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Author Latouche-Hallé, C.; Ramboer, A.; Bandou, E.; Caron, H.; Kremer, A. url  openurl
  Title Nuclear and chloroplast genetic structure indicate fine-scale spatial dynamics in a neotropical tree population Type Journal Article
  Year 2003 Publication Heredity Abbreviated Journal Heredity  
  Volume 91 Issue 2 Pages 181-190  
  Keywords Dicorynia guianensis; Gene flow; Genetic differentiation; Microsatellites; Spatial analysis; Tropical tree; gene flow; genetic structure; population genetics; spatial analysis; tree; tropical forest; Cell Nucleus; Chloroplasts; Cohort Studies; DNA, Plant; French Guiana; Genetic Markers; Pollen; Population Dynamics; Seeds; Trees; Variation (Genetics); French Guiana; Dicorynia guianensis; Embryophyta  
  Abstract Dicorynia guianensis is a canopy tree, endemic to the tropical rain forest of French Guiana. We compared generational and spatial genetic structure for maternally and biparentally inherited markers in two cohorts (adult and seedling) in order to infer processes shaping the distribution of genetic diversity. The study was conducted on a 40 ha study plot located at Paracou near Kourou, where 172 adults trees and 375 saplings were sampled. Aggregation of trees was therefore suggested at different distances, ranging from 100 to 400 m. There was a strong link between demographic and genetic spatial structures at small distances (less than 100 m) that is likely to be the consequence of restricted seed dispersal. Genetic differentiation was more pronounced between spatial aggregates than between cohorts. Despite the spatial differentiation, the species was able to maintain high levels of diversity for maternal genomes, suggesting rapid turnover of aggregates. Spatial autocorrelation was larger for chloroplast than nuclear markers indicating a strong asymmetry between pollen and seed flow. Fixation indices indicated a lower heterozygote deficiency for the adults, maybe because of gradual elimination of selfed trees. Genetic relatedness at lower distances was higher in adult trees than in saplings, as a result of generation overlapping in the adult cohort. Overall, our results confirm earlier biological knowledge about the dispersion mechanisms of the species, and lead to an enhanced role of spatial processes in the dynamics of genetic diversity of D. guianensis.  
  Address INRA Lab. Genet. Arbres Forestiers, BP45, 33611 Gazinet Cedex, France  
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  ISSN 0018067x (Issn) ISBN Medium  
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  Notes (up) Cited By (since 1996): 34; Export Date: 22 October 2011; Source: Scopus; Coden: Hdtya; doi: 10.1038/sj.hdy.6800296; PubMed ID: 12886285; Language of Original Document: English; Correspondence Address: Caron, H.; INRA Lab. Genet. Arbres Forestiers, BP45, 33611 Gazinet Cedex, France; email: caron@pierroton.inra.fr; Chemicals/CAS: DNA, Plant; Genetic Markers Approved no  
  Call Number EcoFoG @ webmaster @ Serial 358  
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Author Staudt, K.; Serafimovich, A.; Siebicke, L.; Pyles, R.D.; Falge, E. url  openurl
  Title Vertical structure of evapotranspiration at a forest site (a case study) Type Journal Article
  Year 2011 Publication Agricultural and Forest Meteorology Abbreviated Journal Agric. For. Meterol.  
