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Author |
Schimann, H.; Joffre, R.; Roggy, J.C.; Lensi, R.; Domenach, A.M. |
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Title |
Evaluation of the recovery of microbial functions during soil restoration using near-infrared spectroscopy |
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Journal Article |
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Year |
2007 |
Publication |
Applied Soil Ecology |
Abbreviated Journal |
Appl. Soil Ecol. |
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Volume |
37 |
Issue |
3 |
Pages |
223-232 |
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Keywords |
NIRS; microbial activities; respiration; denitrification; carbon; nitrogen; soil functioning; restoration |
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Abstract |
Microbial-based indicators, such as C and N contents or microbial functions involved in C and N cycles, are currently used to describe the status of soils in disturbed areas. Microbial functions are more accurate indicators but their measurement for studies at the ecosystem level remains problematical because of the huge spatial variability of these processes and, consequently, of the large number of soil samples which must be analyzed. Our goal was to test the capacity of near-infrared reflectance spectroscopy (NIRS) to predict respiration and denitrification but also carbon and nitrogen contents of soils submitted to various procedures of restoration. To achieve this objective, we took advantage of an experiment conducted on a reforestation system established after open-cast gold mining in French Guiana. In this experimental station, plantations of various ages and various soil textures were at our disposal. Our results showed that both plantations and soil texture had a strong impact on the recovery of soil functioning: carbon and nitrogen contents, respiration and denitrification increased with age of plantation and clay content. Calibrations were performed between spectral data and microbial-based indicators using partial least squares regression (PLS). The results showed that C and N contents were accurately predicted. Microbial functions were less precisely predicted with results more accurate on clayey soils than on sandy soils. In clayey soils, perturbed or restored soils and the year of plantation were discriminated very efficiently through principal component analyses of spectral signatures (over 80% of variance explained on the first two axes). Near-infrared spectroscopy may thus be extended to the prediction of functional soil parameters, but the capacity of this method must be strengthened by expending the databases with other soils in other contexts. The possibility of using NIRS provides many opportunities for understanding both the temporal dynamics and the spatial variability of the recovery of key microbial functions during soil restoration. (c) 2007 Elsevier B.V. All rights reserved. |
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UMR EcoFoG, Kourou 97387, French Guiana, Email: heidy.schimann@cirad.fr |
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ELSEVIER SCIENCE BV |
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0929-1393 |
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ISI:000250668000006 |
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EcoFoG @ eric.marcon @ |
Serial |
154 |
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Author |
Fang, C.H.; Clair, B.; Gril, J.; Almeras, T. |
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Title |
Transverse shrinkage in G-fibers as a function of cell wall layering and growth strain |
Type |
Journal Article |
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Year |
2007 |
Publication |
Wood Science and Technology |
Abbreviated Journal |
Wood Sci. Technol. |
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Volume |
41 |
Issue |
8 |
Pages |
659-671 |
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Abstract |
Transverse drying shrinkage was measured at microscopic and mesoscopic levels in poplar wood characterised by an increasing growth strain (GS), from normal to tension wood. Results show that: (a) the drying shrinkage, measured as a relative thickness decrease, was significantly higher for G-layer (GL) than for the other layers (OL), GL shrinkage was not significantly correlated with GS, and OL shrinkage was negatively correlated with GS. (b) In gelatinous fibre (G-fibre), lumen size increased during drying and this increase was positively related with GS, but in normal wood fibre, lumen size decreased during drying. These findings suggest that GL shrank outwards (i.e., its internal perimeter increases), so that its shrinkage weakly affected the total cell shrinkage and the mesoscopic shrinkage was controlled by the OL shrinkage which shrank inwards (i.e., its external perimeter decreases). (c) Measurements done on 7 x 7 mm(2) thin sections evidenced a negative correlation between transverse shrinkage and GS, significant in T direction but weak in R direction. These observations at both levels allow to discuss the contribution of GL to the mesoscopic shrinkage of tension wood. |
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Address |
Univ Montpellier 2, Lab Mech & Gene Civil, F-34095 Montpellier, France, Email: fang1979@gmail.com |
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SPRINGER |
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0043-7719 |
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ISI:000250381500003 |
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EcoFoG @ eric.marcon @ |
Serial |
155 |
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Author |
Christensen-Dalsgaard, K.K.; Fournier, M.; Ennos, A.R.; Barfod, A.S. |
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Title |
Changes in vessel anatomy in response to mechanical loading in six species of tropical trees |
Type |
Journal Article |
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Year |
2007 |
Publication |
New Phytologist |
Abbreviated Journal |
New Phytol. |
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Volume |
176 |
Issue |
3 |
Pages |
610-622 |
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Keywords |
hydraulic architecture; hydraulic-mechanical trade-off; mechanical adaptation; rooting morphology; tropical trees; vascular anatomy |
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Abstract |
