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Fauset, S.; Johnson, M.O.; Gloor, M.; Baker, T.R.; Monteagudo M., A.; Brienen, R.J.W.; Feldpausch, T.R.; Lopez-Gonzalez, G.; Malhi, Y.; Ter Steege, H.; Pitman, N.C.A.; Baraloto, C.; Engel, J.; Petronelli, P.; Andrade, A.; Camargo, J.L.C.; Laurance, S.G.W.; Laurance, W.F.; Chave, J.; Allie, E.; Vargas, P.N.; Terborgh, J.W.; Ruokolainen, K.; Silveira, M.; Aymard C., G.A.; Arroyo, L.; Bonal, D.; Ramirez-Angulo, H.; Araujo-Murakami, A.; Neill, D.; Herault, B.; Dourdain, A.; Torres-Lezama, A.; Marimon, B.S.; Salomão, R.P.; Comiskey, J.A.; Réjou-Méchain, M.; Toledo, M.; Licona, J.C.; Alarcón, A.; Prieto, A.; Rudas, A.; Van Der Meer, P.J.; Killeen, T.J.; Marimon Junior, B.-H.; Poorter, L.; Boot, R.G.A.; Stergios, B.; Torre, E.V.; Costa, F.R.C.; Levis, C.; Schietti, J.; Souza, P.; Groot, N.; Arets, E.; Moscoso, V.C.; Castro, W.; Coronado, E.N.H.; Peña-Claros, M.; Stahl, C.; Barroso, J.; Talbot, J.; Vieira, I.C.G.; Van Der Heijden, G.; Thomas, R.; Vos, V.A.; Almeida, E.C.; Davila, E.Á.; Aragão, L.E.O.C.; Erwin, T.L.; Morandi, P.S.; De Oliveira, E.A.; Valadão, M.B.X.; Zagt, R.J.; Van Der Hout, P.; Loayza, P.A.; Pipoly, J.J.; Wang, O.; Alexiades, M.; Cerón, C.E.; Huamantupa-Chuquimaco, I.; Di Fiore, A.; Peacock, J.; Camacho, N.C.P.; Umetsu, R.K.; De Camargo, P.B.; Burnham, R.J.; Herrera, R.; Quesada, C.A.; Stropp, J.; Vieira, S.A.; Steininger, M.; Rodríguez, C.R.; Restrepo, Z.; Muelbert, A.E.; Lewis, S.L.; Pickavance, G.C.; Phillips, O.L. |
| Title |
Hyperdominance in Amazonian forest carbon cycling |
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Journal Article |
| Year |
2015 |
Publication |
Nature Communications |
Abbreviated Journal |
Nature Communications |
| Volume |
6 |
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6857 |
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While Amazonian forests are extraordinarily diverse, the abundance of trees is skewed strongly towards relatively few â € hyperdominantâ €™ species. In addition to their diversity, Amazonian trees are a key component of the global carbon cycle, assimilating and storing more carbon than any other ecosystem on Earth. Here we ask, using a unique data set of 530 forest plots, if the functions of storing and producing woody carbon are concentrated in a small number of tree species, whether the most abundant species also dominate carbon cycling, and whether dominant species are characterized by specific functional traits. We find that dominance of forest function is even more concentrated in a few species than is dominance of tree abundance, with only â ‰1% of Amazon tree species responsible for 50% of carbon storage and productivity. Although those species that contribute most to biomass and productivity are often abundant, species maximum size is also influential, while the identity and ranking of dominant species varies by function and by region. © 2015 Macmillan Publishers Limited. All rights reserved. |
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Instituto de Biologia, Universidade Estadual de CampinasCampinas, Brazil |
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Export Date: 18 May 2015 |
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EcoFoG @ webmaster @ |
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602 |
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Ezanno, P.; Aubry-Kientz, M.; Arnoux, S.; Cailly, P.; L'Ambert, G.; Toty, C.; Balenghien, T.; Tran, A. |
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A generic weather-driven model to predict mosquito population dynamics applied to species of Anopheles, Culex and Aedes genera of southern France |
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Journal Article |
| Year |
2015 |
Publication |
Preventive Veterinary Medicine |
Abbreviated Journal |
Preventive Veterinary Medicine |
| Volume |
120 |
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1 |
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39-50 |
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Mathematical modelling; Mosquito; Population dynamics; Seasonality; Sensitivity analysis; Surveillance |
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An accurate understanding and prediction of mosquito population dynamics are needed to identify areas where there is a high risk of mosquito-borne disease spread and persistence. Simulation tools are relevant for supporting decision-makers in the surveillance of vector populations, as models of vector population dynamics provide predictions of the greatest risk periods for vector abundance, which can be particularly helpful in areas with a highly variable environment. We present a generic weather-driven model of mosquito population dynamics, which was applied to one species of each of the genera Anopheles, Culex, and Aedes, located in the same area and thus affected by similar weather conditions. The predicted population dynamics of Anopheles hyrcanus, Culex pipiens, and Aedes caspius were not similar. An. hyrcanus was abundant in late summer. Cx. pipiens was less abundant but throughout the summer. The abundance of both species showed a single large peak with few variations between