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Author Dubois-Fernandez, P.C.; Le Toan, T.; Daniel, S.; Oriot, H.; Chave, J.; Blanc, L.; Villard, L.; Davidson, M.W.J.; Petit, M. url  openurl
  Title The tropiSAR airborne campaign in French Guiana: Objectives, description, and observed temporal behavior of the backscatter signal Type Journal Article
  Year 2012 Publication IEEE Transactions on Geoscience and Remote Sensing Abbreviated Journal IEEE Trans Geosci Remote Sens  
  Volume 50 Issue 8 Pages 3228-3241  
  Keywords Forestry; interferometry; polarimetric synthetic aperture radar  
  Abstract The TropiSAR campaign has been conducted in August 2009 in French Guiana with the ONERA airborne radar system SETHI. The main objective of this campaign was to collect data to support the Phase A of the 7th Earth Explorer candidate mission, BIOMASS. Several specific questions needed to be addressed to consolidate the mission concept following the Phase 0 studies, and the data collection strategy was constructed accordingly. More specifically, a tropical forest data set was required in order to provide test data for the evaluation of the foreseen inversion algorithms and data products. The paper provides a description of the resulting data set which is now available through the European Space Agency website under the airborne campaign link. First results from the TropiSAR database analysis are presented with two in-depth analyses about both the temporal radiometric variation and temporal coherence at P-band. The temporal variations of the backscatter values are less than 0.5 dB throughout the campaign, and the coherence values are observed to stay high even after 22 days. These results are essential for the BIOMASS mission. The observed temporal stability of the backscatter is a good indicator of the expected robustness of the biomass estimation in tropical forests, from cross-polarized backscatter values as regarding environmental changes such as soil moisture. The high temporal coherence observed after a 22-day period is a prerequisite for SAR Polarimetric Interferometry and Tomographic applications in a single satellite configuration. The conclusion then summarizes the paper and identifies the next steps in the analysis. © 2012 IEEE.  
  Address Institut de Recherche Pour le Développement, 31062 Toulouse, France  
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  ISSN 01962892 (Issn) ISBN Medium  
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  Notes Export Date: 9 August 2012; Source: Scopus; Art. No.: 6146421; Coden: Igrsd; doi: 10.1109/TGRS.2011.2180728; Language of Original Document: English; Correspondence Address: Dubois-Fernandez, P.C.; Office National d'Études et de Recherches Aérospatiales, Department of Electromagnetism and Radarh, 91761 Palaiseau, France; email: pdubois@onera.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 419  
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Author Thevenin, J.-M.; Rossi, V.; Ducamp, M.; Doare, F.; Condina, V.; Lachenaud, P. pdf  url
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  Title Numerous clones resistant to Phytophthora palmivora in the “Guiana” genetic group of Theobroma cacao L Type Journal Article
  Year 2012 Publication PLoS ONE Abbreviated Journal PLoS ONE  
  Volume 7 Issue 7 Pages e40915  
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  Abstract Cocoa black pod rot, a disease caused by Stramenopiles of the genus Phytophthora, and particularly by the pan-tropical species P. palmivora, causes serious production losses worldwide. In order to reduce the impact of these pests and diseases, preference is given to genetic control using resistant varieties and, to that end, breeders seek sources of resistance in wild cocoa trees. For instance, surveys of spontaneous cocoa trees in French Guiana between 1985 and 1995 led to the collection of abundant plant material forming a particular genetic group (the “Guiana” group). Following numerous one-off studies demonstrating the merits of this group as a source of resistance to Phytophthora, this article presents the results of a comprehensive study assessing the resistance of 186 “Guiana” clones in relation to the Guianan strain (GY 27) of P. palmivora. This study, undertaken in French Guiana, using an efficient methodology (ten series of tests and a statistical test adapted to the ordinal nature of the data) confirmed that the “Guiana” genetic group does indeed constitute an important source of resistance to P. palmivora, though with some variations depending on the demes of origin. Numerous clones (59) proved to be as resistant as the SCAVINA 6 resistance control, whilst nine were statistically more resistant. The “Resistant” and “Moderately Resistant” Guianan clones totalled 108 (58% of the total tested). Some of the clones more resistant than SCAVINA 6 could be incorporated into numerous cocoa breeding programmes, particularly those that also display other notable qualities. The same applies for numerous other clones equivalent to SCAVINA 6, especially the “elite”' clones GU 134-B, GU 139-A and GU 285-A. © 2012 Thevenin et al.  