It is well known that trees adapt their supportive tissues to changes in loading conditions, yet little is known about how the vascular anatomy is modified in this process. We investigated this by comparing more and less mechanically loaded sections in six species of tropical trees with two different rooting morphologies. We measured the strain, vessel size, frequency and area fraction and from this calculated the specific conductivity, then measured the conductivity, modulus of elasticity and yield stress. The smallest vessels and the lowest vessel frequency were found in the parts of the trees subjected to the greatest stresses or strains. The specific conductivity varied up to two orders of magnitude between mechanically loaded and mechanically unimportant parts of the root system. A trade-off between conductivity and stiffness or strength was revealed, which suggests that anatomical alterations occur in response to mechanical strain. By contrast, between-tree comparisons showed that average anatomical features for the whole tree seemed more closely related to their ecological strategy. |
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Address |
Univ Manchester, Fac Life Sci, Manchester M60 1QD, Lancs, England, Email: karen@cd-mail.dk |
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BLACKWELL PUBLISHING |
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ISSN |
0028-646X |
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Notes |
ISI:000250275000013 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
156 |
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Author |
Sierra, J.; Daudin, D.; Domenach, A.M.; Nygren, P.; Desfontaines, L. |
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Title |
Nitrogen transfer from a legume tree to the associated grass estimated by the isotopic signature of tree root exudates: A comparison of the N-15 leaf feeding and natural N-15 abundance methods |
Type |
Journal Article |
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Year |
2007 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Eur. J. Agron. |
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Volume |
27 |
Issue |
2-4 |
Pages |
178-186 |
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Keywords |
agroforestry; box model; gliricidia sepium; N-15 fractionation; root turnover; tree pruning |
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Abstract |
Nitrogen (N) transfer from legume trees to associated crops is a key factor for the N economy of low-input agroforestry systems. In this work, we presented a new approach to estimate N transfer based on the N-15 content of root exudates and N released by root turnover of the donor plant (Gliricidia sepium) and the temporal change of the N-15 content of the receiver plant (Dichanthium aristatum). The study was carried out in greenhouse using two isotopic methods: N-15 leaf feeding (LF) and the natural N-15 abundance (NA). Measurements of exudate N-15 were made at several dates before and after tree pruning. A time-dependent box model was devised to quantify N transfer in time and to make comparisons between the isotopic methods. In NA, although tree roots and exudates presented a similar N-15 signature before tree pruning, exudates were strongly depleted in N-15 after pruning. In LF, exudates were always depleted in N-15 in relation to tree roots. Hence, the current assumption used in N transfer studies concerning the equal N-15/N-14 distribution in tissues of the donor plant and in its excreted N was not confirmed in our study. Before pruning, N transfer functioned as a two-N-source system (soil N and exudates N) and both isotopic methods provided similar estimates: 11-12% for LF and 10-15% for NA. Calculations per-formed with the model indicated that N transfer occurred with small or nil fractionation of N-15 in exudates. After pruning, there was a third N source associated with N released from tree root turnover. During this period, the isotopic signature of the receiver plant showed a transient state due to the progressive decrease of N-15 content of that N source. The amount of N derived from the tree represented 65% of the total N content of the. grass at the end of the experiments. (c) 2007 Elsevier B.V. All rights reserved. |
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Address |
INRA, Unite Agropedioclimat, UR135, Petit Bourg 97170, Guadeloupe, Email: jorge.sierra@antilles.inra.fr |
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ELSEVIER SCIENCE BV |
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ISSN |
1161-0301 |
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Notes |
ISI:000249798900003 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
157 |
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Author |
Ollivier, M.; Baraloto, C.; Marcon, E. |
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Title |
A trait database for Guianan rain forest trees permits intra- and inter-specific contrasts |
Type |
Journal Article |
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Year |
2007 |
Publication |
Annals of Forest Science |
Abbreviated Journal |
Ann. For. Sci. |
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Volume |
64 |
Issue |
7 |
Pages |
781-786 |
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Keywords |
plant traits; tropical forest; French Guiana; functional groups; plasticity; ontogeny |
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Abstract |
We present a plant trait database covering autecology for rain forest trees of French Guiana. The database comprises more than thirty traits including autecology (e. g., habitat associations and reproductive phenology), wood structure (e. g., density and tension characteristics) and physiology at the whole plant (e. g., carbon and nitrogen isotopes) and leaf level (e. g., specific leaf area, photosynthetic capacity). The current database describes traits for about nine hundred species from three hundred genera in one hundred families. For more than sixty species, data on twelve morphological and ecophysiological traits are provided for individual plants under different environmental conditions and at different ontogenetic stages. The database is thus unique in permitting intraspecific analyses, such as the effects of ontogenetic stages or environmental conditions on trait values and their relationships. |
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Address |
