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Hardy, O.J.; Maggia, L.; Bandou, E.; Breyne, P.; Caron, H.; Chevallier, M.H.; Doligez, A.; Dutech, C.; Kremer, A.; Latouche-Halle, C.; Troispoux, V.; Veron, V.; Degen, B. |
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Title |
Fine-scale genetic structure and gene dispersal inferences in 10 Neotropical tree species |
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Journal Article |
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Year |
2006 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
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Volume |
15 |
Issue |
2 |
Pages |
559-571 |
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Keywords |
French Guiana; gene dispersal; seed dispersal; spatial genetic structure; tropical trees |
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The extent of gene dispersal is a fundamental factor of the population and evolutionary dynamics of tropical tree species, but directly monitoring seed and pollen movement is a difficult task. However, indirect estimates of historical gene dispersal can be obtained from the fine-scale spatial genetic structure of populations at drift-dispersal equilibrium. Using an approach that is based on the slope of the regression of pairwise kinship coefficients on spatial distance and estimates of the effective population density, we compare indirect gene dispersal estimates of sympatric populations of 10 tropical tree species. We re-analysed 26 data sets consisting of mapped allozyme, SSR (simple sequence repeat), RAPD (random amplified polymorphic DNA) or AFLP (amplified fragment length polymorphism) genotypes from two rainforest sites in French Guiana. Gene dispersal estimates were obtained for at least one marker in each species, although the estimation procedure failed under insufficient marker polymorphism, limited sample size, or inappropriate sampling area. Estimates generally suffered low precision and were affected by assumptions regarding the effective population density. Averaging estimates over data sets, the extent of gene dispersal ranged from 150 m to 1200 m according to species. Smaller gene dispersal estimates were obtained in species with heavy diaspores, which are presumably not well dispersed, and in populations with high local adult density. We suggest that limited seed dispersal could indirectly limit effective pollen dispersal by creating higher local tree densities, thereby increasing the positive correlation between pollen and seed dispersal distances. We discuss the potential and limitations of our indirect estimation procedure and suggest guidelines for future studies. |
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Univ Libre Bruxelles, Serv Ecoethol Evolut, B-1050 Brussels, Belgium, Email: ohardy@ulb.ac.be |
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BLACKWELL PUBLISHING |
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0962-1083 |
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ISI:000235045500021 |
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EcoFoG @ eric.marcon @ |
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183 |
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Foucaud, J.; Orivel, J.; Fournier, D.; Delabie, J.H.C.; Loiseau, A.; Le Breton, J.; Cerdan, P.; Estoup, A. |
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Title |
Reproductive system, social organization, human disturbance and ecological dominance in native populations of the little fire ant, Wasmannia auropunctata |
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Journal Article |
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Year |
2009 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
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Volume |
18 |
Issue |
24 |
Pages |
5059-5073 |
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Keywords |
biological invasion; clonality; human disturbance; parthenogenesis; social organization; Wasmannia auropunctata |
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Abstract |
The invasive ant species Wasmannia auropunctata displays both ecologically dominant and non-dominant populations within its native range. Three factors could theoretically explain the ecological dominance of some native populations of W. auropunctata: (i) its clonal reproductive system, through demographic and/or adaptive advantages; (ii) its unicolonial social organization, through lower intraspecific and efficient interspecific competition; (iii) the human disturbance of its native range, through the modification of biotic and abiotic environmental conditions. We used microsatellite markers and behavioural tests to uncover the reproductive modes and social organization of dominant and non-dominant native populations in natural and human-modified habitats. Microsatellite and mtDNA data indicated that dominant and non-dominant native populations (supercolonies as determined by aggression tests) of W. auropunctata did not belong to different evolutionary units. We found that the reproductive system and the social organization are neither necessary nor sufficient to explain W. auropunctata ecological dominance. Dominance rather seems to be set off by unknown ecological factors altered by human activities, as all dominant populations were recorded in human-modified habitats. The clonal reproductive system found in some populations of W. auropunctata may however indirectly contribute to its ecological dominance by allowing the species to expand its environmental niche, through the fixation over time of specific combinations of divergent male and female genotypes. Unicoloniality may rather promote the range expansion of already dominant populations than actually trigger ecological dominance. The W. auropunctata model illustrates the strong impact of human disturbance on species' ecological features and the adaptive potential of clonal reproductive systems. |