  Volume 151 Issue 6 Pages 709-729  
  Keywords Eddy-covariance; Evapotranspiration; In-canopy profiles; Model; Picea abies L.; Sap flux; coniferous forest; ecosystem modeling; eddy covariance; evapotranspiration; forest canopy; sap flow; Fichtelgebirge; Germany; Picea abies  
  Abstract The components of ecosystem evapotranspiration of a Norway spruce forest (Picea abies L.) as well as the vertical structure of canopy evapotranspiration were analyzed with a combination of measurements and models for a case study of 5 days in September 2007. Eddy-covariance and sap flux measurements were performed at several heights within the canopy at the FLUXNET site Waldstein-Weidenbrunnen (DE-Bay) in the Fichtelgebirge mountains in Germany. Within and above canopy fluxes were simulated with two stand-scale models, the 1D multilayer model ACASA that includes a third-order turbulence closure and the 3D model STANDFLUX. The soil and understory evapotranspiration captured with the eddy-covariance system in the trunk space constituted 10% of ecosystem evapotranspiration measured with the eddy-covariance system above the canopy. A comparison of transpiration measured with the sap flux technique and inferred from below and above canopy eddy-covariance systems revealed higher estimates from eddy-covariance measurements than for sap flux measurements. The relative influences of possible sources of this mismatch, such as the assumption of negligible contribution of evaporation from intercepted water, and differences between the eddy-covariance flux footprint and the area used for scaling sap flux measurements, were discussed. Ecosystem evapotranspiration as well as canopy transpiration simulated with the two models captured the dynamics of the measurements well, but slightly underestimated eddy-covariance values. Profile measurements and models also gave us the chance to assess in-canopy profiles of canopy evapotranspiration and the contributions of in-canopy layers. For daytime and a coupled or partly coupled canopy, mean simulated profiles of both models agreed well with eddy-covariance measurements, with a similar performance of the ACASA and the STANDFLUX model. Both models underestimated profiles for nighttime and decoupled conditions. During daytime, the upper half of the canopy contributed approximately 80% to canopy evapotranspiration, whereas during nighttime the contribution shifted to lower parts of the canopy. © 2010 Elsevier B.V.  
  Address Max Planck Institute for Chemistry, Biogeochemistry Department, Joh.-J.-Becherweg 27, 55128 Mainz, Germany  
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  ISSN 01681923 (Issn) ISBN Medium  
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  Notes (up) Cited By (since 1996): 3; Export Date: 21 October 2011; Source: Scopus; Coden: Afmee; doi: 10.1016/j.agrformet.2010.10.009; Language of Original Document: English; Correspondence Address: Staudt, K.; University of Bayreuth, Department of Micrometeorology, 95440 Bayreuth, Germany; email: katharina.staudt@uni-bayreuth.de Approved no  
  Call Number EcoFoG @ webmaster @ Serial 349  
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Author Sharma, K.; Degen, B.; Von Wuehlisch, G.; Singh, N.B. url  openurl
  Title Allozyme variation in eight natural populations of Pinus roxburghii Sarg. in India Type Journal Article
  Year 2002 Publication Silvae Genetica Abbreviated Journal Silvae Genet.  
  Volume 51 Issue 5-6 Pages 246-253  
  Keywords Allozymes; Differentiation; Genetic distance; Multilocus diversity; Pinus roxburghii; Variation; Enzymes; Forestry; Genes; Allozyme variations; Genetic engineering; Enzymes; Genes; Genetic Engineering; Pinus Roxburghii; Embryophyta; Pinus roxburghii  
  Abstract Seeds collected from eight populations of Chir pine (Pinus roxburghii SARG.) from the natural distribution range of the species in Himachal Himalayas in India were analysed isozymatically at 11 enzyme systems. For the enzyme systems studied, 25 gene loci were identified out of which 18 were polymorphic. The observed mean values for genetic variation were slightly lower than mean values reported for Pinus species (number of alleles: 1.65 compared to 2.36; effective number of alleles: 1.13 compared to 1.26; observed heterozygosity: 0.153 compared to 0.179). A small differentiation among populations and large variation within populations were reflected by small value of GST (0.04): Considering the different genetic parameters three populations seem favourable for gene conservation measures.  
  Address Silviculture Division, Forest Research Institute, Dehra Dun – 248 006, India  
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  ISSN 00375349 (Issn) ISBN Medium  
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  Notes (up) Cited By (since 1996): 4; Export Date: 22 October 2011; Source: Scopus; Coden: Sigea; Language of Original Document: English; Correspondence Address: Sharma, K.; Dr. Y. S. Parmar Univ. Hort./Forest., Reg. Horticultural Research Station, Jachh (Nurpur)-176 201 (HP), India Approved no  
  Call Number EcoFoG @ webmaster @ Serial 360  
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Author Christensen-Dalsgaard, K.K.; Ennos, A.R.; Fournier, M. url  openurl
  Title Changes in hydraulic conductivity, mechanical properties, and density reflecting the fall in strain along the lateral roots of two species of tropical trees Type Journal Article
  Year 2007 Publication Journal of Experimental Botany Abbreviated Journal J. Exp. Bot.  
