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Marcon, E.; Scotti, I.; Herault, B.; Rossi, V.; Lang, G. |
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Title |
Generalization of the partitioning of Shannon diversity |
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Journal Article |
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Year |
2014 |
Publication |
PLoS ONE |
Abbreviated Journal |
PLoS ONE |
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Volume |
9 |
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3 |
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e90289 |
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Traditional measures of diversity, namely the number of species as well as Simpson's and Shannon's indices, are particular cases of Tsallis entropy. Entropy decomposition, i.e. decomposing gamma entropy into alpha and beta components, has been previously derived in the literature. We propose a generalization of the additive decomposition of Shannon entropy applied to Tsallis entropy. We obtain a self-contained definition of beta entropy as the information gain brought by the knowledge of each community composition. We propose a correction of the estimation bias allowing to estimate alpha, beta and gamma entropy from the data and eventually convert them into true diversity. We advocate additive decomposition in complement of multiplicative partitioning to allow robust estimation of biodiversity. © 2014 Marcon et al. |
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INRA, UMR 518 Math. Info. Appli, Paris, France |
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Public Library of Science |
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19326203 (Issn) |
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Export Date: 18 April 2014; Source: Scopus; Art. No.: e90289; Coden: Polnc; Language of Original Document: English |
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EcoFoG @ webmaster @ |
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538 |
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Dejean, A.; Labrière, N.; Touchard, A.; Petitclerc, F.; Roux, O. |
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Title |
Nesting habits shape feeding preferences and predatory behavior in an ant genus |
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Journal Article |
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Year |
2014 |
Publication |
Naturwissenschaften |
Abbreviated Journal |
Naturwissenschaften |
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Volume |
101 |
Issue |
4 |
Pages |
323-330 |
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Ant genus Pseudomyrmex; Arboreal and ground nesting; Feeding preferences; Myrmecophytism; Predation |
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We tested if nesting habits influence ant feeding preferences and predatory behavior in the monophyletic genus Pseudomyrmex (Pseudomyrmecinae) which comprises terrestrial and arboreal species, and, among the latter, plant-ants which are obligate inhabitants of myrmecophytes (i.e., plants sheltering so-called plant-ants in hollow structures). A cafeteria experiment revealed that the diet of ground-nesting Pseudomyrmex consists mostly of prey and that of arboreal species consists mostly of sugary substances, whereas the plant-ants discarded all the food we provided. Workers forage solitarily, detecting prey from a distance thanks to their hypertrophied eyes. Approach is followed by antennal contact, seizure, and the manipulation of the prey to sting it under its thorax (next to the ventral nerve cord). Arboreal species were not more efficient at capturing prey than were ground-nesting species. A large worker size favors prey capture. Workers from ground- and arboreal-nesting species show several uncommon behavioral traits, each known in different ant genera from different subfamilies: leaping abilities, the use of surface tension strengths to transport liquids, short-range recruitment followed by conflicts between nestmates, the consumption of the prey's hemolymph, and the retrieval of entire prey or pieces of prey after having cut it up. Yet, we never noted group ambushing. We also confirmed that Pseudomyrmex plant-ants live in a kind of food autarky as they feed only on rewards produced by their host myrmecophyte, or on honeydew produced by the hemipterans they attend and possibly on the fungi they cultivate. © 2014 Springer-Verlag Berlin Heidelberg. |
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IRD, MIVEGEC (IRD 224-CNRS 5290-UM1-UM2), Équipe BEES, 911 avenue Agropolis, 34394 Montpellier Cedex 5, France |
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Springer Verlag |
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00281042 (Issn) |
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Export Date: 5 May 2014; Source: Scopus; Coden: Natwa; Language of Original Document: English; Correspondence Address: Dejean, A.; CNRS, Écologie des Forêts de Guyane (UMR-CNRS 8172), Campus Agronomique, BP 316, 97379 Kourou cedex, France; email: alain.dejean@wanadoo.fr |
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EcoFoG @ webmaster @ |
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539 |
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Zaremski, A.; Gastonguay, L.; Zaremski, C.; Chaffanel, F.; Le Floch, G.; Beauchene, J. |
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Title |
Capacity of tropical forest soils of french guiana and réunion for depolluting the woods impregnated with biocides |
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Journal Article |
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Year |
2013 |
Publication |
Bois et Forets des Tropiques |
Abbreviated Journal |
Bois Forets Tropiques |
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67 |
Issue |
318 |
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51-58 |
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Keywords |