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[Foucaud, Julien; Fournier, Denis; Loiseau, Anne; Estoup, Arnaud] Montpellier SupAgro, Cirad, IRD, INRA,UMR CBGP, F-34988 Montferrier Sur Lez, France, Email: julien.foucaud@legs.cnrs-gif.fr |
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WILEY-BLACKWELL PUBLISHING, INC |
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0962-1083 |
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ISI:000272452700009 |
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EcoFoG @ eric.marcon @ |
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191 |
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Latouche-Halle, C.; Ramboer, A.; Bandou, E.; Caron, H.; Kremer, A. |
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Title |
Long-distance pollen flow and tolerance to selfing in a neotropical tree species |
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Journal Article |
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Year |
2004 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
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Volume |
13 |
Issue |
5 |
Pages |
1055-1064 |
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Keywords |
Dicorynia guianensis; microsatellites; outcrossing rate; pollen flow; reproductive success; tropical tree |
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Outcrossing rates, pollen dispersal and male mating success were assessed in Dicorynia guianensis Amshoff, a neotropical tree endemic to the Guiana shield. All adult trees within a continuous area of 40 ha (n = 157) were mapped, and were genotyped with six microsatellite loci. In addition, progenies were genotyped from 22 mature trees. At the population level, the species was mostly outcrossing (t(m) = 0.89) but there was marked variation among individuals. One tree exhibited mixed mating, confirming earlier results obtained with isozymes that D. guianensis can tolerate selfing. A Bayesian extension of the fractional paternity method was used for paternity analysis, and was compared with the neighbourhood method used widely for forest trees. Both methods indicated that pollen dispersal was only weakly related to distance between trees within the study area, and that the majority (62%) of pollen came from outside the study stand. Using maximum likelihood, male potential population size was estimated to be 1119, corresponding to a neighbourhood size of 560 hectares. Male mating success was, however, related to the diameter of the stem and to flowering intensity assessed visually. The mating behaviour of D. guianensis is a combination of long-distance pollen flow and occasional selfing. The species can still reproduce when it is extremely rare, either by selfing or by dispersing pollen at long distances. These results, together with the observation that male mating success was correlated with the size of the trees, could be implemented in management procedures aiming at regenerating the species. |
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INRA, UMR Ecol Forets Guyane, F-97387 Kourou, France, Email: caron@pierroton.mra.fr |
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BLACKWELL PUBLISHING LTD |
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0962-1083 |
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ISI:000221016300007 |
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EcoFoG @ eric.marcon @ |
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237 |
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Dutech, C.; Seiter, J.; Petronelli, P.; Joly, H.I.; Jarne, P. |
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Title |
Evidence of low gene flow in a neotropical clustered tree species in two rainforest stands of French Guiana |
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Journal Article |
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Year |
2002 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
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Volume |
11 |
Issue |
4 |
Pages |
725-738 |
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Keywords |
Caesalpiniaceae; gene flow; recolonization process; spatial genetic structure; tropical rainforest; Vouacapoua americana |
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Abstract |
