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Chaves, C.L.; Degen, B.; Pakull, B.; Mader, M.; Honorio, E.; Ruas, P.; Tysklind, N.; Sebbenn, A.M. |
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Title |
Assessing the Ability of Chloroplast and Nuclear DNA Gene Markers to Verify the Geographic Origin of Jatoba (Hymenaea courbaril L.) Timber |
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Journal Article |
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2018 |
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Journal of Heredity |
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109 |
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5 |
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543-552 |
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forensics; illegal logging; nSSRs; SNPs; timber tracking; tropical trees |
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Deforestation-reinforced by illegal logging-is a serious problem in many tropical regions and causes pervasive environmental and economic damage. Existing laws that intend to reduce illegal logging need efficient, fraud resistant control methods. We developed a genetic reference database for Jatoba (Hymenaea courbaril), an important, high value timber species from the Neotropics. The data set can be used for controls on declarations of wood origin. Samples from 308 Hymenaea trees from 12 locations in Brazil, Bolivia, Peru, and French Guiana have been collected and genotyped on 10 nuclear microsatellites (nSSRs), 13 chloroplast SNPs (cpSNP), and 1 chloroplast indel marker. The chloroplast gene markers have been developed using Illumina DNA sequencing. Bayesian cluster analysis divided the individuals based on the nSSRs into 8 genetic groups. Using self-assignment tests, the power of the genetic reference database to judge on declarations on the location has been tested for 3 different assignment methods. We observed a strong genetic differentiation among locations leading to high and reliable self-assignment rates for the locations between 50% to 100% (average of 88%). Although all 3 assignment methods came up with similar mean self-assignment rates, there were differences for some locations linked to the level of genetic diversity, differentiation, and heterozygosity. Our results show that the nuclear and chloroplast gene markers are effective to be used for a genetic certification system and can provide national and international authorities with a robust tool to confirm legality of timber. © 2018 The American Genetic Association. All rights reserved. |
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Instituto Florestal de São Paulo, São Paulo, SP, Brazil |
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Export Date: 1 September 2018 |
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EcoFoG @ webmaster @ |
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817 |
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Chevalier, M.; Robert, F.; Amusant, N.; Traisnel, M.; Roos, C.; Lebrini, M. |
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Enhanced corrosion resistance of mild steel in 1 M hydrochloric acid solution by alkaloids extract from Aniba rosaeodora plant: Electrochemical, phytochemical and XPS studies |
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Journal Article |
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Year |
2014 |
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Electrochimica Acta |
Abbreviated Journal |
Electrochim Acta |
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131 |
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96-105 |
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Acidic media; Adsorption-XPS; Aniba rosaeodora extract; Anibine; C38 steel; Corrosion inhibitor |
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The present report continues to focus on the broadening application of plant extracts for metallic corrosion control and reports on the inhibiting effect of the Aniba rosaeodora alkaloidic extract on the corrosion of C38 steel in 1 M hydrochloric acid. Potentiodynamic polarization and electrochemical impedance spectroscopy (EIS) techniques were applied to study the metal corrosion behavior in the absence and presence of inhibitor. Studies on the phytochemical constituents were established to determine the active(s) molecule(s). XPS was also carried out to establish the mechanism of corrosion inhibition of the active molecule of C38 steel in acid solution. The inhibitor extract acted as an efficient corrosion inhibitor in 1 M HCl. The experimental data obtained from EIS method show a frequency distribution and therefore a modelling element with frequency dispersion behaviour, a constant phase element (CPEα, Q) has been used. Graphical methods are illustrated by synthetic data to determine the parameter of CPE (α, Q). Polarization studies showed that the Aniba rosaeodora alkaloidic extract was a mixed-type inhibitor and its inhibition efficiency increased with the inhibitor concentration. Studies on the phytochemical constituents of the total alkaloids extract shows that it contains the anibine as the major alkaloid. The results obtained from the electrochemical study have clearly showed that the inhibition efficiency of the total extract was due to the presence of anibine. The XPS studies showed the formation of inhibitor layer containing the Aniba rosaeodora alkaloidic extract and the anibine molecules. © 2014 Elsevier Ltd. All rights reserved. |
