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Seymour, R.S.; Gibernau, M.; Pirintsos, S.A. | ||||
| Title | Thermogenesis of three species of Arum from Crete | Type | Journal Article | ||
| Year | 2009 | Publication | Plant Cell and Environment | Abbreviated Journal | Plant Cell Environ. |
| Volume | 32 | Issue | 10 | Pages | 1467-1476 |
| Keywords | Araceae; arum lily; inflorescence; pollination; temperature regulation | ||||
| Abstract | Inflorescences of arum lilies have a three-part spadix with a scent-producing, sterile appendix above two bands of fertile male and female florets. The appendix and male florets are thermogenic, but with different temporal patterns. Heat-production was measured in Arum concinnatum, A. creticum and A. idaeum. The male florets of A. concinnatum showed a 3 d continuous episode of thermogenesis with three waves, and the appendix warmed in a single, 6 h episode. Maximum fresh-mass-specific CO2 production rate was 0.17 μmol s(-1) g(-1) to achieve a 10.9 degrees C temperature elevation by the appendix, and 0.92 μmol s(-1) g(-1) to achieve a 4.8 degrees C elevation by male florets. Reversible, physiological temperature regulation was not evident in either tissue. Respiration increased with tissue temperatures with Q(10) values of 1.8-3.9, rather than less than 1.0 as occurs in thermoregulatory flowers. Experimental step changes in temperature of appendix and male floret tissues also failed to show thermoregulatory responses. The patterns of thermogenesis therefore appear to be fixed by the temporal sequence of blooming. Thermogenesis in the alpine species, A. creticum and A. idaeum, was significantly lower than in the lowland A. concinnatum, possibly related to difficulty in raising floral temperature in their cold and windy habitat. | ||||
| Address | [Seymour, Roger S.] Univ Adelaide, Adelaide, SA 5005, Australia, Email: roger.seymour@adelaide.edu.au | ||||
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| Publisher | WILEY-BLACKWELL PUBLISHING, INC | Place of Publication | Editor | ||
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| ISSN | 0140-7791 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | ISI:000269592300016 | Approved | no | ||
| Call Number | EcoFoG @ eric.marcon @ | Serial | 195 | ||
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| Author |
Servigne, P.; Orivel, J.; Azémar, F.; Carpenter, J.; Dejean, A.; Corbara, B. | ||||
| Title | An uneasy alliance: a nesting association between aggressive ants and equally fierce social wasps | Type | Journal Article | ||
| Year | 2020 | Publication | Insect Science | Abbreviated Journal | Insect Science |
| Volume | 27 | Issue | 1 | Pages | 122-132 |
| Keywords | Azteca chartifex ants; interspecific association; mutualism; Polybia rejecta wasps; scent trail erasure | ||||
| Abstract | Although the Neotropical territorially dominant arboreal ant Azteca chartifex Forel is very aggressive towards any intruder, its populous colonies tolerate the close presence of the fierce polistine wasp Polybia rejecta (F.).