years. The population dynamics of Ae. caspius showed large intra- and inter-annual variations due to pulsed egg hatching. Predictions of the model were compared to longitudinal data on host-seeking adult females. Data were previously obtained using CDC-light traps baited with carbon dioxide dry ice in 2005 at two sites (. Marais du Viguerat and Tour Carbonnière) in a favourable temperate wetland of southern France (Camargue). The observed and predicted periods of maximal abundance for An. hyrcanus and Cx. pipiens tallied very well. Pearson's coefficients for these two species were over 75% for both species. The model also reproduced the major trends in the intra-annual fluctuations of Ae. caspius population dynamics, with peaks occurring in early summer and following the autumn rainfall events. Few individuals of this species were trapped so the comparison of predicted and observed dynamics was not relevant. A global sensitivity analysis of the species-specific models enabled us to identify the parameters most influencing the maximal abundance of mosquitoes. These key parameters were almost similar between species, but not with the same contributions. The emergence of adult mosquitoes was identified as a key process in the population dynamics of all of the three species considered here. Parameters associated with adult emergence therefore need to be precisely known to achieve accurate predictions. Our model is a flexible and efficient tool that predicts mosquito abundance based on local environmental factors. It is useful to and already used by a mosquito surveillance manager in France. © 2015 Elsevier B.V. |
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Université des Antilles et de la Guyane, UMR 'Ecologie des Forêts de Guyane'Kourou, France |
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Cited By :1; Export Date: 18 May 2015 |
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EcoFoG @ webmaster @ |
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603 |
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Young, E.F.; Belchier, M.; Hauser, L.; Horsburgh, G.J.; Meredith, M.P.; Murphy, E.J.; Pascoal, S.; Rock, J.; Tysklind, N.; Carvalho, G.R. |
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Oceanography and life history predict contrasting genetic population structure in two Antarctic fish species |
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Journal Article |
| Year |
2015 |
Publication |
Evolutionary Applications |
Abbreviated Journal |
Evolutionary Applications |
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8 |
Issue |
5 |
Pages |
486-509 |
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Notothenia rossii; Champsocephalus gunnari; Connectivity; Individual-based Modelling; Ocean circulation; Planktonic dispersal; Population genetics; Scotia Sea |
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Understanding the key drivers of population connectivity in the marine environment is essential for the effective management of natural resources. Although several different approaches to evaluating connectivity have been used, they are rarely integrated quantitatively. Here, we use a 'seascape genetics' approach, by combining oceanographic modelling and microsatellite analyses, to understand the dominant influences on the population genetic structure of two Antarctic fishes with contrasting life histories, Champsocephalus gunnari and Notothenia rossii. The close accord between the model projections and empirical genetic structure demonstrated that passive dispersal during the planktonic early life stages is the dominant influence on patterns and extent of genetic structuring in both species. The shorter planktonic phase of C. gunnari restricts direct transport of larvae between distant populations, leading to stronger regional differentiation. By contrast, geographic distance did not affect differentiation in N. rossii, whose longer larval period promotes long-distance dispersal. Interannual variability in oceanographic flows strongly influenced the projected genetic structure, suggesting that shifts in circulation patterns due to climate change are likely to impact future genetic connectivity and opportunities for local adaptation, resilience and recovery from perturbations. Further development of realistic climate models is required to fully assess such potential impacts. © 2015 The Authors. |
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Campus Agronomique, Kourou Cedex, France |
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Export Date: 28 May 2015 |
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EcoFoG @ webmaster @ |
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604 |
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Dejean, A.; Céréghino, R.; Leponce, M.; Rossi, V.; Roux, O.; Compin, A.; Delabie, J.H.C.; Corbara, B. |
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The fire ant Solenopsis saevissima and habitat disturbance alter ant communities |
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Journal Article |
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2015 |
Publication |
Biological Conservation |
Abbreviated Journal |