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Unité Matériaux et Transformations CNRS UMR 8207, Université Lille 1, École Nationale Supérieure de Chimie de Lille, Avenue Dimitri Mendeleïev-Bât. C7a BP 90108, 59652 Villeneuve d'Ascq, France |
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Elsevier Ltd |
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00134686 (Issn) |
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Export Date: 10 June 2014; Coden: Elcaa; Correspondence Address: Lebrini, M.; Laboratoire Matériaux et Molécules en Milieux Amazonien, UAG-UMR ECOFOG Campus Troubiran, Route de Baduel, 97337 Cayenne, French Guiana; email: mounim.lebrini@guyane.univ-ag.fr |
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EcoFoG @ webmaster @ |
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545 |
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Chevolot, M.; Louisanna, E.; Azri, W.; Leblanc-Fournier, N.; Roeckel-Drevet, P.; Scotti-Saintagne, C.; Scotti, I. |
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Title |
Isolation of primers for candidate genes for mechano-sensing in five Neotropical tree species |
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Journal Article |
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2011 |
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Tree Genetics & Genomes |
Abbreviated Journal |
Tree Genet. Genomes |
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7 |
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3 |
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655-661 |
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Population genomics; Functional gene; Mechanical signals; Fabaceae |
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Mechanical signals have an impact on plant development. Tropical rainforest trees display large variability for life-history traits related to biomechanics and therefore are a unique study system to better understand biomechanical trait variability from an evolutionary perspective. From sequences and gene expression data available in model species, we developed specific primers for six candidate genes for mechano-sensing in five tropical species. Most of the gene sequences were polymorphic in most species. |
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[Chevolot, Malia; Louisanna, Eliane; Scotti-Saintagne, Caroline; Scotti, Ivan] INRA, Unite Mixte Rech Ecol Forets Guyane, Kourou 97310, French Guiana, Email: ivan.scotti@ecofog.gf |
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Springer Heidelberg |
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1614-2942 |
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ISI:000290571900018 |
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EcoFoG @ webmaster @ |
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315 |
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Christensen-Dalsgaard, K.K.; Ennos, A.R.; Fournier, M. |
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Are radial changes in vascular anatomy mechanically induced or an ageing process? Evidence from observations on buttressed tree root systems |
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Journal Article |
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2008 |
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Trees-Structure and Function |
Abbreviated Journal |
Trees-Struct. Funct. |
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22 |
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4 |
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543-550 |
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wood; anatomy; mechanical loading; tree development; vessels |
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To investigate the effect of changes in mechanical loading conditions on radial anatomical patterns, we here compare the trunk with the roots in two locations of three species of buttressed trees. The proximal part of the buttress roots is highly mechanically loaded throughout juvenile growth whereas the distal part of the buttresses is though to be mechanically unimportant at formation but become progressively more mechanically loaded during growth. We measured the frequency and diameter of the vessels and the vessel area fraction, and from this calculated the specific conductivity of tissue samples of the core-, intermediate- and outer wood. As in previous studies there was an increase in vessel size, vessel area fraction and specific conductivity from the pith to the bark in the trunk. In the proximal part of the buttress roots, however, there was no increase in vessel size and conductivity from core wood and out in agreement with the high mechanical loading found here throughout growth. There was instead a decrease in vessel size, vessel area fraction and specific conductivity from core- to outer wood in the distal part of the buttress roots in accordance with the increase in mechanical loading. Hence, it appears that the radial anatomical patterns are not a passive function of cambial ageing but may be modified in response to local mechanical loading. |
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[Christensen-Dalsgaard, Karen K.] Univ Alberta, Edmonton, AB T6G 2E3, Canada, Email: kkchrist@ualberta.ca |
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SPRINGER |
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0931-1890 |