In French Guiana, 83.33% of the 48 P. rejecta nests recorded were found side by side with those of A. chartifex. This nesting association results in mutual protection from predators (i.e., the wasps protected from army ants; the ants protected from birds). We conducted field studies, laboratory-based behavioral experiments and chemical analyses to elucidate the mechanisms allowing the persistence of this association. Due to differences in the cuticular profiles of the two species, we eliminated the possibility of chemical mimicry. Also, analyses of the carton nests did not reveal traces of marking on the envelopes. Because ant forager flows were not perturbed by extracts from the wasps' Dufour's and venom glands, we rejected any hypothetical action of repulsive chemicals. Nevertheless, we noted that the wasps 'scraped' the surface of the upper part of their nest envelope using their mandibles, likely removing the ants' scent trails, and an experiment showed that ant foragers were perturbed by the removal of their scent trails. This leads us to use the term 'erasure hypothesis'. Thus, this nesting association persists thanks to a relative tolerance by the ants towards wasp presence and the behavior of the wasps that allows them to 'contain' their associated ants through the elimination of their scent trails, direct attacks, 'wing-buzzing' behavior and ejecting the ants. |
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| Publisher | John Wiley & Sons, Ltd (10.1111) | Place of Publication | Editor | ||
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| Series Volume | Series Issue | Edition | |||
| ISSN | 1672-9609 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | doi: 10.1111/1744-7917.12597 | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 885 | ||
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| Author |
Sellan, G. ; Brearley, FQ. ; Nilus, R. ; Ttin, J. ; Majalap-Lee, N. | ||||
| Title | Differences in soil properties among contrasting soil types in Northern Borneo | Type | Journal Article | ||
| Year | 2021 | Publication | Journal of Tropical Forest Science | Abbreviated Journal | |
| Volume | 33 | Issue | 2 | Pages | 191-202 |
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| Abstract | Soil in the tropics is high in diversity, and despite the diversity of Borneo’s forest–soil associations, there is a paucity of data on its soil properties. We investigated the differences between three soil types in the Kabili–Sepilok Forest Reserve, Sabah, Malaysia, encompassing the contrasting alluvial, sandstone and heath forest typologies. We examined the distribution of nutrients between soil types and through soil depths, and assessed the extent of spatial autocorrelation in the three soil types. We confirmed the fertility gradient from alluvial to heath forest soil found by others. Soil elemental concentrations declined in deeper horizons with the exception of exchangeable sodium and aluminium that remained constant through alluvial and sandstone soil profiles. Spatial autocorrelation was present in all three soil types and strongest in the sandstone soil. Overall, we show how bedrock, erosion, leaching and topography influence soil properties across this mosaic of soil types and note their importance in influencing tree communities and their ecological functioning. | ||||
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| Publisher | FOREST RESEARCH INST MALAYSIA | Place of Publication | Editor | ||
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| Series Volume | Series Issue | Edition | |||
| ISSN | 0128-1283 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 1017 | ||
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| Author |
Seipke, R.F.; Barke, J.; Ruiz-Gonzalez, M.X.; Orivel, J.; Yu, D.W.; Hutchings, M.I. | ||||
| Title | Fungus-growing Allomerus ants are associated with antibiotic-producing actinobacteria | Type | Journal Article | ||
| Year | 2012 | Publication | Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology | Abbreviated Journal | Antonie Van Leeuwenhoek Int. J. Gen. Mol. Microbiol. |
| Volume | 101 | Issue | 2 | Pages | 443-447 |
| Keywords | Allomerus ants; Amycolatopsis; Ant-bacteria symbioses; Fungus-growing ants; Insect fungiculture; Streptomyces | ||||
| Abstract | Fungus-growing attine ants use natural-product antibiotics produced by mutualist actinobacteria as 'weedkillers' in their fungal gardens. Here we report for the first time that fungus-growing Allomerus ants, which lie outside the tribe Attini, are associated with antifungal-producing actinobacteria, which offer them protection against non-cultivar fungi isolated from their ant-plants. © 2011 Springer Science+Business Media B.V. | ||||
| Address | State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China | ||||
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| ISSN | 00036072 (Issn) | ISBN | Medium | ||