Biological Conservation |
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187 |
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145-153 |
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Ant community; Fire ants; Invasive species; Species coexistence; Supercoloniality |
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The fire ant Solenopsis saevissima is a major pest frequent in human-disturbed areas of its native range where it forms 'supercolonies'. We determined that its natural habitat in French Guiana is likely the sporadically flooded riparian forest and aimed to evaluate this ant's impact on the abundance and diversity of other ants by comparing different habitats at two sites. We noted a significant decrease in ant species richness between the rainforest and human-disturbed habitats (but not between the former and the naturally disturbed riparian forest), and between extreme habitats and all others. The number of ant nests per surface unit (i.e., quadrats of equal surface area), a proxy of ant abundance, globally followed this pattern. S. saevissima was absent from pristine rainforest (as expected) and from extreme habitats, showing the limits of its adaptability, whereas some other native ants can develop in these habitats. Ant species richness was significantly lower in the presence of S. saevissima in the riparian forest, forest edges and meadows, illustrating that this ant species has a negative impact on the ant communities in addition to the impact of natural- and man-made disturbances. Only some ant species can develop in its presence, and certain of these can even thrive. Because it has been recorded in Africa, Guadeloupe and the Galápagos Islands, we concluded that, due to the increasing volume of global trade and forest destruction, S. saevissima could become a pantropical invasive species. © 2015 Elsevier Ltd. |
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Université Clermont Auvergne, Université Blaise Pascal (LMGE), Clermont-Ferrand, France |
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Export Date: 11 June 2015 |
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EcoFoG @ webmaster @ |
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605 |
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Talaga, S.; Delabie, J.H.C.; Dezerald, O.; Salas-Lopez, A.; Petitclerc, F.; Leroy, C.; Herault, B.; Céréghino, R.; Dejean, A. |
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A bromeliad species reveals invasive ant presence in urban areas of French Guiana |
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Journal Article |
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2015 |
Publication |
Ecological Indicators |
Abbreviated Journal |
Ecological Indicators |
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58 |
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1-7 |
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Aechmea aquilega; Bioindicators; Non-specific ant-plant relationships; Surrogacy; Tank bromeliads; Urban ecology |
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Tank bromeliads, frequently associated with ants, are considered 'biodiversity amplifiers' for both aquatic and terrestrial organisms, and thus have a high ecological value. The focal species of this study, Aechmea aquilega, sheltered the colonies of 12 ant species in a Guianese rural habitat where Odontomachus haematodus, associated with 60% of these plants, was the most frequent. Unexpectedly, the ant species richness was higher in a compared urban habitat with 21 species, but two synanthropic and four invasive ants were noted among them. Consequently, we conducted baiting surveys (on the ground, on trees and on trees bearing A. aquilega) as well as complementary surveys using different sampling modes in urban areas to test if A. aquilega is a surrogate revealing the presence of certain invasive ants. During the baiting survey, we recorded four Neotropical and eight introduced invasive ants out of a total of 69 species. Of these 12 invasive species, five were noted by baiting A. aquilega (including two only noted in this way). A bootstrap simulation permitted us to conclude that A. aquilega significantly concentrates certain species of invasive ants. This was confirmed by complementary surveys, where we did not record further species. We conclude that baiting on trees bearing large epiphytes in human-modified, Neotropical areas is a relevant complement to the early detection of invasive ants. © 2015 Elsevier Ltd. All rights reserved. |
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CNRS Ecolab (UMR-CNRS 5245), 118 Route de Narbonne, Toulouse, France |
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Export Date: 23 June 2015 |
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EcoFoG @ webmaster @ |
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607 |
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Aubry-Kientz, M.; Rossi, V.; Boreux, J.-J.; Herault, B. |
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A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics |
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Journal Article |