The spatial genetic structure of the neotropical, clustered tree species Vouacapoua americana (Aublet) was studied in two natural forest stands (Paracou and Nouragues) in French Guiana. Using eight microsatellite loci, V. americana is characterized by a marked genetic structure at small spatial distances (under 30-60 m), in agreement with the limited seed dispersal by rodent species. Gene flow through pollen is also shown to be mainly restricted to less than 100 m. This result suggests that most pollination events (mediated through small insects) are probably limited to within-patches of individuals, which might explain the high genetic differentiation among patches (F-ST = 0.11) separated by less than 2 km. We also assume that stronger genetic structure in Paracou is likely to be due to lower seed dispersal by rodents, large spatial distances separating patches, or a recent recolonization event. |
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CNRS, Ctr Ecol Fonct & Evolut, F-34293 Montpellier 5, France, Email: jarne@cefe.cnrs-mop.fr |
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BLACKWELL PUBLISHING LTD |
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0962-1083 |
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ISI:000175250300008 |
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EcoFoG @ eric.marcon @ |
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248 |
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Zinger, L.; Taberlet, P.; Schimann, H.; Bonin, A.; Boyer, F.; De Barba, M.; Gaucher, P.; Gielly, L.; Giguet-Covex, C.; Iribar, A.; Réjou-Méchain, M.; Rayé, G.; Rioux, D.; Schilling, V.; Tymen, B.; Viers, J.; Zouiten, C.; Thuiller, W.; Coissac, E.; Chave, J. |
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Title |
Body size determines soil community assembly in a tropical forest |
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Journal Article |
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2019 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol Ecol |
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Volume |
28 |
Issue |
3 |
Pages |
528-543 |
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DNA metabarcoding; eDNA; French Guiana; multitaxa; neutral assembly; niche determinism; propagule size; soil diversity |
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Tropical forests shelter an unparalleled biological diversity. The relative influence of environmental selection (i.e., abiotic conditions, biotic interactions) and stochastic?distance-dependent neutral processes (i.e., demography, dispersal) in shaping communities has been extensively studied for various organisms, but has rarely been explored across a large range of body sizes, in particular in soil environments. We built a detailed census of the whole soil biota in a 12-ha tropical forest plot using soil DNA metabarcoding. We show that the distribution of 19 taxonomic groups (ranging from microbes to mesofauna) is primarily stochastic, suggesting that neutral processes are prominent drivers of the assembly of these communities at this scale. We also identify aluminium, topography and plant species identity as weak, yet significant drivers of soil richness and community composition of bacteria, protists and to a lesser extent fungi. Finally, we show that body size, which determines the scale at which an organism perceives its environment, predicted the community assembly across taxonomic groups, with soil mesofauna assemblages being more stochastic than microbial ones. These results suggest that the relative contribution of neutral processes and environmental selection to community assembly directly depends on body size. Body size is hence an important determinant of community assembly rules at the scale of the ecological community in tropical soils and should be accounted for in spatial models of tropical soil food webs. |
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John Wiley & Sons, Ltd (10.1111) |
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0962-1083 |
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EcoFoG @ webmaster @ |
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873 |
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Author |
Salvin, P.; Roos, C.; Robert, F. |
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Title |
Tropical mangrove sediments as a natural inoculum for efficient electroactive biofilms |
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Journal Article |
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Year |
2012 |
Publication |
Bioresource Technology |
Abbreviated Journal |
Bioresour. Technol. |
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120 |
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45-51 |
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Chronoamperometry; Cyclic voltammetry; Electroactive biofilms; Microbial fuel cells; Three-electrode systems |
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Chronoamperometry is known to be an efficient way to form electroactive biofilms (EAB) on conductive electrodes. For the first time, tropical mangrove sediments are analyzed as a potential inoculum to form MFC anodes with the use of acetate as substrate. The performance of the EAB-coated carbon cloth electrodes are evaluated according to the maximal current density, the coulombic efficiency and the cyclic voltammogramms. Working electrodes (WE) polarized at -0.2V/SCE gave better results compared to -0.4V/SCE and 0.0V/SCE. The maximal current density attained was 12A/m 2 with a CE of 24%. Contributions of the EAB in the generation of current were discussed and mechanisms of electronic transfer by the bacteria were discussed. Epifluorescence and SEM images showed the evolution of the biofilms on the electrode surface and the heterogeneity of the structure. © 2012 Elsevier Ltd. |