  Volume 58 Issue 15-16 Pages 4095-4105  
  Keywords Buttress roots; Density; Hydraulic conductivity; Hydraulic-mechanical trade-offs; Modulus of elasticity; Tropical trees; Wood; Elastic moduli; Hydraulic conductivity; Wood; Buttress roots; Hydraulic-mechanical trade-offs; Tropical trees; Forestry; water; article; biomechanics; histology; legume; physiology; plant root; plant stem; tree; wood; Xylopia; Biomechanics; Fabaceae; Plant Roots; Plant Stems; Trees; Water; Wood; Xylopia; Conductivity; Elastic Strength; Forestry; Wood  
  Abstract Roots have been described as having larger vessels and so greater hydraulic efficiency than the stem. Differences in the strength and stiffness of the tissue within the root system itself are thought to be an adaptation to the loading conditions experienced by the roots and to be related to differences in density. It is not known how potential mechanical adaptations may affect the hydraulic properties of the roots. The change in strength, stiffness, conductivity, density, sapwood area, and second moment of area distally along the lateral roots of two tropical tree species in which the strain is known to decrease rapidly was studied and the values were compared with those of the trunk. It was found that as the strain fell distally along the roots, so did the strength and stiffness of the tissue, whereas the conductivity increased exponentially. These changes appeared to be related to differences in density. In contrast to the distal-most roots, the tissue of the proximal roots had a lower conductivity and higher strength than that of the trunk. This suggests that mechanical requirements on the structure rather than the water potential gradient from roots to branches are responsible for the general pattern that roots have larger vessels than the stem. In spite of their increased transectional area, the buttressed proximal roots were subjected to higher levels of stress and had a lower total conductivity than the rest of the root system. © 2007 The Author(s).  
  Address AgroParisTech, LERFOB, Ecole Nationale du Genie Rural, des Eaux et Forêts, 14 Avenue Girardet-CS 4216, 54000 Nancy Cedex, France  
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  ISSN 00220957 (Issn) ISBN Medium  
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  Notes (up) Cited By (since 1996): 6; Export Date: 22 October 2011; Source: Scopus; Coden: Jeboa; doi: 10.1093/jxb/erm268; PubMed ID: 18039738; Language of Original Document: English; Correspondence Address: Christensen-Dalsgaard, K.K.; University of Manchester, Faculty of Life Sciences, Jackson's Mill, Manchester M60 1QD, United Kingdom; email: karen@cd-mail.dk; Chemicals/CAS: water, 7732-18-5; Water, 7732-18-5 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 353  
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Author Dejean, A.; Moreau, C.S.; Uzac, P.; Le Breton, J.; Kenne, M. url  openurl
  Title The predatory behavior of Pheidole megacephala Type Journal Article
  Year 2007 Publication Comptes Rendus Biologies Abbreviated Journal C. R. Biol.  
  Volume 330 Issue 9 Pages 701-709  
  Keywords Invasive ants; Landmarks; Pheidole megacephala; Predatory behavior; Recruitment; pheromone; ant; behavioral ecology; foraging behavior; invasive species; nest predation; pheromone; predator-prey interaction; animal experiment; ant; article; competitor species; controlled study; foraging behavior; host range; Isoptera; nest predation; nonhuman; predation; predator prey interaction; prey selection; species invasion; worker (insect); Animals; Ants; Feeding Behavior; Female; Isoptera; Predatory Behavior; Social Behavior; Formicidae; Hexapoda; Isoptera; Pheidole megacephala  
  Abstract We studied the foraging and predatory behaviors of the invasive African myrmicine ant, Pheidole megacephala (F.) in its native range. Workers can singly capture a wide range of insects, including relatively large prey items. For still larger prey, they recruit at short range those nestmates situated within reach of an alarm pheromone and together spread-eagle the insect. These behaviors are complimented by a long-range recruitment (of nestmates remaining in the nest) based on prey size. P. megacephala scouts also use long-range recruitment when they detect the landmarks of termites and competing ant species, thus permitting them to avoid confronting these termites and ants solitarily.  