Bioremediation; Copper chromium arsenic(CCA) wood-destroying fungi; Depollution; Loss of mass; Pentachlorophenol(PCP); Treated timber; Tropical soil |
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Wood material for a long time was treated with fungicides or insecticides whose impact on the soil after leaching constitutes a real environmental problem. Nowadays, most of the studies on degradation of these toxic products was carried out with microorganisms which have been isolated in the laboratory. The present study sought to refine the knowledge vis-à-vis these microorganisms, especially wood-destroying fungi degrading pollutants in situ, from which few data are actually available. To decontaminate treated wood, the capacity of wooddestroying microorganisms from tropical forest soils of French Guiana and Reunion was evaluated to degrade toxic biocides. These are pentachlorophenol (PCP) and copper- chromium arsenic based compounds (CCA). Monitoring the degradation of samples of red pine, Pinus resinosa, shows that soils of French Guiana are more efficient than those of Reunion Island in terms of microbial activity vis-àvis these two biocides. A significant difference in loss of mass in specimens of red pine treated with CCA and PCP can range from single to double (respectively 18% and 30%). These findings confirm that CCA is less leacher and less degradable than the PCP by microorganisms in the soil. According to the scale of mass loss in laboratory tests, the wood so treated would be classified very not durable after three years of contact with soil, while the treatment is expected to be very durable. |
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Cirad Umr Ecofog, BP 701, 97387 Kourou cedex, France |
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Lavoisier |
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17775760 (Issn) |
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Export Date: 12 May 2014; Source: Scopus; Language of Original Document: French |
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EcoFoG @ webmaster @ |
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540 |
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Hamadi, A.; Borderies, P.; Albinet, C.; Koleck, T.; Villard, L.; Ho Tong Minh, D.; Le Toan, T.; Burban, B. |
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Title |
Temporal coherence of tropical forests at P-band: Dry and rainy seasons |
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Journal Article |
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Year |
2015 |
Publication |
IEEE Geoscience and Remote Sensing Letters |
Abbreviated Journal |
IEEE Geosci. Remote Sens. Lett. |
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12 |
Issue |
3 |
Pages |
557-561 |
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Keywords |
Biomass mission; forest scattering; ground-based experiment; P-band; range impulse response; temporal coherence |
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In this letter, the temporal coherence of tropical forest scattering at P-band is addressed by means of a ground-based experiment. The study is based on the TropiScat campaign in French Guiana, designed to support the Biomass mission, which will be the ESA 7th Earth Explorer mission. For Biomass, temporal coherence is a crucial parameter for coherent processing of polarimetric synthetic aperture radar (SAR) interferometry and SAR tomography in repeat-pass acquisitions. During the experiment, data were continuously collected for six months during both the rainy and dry seasons. For the rain-free days in both seasons, the coherence exhibits a daily cycle showing a high decorrelation during daytime, which is likely due to motion in the canopy. Up to a 20-day baseline, the coherence is much higher in the dry season than in the rainy season (> 0.8). From 20 to 40 days, it presents the same order of magnitude in both seasons [0.6, 0.7]. For larger temporal baselines, it becomes lower in the dry season. The results can be used to assess the long-term coherence of repeat-pass observations over a tropical forest. However, an extension of this study to several years and over other forest spots would be necessary to draw more general conclusions. |
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EcoFogKourou, France |
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Institute of Electrical and Electronics Engineers Inc. |
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1545598x (Issn) |
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Export Date: 21 October 2014; Correspondence Address: Hamadi, A.; Centre d'Etudes Spatiales de la BiosphèreFrance; Funding Details: ESA, European Space Agency |
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EcoFoG @ webmaster @ |
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563 |
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Niamké, F.B.; Amusant, N.; Kadio, A.A.; Thevenon, M.-F.; Nourissier, S.; Adima, A.A.; Jay-Allemand, C.; Chaix, G. |
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Title |
Rapid prediction of phenolic compounds as chemical markers for the natural durability of teak (Tectona grandis Linn f.) heartwood by near infrared spectroscopy |
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Journal Article |
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Year |
2014 |
Publication |
Journal of Near Infrared Spectroscopy |
Abbreviated Journal |
J. Near Infrared Spectrosc. |
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Volume |
22 |
Issue |
1 |
Pages |
35-43 |
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Keywords |
Heartwood; Hplc; Natural durability; NIR spectroscopy; Phenolic; Prediction; Quinone; Tectona grandis |
