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Grabchak, M.; Marcon, E.; Lang, G.; Zhang, Z. |
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The generalized Simpson’s entropy is a measure of biodiversity |
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2017 |
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Plos One |
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Plos One |
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12 |
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3 |
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e0173305 |
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Modern measures of diversity satisfy reasonable axioms, are parameterized to produce diversity profiles, can be expressed as an effective number of species to simplify their interpretation, and come with estimators that allow one to apply them to real-world data. We introduce the generalized Simpson’s entropy as a measure of diversity and investigate its properties. We show that it has many useful features and can be used as a measure of biodiversity. Moreover, unlike most commonly used diversity indices, it has unbiased estimators, which allow for sound estimation of the diversity of poorly sampled, rich communities. |
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EcoFoG @ webmaster @ |
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742 |
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Touré, S.; Nirma, C.; Falkowski, M.; Dusfour, I.; Boulogne, I.; Jahn-Oyac, A.; Coke, M.; Azam, D.; Girod, R.; Moriou, C.; Odonne, G.; Stien, D.; Houel, E.; Eparvier, V. |
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Aedes aegypti Larvicidal Sesquiterpene Alkaloids from Maytenus oblongata |
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2017 |
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Journal of Natural Products |
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Journal of Natural Products |
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80 |
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2 |
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384-390 |
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Four new sesquiterpene alkaloids (1-4) with a β-dihydroagrofuran skeleton and a new triterpenoid (5) were isolated from an ethyl acetate extract of Maytenus oblongata stems. Their structures were elucidated using 1D and 2D NMR spectroscopy as well as MS and ECD experiments. The M. oblongata stem EtOAc extract and the pure compounds isolated were tested for larvicidal activity against Aedes aegypti under laboratory conditions, and compounds 2 and 3 were found to be active. © 2017 The American Chemical Society and American Society of Pharmacognosy. |
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Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Sorbonne Universités, UPMC Univ. Paris 06, CNRS, Observatoire Océanologique, Banyuls-sur-Mer, France |
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Export Date: 13 March 2017 |
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EcoFoG @ webmaster @ |
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743 |
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Bastias, C.C.; Fortunel, C.; Valladares, F.; Baraloto, C.; Benavides, R.; Cornwell, W.; Markesteijn, L.; De Oliveira, A.A.; Sansevero, J.B.B.; Vaz, M.C.; Kraft, N.J.B. |
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Intraspecific leaf trait variability along a boreal-to-tropical community diversity gradient |
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2017 |
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PLoS ONE |
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PLoS ONE |
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12 |
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2 |
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e0172495 |
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Disentangling the mechanisms that shape community assembly across diversity gradients is a central matter in ecology. While many studies have explored community assembly through species average trait values, there is a growing understanding that intraspecific trait variation (ITV) can also play a critical role in species coexistence. Classic biodiversity theory hypothesizes that higher diversity at species-rich sites can arise from narrower niches relative to species-poor sites, which would be reflected in reduced ITV as species richness increases. To explore how ITV in woody plant communities changes with species richness, we compiled leaf trait data (leaf size and specific leaf area) in a total of 521 woody plant species from 21 forest communities that differed dramatically in species richness, ranging from boreal to tropical rainforests. At each forest, we assessed ITV as an estimate of species niche breadth and we quantified the degree of trait overlap among co-occurring species as a measure of species functional similarity. We found ITV was relatively invariant across the species richness gradient. In addition, we found that species functional similarity increased with diversity. Contrary to the expectation from classic biodiversity theory, our results rather suggest that neutral processes or equalizing mechanisms can be acting as potential drivers shaping community assembly in hyperdiverse forests. © This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. |
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Universidade Federal Rural do Rio de Janeiro-UFRRJ, Departamento de Ciencias Ambientais-DCA, Instituto de Florestas, Seropédica, Rio de Janeiro, Brazil |
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Export Date: 13 March 2017 |
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EcoFoG @ webmaster @ |
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744 |
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Orivel, J.; Malé, P.-J.; Lauth, J.; Roux, O.; Petitclerc, F.; Dejean, A.; Leroy, C. |
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Trade-offs in an ant–plant–fungus mutualism |
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2017 |
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Proceedings of the Royal Society B: Biological Sciences |
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Proc Biol Sci |
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284 |
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1850 |
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20161679 |