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2015 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecology and Evolution |
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5 |
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12 |
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2457-2465 |
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Bayesian framework; Estimation method; Individual-based model; Linked models; Mcmc; Paracou; Tropical forest dynamic |
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Tree vigor is often used as a covariate when tree mortality is predicted from tree growth in tropical forest dynamic models, but it is rarely explicitly accounted for in a coherent modeling framework. We quantify tree vigor at the individual tree level, based on the difference between expected and observed growth. The available methods to join nonlinear tree growth and mortality processes are not commonly used by forest ecologists so that we develop an inference methodology based on an MCMC approach, allowing us to sample the parameters of the growth and mortality model according to their posterior distribution using the joint model likelihood. We apply our framework to a set of data on the 20-year dynamics of a forest in Paracou, French Guiana, taking advantage of functional trait-based growth and mortality models already developed independently. Our results showed that growth and mortality are intimately linked and that the vigor estimator is an essential predictor of mortality, highlighting that trees growing more than expected have a far lower probability of dying. Our joint model methodology is sufficiently generic to be used to join two longitudinal and punctual linked processes and thus may be applied to a wide range of growth and mortality models. In the context of global changes, such joint models are urgently needed in tropical forests to analyze, and then predict, the effects of the ongoing changes on the tree dynamics in hyperdiverse tropical forests. © 2015 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. |
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Département des Sciences et Gestion de l'environnement, Université de Liège, Arlon, Belgium |
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Export Date: 3 July 2015 |
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EcoFoG @ webmaster @ |
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608 |
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Paine, C.E.T.; Amissah, L.; Auge, H.; Baraloto, C.; Baruffol, M.; Bourland, N.; Bruelheide, H.; Daïnou, K.; de Gouvenain, R.C.; Doucet, J.-L.; Doust, S.; Fine, P.V.A.; Fortunel, C.; Haase, J.; Holl, K.D.; Jactel, H.; Li, X.; Kitajima, K.; Koricheva, J.; Martínez-Garza, C.; Messier, C.; Paquette, A.; Philipson, C.; Piotto, D.; Poorter, L.; Posada, J.M.; Potvin, C.; Rainio, K.; Russo, S.E.; Ruiz-Jaen, M.; Scherer-Lorenzen, M.; Webb, C.O.; Wright, S.J.; Zahawi, R.A.; Hector, A. |
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Globally, functional traits are weak predictors of juvenile tree growth, and we do not know why |
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Journal Article |
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2015 |
Publication |
Journal of Ecology |
Abbreviated Journal |
Journal of Ecology |
| Volume |
103 |
Issue |
4 |
Pages |
978-989 |
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Functional ecology; FunDivEurope; Growth; Hierarchical models; Plant population and community dynamics; Relative growth rate; Size-standardized growth rate; TreeDivNet |
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Plant functional traits, in particular specific leaf area (SLA), wood density and seed mass, are often good predictors of individual tree growth rates within communities. Individuals and species with high SLA, low wood density and small seeds tend to have faster growth rates. If community-level relationships between traits and growth have general predictive value, then similar relationships should also be observed in analyses that integrate across taxa, biogeographic regions and environments. Such global consistency would imply that traits could serve as valuable proxies for the complex suite of factors that determine growth rate, and, therefore, could underpin a new generation of robust dynamic vegetation models. Alternatively, growth rates may depend more strongly on the local environment or growth-trait relationships may vary along environmental gradients. We tested these alternative hypotheses using data on 27 352 juvenile trees, representing 278 species from 27 sites on all forested continents, and extensive functional trait data, 38% of which were obtained at the same sites at which growth was assessed. Data on potential evapotranspiration (PET), which summarizes the joint ecological effects of temperature and precipitation, were obtained from a global data base. We estimated size-standardized relative height growth rates (SGR) for all species, then related them to functional traits and PET using mixed-effect models for the fastest growing species and for all species together. Both the mean and 95th percentile SGR were more strongly associated