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| Notes | Export Date: 21 March 2012; Source: Scopus; Coden: Aljma; doi: 10.1007/s10482-011-9621-y; Language of Original Document: English; Correspondence Address: Hutchings, M.I.; School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom; email: m.hutchings@uea.ac.uk | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 385 | ||
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| Author |
Seibold, Sebastien ; Rammer, Werner ; Hothorn, Torsten ; Seidl, Rupert ; Ulyshen, Michael ; Lorz, Janina ; Cadotte, Marc ; Lindenmayer, David ; Adhikari, Yagya ; Aragón, Roxana ; Bae, Soyeon ; Baldrian, Petr ; Barimani Varandi, Hassan ; Barlow, Jos ; Bässler, Clauss ; Beauchêne, Jacques ; and all ................... | ||||
| Title | The contribution of insects to global forest deadwood decomposition | Type | Journal Article | ||
| Year | 2021 | Publication | Nature | Abbreviated Journal | |
| Volume | 597 | Issue | 7874 | Pages | 77-81 |
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| Abstract | The amount of carbon stored in deadwood is equivalent to about 8 per cent of the global forest carbon stocks1. The decomposition of deadwood is largely governed by climate2-5 with decomposer groups-such as microorganisms and insects-contributing to variations in the decomposition rates2,6,7. At the global scale, the contribution of insects to the decomposition of deadwood and carbon release remains poorly understood7. Here we present a field experiment of wood decomposition across 55 forest sites and 6 continents. We find that the deadwood decomposition rates increase with temperature, and the strongest temperature effect is found at high precipitation levels. Precipitation affects the decomposition rates negatively at low temperatures and positively at high temperatures. As a net effect-including the direct consumption by insects and indirect effects through interactions with microorganisms-insects accelerate the decomposition in tropical forests (3.9% median mass loss per year). In temperate and boreal forests, we find weak positive and negative effects with a median mass loss of 0.9 per cent and -0.1 per cent per year, respectively. Furthermore, we apply the experimentally derived decomposition function to a global map of deadwood carbon synthesized from empirical and remote-sensing data, obtaining an estimate of 10.9 ± 3.2 petagram of carbon per year released from deadwood globally, with 93 per cent originating from tropical forests. Globally, the net effect of insects may account for 29 per cent of the carbon flux from deadwood, which suggests a functional importance of insects in the decomposition of deadwood and the carbon cycle. | ||||
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| Publisher | NATURE PUBLISHING GROUP | Place of Publication | Editor | ||
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| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 1046 | ||
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| Author |
Sebbenn, A.M.; Blanc-Jolivet, C.; Mader, M.; Meyer-Sand, B.R.V.; Paredes-Villanueva, K.; Honorio Coronado, E.N.; García-Dávila, C.; Tysklind, N.; Troispoux, V.; Delcamp, A.; Degen, B. | ||||
| Title | Nuclear and plastidial SNP and INDEL markers for genetic tracking studies of Jacaranda copaia | Type | Journal Article | ||
| Year | 2019 | Publication | Conservation Genetics Resources | Abbreviated Journal | Conserv. Gen. Res. |
| Volume | 11 | Issue | 3 | Pages | 341-343 |
| Keywords | DNA fingerprints; Geographical origin; Jacaranda copaia; MassARRAY; MiSeq; RADSeq; Tropical timber | ||||
| Abstract | Nuclear and plastidial single nucleotide polymorphism (SNP) and INDEL markers were developed using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing for population genetics and timber tracking purposes in the Neotropical timber species Jacaranda copaia. We used 407 nuclear SNPs, 29 chloroplast, and 31 mitochondrial loci to genotype 92 individuals from Brazil, Bolivia, French Guiana, and Peru. Based on high amplification rates and genetic differentiation among populations, 113 nuclear SNPs, 11 chloroplast, and 4 mitochondrial loci were selected, and their use validated for genetic tracking of timber origin. | ||||
| Address | BIOGECO, INRA, Univ. Bordeaux, Cestas, 33610, France | ||||
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| Publisher | Springer Netherlands | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
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| ISSN | 18777252 (Issn) | ISBN | Medium | ||
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| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 907 | ||
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| Author |
Scotti-Saintagne, C.; Mariette, S.; Porth, I.; Goicoechea, P.G.; Barreneche, T.; Bodenes, K.; Burg, K.; Kremer, A. | ||||
| Title | Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. and Q petraea (Matt.) Liebl.] | Type | Journal Article | ||
| Year | 2004 | Publication | Genetics | Abbreviated Journal | Genetics |
| Volume | 168 | Issue | 3 | Pages | 1615-1626 |