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ISI:000257385200014 |
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EcoFoG @ eric.marcon @ |
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136 |
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Christensen-Dalsgaard, K.K.; Ennos, A.R.; Fournier, M. |
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Changes in hydraulic conductivity, mechanical properties, and density reflecting the fall in strain along the lateral roots of two species of tropical trees |
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Journal Article |
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2007 |
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Journal of Experimental Botany |
Abbreviated Journal |
J. Exp. Bot. |
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58 |
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15-16 |
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4095-4105 |
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Keywords |
Buttress roots; Density; Hydraulic conductivity; Hydraulic-mechanical trade-offs; Modulus of elasticity; Tropical trees; Wood; Elastic moduli; Hydraulic conductivity; Wood; Buttress roots; Hydraulic-mechanical trade-offs; Tropical trees; Forestry; water; article; biomechanics; histology; legume; physiology; plant root; plant stem; tree; wood; Xylopia; Biomechanics; Fabaceae; Plant Roots; Plant Stems; Trees; Water; Wood; Xylopia; Conductivity; Elastic Strength; Forestry; Wood |
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Roots have been described as having larger vessels and so greater hydraulic efficiency than the stem. Differences in the strength and stiffness of the tissue within the root system itself are thought to be an adaptation to the loading conditions experienced by the roots and to be related to differences in density. It is not known how potential mechanical adaptations may affect the hydraulic properties of the roots. The change in strength, stiffness, conductivity, density, sapwood area, and second moment of area distally along the lateral roots of two tropical tree species in which the strain is known to decrease rapidly was studied and the values were compared with those of the trunk. It was found that as the strain fell distally along the roots, so did the strength and stiffness of the tissue, whereas the conductivity increased exponentially. These changes appeared to be related to differences in density. In contrast to the distal-most roots, the tissue of the proximal roots had a lower conductivity and higher strength than that of the trunk. This suggests that mechanical requirements on the structure rather than the water potential gradient from roots to branches are responsible for the general pattern that roots have larger vessels than the stem. In spite of their increased transectional area, the buttressed proximal roots were subjected to higher levels of stress and had a lower total conductivity than the rest of the root system. © 2007 The Author(s). |
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AgroParisTech, LERFOB, Ecole Nationale du Genie Rural, des Eaux et Forêts, 14 Avenue Girardet-CS 4216, 54000 Nancy Cedex, France |
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00220957 (Issn) |
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Cited By (since 1996): 6; Export Date: 22 October 2011; Source: Scopus; Coden: Jeboa; doi: 10.1093/jxb/erm268; PubMed ID: 18039738; Language of Original Document: English; Correspondence Address: Christensen-Dalsgaard, K.K.; University of Manchester, Faculty of Life Sciences, Jackson's Mill, Manchester M60 1QD, United Kingdom; email: karen@cd-mail.dk; Chemicals/CAS: water, 7732-18-5; Water, 7732-18-5 |
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EcoFoG @ webmaster @ |
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353 |
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Christensen-Dalsgaard, K.K.; Ennos, A.R.; Fournier, M. |
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Title |
Interrelations between hydraulic and mechanical stress adaptations in woody plants |
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Journal Article |
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2008 |
Publication |
Plant Signaling and Behavior |
Abbreviated Journal |
Plant. Signal. Behav. |
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3 |
Issue |
7 |
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463-465 |
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Conductivity; Modulus of elasticity; Strain; Tree ecophysiology; Tropical trees; Wood anatomy; Yield stress |
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The fields of plant water relations and plant biomechanics have traditionally been studied separately even though often the same tissues are responsible for water transport and mechanical support. There is now increasing evidence that hydraulic and mechanical adaptations may influence one another. We studied the changes in the hydraulic and mechanical properties of the wood along lateral roots of two species of buttressed trees. In these roots, the mechanical contstraints quantified by strain measurements are known to decrease distally. Further, we investigated the effect of mechanical loading on the vessel anatomy in these and four other species of tropical trees. We found that as the strain decreased, the wood became progressively less stiff and strong but the conductivity increased exponentially. This was reflected in that adaptations towards re-enforcing mechanically loaded areas resulted in xylem with fewer and smaller vessels. In addition a controlled growth experiment on three tree species showed that drought adaptation may results in plants with stronger and stiffer tissue. Our results indicate that hydraulic and mechanical stress adaptations may be interrelated, and so support recent studied suggesting that physiological responses are complex balances rather than pure optimisations. ©2008 Landes Bioscience. |