INRA, Unit Mixte Rech Ecol Forets Guyane, Kourou, France, Email: baraloto.c@kourou.cirad.fr |
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Publisher |
EDP SCIENCES S A |
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ISSN |
1286-4560 |
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Notes |
ISI:000250097700011 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
158 |
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Author |
Baraloto, C.; Forget, P.M. |
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Title |
Seed size, seedling morphology, and response to deep shade and damage in neotropical rain forest trees |
Type |
Journal Article |
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Year |
2007 |
Publication |
American Journal of Botany |
Abbreviated Journal |
Am. J. Bot. |
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Volume |
94 |
Issue |
6 |
Pages |
901-911 |
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Keywords |
cotyledons; French Guiana; functional morphology; herbivory; life history; phylogeny; regeneration strategy; shade tolerance |
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Abstract |
To investigate the existence of coordinated sets of seedling traits adapted to contrasting establishment conditions, we examined evolutionary convergence in seedling traits for 299 French Guianan woody plant species and the stress response in a shadehouse of species representing seed size gradients within five major cotyledon morphology types. The French Guianan woody plant community has larger seeds than other tropical forest communities and the largest proportion of hypogeal cotyledon type (59.2%) reported for tropical forests. Yet the community includes many species with intermediate size seeds that produce seedlings with different cotyledonal morphologies. A split-plot factorial design with two light levels (0.8% and 16.1% PAR) and four damage treatments (control, seed damage, leaf damage, stem damage) was used in the shadehouse experiment. Although larger-seeded species had higher survival and slower growth, these patterns were better explained by cotyledon type than by seed mass. Even larger-seeded species with foliar cotyledons grew faster than species with reserve-type cotyledons, and survival after stem grazing was five times higher in seedlings with hypogeal cotyledons than with epigeal cotyledons. Thus, to predict seedling performance using seed size, seedling morphology must also be considered. |
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Address |
Inst Natl Rech Agronom, UMR, Ecol Forets Guyane, Kourou, France, Email: baraloto.c@kourou.cirad.fr |
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BOTANICAL SOC AMER INC |
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0002-9122 |
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Notes |
ISI:000249830600001 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
159 |
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Author |
Ruelle, J.; Beauchene, J.; Thibaut, A.; Thibaut, B. |
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Title |
Comparison of physical and mechanical properties of tension and opposite wood from ten tropical rainforest trees from different species |
Type |
Journal Article |
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Year |
2007 |
Publication |
Annals of Forest Science |
Abbreviated Journal |
Ann. For. Sci. |
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Volume |
64 |
Issue |
5 |
Pages |
503-510 |
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Keywords |
tension wood; opposite wood; tropical rainforest; physical and mechanical properties |
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Abstract |
On 10 trees from 10 species of French Guyana tropical rainforest in a clear active process of restoring verticality growth strains were measured in situ in order to determine the occurrence of tension wood within samples. Wood specimens were cut in the vicinity of the growth strains measurements in order to measure some mechanical and physical properties. As suspected, tensile growth strains was very much higher in tension wood zone, because longitudinal modulus of elasticity was slightly higher. Longitudinal shrinkage was also much higher in tension wood than in opposite wood. |
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Address |
UMR EcoFoG, Kourou 97387, Guyana, Email: ruelle@nuagr1.agr.nagoya-u.ac.jp |
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EDP SCIENCES S A |
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1286-4560 |
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Notes |
ISI:000248098600003 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
160 |
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Author |
Nasr, H.; Domenach, A.M.; Ghorbel, M.H.; Benson, D.R. |
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Title |
Divergence in symbiotic interactions between same genotypic PCR-RFLP Frankia strains and different Casuarinaceae species under natural conditions |
Type |
Journal Article |
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Year |
2007 |
Publication |
Physiologia Plantarum |
Abbreviated Journal |
Physiol. Plant. |
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Volume |
130 |
Issue |
3 |
Pages |
400-408 |
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Abstract |
The symbiotic interactions between Frankia strains and their associated plants from the Casuarinaceae under controlled conditions are well documented but little is known about these interactions under natural conditions. We explored the symbiotic interactions between eight genotypically characterized Frankia strains and five Casuarinaceae species in long-term field trials. Characterization of strains was performed using the polymerase chain reaction (PCR) and restriction fragment length polymorphism (RFLP) for the nifD-nifK intergenic transcribed spacer (ITS) and 16S-23S ITS. Assessments of the symbiotic interactions were based on nodulation patterns using nodule dry weight and viability, and on actual N-2 fixation using the delta N-15 method. The PCR-RFLP patterns showed that the analyzed strains belonged to the same genotypic group (CeD group), regardless of the host species and environment of origin. The nodule viability index is introduced as a new tool to measure the viability of perennial nodules and to predict their effectiveness. The host Casuarinaceae species was a key factor influencing both the actual N-2-fixing activity of the associated Frankia strain and the viability of nodules within a location. This is the first study providing information on the symbiotic interactions between genotypically characterized Frankia strains and actinorhizal plants under natural conditions. The results revealed a way to improve a long-term management of the Casuarinaceae symbiosis. |