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| Abstract | Interspecific differentiation values (G(ST)) between two closely related oak species (Quercus petraea and Q. robur) were compiled across different studies with the aim to explore the distribution of differentiation at the genome level. The study was based on a total set of 389 markers (isozymes, AFLPs, SCARs, microsatellites, and SNPs) for which allelic frequencies were estimated in pairs of populations sampled throughout the sympatric distribution of the two species. The overall distribution of GST values followed an L-shaped curve with most markers exhibiting low species differentiation (G(ST) < 0.01) and only a few loci reaching >10% levels. Twelve percent of the loci exhibited significant G(ST) deviations to neutral expectations, suggesting that selection contributed to species divergence. Coding regions expressed higher differentiation than noncoding regions. Among the 389 markers, 158 could be mapped on the 12 linkage groups of the existing Q. robur genetic map. Outlier loci with large G, values were distributed over 9 linkage groups. One cluster of three outlier loci was found within 0.51 cM; but significant autocorrelation of GST was observed at distances <2 cM. The size and distribution of genomic regions involved in species divergence are discussed in reference to hitchhiking effects and disruptive selection. | ||||
| Address | INRA, UMR Biodivers Genes & Ecosyst, F-33612 Cestas, France, Email: kremer@pierronton.inra.fr | ||||
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| Publisher | GENETICS | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
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| ISSN | 0016-6731 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | ISI:000225767400041 | Approved | no | ||
| Call Number | EcoFoG @ eric.marcon @ | Serial | 258 | ||
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| Author |
Scotti-Saintagne, C.; Dick, C.W.; Caron, H.; Vendramin, G.G.; Troispoux, V.; Sire, P.; Casalis, M.; Buonamici, A.; Valencia, R.; Lemes, M.R.; Gribel, R.; Scotti, I. | ||||
| Title | Amazon diversification and cross-Andean dispersal of the widespread Neotropical tree species Jacaranda copaia (Bignoniaceae) | Type | Journal Article | ||
| Year | 2013 | Publication | Journal of Biogeography | Abbreviated Journal | |
| Volume | 40 | Issue | 4 | Pages | 707-719 |
| Keywords | Amazonia; Bignoniaceae; Centre of diversity; Dispersal; Historical biogeography; Neotropics; Phylogeography; Pleistocene; Tropical forest; Vicariance | ||||
| Abstract | Aim: The phylogeographical history of Neotropical species can be difficult to reconstruct because of superimposed Neogene and Quaternary histories, and because of taxonomic uncertainty. We analysed range-wide genetic diversity in a widespread pioneer tree species, Jacaranda copaia (Aubl.) D. Don, to characterize phylogeographical structure, date the evolutionary relationships among lineages, and evaluate the role of dispersal and vicariance in establishing the present geographical range. Location: Guiana Shield; central, southern and western Amazon Basin; Chocó region; Central America. Methods: We analysed nine nuclear simple sequence repeat loci (nuSSR), eight chloroplast SSRs (cpSSR), and two cpDNA intergenic sequences in 341 adult trees. Genetic differentiation at nuSSRs was inferred using Bayesian clustering. Dating of chloroplast lineage divergence was obtained using a range of published mutation rates and Bayesian coalescence analyses. Population divergence dating was performed using an isolation-with-migration model for eight loci (one cp sequence and seven nuSSRs). Results: Nuclear SSR variation identified three geographically overlapping clusters (nu-1, nu-2, nu-3). Twelve cpDNA haplotypes were clustered into two haplogroups (cp-1, cp-2) with the central Amazon harbouring the highest diversity. Molecular dating analysis suggests that cpDNA haplotype diversification started around the end of the Pliocene (2.61 Ma on average), whereas population divergence was more recent and occurred during the mid-Quaternary (point estimates between 357 and 436 ka). Main conclusions: The genetic variation of J. copaia in the Neotropics was shaped mainly by Pleistocene events. Chloroplast diversity did not display the expected cis/trans Andean disjunction, indicating recent dispersal. Nuclear variation revealed that separate regions share a recent history, with a centre of diversity in the central Amazon Basin. The geographical pattern of diversity is congruent with the distribution of the two subspecies, J. copaia copaia and J. copaia spectabilis, and evidence of nuSSR admixture between the two taxa supports their classification as subspecies. © 2012 Blackwell Publishing Ltd. | ||||
| Address | Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Rua Pacheco Leão 915, Jardim Botânico, 22460-030, Rio de Janeiro, RJ, Brazil | ||||
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| Notes | Export Date: 26 March 2013; Source: Scopus | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 476 | ||