  Address Département de biologie des organismes animaux, faculté des sciences, l'université de Douala, BP 24157, Douala, Cameroon  
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  Notes (up) Cited By (since 1996): 8; Export Date: 22 October 2011; Source: Scopus; Coden: Crboc; doi: 10.1016/j.crvi.2007.06.005; PubMed ID: 17720587; Language of Original Document: English; Correspondence Address: Dejean, A.; CNRS-Guyane, UPS 2561, UMR-CNRS 5174, 16, avenue André-Aron, 97300 Cayenne, France; email: alain.dejean@wanadoo.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 354  
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Author Dejean, A.; Delabie, J.H.C.; Cerdan, P.; Gibernau, M.; Corbara, B. url  openurl
  Title Are myrmecophytes always better protected against herbivores than other plants? Type Journal Article
  Year 2006 Publication Biological Journal of the Linnean Society Abbreviated Journal Biol. J. Linn. Soc.  
  Volume 89 Issue 1 Pages 91-98  
  Keywords Ant-plant mutualism; Azteca; Maieta; Myrmecophytes; Plant protection; Tococa; ant; defoliation; field method; mutualism; myrmecophyte; plant-herbivore interaction; Azteca; Azteca bequaerti; Clidemia; Crematogaster laevis; Formicidae; Maieta; Maieta guianensis; Pheidole minutula; Tococa; Tococa guianensis  
  Abstract The present field study compared the degree of defoliation of three Guianian melastome, two myrmecophytes (i.e. plants sheltering ants in hollow structures) and Clidemia sp., a nonmyrmecophytic plant serving as a control. Maieta guianensis Aubl. hosted mostly Pheidole minutula Mayr whatever the area, whereas Tococa guianensis Aubl. hosted mostly Azteca bequaerti Wheeler along streams and Crematogaster laevis Mayr or Azteca sp. 1 in the understory where it never blossomed. Only Tococa, when sheltering A. bequaerti in what can be considered as a truly mutualistic relationship, showed significantly less defoliation than control plants. In the other associations, the difference was not significant, but P. minutula is mutualistic with Maieta because it furnishes some protection (exclusion experiments) plus nutrients (previous studies). When devoid of ants, Tococa showed significantly greater defoliation than control plants; therefore, it was deduced that Tococa probably lacks certain antidefoliator metabolites that control plants possess (both Tococa and control plants are protected by ground-nesting, plant-foraging ants, which is termed 'general myrmecological protection'). Consequently, plant-ants other than A. bequaerti probably also protect Tococa slightly, thus compensating for this deficiency and permitting it to live in the understory until treefall gaps provide the conditions necessary for seed production. © 2006 The Linnean Society of London.  
  Address Laboratoire de Psychologie Sociale de la Cognition (UMR CNRS 6024), Université Blaise Pascal, 34 avenue Carnot, 63037 Clermont-Ferrand Cedex, France  
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  Notes (up) Cited By (since 1996): 9; Export Date: 22 October 2011; Source: Scopus; Coden: Bjlsb; doi: 10.1111/j.1095-8312.2006.00660.x; Language of Original Document: English; Correspondence Address: Dejean, A.; Laboratoire d'Evolution et Diversité Biologique (UMR CNRS 5174), Université Toulouse III, Bâtiment 4R3, 118 route de Narbonne, 31062 Toulouse Cedex, France; email: dejean@cict.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 355  
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Author Porth, I.; Scotti-Saintagne, C.; Barreneche, T.; Kremer, A.; Burg, K. url  openurl
  Title Linkage mapping of osmotic stress induced genes of oak Type Journal Article
  Year 2005 Publication Tree Genetics and Genomes Abbreviated Journal Tree Genet. Genomes  
  Volume 1 Issue 1 Pages 31-40  
  Keywords Est; Linkage map; Oak; Osmotic stress; Quercus ssp.; Fagaceae; Quercus; Quercus petraea; Quercus robur  