  Address CIRAD, UMR BGPI, Montpellier, France  
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  Notes Export Date: 16 August 2012; Source: Scopus; Art. No.: e40915; doi: 10.1371/journal.pone.0040915; Language of Original Document: English; Correspondence Address: Thevenin, J.-M.; CIRAD, UPR Bioagresseurs: Analyse et Maîtrise du Risque, Kourou, Guyane, France; email: jean-marc.thevenin@cirad.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 423  
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Author Zalamea, P.-C.; Heuret, P.; Sarmiento, C.; Rodríguez, M.; Berthouly, A.; Guitet, S.; Nicolini, E.; Delnatte, C.; Barthélémy, D.; Stevenson, P.R. pdf  url
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  Title The genus Cecropia: A biological clock to estimate the age of recently disturbed areas in the neotropics Type Journal Article
  Year 2012 Publication PLoS ONE Abbreviated Journal PLoS ONE  
  Volume 7 Issue 8 Pages e42643  
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  Abstract Forest successional processes following disturbance take decades to play out, even in tropical forests. Nonetheless, records of vegetation change in this ecosystem are scarce, increasing the importance of the chronosequence approach to study forest recovery. However, this approach requires accurate dating of secondary forests, which until now was a difficult and/or expensive task. Cecropia is a widespread and abundant pioneer tree genus of the Neotropics. Here we propose and validate a rapid and straightforward method to estimate the age of secondary forest patches based on morphological observations of Cecropia trees. We found that Cecropia-inferred ages were highly correlated with known ages of the forest. We also demonstrate that Cecropia can be used to accurately date disturbances and propose twenty-one species distributed all over the geographical range of the genus as potential secondary forest chronometer species. Our method is limited in applicability by the maximal longevity of Cecropia individuals. Although the oldest chronosequence used in this study was 20 years old, we argue that at least for the first four decades after disturbance, the method described in this study provides very accurate estimations of secondary forest ages. The age of pioneer trees provides not only information needed to calculate the recovery of carbon stocks that would help to improve forest management, but also provides information needed to characterize the initial floristic composition and the rates of species remigration into secondary forest. Our contribution shows how successional studies can be reliably and inexpensively extended without the need to obtain forest ages based on expensive or potentially inaccurate data across the Neotropics. © 2012 Zalamea et al.  
  Address Smithsonian Tropical Research Institute, Ancón, Panama  
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  Notes Export Date: 29 August 2012; Source: Scopus; Art. No.: e42643; doi: 10.1371/journal.pone.0042643; Language of Original Document: English; Correspondence Address: Zalamea, P.-C.; Smithsonian Tropical Research Institute, Ancón, Panama; email: camilozalamea@gmail.com Approved no  
  Call Number EcoFoG @ webmaster @ Serial 424  
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Author Courtois, E.A.; Baraloto, C.; Timothy Paine, C.E.; Petronelli, P.; Blandinieres, P.-A.; Stien, D.; Houel, E.; Bessiere, J.-M.; Chave, J. doi  openurl
  Title Differences in volatile terpene composition between the bark and leaves of tropical tree species Type Journal Article
  Year 2012 Publication Phytochemistry Abbreviated Journal Phytochemistry  
  Volume 82 Issue Pages 81-88  
  Keywords French Guiana; Herbivory; Optimal defense theory; Secondary metabolites; Wood  
  Abstract Volatile terpenes are among the most diverse class of defensive compounds in plants, and they are implicated in both direct and indirect defense against herbivores. In terpenes, both the quantity and the diversity of compounds appear to increase the efficiency of defense as a diverse blend of compounds provides a more efficient protection against a broader range of herbivores and limits the chances that an enemy evolves resistance. Theory predicts that plant defensive compounds should be allocated differentially among tissues according to the value of the tissue, its cost of construction and the herbivore pressure on it. We collected volatile terpenes from bark and leaves of 178 individual tree belonging to 55 angiosperm species in French Guiana and compare the kind, amount, and diversity of compounds in these tissues. We hypothesized that in woody plants, the outermost part of the trunk should hold a more diverse blend of volatile terpenes. Additionally, as herbivore communities associated with the leaves is different to the one associated with the bark, we also hypothesized that terpene blends should be distinct in the bark vs. the leaves of a given species. We found that the mixture of volatile terpenes released by bark is different and more diverse than that released by leaves, both in monoterpenes and sesquiterpenes. This supports our hypothesis and further suggests that the emission of terpenes by the bark should be more important for trunk defense than previously thought.  