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University of Alberta, Department of Renewable Resources, 4-44 Earth Science Bldg., Edmonton, AB T6G 2E3, Canada |
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15592316 (Issn) |
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Export Date: 25 January 2012; Source: Scopus; Language of Original Document: English; Correspondence Address: Christensen-Dalsgaard, K. K.; University of Alberta, Department of Renewable Resources, 4-44 Earth Science Bldg., Edmonton, AB T6G 2E3, Canada; email: kkchrist@ualberta.ca |
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EcoFoG @ webmaster @ |
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380 |
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Christensen-Dalsgaard, K.K.; Fournier, M.; Ennos, A.R.; Barfod, A.S. |
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Changes in vessel anatomy in response to mechanical loading in six species of tropical trees |
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Journal Article |
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2007 |
Publication |
New Phytologist |
Abbreviated Journal |
New Phytol. |
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176 |
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3 |
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610-622 |
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hydraulic architecture; hydraulic-mechanical trade-off; mechanical adaptation; rooting morphology; tropical trees; vascular anatomy |
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It is well known that trees adapt their supportive tissues to changes in loading conditions, yet little is known about how the vascular anatomy is modified in this process. We investigated this by comparing more and less mechanically loaded sections in six species of tropical trees with two different rooting morphologies. We measured the strain, vessel size, frequency and area fraction and from this calculated the specific conductivity, then measured the conductivity, modulus of elasticity and yield stress. The smallest vessels and the lowest vessel frequency were found in the parts of the trees subjected to the greatest stresses or strains. The specific conductivity varied up to two orders of magnitude between mechanically loaded and mechanically unimportant parts of the root system. A trade-off between conductivity and stiffness or strength was revealed, which suggests that anatomical alterations occur in response to mechanical strain. By contrast, between-tree comparisons showed that average anatomical features for the whole tree seemed more closely related to their ecological strategy. |
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Univ Manchester, Fac Life Sci, Manchester M60 1QD, Lancs, England, Email: karen@cd-mail.dk |
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BLACKWELL PUBLISHING |
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0028-646X |
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ISI:000250275000013 |
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EcoFoG @ eric.marcon @ |
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156 |
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Ciminera, M.; Auger-Rozenberg, M.-A.; Caron, H.; Herrera, M.; Scotti-Saintagne, C.; Scotti, I.; Tysklind, N.; Roques, A. |
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Genetic Variation and Differentiation of Hylesia metabus (Lepidoptera: Saturniidae): Moths of Public Health Importance in French Guiana and in Venezuela |
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Journal Article |
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2019 |
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Journal of medical entomology |
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J. Med. Entomol. |
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56 |
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1 |
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137-148 |
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Hylesia moths impact human health in South America, inducing epidemic outbreaks of lepidopterism, a puriginous dermatitis caused by the urticating properties of females' abdominal setae. The classification of the Hylesia genus is complex, owing to its high diversity in Amazonia, high intraspecific morphological variance, and lack of interspecific diagnostic traits which may hide cryptic species. Outbreaks of Hylesia metabus have been considered responsible for the intense outbreaks of lepidopterism in Venezuela and French Guiana since the C20, however, little is known about genetic variability throughout the species range, which is instrumental for establishing control strategies on H. metabus. Seven microsatellites and mitochondrial gene markers were analyzed from Hylesia moths collected from two major lepidopterism outbreak South American regions. The mitochondrial gene sequences contained significant genetic variation, revealing a single, widespread, polymorphic species with distinct clusters, possibly corresponding to populations evolving in isolation. The microsatellite markers validated the mitochondrial results, and suggest the presence of three populations: one in Venezuela, and two in French Guiana. All moths sampled during outbreak events in French Guiana were assigned to a single coastal population. The causes and implications of this finding require further research. |