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Near infrared (NIR) spectroscopy provides rapid and non-destructive analysis of wood properties and composition. In this study, we aimed to use NIR measurement for the prediction of teak phenolic compounds, which are chemical markers for natural durability of wood. Twenty-seven teak trees from two geographical zones (Malaysia and Ivory Coast) were used. On ground heartwood samples, the content of total phenolics and individual quinones (tectoquinone, 2-(hydroxymethyl)anthraquinone, 2-anthraquinone carboxylic acid, 1,4-naphthoquinoneand 4c,5c-dihydroxy-epiisocatalponol) were determined using high performance liquid chromatography (HPLC). Partial least squares (PLS) regression with NIR spectra on the same samples and phenolic data was used to build NIR models for phenolic contents. The PLS models for the total predicted phenolics and three quinone contents (tectoquinone, 2-(hydroxymethyl) anthraquinone, and 4¢,5¢-dihydroxy-epiisocatalponol) showed a good ratio of performance to deviation (RPD ≥ 2.5), strong coefficients of determination (r2 ≥ 0.8) and the prediction errors were consistent with the reference method. These results demonstrate that NIR spectroscopy can be reliable for the evaluation of total phenolics and individual quinones in teak heartwood wood meal. NIR spectroscopy is a promising technique for rapidly providing information on the quinone contents in teak wood and indirectly for knowing its natural durability. This finding leads to a precise, non-destructive tool for teak wood quality evaluation. © IM Publications LLP 2014. |
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CIRAD-UMR AGAP, Department of Forest Science, ESALQ / University of São Paulo, Avenue Pàdua Dias 11, CEP 13418-900, Piracicaba-SP, Brazil |
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N I R Publications |
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17516552 (Issn) |
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Export Date: 20 May 2014; Source: Scopus; Language of Original Document: English; Correspondence Address: Niamké, F.B.; LAPISEN, Groupe de Recherche en Chimie des Eaux et des Substances Naturelles, Institut National Polytechnique Houphouët Boigny, BP 1313, Yamoussoukro, Cote d'Ivoire |
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EcoFoG @ webmaster @ |
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542 |
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Wagner, F.; Rossi, V.; Aubry-Kientz, M.; Bonal, D.; Dalitz, H.; Gliniars, R.; Stahl, C.; Trabucco, A.; Herault, B. |
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Title |
Pan-tropical analysis of climate effects on seasonal tree growth |
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Journal Article |
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Year |
2014 |
Publication |
PLoS ONE |
Abbreviated Journal |
PLoS ONE |
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Volume |
9 |
Issue |
3 |
Pages |
e92337 |
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Climate models predict a range of changes in tropical forest regions, including increased average temperatures, decreased total precipitation, reduced soil moisture and alterations in seasonal climate variations. These changes are directly related to the increase in anthropogenic greenhouse gas concentrations, primarily CO2. Assessing seasonal forest growth responses to climate is of utmost importance because woody tissues, produced by photosynthesis from atmospheric CO2, water and light, constitute the main component of carbon sequestration in the forest ecosystem. In this paper, we combine intra-annual tree growth measurements from published tree growth data and the corresponding monthly climate data for 25 pan-tropical forest sites. This meta-analysis is designed to find the shared climate drivers of tree growth and their relative importance across pan-tropical forests in order to improve carbon uptake models in a global change context. Tree growth reveals significant intra-annual seasonality at seasonally dry sites or in wet tropical forests. Of the overall variation in tree growth, 28.7% was explained by the site effect, i.e. the tree growth average per site. The best predictive model included four climate variables: precipitation, solar radiation (estimated with extrasolar radiation reaching the atmosphere), temperature amplitude and relative soil water content. This model explained more than 50% of the tree growth variations across tropical forests. Precipitation and solar radiation are the main seasonal drivers of tree growth, causing 19.8% and 16.3% of the tree growth variations. Both have a significant positive association with tree growth. These findings suggest that forest productivity due to tropical tree growth will be reduced in the future if climate extremes, such as droughts, become more frequent. © 2014 Wagner et al. |
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Division of Forest, Nature, and Landscape, KU Leuven, Leuven, Belgium |
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Public Library of Science |
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19326203 (Issn) |
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Export Date: 30 May 2014; Source: Scopus; Art. No.: e92337; Coden: Polnc; Language of Original Document: English |
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EcoFoG @ webmaster @ |
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543 |
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Chartier, M.; Gibernau, M.; Renner, S.S. |
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The evolution of pollinator-plant interaction types in the araceae |
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Journal Article |
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Year |
2014 |
Publication |
Evolution |
Abbreviated Journal |
Evolution |
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Volume |
68 |
Issue |
5 |
Pages |
1533-1543 |
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Keywords |
Ancestral state reconstruction; Inflorescence traits; Phylogeny; Pollination syndromes; Trap flowers |