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Species engaged in multiple, simultaneous mutualisms are subject to trade-offs in their mutualistic investment if the traits involved in each interaction are overlapping, which can lead to conflicts and affect the longevity of these associations. We investigate this issue via a tripartite mutualism involving an ant plant, two competing ant species and a fungus the ants cultivate to build galleries under the stems of their host plant to capture insect prey. The use of the galleries represents an innovative prey capture strategy compared with the more typical strategy of foraging on leaves. However, because of a limited worker force in their colonies, the prey capture behaviour of the ants results in a trade-off between plant protection (i.e. the ants patrol the foliage and attack intruders including herbivores) and ambushing prey in the galleries, which has a cascading effect on the fitness of all of the partners. The quantification of partners' traits and effects showed that the two ant species differed in their mutualistic investment. Less investment in the galleries (i.e. in fungal cultivation) translated into more benefits for the plant in terms of less herbivory and higher growth rates and vice versa. However, the greater vegetative growth of the plants did not produce a positive fitness effect for the better mutualistic ant species in terms of colony size and production of sexuals nor was the mutualist compensated by the wider dispersal of its queens. As a consequence, although the better ant mutualist is the one that provides more benefits to its host plant, its lower host–plant exploitation does not give this ant species a competitive advantage. The local coexistence of the ant species is thus fleeting and should eventually lead to the exclusion of the less competitive species. |
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EcoFoG @ webmaster @ |
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745 |
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Aili, S.R.; Touchard, A.; Petitclerc, F.; Dejean, A.; Orivel, J.; Padula, M.P.; Escoubas, P.; Nicholson, G.M. |
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Combined Peptidomic and Proteomic Analysis of Electrically Stimulated and Manually Dissected Venom from the South American Bullet Ant Paraponera clavata |
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Journal Article |
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2017 |
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Journal of Proteome Research |
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J. Proteome Res. |
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16 |
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3 |
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1339-1351 |
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Ants have evolved venoms rich in peptides and proteins used for predation, defense, and communication. However, they remain extremely understudied due to the minimal amount of venom secreted by each ant. The present study investigated the differences in the proteome and peptidome of the venom from the bullet ant, Paraponera clavata. Venom samples were collected from a single colony either by manual venom gland dissection or by electrical stimulation and were compared using proteomic methods. Venom proteins were separated by 2D-PAGE and identified by nanoLC-ESI-QTOF MS/MS. Venom peptides were initially separated using C18 reversed-phase high-performance liquid chromatography, then analyzed by MALDI-TOF MS. The proteomic analysis revealed numerous proteins that could be assigned a biological function (total 94), mainly as toxins, or roles in cell regulation and transport. This investigation found that ca. 73% of the proteins were common to venoms collected by the two methods. The peptidomic analysis revealed a large number of peptides (total 309) but with <20% shared by the two collection methods. There was also a marked difference between venoms obtained by venom gland dissection from different ant colonies. These findings demonstrate the rich composition and variability of P. clavata venom. |
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American Chemical Society |
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1535-3893 |
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EcoFoG @ webmaster @ |
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746 |
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Salas-Lopez, A. |
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Predicting resource use in ant species and entire communities by studying their morphological traits: Influence of habitat and subfamily |
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2017 |
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Ecological Indicators |
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Ecol. Indic. |
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78 |
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183-191 |
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Biodiversity-ecosystem functioning relationships; Ecosystem process; Food niche; Formicidae; Habitat filtering; Indicator; Land-use; Morphological traits; Taxonomic conservatism; Biodiversity; Ecology; Indicators (instruments); Land use; Natural resources management; Ecosystem functioning; Ecosystem process; Formicidae; Morphological traits; Taxonomic conservatism; Ecosystems; Formicidae |
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I investigated whether the morphological traits of Neotropical ants can be used to infer food resource use by individual species and by entire communities, and whether these relationships are related to habitat type and/or by morphological differences between ant subfamilies. I attracted ants using food baits that represented different ecological processes (e.g. predation, granivory, detritivory, nectarivory) in five habitat types along a land-use gradient (from forests to gardens). I assessed ant activity at the baits and characterized 64 species from six subfamilies according to their food use and community-level resource exploitation intensity in the different habitats. Next, I performed a Mantel test to reveal the relationships between 13 morphological measures and resource use at the species level. I then used ant clades (i.e. subfamily) and habitat to rank the ants along three axes of variation in relation to their morphology and food resource use. Finally, I tested whether associations existed between the community-level exploitation intensity for such resources and the distribution of morphological trait values using the “4th-corner” analysis. Morphological traits were closely linked to the species’ ability to exploit different resources. These relationships were affected by subfamily and, to a lesser extent, by habitat type. The characterization of trait sets for entire communities was not useful, however, in predicting the intensity of the exploitation of different types of resources in varying environmental conditions. I conclude that morphological traits are accurate predictors of the ecology of species, but they should be used with caution when trying to understand community-level patterns. © 2017 Elsevier Ltd |
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Export Date: 8 April 2017 |
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EcoFoG @ webmaster @ |
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747 |
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Roy, M.; Vasco-Palacios, A.; Geml, J.; Buyck, B.; Delgat, L.; Giachini, A.; Grebenc, T.; Harrower, E.; Kuhar, F.; Magnago, A.; Rinaldi, A.C.; Schimann, H.; Selosse, M.-A.; Sulzbacher, M.A.; Wartchow, F.; Neves, M.-A. |
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The (re)discovery of ectomycorrhizal symbioses in Neotropical ecosystems sketched in Florianópolis |
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2017 |
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New Phytologist |
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New Phytologist |
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214 |
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3 |
