category. Natural products selected for their high impact in modern fluorescence-based biological studies are highlighted throughout the article. Finally, we discuss aspects of chemical ecology where fluorescent natural products might have key evolutionary roles and thus open new research directions in the field. © 2017 The Royal Society of Chemistry.
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Dezecache, C., Faure, E., Gond, V., Salles, J. - M., Vieilledent, G., & Herault, B. (2017). Gold-rush in a forested El Dorado: deforestation leakages and the need for regional cooperation. Environmental Research Letters, 12(3), 034013.
Abstract: Tropical forests of the Guiana Shield are the most affected by gold-mining in South America, experiencing an exponential increase in deforestation since the early 2000’s. Using yearly deforestation data encompassing Guyana, Suriname, French Guiana and the Brazilian State of Amapá, we demonstrated a strong relationship between deforestation due to gold-mining and gold-prices at the regional scale. In order to assess additional drivers of deforestation due to gold-mining, we focused on the national scale and highlighted the heterogeneity of the response to gold-prices under different political contexts. Deforestation due to gold-mining over the Guiana Shield occurs mainly in Guyana and Suriname. On the contrary, past and current repressive policies in Amapá and French Guiana likely contribute to the decorrelation of deforestation and gold prices. In this work, we finally present a case study focusing on French Guiana and Suriname, two neighbouring countries with very different levels of law enforcement against illegal gold-mining. We developed a modelling framework to estimate potential deforestation leakages from French Guiana to Suriname in the border areas. Based on our assumptions, we estimated a decrease in deforestation due to gold-mining of approx. 4300 hectares in French Guiana and an increase of approx. 12 100 hectares in Suriname in response to the active military repression of illegal gold-mining launched in French Guiana. Gold-mining in the Guiana Shield provides challenging questions regarding REDD+ implementation. These questions are discussed at the end of this study and are important to policy makers who need to provide sustainable alternative employment to local populations in order to ensure the effectiveness of environmental policies.
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Levis, C., Costa, F. R. C., Bongers, F., Peña-Claros, M., Clement, C. R., Junqueira, A. B., et al. (2017). Persistent effects of pre-Columbian plant domestication on Amazonian forest composition. Science, 355(6328), 925–931.
Abstract: The marks of prehistoric human societies on tropical forests can still be detected today. Levis et al. performed a basin-wide comparison of plant distributions, archaeological sites, and environmental data. Plants domesticated by pre-Columbian peoples are much more likely to be dominant in Amazonian forests than other species. Furthermore, forests close to archaeological sites often have a higher abundance and richness of domesticated species. Thus, modern-day Amazonian tree communities across the basin remain largely structured by historical human use.Science, this issue p. 925The extent to which pre-Columbian societies altered Amazonian landscapes is hotly debated. We performed a basin-wide analysis of pre-Columbian impacts on Amazonian forests by overlaying known archaeological sites in Amazonia with the distributions and abundances of 85 woody species domesticated by pre-Columbian peoples. Domesticated species are five times more likely than nondomesticated species to be hyperdominant. Across the basin, the relative abundance and richness of domesticated species increase in forests on and around archaeological sites. In southwestern and eastern Amazonia, distance to archaeological sites strongly influences the relative abundance and richness of domesticated species. Our analyses indicate that modern tree communities in Amazonia are structured to an important extent by a long history of plant domestication by Amazonian peoples.
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Grabchak, M., Marcon, E., Lang, G., & Zhang, Z. (2017). The generalized Simpson’s entropy is a measure of biodiversity. Plos One, 12(3), e0173305.
Abstract: Modern measures of diversity satisfy reasonable axioms, are parameterized to produce diversity profiles, can be expressed as an effective number of species to simplify their interpretation, and come with estimators that allow one to apply them to real-world data. We introduce the generalized Simpson’s entropy as a measure of diversity and investigate its properties. We show that it has many useful features and can be used as a measure of biodiversity. Moreover, unlike most commonly used diversity indices, it has unbiased estimators, which allow for sound estimation of the diversity of poorly sampled, rich communities.
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