  Address Station d'Écologie Expérimentale du CNRS Moulis, USR 2936, 2 route du CNRS, 09200 Moulis, France  
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  ISSN 00319422 (Issn) ISBN Medium  
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  Notes Export Date: 4 September 2012; Source: Scopus; Coden: Pytca; doi: 10.1016/j.phytochem.2012.07.003; Language of Original Document: English; Correspondence Address: Courtois, E.A.; Station d'Écologie Expérimentale du CNRS Moulis, USR 2936, 2 route du CNRS, 09200 Moulis, France; email: courtoiselodie@gmail.com Approved no  
  Call Number EcoFoG @ webmaster @ Serial 425  
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Author Ferry, B.; Bontemps, J.-D.; Blanc, L.; Baraloto, C. url  openurl
  Title Is climate a stronger driver of tree growth than disturbance? A comment on Toledo et al. (2011) Type Journal Article
  Year 2012 Publication Journal of Ecology Abbreviated Journal J. Ecol.  
  Volume 100 Issue 5 Pages 1065-1068  
  Keywords Basal area change; Bolivia; Climate; Disturbance; Logging; Plant-climate interactions; Tree growth; Tropical forest  
  Abstract 1.A recent article published by Toledo (2011b) investigates the effects of spatial variations in climate and soil, and of logging disturbance, on tree and forest growth in Bolivia. It concludes that climate is the strongest driver of tree and forest growth and that climate change may therefore have large consequences for forest productivity and carbon sequestration. However, serious methodological and conceptual discrepancies have been found that challenge these conclusions. 2.Because of an errant coding of 'time after logging' in the regression analysis, and because floristic changes induced by logging could not be incorporated into the analysis, the effect of logging on the average diameter growth is likely to have been strongly underestimated. 3.Basal area growth was improperly calculated as basal area change, and it displayed surprisingly high values, even among unlogged plots. We hypothesize that either these plots may be actually located in secondary forests recovering from past logging, or measurement biases may have hampered the data set. 4.Regardless of climate-growth relationships established across these plots, any inference concerning the potential effects of climate change on forest growth would require a specific quantitative assessment. 5.Synthesis. It is critical to re-assess the relative weight of climate and logging disturbance as driving factors of tree and forest growth, and to find an explanation for the very high basal area increment reported among the unlogged plots. We provide specific recommendations for further analyses of this and similar data sets. © 2012 British Ecological Society.  