  Abstract Water stress affecting long-lived trees is an important challenge in forestry. Due to global climate change, forest trees will be threatened by extreme conditions like flooding or drought. It is necessary to understand differences in stress tolerance within certain species and to investigate putative relations on genomic level. In this study, osmotic stress induced genes of Quercus ssp. were positioned on two genetic linkage maps of oak. An intra-specific cross 3P*A4 of Quercus robur consisting of 88 offspring and an inter-specific cross 11P*QS29 of Q. robur and Q. petraea comprising 72 full-sibs were analyzed for the inheritance of 14 loci represented by 34 individual single nucleotide polymorphisms. Seven genes in the intra-cross, as well as other six genes in the inter-cross could be mapped and one gene could not be localised due to the severe distortion of the segregation. The collection of expressed sequences involved ribosomal proteins, members of the oxylase/oxygenase gene family, betaine aldehyde dehydrogenase, Dc3 promoter-binding factor, a putative member of the nodulin family, glutathione-S-transferase and proteins with unknown functions. In the inter-cross, two linked markers exhibited 89% deficiency of heterozygosity. Thirteen genes were positioned on ten different oak chromosomes and can serve as orthologous markers in comparative mapping studies within Fagaceae. © Springer-Verlag 2005.  
  Address INRA BIOGECO, 69 Route d'Arcachon, 33612 Cestas, France  
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  Notes (up) Cited By (since 1996): 9; Export Date: 22 October 2011; Source: Scopus; doi: 10.1007/s11295-005-0005-1; Language of Original Document: English; Correspondence Address: Burg, K.; Division of Biogenetics and Natural Resources, Austrian Research Center Seibersdorf, 2444 Seibersdorf, Austria; email: kornel.burg@arcs.ac.at Approved no  
  Call Number EcoFoG @ webmaster @ Serial 357  
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Author Fournier, M.; Dlouhá, J.; Jaouen, G.; Almeras, T. url  openurl
  Title Integrative biomechanics for tree ecology: Beyond wood density and strength Type Journal Article
  Year 2013 Publication Journal of Experimental Botany Abbreviated Journal J. Exp. Bot.  
  Volume 64 Issue 15 Pages 4793-4815  
  Keywords Biomechanics; Ecological strategy; Gravitropism; Shape; Size; Trees; Wood  
  Abstract Functional ecology has long considered the support function as important, but its biomechanical complexity is only just being elucidated. We show here that it can be described on the basis of four biomechanical traits, two safety traits against winds and self-buckling, and two motricity traits involved in sustaining an upright position, tropic motion velocity (MV) and posture control (PC). All these traits are integrated at the tree scale, combining tree size and shape together with wood properties. The assumption of trait constancy has been used to derive allometric scaling laws, but it was more recently found that observing their variations among environments and functional groups, or during ontogeny, provides more insights into adaptive syndromes of tree shape and wood properties. However, oversimpli-fed expressions have often been used, possibly concealing key adaptive drivers. An extreme case of oversimplification is the use of wood basic density as a proxy for safety. Actually, as wood density is involved in stiffiness, loads, and construction costs, the impact of its variations on safety is non-trivial. Moreover, other wood features, especially the microfibril angle (MFA), are also involved. Furthermore, wood is not only stiff and strong, but it also acts as a motor for MV and PC. The relevant wood trait for this is maturation strain asymmetry. Maturation strains vary with cell-wall characteristics such as MFA, rather than with wood density. Finally, the need for further studies about the ecological relevance of branching patterns, motricity traits, and growth responses to mechanical loads is discussed. © The Author 2013.  