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Most plant-pollinator interactions are mutualistic, involving rewards provided by flowers or inflorescences to pollinators. Antagonistic plant-pollinator interactions, in which flowers offer no rewards, are rare and concentrated in a few families including Araceae. In the latter, they involve trapping of pollinators, which are released loaded with pollen but unrewarded. To understand the evolution of such systems, we compiled data on the pollinators and types of interactions, and coded 21 characters, including interaction type, pollinator order, and 19 floral traits. A phylogenetic framework comes from a matrix of plastid and new nuclear DNA sequences for 135 species from 119 genera (5342 nucleotides). The ancestral pollination interaction in Araceae was reconstructed as probably rewarding albeit with low confidence because information is available for only 56 of the 120-130 genera. Bayesian stochastic trait mapping showed that spadix zonation, presence of an appendix, and flower sexuality were correlated with pollination interaction type. In the Araceae, having unisexual flowers appears to have provided the morphological precondition for the evolution of traps. Compared with the frequency of shifts between deceptive and rewarding pollination systems in orchids, our results indicate less lability in the Araceae, probably because of morphologically and sexually more specialized inflorescences. © 2013 The Society for the Study of Evolution. |
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Department of Biology, University of Munich, Munich, 80638, Germany |
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Society for the Study of Evolution |
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15585646 (Issn) |
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Export Date: 30 May 2014; Source: Scopus; Coden: Evola; Language of Original Document: English |
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EcoFoG @ webmaster @ |
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544 |
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Chevalier, M.; Robert, F.; Amusant, N.; Traisnel, M.; Roos, C.; Lebrini, M. |
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Enhanced corrosion resistance of mild steel in 1 M hydrochloric acid solution by alkaloids extract from Aniba rosaeodora plant: Electrochemical, phytochemical and XPS studies |
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Journal Article |
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Year |
2014 |
Publication |
Electrochimica Acta |
Abbreviated Journal |
Electrochim Acta |
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131 |
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96-105 |
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Acidic media; Adsorption-XPS; Aniba rosaeodora extract; Anibine; C38 steel; Corrosion inhibitor |
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The present report continues to focus on the broadening application of plant extracts for metallic corrosion control and reports on the inhibiting effect of the Aniba rosaeodora alkaloidic extract on the corrosion of C38 steel in 1 M hydrochloric acid. Potentiodynamic polarization and electrochemical impedance spectroscopy (EIS) techniques were applied to study the metal corrosion behavior in the absence and presence of inhibitor. Studies on the phytochemical constituents were established to determine the active(s) molecule(s). XPS was also carried out to establish the mechanism of corrosion inhibition of the active molecule of C38 steel in acid solution. The inhibitor extract acted as an efficient corrosion inhibitor in 1 M HCl. The experimental data obtained from EIS method show a frequency distribution and therefore a modelling element with frequency dispersion behaviour, a constant phase element (CPEα, Q) has been used. Graphical methods are illustrated by synthetic data to determine the parameter of CPE (α, Q). Polarization studies showed that the Aniba rosaeodora alkaloidic extract was a mixed-type inhibitor and its inhibition efficiency increased with the inhibitor concentration. Studies on the phytochemical constituents of the total alkaloids extract shows that it contains the anibine as the major alkaloid. The results obtained from the electrochemical study have clearly showed that the inhibition efficiency of the total extract was due to the presence of anibine. The XPS studies showed the formation of inhibitor layer containing the Aniba rosaeodora alkaloidic extract and the anibine molecules. © 2014 Elsevier Ltd. All rights reserved. |
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Unité Matériaux et Transformations CNRS UMR 8207, Université Lille 1, École Nationale Supérieure de Chimie de Lille, Avenue Dimitri Mendeleïev-Bât. C7a BP 90108, 59652 Villeneuve d'Ascq, France |
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Elsevier Ltd |
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00134686 (Issn) |
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Export Date: 10 June 2014; Coden: Elcaa; Correspondence Address: Lebrini, M.; Laboratoire Matériaux et Molécules en Milieux Amazonien, UAG-UMR ECOFOG Campus Troubiran, Route de Baduel, 97337 Cayenne, French Guiana; email: mounim.lebrini@guyane.univ-ag.fr |
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EcoFoG @ webmaster @ |
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545 |
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Henkel, T.W.; Wilson, A.W.; Aime, M.C.; Dierks, J.; Uehling, J.K.; Roy, M.; Schimann, H.; Wartchow, F.; Mueller, G.M. |
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Title |
Cantharellaceae of Guyana II: New species of Craterellus, new South American distribution records for Cantharellus guyanensis and Craterellus excelsus, and a key to the Neotropical taxa |
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Journal Article |
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Year |
2014 |
Publication |
Mycologia |
Abbreviated Journal |