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INRA, Unité de Recherche Ecologie des forêts méditerranéennes, Avignon, UR629, France |
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NLM (Medline) |
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19382928 (Issn) |
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Export Date: 1 February 2019 |
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EcoFoG @ webmaster @ |
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857 |
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Clair, B.; Almeras, T.; Sugiyama, J. |
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Compression stress in opposite wood of angiosperms: observations in chestnut, mani and poplar |
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Journal Article |
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2006 |
Publication |
Annals of Forest Science |
Abbreviated Journal |
Ann. For. Sci. |
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63 |
Issue |
5 |
Pages |
507-510 |
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reaction wood; compression wood; tension wood; opposite wood; plant biomechanics; growth stresses; microfibrils angle |
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In order to face environmental constraints, trees are able to re-orient their axes by controlling the stress level in the newly formed wood layers. Angiosperms and gymnosperms evolved into two distinct mechanisms: the former produce a wood with large tension pre-stress on the upper side of the tilted axis, while the latter produce a wood with large compression pre-stress on the lower side. In both cases, the difference between this stress level and that of the opposite side, in light tension, generates the bending of the axis. However, light values of compression were sometimes measured in the opposite side of angiosperms. By analysing old data on chestnut and mani and new data on poplar, this study shows that these values were not measurement artefacts. This reveals that generating light compression stress in opposite wood contributes to improve the performance of the re-orientation mechanism. |
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Kyoto Univ, Res Inst Sustainable Humanosphere, Lab Biomass Morphogenesis & Informat, Uji, Kyoto 6110011, Japan, Email: clair@lmgc.univ-montp2.fr |
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EDP SCIENCES S A |
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1286-4560 |
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ISI:000240514800008 |
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EcoFoG @ eric.marcon @ |
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223 |
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Clair, B.; Almeras, T.; Yamamoto, H.; Okuyama, T.; Sugiyama, J. |
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Mechanical behavior of cellulose microfibrils in tension wood, in relation with maturation stress generation |
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Journal Article |
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Year |
2006 |
Publication |
Biophysical Journal |
Abbreviated Journal |
Biophys. J. |
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91 |
Issue |
3 |
Pages |
1128-1135 |
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A change in cellulose lattice spacing can be detected during the release of wood maturation stress by synchrotron x-ray diffraction experiment. The lattice strain was found to be the same order of magnitude as the macroscopic strain. The fiber repeat distance, 1.033 nm evaluated for tension wood after the release of maturation stress was equal to the conventional wood values, whereas the value before stress release was larger, corresponding to a fiber repeat of 1.035 nm, nearly equal to that of cotton and ramie. Interestingly, the fiber repeat varied from 1.033 nm for wood to 1.040 nm for algal cellulose, with an increasing order of lateral size of cellulose microfibrils so far reported. These lines of experiments demonstrate that, before the stress release, the cellulose was in a state of tension, which is, to our knowledge, the first experimental evidence supporting the assumption that tension is induced in cellulose microfibrils. |
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Kyoto Univ, Res Inst Sustainable Humanosphere, Uji, Kyoto, Japan, Email: sugiyama@rish.kyoto-u.ac.jp |
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BIOPHYSICAL SOCIETY |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
0006-3495 |
ISBN |
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Medium |
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Expedition |
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Conference |
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Notes |
ISI:000239086800039 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
224 |
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