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920-923 |
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barcoding; biodiversity; ectomycorrhizal fungi; ectomycorrhizal roots; ectomycorrhizal symbioses; fruitbodies; Neotropical ecosystems |
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Departamento de Sistemática e Ecologia/CCEN, Laboratório de Morfo-Taxonomia Fúngica, Universidade Federal da Paraíba, João Pessoa, Paraíba, Brazil |
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Cited By :1; Export Date: 23 April 2017 |
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EcoFoG @ webmaster @ |
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749 |
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Grau, O.; Peñuelas, J.; Ferry, B.; Freycon, V.; Blanc, L.; Desprez, M.; Baraloto, C.; Chave, J.; Descroix, L.; Dourdain, A.; Guitet, S.; Janssens, I.A.; Sardans, J.; Herault, B. |
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Nutrient-cycling mechanisms other than the direct absorption from soil may control forest structure and dynamics in poor Amazonian soils |
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2017 |
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Scientific Reports |
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Sci. Rep. |
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7 |
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45017 |
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biomass; forest structure; French Guiana; mortality; nutrient availability; nutrient content; nutrient cycling; nutrient uptake; productivity; soil; storage; tropical rain forest |
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Tropical forests store large amounts of biomass despite they generally grow in nutrient-poor soils, suggesting that the role of soil characteristics in the structure and dynamics of tropical forests is complex. We used data for >34 000 trees from several permanent plots in French Guiana to investigate if soil characteristics could predict the structure (tree diameter, density and aboveground biomass), and dynamics (growth, mortality, aboveground wood productivity) of nutrient-poor tropical forests. Most variables did not covary with site-level changes in soil nutrient content, indicating that nutrient-cycling mechanisms other than the direct absorption from soil (e.g. the nutrient uptake from litter, the resorption, or the storage of nutrients in the biomass), may strongly control forest structure and dynamics. Ecosystem-level adaptations to low soil nutrient availability and long-term low levels of disturbance may help to account for the lower productivity and higher accumulation of biomass in nutrient-poor forests compared to nutrient-richer forests. |
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Export Date: 8 April 2017 |
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EcoFoG @ webmaster @ |
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748 |
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Chang, S.-S.; Quignard, F.; Clair, B. |
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The effect of sectioning and ultrasonication on the mesoporosity of poplar tension wood |
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2017 |
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Wood Science and Technology |
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51 |
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3 |
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507-516 |
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Increasing interest in understanding tension stress generation in tension wood with fibres having a gelatinous layer (G-layer) has focused attention on the specific role of this layer. To distinguish its contribution from those of other wall layers, the G-layer of wood sections was isolated by ultrasonication. The aim of this study was to assess the effect of sectioning and of the ultrasonic treatment on the mesoporosity of tension wood using nitrogen adsorption–desorption analysis. The results showed that the process of isolating the G-layer using ultrasonication strongly affects its mesoporosity. Most damage was found to occur during sectioning rather than as a result of the 15-min ultrasonic treatment. |
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1432-5225 |
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EcoFoG @ webmaster @ Chang2017 |
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782 |
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Stahl, C.; Fontaine, S.; Klumpp, K.; Picon-Cochard, C.; Grise, M.M.; Dezecache, C.; Ponchant, L.; Freycon, V.; Blanc, L.; Bonal, D.; Burban, B.; Soussana, J.-F.; Blanfort, V. |
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Continuous soil carbon storage of old permanent pastures in Amazonia |
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Journal Article |
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2017 |
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Global Change Biology |
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Glob Change Biol |
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23 |
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8 |
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3382-3392 |
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carbon storage; CN coupling; deep soil; mixed-grass pasture; native forest |
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Amazonian forests continuously accumulate carbon (C) in biomass and in soil, representing a carbon sink of 0.42–0.65 GtC yr−1. In recent decades, more than 15% of Amazonian forests have been converted into pastures, resulting in net C emissions (~200 tC ha−1) due to biomass burning and litter mineralization in the first years after deforestation. However, little is known about the capacity of tropical pastures to restore a C sink. Our study shows in French Amazonia that the C storage observed in native forest can be partly restored in old (≥24 year) tropical pastures managed with a low stocking rate (±1 LSU ha−1) and without the use of fire since their establishment. A unique combination of a large chronosequence study and eddy covariance measurements showed that pastures stored between −1.27 ± 0.37 and −5.31 ± 2.08 tC ha−1 yr−1 while the nearby native forest stored −3.31 ± 0.44 tC ha−1 yr−1. This carbon is mainly sequestered in the humus of deep soil layers (20–100 cm), whereas no C storage was observed in the 0- to 20-cm layer. C storage in C4 tropical pasture is associated with the installation and development of C3 species, which increase either the input of N to the ecosystem or the C:N ratio of soil organic matter. Efforts to curb deforestation remain an obvious priority to preserve forest C stocks and biodiversity. However, our results show that if sustainable management is applied in tropical pastures coming from deforestation (avoiding fires and overgrazing, using a grazing rotation plan and a mixture of C3 and C4 species), they can ensure a continuous C storage, thereby adding to the current C sink of Amazonian forests. |
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1365-2486 |
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EcoFoG @ webmaster @ |
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783 |
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