Mycologia |
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Volume |
106 |
Issue |
2 |
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307-324 |
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Cantharellales; Coccoloba; Dicymbe; Ectomycorrhizae; Guiana shield; Tropical fungi |
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Craterellus olivaceoluteus sp. nov. and Craterellus cinereofimbriatus sp. nov. are described as new to science. These fungi were collected from Guyana in association with ectomycorrhizal host trees in the genera Dicymbe (Fabaceae subfam. Caesalpinioideae) and Pakaraimaea (Dipterocarpaceae). Cantharellus guyanensis Mont., originally described from French Guiana, is redescribed from recent collections from Guyana, with additional range extensions for the species provided based on material examined from French Guiana, Venezuela, and north central, northeastern and southern Brazil, circumscribing nearly the entire Guiana Shield region and beyond. A new distribution record from French Guiana is provided for Craterellus excelsus T.W. Henkel & Aime. Macromorphological, micromorphological and habitat data are provided for the new species and C. guyanensis as well as DNA sequence data from the nuclear ribosomal regions of the internal transcribed spacer (ITS) and 28S large subunit (LSU); additional sequence data is provided for C. guyanensis and C. excelsus specimens collected outside Guyana. The relationships of these taxa within the Cantharellaceae were evaluated with phylogenetic analyses of ITS and LSU sequence data. This work brings the total number of Cantharellaceae species known from Guyana to eight. A key to the Cantharellus and Craterellus species known from the lowland Neotropics and extralimital montane Central and South America is provided. © 2014 by The Mycological Society of America. |
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Department of Biological Sciences, Boise State University, Boise, ID, 83725, United States |
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Allen Press Inc. |
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15572536 (Issn) |
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Export Date: 10 June 2014; Coden: Mycoa; Correspondence Address: Henkel, T.W.; Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, United States; email: twh5@humboldt.edu; Funding Details: DEB-0732968, NSF, National Science Foundation |
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EcoFoG @ webmaster @ |
Serial |
546 |
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Author |
Menzel, F.; Orivel, J.; Kaltenpoth, M.; Schmitt, T. |
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Title |
What makes you a potential partner? Insights from convergently evolved ant-ant symbioses |
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Journal Article |
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Year |
2014 |
Publication |
Chemoecology |
Abbreviated Journal |
Chemoecology |
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Volume |
24 |
Issue |
3 |
Pages |
105-119 |
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Keywords |
Aggression; Coevolution; Cuticular hydrocarbons; Formicidae; Interspecific association; Parabiosis; Recognition cues |
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Abstract |
Mutualistic, commensalistic or parasitic interactions are unevenly distributed across the animals and plants: in certain taxa, such interspecific associations evolved more often than in others. Within the ants, associations between species of the genera Camponotus and Crematogaster evolved repeatedly and include trail-sharing associations, where two species share foraging trails, and parabioses, where two species share a nest without aggression. Camponotus and Crematogaster may possess life-history traits that favour the evolution of associations. To identify which traits are affected by the association, we investigated a neotropical parabiosis of Ca. femoratus and Cr. levior and compared it to a paleotropical parabiosis and a trail-sharing association. The two neotropical species showed altered cuticular hydrocarbon profiles compared to non-parabiotic species accompanied by low levels of interspecific aggression. Both species occurred in two chemically distinct types. Camponotus followed artificial trails of Crematogaster pheromones, but not vice versa. The above traits were also found in the paleotropical parabiosis, and the trail-following results match those of the trail-sharing association. In contrast to paleotropical parabioses, however, Camponotus was dominant, had a high foraging activity and often fought against Crematogaster over food resources. We suggest three potential preadaptations for parabiosis. First, Crematogaster uses molecules as trail pheromones, which can be perceived by Camponotus, too. Second, nests of Camponotus are an important benefit to Crematogaster and may create a selection pressure for the latter to tolerate Camponotus. Third, there are parallel, but unusual, shifts in cuticular hydrocarbon profiles between neotropics and paleotropics, and between Camponotus and Crematogaster. © 2014 Springer Basel. |
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Department of Animal Ecology and Tropical Biology Biocentre, University of Würzburg, Am Hubland, 97074 Würzburg, Germany |
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Birkhauser Verlag AG |
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09377409 (Issn) |
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Notes |
Export Date: 10 June 2014; Coden: Chmoe; Correspondence Address: Menzel, F.; Department of Evolutionary Biology, Institute of Zoology, University of Mainz, Johannes-von-Müller-Weg 6, 55099 Mainz, Germany; email: menzelf@uni-mainz.de |
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no |
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EcoFoG @ webmaster @ |
Serial |
547 |
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