  Address INRA, UMR Ecologie des Forêts de Guyane, 97379 Kourou, French Guiana  
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  Notes Cited By (since 1996): 1; Export Date: 4 September 2012; Source: Scopus; Coden: Jecoa; doi: 10.1111/j.1365-2745.2011.01895.x; Language of Original Document: English; Correspondence Address: Ferry, B.; AgroParisTech, ENGREF-Nancy, UMR 1092, F-54000 Nancy, France; email: bruno.ferry@engref.agroparistech.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 426  
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Author Fromin, N.; Saby, N.P.A.; Lensi, R.; Brunet, D.; Porte, B.; Domenach, A.-M.; Roggy, J.-C. url  doi
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  Title Spatial variability of soil microbial functioning in a tropical rainforest of French Guiana using nested sampling Type Journal Article
  Year 2013 Publication Geoderma Abbreviated Journal  
  Volume 197-198 Issue Pages 98-107  
  Keywords Denitrification; Respiration; Scale dependent process; Soil microbial processes; Soil organic matter; Tree influence potential  
  Abstract Understanding the pattern in spatial distribution of soil microbial processes is critical to understand the environmental factors that regulate them as well as to scale up these processes to ecosystem. Soil samples from a 1. ha tropical rainforest plot (Paracou, French Guiana) were analyzed according a nested sampling approach using different separation distances ranging from 0.4 to 40. m. The variability of substrate induced respiration (SIR) and of denitrification enzyme activity (DEA) was characterized in relation to various soil properties (total C and N contents, NIRS related index of soil organic matter quality, SOMQ, and index of tree influence potential, IP). The variability of SIR and DEA was higher than that of environmental properties. The patterns of accumulated variance as a function of distance varied among the soil properties. The variability of SIR and DEA mainly occurred at small (1. m) scale (and at the 10-40. m-scales for SIR), probably reflecting the quality of litter input that results of the influence of local assemblage of different tree species, though changes in the soil N and C contents. Indeed, total soil C and N contents explained the microbial properties at every scale. Coefficients of codispersion showed that neither SOMQ nor IP did correlate with SIR and DEA, and confirmed that total C and N contents explained microbial properties in a scale dependent and complex manner. Such spatial dependency underlines the importance of soil heterogeneity in this tropical forest with implications for sampling strategies when studying the microbial processes and their response to disturbances. © 2012 Elsevier B.V.  
  Address UMR EcoFoG, BP 709, 97387 Kourou, GUF, France  
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  Notes Export Date: 13 February 2013; Source: Scopus Approved no  
  Call Number EcoFoG @ webmaster @ Serial 466  
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Author Foken, T.; Meixner, F.X.; Falge, E.; Zetzsch, C.; Serafimovich, A.; Bargsten, A.; Behrendt, T.; Biermann, T.; Breuninger, C.; Dix, S.; Gerken, T.; Hunner, M.; Lehmann-Pape, L.; Hens, K.; Jocher, G.; Kesselmeier, J.; Luers, J.; Mayer, J.C.; Moravek, A.; Plake, D.; Riederer, M.; Rutz, F.; Scheibe, M.; Siebicke, L.; Sorgel, M.; Staudt, K.; Trebs, I.; Tsokankunku, A.; Welling, M.; Wolff, V.; Zhu, Z. openurl 
  Title Coupling processes and exchange of energy and reactive and non-reactive trace gases at a forest site – results of the EGER experiment Type Journal Article
  Year 2012 Publication Atmospheric Chemistry And Physics Abbreviated Journal Atmos. Chem. Phys.  
  Volume 12 Issue 4 Pages 1923-1950  
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  Abstract To investigate the energy, matter and reactive and non-reactive trace gas exchange between the atmosphere and a spruce forest in the German mountain region, two intensive measuring periods were conducted at the FLUXNET site DE-Bay (Waldstein-Weidenbrunnen) in September/October 2007 and June/July 2008. They were part of the project “ExchanGE processes in mountainous Regions” (EGER). Beyond a brief description of the experiment, the main focus of the paper concerns the coupling between the trunk space, the canopy and the above-canopy atmosphere. Therefore, relevant coherent structures were analyzed for different in- and above canopy layers, coupling between layers was classified according to already published procedures, and gradients and fluxes of meteorological quantities as well as concentrations of non-reactive and reactive trace compounds have been sorted along the coupling classes. Only in the case of a fully coupled system, it could be shown, that fluxes measured above the canopy are related to gradients between the canopy and the above-canopy atmosphere. Temporal changes of concentration differences between top of canopy and the forest floor, particularly those of reactive trace gases (NO, NO2, O-3, and HONO) could only be interpreted on the basis of the coupling stage. Consequently, only concurrent and vertically resolved measurements of micrometeorological (turbulence) quantities and fluxes (gradients) of trace compounds will lead to a better understanding of the forest-atmosphere interaction.  