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Univ Connecticut, Dept Mol & Cell Biol, Storrs, CT 06279 USA, Email: david.benson@uconn.edu |
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BLACKWELL PUBLISHING |
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ISSN |
0031-9317 |
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Notes |
ISI:000247206100010 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
161 |
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Author |
Coutand, C.; Fournier, M.; Moulia, B. |
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Title |
The gravitropic response of poplar trunks: Key roles of prestressed wood regulation and the relative kinetics of cambial growth versus wood maturation |
Type |
Journal Article |
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Year |
2007 |
Publication |
Plant Physiology |
Abbreviated Journal |
Plant Physiol. |
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Volume |
144 |
Issue |
2 |
Pages |
1166-1180 |
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Abstract |
In tree trunks, the motor of gravitropism involves radial growth and differentiation of reaction wood (Archer, 1986). The first aim of this study was to quantify the kinematics of gravitropic response in young poplar (Populus nigra x Populus deltoides, 'I4551') by measuring the kinematics of curvature fields along trunks. Three phases were identified, including latency, upward curving, and an anticipative autotropic decurving, which has been overlooked in research on trees. The biological and mechanical bases of these processes were investigated by assessing the biomechanical model of Fournier et al. (1994). Its application at two different time spans of integration made it possible to test hypotheses on maturation, separating the effects of radial growth and cross section size from those of wood prestressing. A significant correlation between trunk curvature and Fournier's model integrated over the growing season was found, but only explained 32% of the total variance. Moreover, over a week's time period, the model failed due to a clear out phasing of the kinetics of radial growth and curvature that the model does not take into account. This demonstrates a key role of the relative kinetics of radial growth and the maturation process during gravitropism. Moreover, the degree of maturation strains appears to differ in the tension woods produced during the upward curving and decurving phases. Cell wall maturation seems to be regulated to achieve control over the degree of prestressing of tension wood, providing effective control of trunk shape. |
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Address |
Univ Clermont Ferrand, Inst Natl Recherche Agronom, Physiol Integree Arbre Fruitier, Unite Mixte Recherche 547, F-63100 Clermont Ferrand, France, Email: coutand@clermont.inra.fr |
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AMER SOC PLANT BIOLOGISTS |
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ISSN |
0032-0889 |
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Notes |
ISI:000247075000055 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
162 |
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Author |
Ruelle, J.; Yoshida, M.; Clair, B.; Thibaut, B. |
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Title |
Peculiar tension wood structure in Laetia procera (Poepp.) Eichl. (Flacourtiaceae) |
Type |
Journal Article |
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Year |
2007 |
Publication |
Trees-Structure and Function |
Abbreviated Journal |
Trees-Struct. Funct. |
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Volume |
21 |
Issue |
3 |
Pages |
345-355 |
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Keywords |
tension wood; tropical rainforest species; UV microspectrophotometry; scanning electron microscopy; cellulose microfibril angle |
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Abstract |
Tension wood of Laetia procera (Poepp.) Eichl. (Flacourtiaceae), a neo-tropical forest species, shows a peculiar secondary wall structure, with an alternance of thick and thin layers, while opposite wood of this species has a typical secondary wall structure (S1 + S2 + S3). Samples for the study of microstructural properties were collected upon the estimation of growth stresses in the living tree, in order to analyze the correlation of the former with the latter. Investigation using optical microscopy, scanning electron microscopy and UV microspectrophotometry allowed the description of the anatomy, ultra-structure and chemistry of this peculiar polylaminate secondary wall. In the thick layers, cellulose microfibril angle is very low (i.e., microfibril orientation is close to fibre axis) and cellulose microfibrils are well organized and parallel to each other. In the thin layers, microfibrils (only observable in the inner layer) are less organized and are oriented with a large angle relative to the axis of the cell. Thick layers are lightly lignified although thin layers show a higher content of lignin, close to that of opposite wood secondary wall. The more the wood was under tensile stress, the less the secondary wall was lignified, and lower the syringyl on guaiacyl lignin units' ratio was. The innermost layer of the secondary wall looks like a typical S3 layer with large microfibril angle and lignin occurrence. The interest of this kind of structure for the understanding of stress generation is discussed. |
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Address |
UMR EcoFoG, Kourou 97387, French Guiana, Email: ruelle_j@kourou.cirad.fr |
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SPRINGER |
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ISSN |
0931-1890 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
ISI:000246206200009 |
Approved |
no |
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| |
Call Number |
EcoFoG @ eric.marcon @ |
Serial |
163 |
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| Permanent link to this record |