with functional traits than with PET. PET was unrelated to SGR at the global scale. SGR increased with increasing SLA and decreased with increasing wood density and seed mass, but these traits explained only 3.1% of the variation in SGR. SGR-trait relationships were consistently weak across families and biogeographic zones, and over a range of tree statures. Thus, the most widely studied functional traits in plant ecology were poor predictors of tree growth over large scales. Synthesis. We conclude that these functional traits alone may be unsuitable for predicting growth of trees over broad scales. Determining the functional traits that predict vital rates under specific environmental conditions may generate more insight than a monolithic global relationship can offer. The most widely studied functional traits in plant ecology, specific leaf area, wood density and seed mass, were only weakly associated with tree growth rates over broad scales. Assessing trait-growth relationships under specific environmental conditions may generate more insight than a global relationship can offer. © 2015 British Ecological Society. |
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Department of Plant Sciences, University of Oxford, Oxford, United Kingdom |
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Export Date: 3 July 2015 |
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EcoFoG @ webmaster @ |
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609 |
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Morel, H.; Mangenet, T.; Beauchene, J.; Ruelle, J.; Nicolini, E.; Heuret, P.; Thibaut, B. |
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Seasonal variations in phenological traits: leaf shedding and cambial activity in Parkia nitida Miq. and Parkia velutina Benoist (Fabaceae) in tropical rainforest |
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Journal Article |
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2015 |
Publication |
Trees – Structure and Function |
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Trees – Structure and Function |
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29 |
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4 |
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973-984 |
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Cambial activity; Climate; French Guiana; Leaf shedding pattern; Tropical rainforest |
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Key message: In French Guiana, the leaf and cambium phenologies should not be considered only as exogenous-driven processes, as the dry season, but also as endogenous-driven, as tree development stage. Abstract: Studies of the periodicity of wood formation provide essential data on tree age and on factors that control tree growth. The aim of this work was to investigate cambial phenology and its relation with leaf phenology and climatic seasonality in two briefly deciduous tropical rainforest species belonging to the genus Parkia. Wood microcores were collected every 15 days from April 2009 to February 2012 from five trees of each species. The microcores were stained with cresyl violet acetate to facilitate counting the number of cells in the cambial zone, in the radial enlargement zone and wall-thickening zone. At the same time, we observed leaf shedding pattern in the crown of the same trees. In both species, cambial activity was significantly reduced during the leafless period. In P. nitida, these two concomitant events were observed during the dry season whereas in P. velutina they can occur anytime in the year with no apparent link with seasonality. In conclusion, the period of reduced cambial activity in some tropical rainforest trees may be independent of rainfall seasonality and not necessarily follow an annual cycle. It appears that leaf phenology is a good proxy to estimate cambial activity. © 2015, Springer-Verlag Berlin Heidelberg. |
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CNRS, UMR Laboratoire de Mécanique et Génie Civil de Montpellier, Montpellier, France |
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Export Date: 16 July 2015 |
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EcoFoG @ webmaster @ |
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610 |
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Leclerc, T.; Vimal, R.; Troispoux, V.; Périgon, S.; Scotti, I. |
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Life after disturbance (I): changes in the spatial genetic structure of Jacaranda copaia (Aubl.) D. Don (Bignonianceae) after logging in an intensively studied plot in French Guiana |
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Journal Article |
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2015 |
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Annals of Forest Science |
Abbreviated Journal |
Annals of Forest Science |
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72 |
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5 |
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509-516 |
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Amazon; Bayesian clustering; Demogenetics; Guiana shield; Parentage analysis; Regeneration; Spatial genetic structure; Tropical rainforest |