  Address [Foken, T.; Serafimovich, A.; Biermann, T.; Dix, S.; Gerken, T.; Hunner, M.; Jocher, G.; Lueers, J.; Riederer, M.; Ruetz, F.; Siebicke, L.; Staudt, K.] Univ Bayreuth, Dept Micrometeorol, D-95440 Bayreuth, Germany, Email: thomas.foken@uni-bayreuth.de  
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  ISSN 1680-7316 ISBN Medium  
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  Notes WOS:000300875900016 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 464  
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Author Laurans, M.; Martin, O.; Nicolini, E.; Vincent, G. url  openurl
  Title Functional traits and their plasticity predict tropical trees regeneration niche even among species with intermediate light requirements Type Journal Article
  Year 2012 Publication Journal of Ecology Abbreviated Journal J. Ecol.  
  Volume 100 Issue 6 Pages 1440-1452  
  Keywords Canopy disturbance; Determinants of plant community diversity and structure; Growth rate; Irradiance; Leaf life span; Leaf mass per area; Niche differentiation; Phenotypic plasticity; Shade tolerance; Tropical moist forest  
  Abstract Niche differentiation is a key issue in the current debate on community assembly mechanisms. In highly diverse moist tropical forests, tree species sensitivity to canopy openness is thought to be a major axis in niche differentiation. In the past, the syndrome of traits driving the demographic trade-off involved in the niche-based theory of coexistence has always been established among species situated at the two extremities of the shade-tolerance gradient, even though most tropical tree species have intermediate light requirements. In addition, trait plasticity has seldom been linked to tropical tree species distribution along environmental gradients. This article examines covariations between leaf traits, whole-plant traits and niche parameters among 14 tree species with intermediate light requirements in French Guiana and across a range of canopy openness. Each functional trait measured under field conditions was characterized by a median value and a degree of plasticity expressed under contrasting light regimes. Niche differentiation was characterized in terms of spatial light gradient. We first examined covariations between functional traits then explored to what degree the median value and plasticity in functional traits could predict light niche characteristics at the sapling stage and the ontogenetic change in light availability estimated by adult stature. Leaf mass per area (LMA) was positively correlated with leaf life span (LLS); species with higher LMA and higher LLS displayed lower diameter growth rates (GRs) and lower responsiveness to canopy gap at both whole-plant and population levels. This proved that the relationships previously established over a broader range of species held true within the narrow range of the light requirements covered. Height GR plasticity accounted for 49% of the variation in light niche optimum. LMA plasticity, unlike LLS plasticity, was significantly correlated with light niche breadth and adult stature. Synthesis. This study demonstrates the relevance of considering the phenotypic plasticity in functional traits in community ecology, particularly for quantifying breadth of species distribution over environmental gradients. Our findings did not support Hubbell's hypothesis of functional equivalence and suggest that even a rather subtle variation in forest canopy disturbance promotes the coexistence of tropical tree species. © 2012 The Authors. Journal of Ecology © 2012 British Ecological Society.  