  Address CNRS, Université de Montpellier 2, Laboratoire de Mécanique et Génie Civil, 34095 Montpellier, France  
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  Notes (up) Cited By (since 1996):1; Export Date: 2 December 2013; Source: Scopus; Coden: Jeboa; doi: 10.1093/jxb/ert279; Language of Original Document: English; Correspondence Address: Fournier, M.; AgroParisTech, UMR 1092 LERFOB, 54000 Nancy, France; email: meriem.fournier@agroparistech.fr; References: Achim, A., Ruel, J.C., Gardiner, B.A., Lafamme, G., Meunier, S., Modelling the vulnerability of balsam fr forests to wind damage (2005) Forest Ecology and Management, 204, pp. 35-50; Almeras, T., Costes, E., Salles, J.C., Identification of biomechanical factors involved in stem shape variability between apricot-tree varieties (2004) Annals of Botany, 93, pp. 1-14; Almeras, T., Derycke, M., Jaouen, G., Beauchene, J., Fournier, M., Functional diversity in gravitropic reaction among tropical seedlings in relation to ecological and developmental traits (2009) Journal of Experimental Botany, 60, pp. 4397-4410; Almeras, T., Fournier, M., Biomechanical design and longterm stability of trees: Morphological and wood traits involved in the balance between weight increase and the gravitropic reaction (2009) Journal of Theoretical Biology, 256, pp. 370-381; Almeras, T., Gril, J., Costes, E., Bending of apricot tree branches under the weight of axillary growth: Test of a mechanical model with experimental data (2002) Trees – Structure and Function, 16, pp. 5-15; Almeras, T., Thibaut, A., Gril, J., Effect of circumferential heterogeneity of wood maturation strain, modulus of elasticity and radial growth on the regulation of stem orientation in trees (2005) Trees – Structure and Function, 19, pp. 457-467; Anten, N.P.R., Schieving, F., The role of wood mass density and mechanical constraints in the economy of tree architecture (2010) American Naturalist, 175, pp. 250-260; Archer, R.R., Wilson, B.F., Mechanics of the compression wood response II. 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Author Rowland, L.; Hill, T.C.; Stahl, C.; Siebicke, L.; Burban, B.; Zaragoza-Castells, J.; Ponton, S.; Bonal, D.; Meir, P.; Williams, M. url  openurl
  Title Evidence for strong seasonality in the carbon storage and carbon use efficiency of an Amazonian forest Type Journal Article
  Year 2014 Publication Global Change Biology Abbreviated Journal Global Change Biol.  
  Volume 20 Issue 3 Pages 979-991  
  Keywords Carbon use efficiency; Dalec; Data assimilation; Ecosystem respiration; French Guiana; Seasonal carbon fluxes; Tropical forest  
  Abstract The relative contribution of gross primary production and ecosystem respiration to seasonal changes in the net carbon flux of tropical forests remains poorly quantified by both modelling and field studies. We use data assimilation to combine nine ecological time series from an eastern Amazonian forest, with mass balance constraints from an ecosystem carbon cycle model. The resulting analysis quantifies, with uncertainty estimates, the seasonal changes in the net carbon flux of a tropical rainforest which experiences a pronounced dry season. We show that the carbon accumulation in this forest was four times greater in the dry season than in the wet season and that this was accompanied by a 5% increase in the carbon use efficiency. This seasonal response was caused by a dry season increase in gross primary productivity, in response to radiation and a similar magnitude decrease in heterotrophic respiration, in response to drying soils. The analysis also predicts increased carbon allocation to leaves and wood in the wet season, and greater allocation to fine roots in the dry season. This study demonstrates implementation of seasonal variations in parameters better enables models to simulate observed patterns in data. In particular, we highlight the necessity to simulate the seasonal patterns of heterotrophic respiration to accurately simulate the net carbon flux seasonal tropical forest. © 2013 The Authors Global Change Biology Published by John Wiley & Sons Ltd.  