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Laboratoire des Matériaux et des Molécules en Milieu Amazonien, Université des Antilles et de la Guyane, UAG-UMR ECOFOG, F-97337 Cayenne, French Guiana |
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09608524 (Issn) |
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Export Date: 16 August 2012; Source: Scopus; Coden: Birte; doi: 10.1016/j.biortech.2012.05.131; Language of Original Document: English; Correspondence Address: Robert, F.; Laboratoire des Matériaux et des Molécules en Milieu Amazonien, Université des Antilles et de la Guyane, UAG-UMR ECOFOG, F-97337 Cayenne, French Guiana; email: florent.robert@guyane.univ-ag.fr |
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EcoFoG @ webmaster @ |
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421 |
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Charles-Dominique, P.; Chave, J.; Dubois, M.A.; De Granville, J.J.; Riera, B.; Vezzoli, C. |
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Title |
Colonization front of the understorey palm Astrocaryum sciophilum in a pristine rain forest of French Guiana |
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Journal Article |
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Year |
2003 |
Publication |
Global Ecology and Biogeography |
Abbreviated Journal |
Glob. Ecol. Biogeogr. |
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Volume |
12 |
Issue |
3 |
Pages |
237-248 |
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Astrocaryum sciophilum; French Guiana; neotropical palaeoecology; palm ecology; population edge; refuges; scatter-hoarding; seed dispersal; spatial pattern |
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Aims Astrocaryum sciophilum (Miq.) Pulle (Arecaceae) is an understorey palm, endemic to north-eastern South America with a patchy distribution. We tested the hypothesis that the spatial distribution of this palm species is not in equilibrium but is slowly colonizing the forest understorey. Location Inventories and seed dispersal studies were conducted in the undisturbed tropical forest close to the Nouragues research station, French Guiana. Additional data were collected in the entire territory of French Guiana. Methods We studied the demography of A. sciophilum on a 20-ha plot located at the edge of its distribution. The age of the palms was estimated by postulating an exponentially decreasing abundance by age class. Direct seed dispersal experiments were also conducted, to estimate dispersal parameters. The seeds of A. sciophilum were dispersed only by rodents. This information was used to parameterize a forest growth simulator, to study the spatial spread of this species. Results Within the sampling plot, the density of A. sciophilum dropped sharply from about 500 individuals per hectare to zero. The maturation age was estimated to be 170+/-70 years, and over 55 years with 95% confidence. Seed-dispersal experiments yielded an average seed dispersal distance of 11 m and a maximum estimated dispersal distance of 125 m across a generational span of 55 years to maturity. Therefore, the maximal estimated colonization speed is 2.3 m/y. Conclusions Empirical results and numerical simulations suggest that the boundary of the A. sciophilum population is a colonization front, and that the range of this species is slowly expanding. The implications of this result in respect of palaeoenvironmental changes in this region are discussed. |
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Natl Museum Nat Hist, Lab Ecol Gen, F-91800 Brunoy, France |
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BLACKWELL PUBLISHING LTD |
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0960-7447 |
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ISI:000182184100006 |
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EcoFoG @ eric.marcon @ |
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273 |
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Author |
Herault, B.; Thoen, D. |
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Title |
Diversity of plant assemblages in isolated depressional wetlands from Central-Western Europe |
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Journal Article |
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2008 |
Publication |
Biodiversity and Conservation |
Abbreviated Journal |
Biodivers. Conserv. |
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17 |
Issue |
9 |
Pages |
2169-2183 |
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closed depressions; connectivity; fens; forest; grassland; habitat area; landscape matrix |
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Abstract |