  Address UMR AMAP, IRD, TA A-51/PS2, Bd de la Lironde, France  
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  Notes Export Date: 7 November 2012; Source: Scopus; Coden: Jecoa; doi: 10.1111/j.1365-2745.2012.02007.x; Language of Original Document: English; Correspondence Address: Laurans, M.; UMR, AMAP, CIRAD TA A-51/PS1, Bd de la Lironde, 34398 Montpellier Cedex 5, France; email: laurans@cirad.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 445  
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Author Dejean, A.; Delabie, J.H.; Corbara, B.; Azémar, F.; Groc, S.; Orivel, J.; Leponce, M. pdf  url
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  Title The ecology and feeding habits of the arboreal trap-jawed ant Daceton armigerum Type Journal Article
  Year 2012 Publication PloS one Abbreviated Journal PLoS ONE  
  Volume 7 Issue 5 Pages e37683  
  Keywords animal; ant; article; ecology; feeding behavior; Hemiptera; physiology; predation; Animals; Ants; Ecology; Feeding Behavior; Hemiptera; Predatory Behavior  
  Abstract Here we show that Daceton armigerum, an arboreal myrmicine ant whose workers are equipped with hypertrophied trap-jaw mandibles, is characterized by a set of unexpected biological traits including colony size, aggressiveness, trophobiosis and hunting behavior. The size of one colony has been evaluated at ca. 952,000 individuals. Intra- and interspecific aggressiveness were tested and an equiprobable null model used to show how D. armigerum colonies react vis-à-vis other arboreal ant species with large colonies; it happens that D. armigerum can share trees with certain of these species. As they hunt by sight, workers occupy their hunting areas only during the daytime, but stay on chemical trails between nests at night so that the center of their home range is occupied 24 hours a day. Workers tend different Hemiptera taxa (i.e., Coccidae, Pseudococcidae, Membracidae and Aethalionidae). Through group-hunting, short-range recruitment and spread-eagling prey, workers can capture a wide range of prey (up to 94.12 times the mean weight of foraging workers).  
  Address Écologie des Forêts de Guyane, Campus Agronomique, Kourou, France.  
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  Notes Export Date: 2 November 2012; Source: Scopus; doi: 10.1371/journal.pone.0037683; PubMed ID: 22737205; Language of Original Document: English; Correspondence Address: Dejean, A.email: alain.dejean@wanadoo.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 443  
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Author Fortunel, C.; Fine, P.V.A.; Baraloto, C. url  openurl
  Title Leaf, stem and root tissue strategies across 758 Neotropical tree species Type Journal Article
  Year 2012 Publication Functional Ecology Abbreviated Journal Funct. Ecol.  
  Volume 26 Issue 5 Pages 1153-1161  
  Keywords French Guiana; Functional trade-offs; Leaf economics; Peru; Plant traits; Tropical forest; Wood economics  
  Abstract 1. Trade-offs among functional traits reveal major plant strategies that can give insight into species distributions and ecosystem processes. However, current identification of plant strategies lacks the integration of root structural traits together with leaf and stem traits. 2. We examined correlations among 14 traits representing leaf, stem and woody root tissues. Traits were measured on 1084 individuals representing 758 Neotropical tree species, across 13 sites representative of the environmental variation encompassed by three widespread habitats (seasonally flooded, clay terra firme and white-sand forests) at opposite ends of Amazonia (French Guiana and Peru). 3. Woody root traits were closely aligned with stem traits, but not with leaf traits. Altogether leaf, stem and woody root traits delineated two orthogonal axes of functional trade-offs: a first axis defined by leaf traits, corresponding to a 'leaf economics spectrum', and a second axis defined by covarying stem and woody root traits, corresponding to a 'wood economics spectrum'. These axes remained consistent when accounting for species evolutionary history with phylogenetically independent contrasts. 4. Despite the strong species turnover across sites, the covariation among root and stem structural traits as well as their orthogonality to leaf traits were strongly consistent across habitats and regions. 5. We conclude that root structural traits mirrored stem traits rather than leaf traits in Neotropical trees. Leaf and wood traits define an integrated whole-plant strategy in lowland South American forests that may contribute to a more complete understanding of plant responses to global changes in both correlative and modelling approaches. We suggest further meta-analyses in expanded environmental and geographic zones to determine the generality of this pattern. © 2012 The Authors. Functional Ecology © 2012 British Ecological Society.  
  Address Department of Biology, University of Florida, Gainesville, FL, 32611, United States  
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  Notes Export Date: 10 October 2012; Source: Scopus; Coden: Fecoe; doi: 10.1111/j.1365-2435.2012.02020.x; Language of Original Document: English; Correspondence Address: Fortunel, C.; INRA, UMR Ecologie des Forêts de Guyane, BP 709, 97387 Kourou Cedex, France; email: claire.fortunel@ecofog.gf Approved no  
  Call Number EcoFoG @ webmaster @ Serial 440  
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