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Key message: Forest disturbance affects the within-population distribution of genetic diversity, but not its overall levels, in a tropical pioneer tree species. In particular, clumps of related saplings with impoverished diversity are found in canopy gaps but not under forest cover. Context: Forest disturbances can have long-term consequences on the genetic structure of tree populations, because they can alter the demographic properties of the regeneration process and favour some subpopulations/genotypes, both by stochastic processes and by selection. Intermediate disturbances tend to favour species diversity, at least in highly diverse communities, but their effect on intra-specific diversity is unknown. Aims: In this study, we have looked at the genetic consequences of forest disturbance in a stand of the long-lived Neotropical pioneer species, Jacaranda copaia. Methods: The study site was experimentally logged in 1984, and the canopy gaps generated by the logging were mapped. Seedlings of J. copaia colonised the gaps, as expected, at a higher density than in the surrounding forest. In 2006, we exhaustively sampled all saplings and adult trees available in a 25-ha area. The samples were genotyped at nine microsatellite loci, and the distribution of genetic diversity was inspected by analyses of spatial autocorrelation, automated Bayesian assignment and comparisons of diversity between cohorts by bootstrap (RaBoT). Results: Spatial autocorrelation was found to extend farther in post-disturbance saplings than in the undisturbed population (100 m and beyond versus less than 50 m), and divergent clumps (F<inf>ST</inf> = 0.05) of related genotypes were found; genetic diversity was found to be impoverished in each clump relative to the global population at about half of the loci. Conclusion: Overall, our results suggest that forest disturbance has changed the patterns of distribution of genetic diversity, with potential consequences on long-term population viability. © 2015, INRA and Springer-Verlag France. |
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INRA, URFM « Ecologie des Forêts Méditerranéennes », Domaine de Saint-Paul, Avignon, France |
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Export Date: 16 July 2015 |
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EcoFoG @ webmaster @ |
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611 |
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Leba, L.-J.; Musset, L.; Pelleau, S.; Estevez, Y.; Birer, C.; Briolant, S.; Witkowski, B.; Ménard, D.; Delves, M.J.; Legrand, E.; Duplais, C.; Popovici, J. |
| Title |
Use of Plasmodium falciparum culture-adapted field isolates for in vitro exflagellation-blocking assay |
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Journal Article |
| Year |
2015 |
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Malaria Journal |
Abbreviated Journal |
Malaria Journal |
| Volume |
14 |
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234 |
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| Abstract |
Background: A major requirement for malaria elimination is the development of transmission-blocking interventions. In vitro transmission-blocking bioassays currently mostly rely on the use of very few Plasmodium falciparum reference laboratory strains isolated decades ago. To fill a piece of the gap between laboratory experimental models and natural systems, the purpose of this work was to determine if culture-adapted field isolates of P. falciparum are suitable for in vitro transmission-blocking bioassays targeting functional maturity of male gametocytes: exflagellation. Methods: Plasmodium falciparum isolates were adapted to in vitro culture before being used for in vitro gametocyte production. Maturation was assessed by microscopic observation of gametocyte morphology over time of culture and the functional viability of male gametocytes was assessed by microscopic counting of exflagellating gametocytes. Suitability for in vitro exflagellation-blocking bioassays was determined using dihydroartemisinin and methylene blue. Results: In vitro gametocyte production was achieved using two isolates from French Guiana and two isolates from Cambodia. Functional maturity of male gametocytes was assessed by exflagellation observations and all four isolates could be used in exflagellation-blocking bioassays with adequate response to methylene blue and dihydroartemisinin. Conclusion: This work shows that in vitro culture-adapted P. falciparum field isolates of different genetic background, from South America and Southeast Asia, can successfully be used for bioassays targeting the male gametocyte to gamete transition, exflagellation. © 2015 Leba et al. |
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Department of Life Sciences, Imperial College, London, United Kingdom |
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| Notes |
Export Date: 16 July 2015 |
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EcoFoG @ webmaster @ |
Serial |
612 |
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