A closed depression is defined as a geomorphologic element where a sediment depository is encircled by hillslopes. Despite the fact that closed depressions are often the only stagnant water points in many European landscapes, few ecological researches on their plant assemblages have been done. The main goal of this study was to give first results of the environmental factors responsible for the vegetation composition, richness and rarity in the closed depressions of the Lorraine biogeographical district (Belgium, France and grand-duche de Luxembourg). We surveyed for plant presence 85 forest and 77 grassland closed depressions. For each site, wetland area, local environmental factors and regional connectivities registered. For each species, the Ellenberg values were compiled. To investigate the main source of variation in species composition and in species richness (including richness in rare species), Non-metric Multidimensional Scaling analyses and Generalized Linear Models were respectively used. Species pools in forest (forest and preforest species) and in grassland (bog plants, pioneers, helophytes) were quite different. In both landscapes, a gradient from plants typical of basic high-productive soils to plants typical of acid low-productive soils reflects a shared successional gradient. The accumulation of organic matter allowed the establishment of Sphagnum spp., which slowly acidified the soil and thus acted as ecosystem engineers for the arrival of bog plants. Moreover, the species composition was additionally driven by the plant light tolerance in forests and by the plant water requirements in grasslands. Mechanisms of species accumulation (increase in species richness) were different in forests and in grasslands: respectively related to the plant light tolerance and to the wetland area. At the regional level, the averaged soil productivity was negatively related to the richness in rare species. Indeed, perennial highly-competitive plants such as Glyceria spp., Iris pseudacorus or Urtica dioica impeded the establishment of smaller and rarer species. At the habitat level, isolated closed depressions (due to either low connectivity or low grazing pressure) have more habitat rare species, giving evidences of dispersal limitation in plant assemblages of closed depressions. |
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[Herault, Bruno] Inst Bot, Ctr Ecol Vegetale & Hydrol, F-67083 Strasbourg, France, Email: bruno.herault@cirad.fr |
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SPRINGER |
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0960-3115 |
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ISI:000257486400008 |
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EcoFoG @ eric.marcon @ |
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135 |
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Sist, P.; Brown, N. |
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Title |
Silvicultural intensification for tropical forest conservation: a response to Fredericksen and Putz |
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Journal Article |
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Year |
2004 |
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Biodiversity and Conservation |
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13 |
Issue |
12 |
Pages |
2381-2385 |
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0960-3115 |
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WOS:000225691300011 |
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EcoFoG @ webmaster @ |
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308 |
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Robillard, T.; ter Hofstede, H.M.; Orivel, J.; Vicente, N.M. |
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Title |
Bioacoustics of the Neotropical Eneopterinae (Orthoptera, Grylloidea, Gryllidae) |
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Journal Article |
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2015 |
Publication |
Bioacoustics |
Abbreviated Journal |
Bioacoustics |
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24 |
Issue |
2 |
Pages |
123-143 |
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Abstract |
In members of the cricket subfamily Eneopterinae (Orthoptera, Grylloidea), songs with powerful high-frequency (HF) harmonics have evolved, which likely represents a distinctive acoustic adaptation. In this study, we analysed or reanalysed the songs of the three eneopterine genera present in the Neotropics to evaluate whether they also possess high-amplitude HF components. We present new data and combine several lines of evidence to interpret or reinterpret the calling signals of a representative species for each genus. We used new recordings in order to detect and analyse potential HF components of the songs. Stridulatory files were measured, and stridulation was studied using high-speed video recordings. The results suggest that all eneopterine genera from the Neotropics use HFs to communicate, based on the rich harmonic content of their songs. Strikingly, the Neotropical eneopterines possess high dominant frequencies, recalling the patterns observed in the tribe Lebinthini, the most speciose tribe of the subfamily distributed in the Western Pacific region and in Southeast Asia: Ligypterus and Ponca show dominant harmonic peaks, whereas Eneoptera possesses unique features. The three species under study, however, deal differently with HFs. |
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Taylor & Francis |
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0952-4622 |
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doi: 10.1080/09524622.2014.996915 |
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EcoFoG @ webmaster @ |
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651 |
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