  Address Research School of Biology, Division of Plant Sciences, Australian National University, Canberra, ACT, 0200, Australia  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 13541013 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (up) Cited By (since 1996):1; Export Date: 24 February 2014; Source: Scopus; Language of Original Document: English; Correspondence Address: Rowland, L.; School of Geosciences, University of Edinburgh, Edinburgh, EH9 3JN, United Kingdom; email: lucy.rowland@ed.ac.uk; Funding Details: FT110100457, ARC, Australian Research Council; Funding Details: NE/F002149/1, NERC, Natural Environment Research Council; Funding Details: NE/J011002/1, NERC, Natural Environment Research Council Approved no  
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Author Touchard, A.; Dauvois, M.; Arguel, M.-J.; Petitclerc, F.; Leblanc, M.; Dejean, A.; Orivel, J.; Nicholson, G.M.; Escoubas, P. url  openurl
  Title Elucidation of the unexplored biodiversity of ant venom peptidomes via MALDI-TOF mass spectrometry and its application for chemotaxonomy Type Journal Article
  Year 2014 Publication Journal of Proteomics Abbreviated Journal J. Proteomics  
  Volume 105 Issue Pages 217-231  
  Keywords Ant venom; Chemotaxonomy; Maldi-Tof Ms; Peptide; Peptidome; Ponerinae; ant venom; cytochrome c oxidase; ant; article; biodiversity; chemotaxonomy; correlational study; DNA sequence; French Guiana; Hymenoptera; matrix assisted laser desorption ionization time of flight mass spectrometry; mitochondrial gene; nonhuman; Odontomachus biumbonatus; Odontomachus haematodus; Odontomachus hastatus; Odontomachus mayi; Odontomachus scalptus; Pachcondyla apicalis; Pachcondyla arhuaca; Pachcondyla commutata; Pachcondyla constricta; Pachcondyla crassinola; Pachcondyla goeldii; Pachcondyla inversa; Pachcondyla marginata; Pachcondyla procidua; Pachcondyla stigma; Pachcondyla verenae; Pachcondyla villosa; peptidomics; phylogeny; priority journal; Animalia; Formicidae; Hymenoptera; Odontomachus; Pachycondyla; Pachycondyla apicalis; Pachycondyla stigma; Ponerinae  
  Abstract The rise of integrative taxonomy, a multi-criteria approach used in characterizing species, fosters the development of new tools facilitating species delimitation. Mass spectrometric (MS) analysis of venom peptides from venomous animals has previously been demonstrated to be a valid method for identifying species. Here we aimed to develop a rapid chemotaxonomic tool for identifying ants based on venom peptide mass fingerprinting. The study focused on the biodiversity of ponerine ants (Hymenoptera: Formicidae: Ponerinae) in French Guiana. Initial experiments optimized the use of automated matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) to determine variations in the mass profiles of ant venoms using several MALDI matrices and additives. Data were then analyzed via a hierarchical cluster analysis to classify the venoms of 17 ant species. In addition, phylogenetic relationships were assessed and were highly correlated with methods using DNA sequencing of the mitochondrial gene cytochrome c oxidase subunit 1. By combining a molecular genetics approach with this chemotaxonomic approach, we were able to improve the accuracy of the taxonomic findings to reveal cryptic ant species within species complexes. This chemotaxonomic tool can therefore contribute to more rapid species identification and more accurate taxonomies. Biological significance: This is the first extensive study concerning the peptide analysis of the venom of both Pachycondyla and Odontomachus ants. We studied the venoms of 17 ant species from French Guiana that permitted us to fine-tune the venom analysis of ponerine ants via MALDI-TOF mass spectrometry. We explored the peptidomes of crude ant venom and demonstrated that venom peptides can be used in the identification of ant species. In addition, the application of this novel chemotaxonomic method combined with a parallel genetic approach using COI sequencing permitted us to reveal the presence of cryptic ants within both the Pachycondyla apicalis and Pachycondyla stigma species complexes. This adds a new dimension to the search for means of exploiting the enormous biodiversity of venomous ants as a source for novel therapeutic drugs or biopesticides. This article is part of a Special Issue entitled: Proteomics of non-model organisms. © 2014 Elsevier B.V.  
  Address Neurotoxin Research Group, School of Medical and Molecular Biosciences, University of Technology, Sydney, NSW, Australia  
  Corporate Author Thesis  
  Publisher Elsevier Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 18767737 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (up) Cited By (since 1996):1; Export Date: 30 July 2014; Correspondence Address: Touchard, A.; UMR-EcoFoG, Campus Agronomique, BP 316, 97379 Kourou Cedex, France; email: axel.touchard@ecofog.gf; Chemicals/CAS: cytochrome c oxidase, 72841-18-0, 9001-16-5 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 555  
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