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| Author |
Scotti-Saintagne, C.; Dick, C.W.; Caron, H.; Vendramin, G.G.; Guichoux, E.; Buonamici, A.; Duret, C.; Sire, P.; Valencia, R.; Lemes, M.R.; Gribel, R.; Scotti, I. | ||||
| Title | Phylogeography of a species complex of lowland Neotropical rain forest trees (Carapa, Meliaceae) | Type | Journal Article | ||
| Year | 2013 | Publication | Journal of Biogeography | Abbreviated Journal | |
| Volume | 40 | Issue | 4 | Pages | 676-692 |
| Keywords | Amazonia; Carapa; Historical biogeography; Mahogany family; Molecular markers; Neogene diversification; Phylogeography; Quaternary diversification; Species complexes | ||||
| Abstract | Aim Many tropical tree species have poorly delimited taxonomic boundaries and contain undescribed or cryptic species. We examined the genetic structure of a species complex in the tree genus Carapa in the Neotropics in order to evaluate age, geographic patterns of diversity and evolutionary relationships, and to quantify levels of introgression among currently recognized species. Location Lowland moist forests in the Guiana Shield, the Central and Western Amazon Basin, Chocó and Central America. Methods Genetic structure was analysed using seven nuclear simple sequence repeats (nuSSR), five chloroplast SSRs (cpSSR), and two chloroplast DNA (cpDNA) intergenic sequences (trnH-psbA and trnC-ycf6). Bayesian clustering analysis of the SSR data was used to infer population genetic structure and to assign 324 samples to their most likely genetic cluster. Bayesian coalescence analyses were performed on the two cpDNA markers to estimate evolutionary relationships and divergence times. Results Two genetic clusters (nuguianensis and nusurinamensis) were detected, which correspond to the Neotropical species C. guianensis (sensu latu) and C. surinamensis. Fourteen cpDNA haplotypes clustered into six haplogroups distributed between the two nuclear genetic clusters. Divergence between the haplogroups was initiated in the Miocene, with some haplotype structure evolving as recently as the Pleistocene. The absence of complete lineage sorting between the nuclear and chloroplast genomes and the presence of hybrid individuals suggest that interspecific reproductive barriers are incomplete. NuSSR diversity was highest in C. guianensis and, within C. guianensis, cpDNA diversity was highest in the Central and Western Amazon Basin. Regional genetic differentiation was strong but did not conform to an isolation-by-distance process or exhibit a phylogeographical signal. Main conclusions The biogeographical history of Neotropical Carapa appears to have been influenced by events that took place during the Neogene. Our results point to an Amazonian centre of origin and diversification of Neotropical Carapa, with subsequent migration to the Pacific coast of South America and Central America. Gene flow apparently occurs among species, and introgression events are supported by inconsistencies between chloroplast and nuclear lineage sorting. The absence of phylogeographical structure may be a result of the ineffectiveness of geographical barriers among populations and of reproductive isolation mechanisms among incipient and cryptic species in this species complex. © 2012 Blackwell Publishing Ltd. | ||||
| Address | Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Rua Pacheco Leão 915, Jardim Botânico, 22460-030, Rio de Janeiro, RJ, Brazil | ||||
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| Notes | Export Date: 26 March 2013; Source: Scopus | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 477 | ||
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| Author |
Scotti-Saintagne, C.; Bodenes, C.; Barreneche, T.; Pot, D.; Plomion, C.; Kremer, A. | ||||
| Title | Distribution of genomic regions differentiating oak species assessed by QTL detection | Type | Journal Article | ||
| Year | 2004 | Publication | Heredity | Abbreviated Journal | Heredity |
| Volume | 92 | Issue | 1 | Pages | 20-30 |
| Keywords | QTL; leaf morphology; repeatability; genetic map; Q. robur | ||||
| Abstract | Pedunculate oak and sessile oak are two sympatric inter-fertile species that exhibit leaf morphological differences. We aimed to detect quantitative trait loci (QTLs) of these traits in order to locate genomic regions involved in species differentiation. A total of 15 leaf morphological traits were assessed in a mixed forest stand composed of Quercus petraea and Q. robur and in a full-sib pedigree of Q. robur. The progeny of the full-sib family were vegetatively propagated in two successive experiments comprising 174 and 216 sibs, and assessments were made on two leaves collected on each of the 1080 and 1530 cuttings corresponding to the two experiments. Traits that exhibited strong species differences in the mixed stand tended also to have higher repeatability values in the mapping population, thus indicating higher genetic control. A genetic map was constructed for QTL detection. Composite interval mapping with the one QTL model was used for QTL detection. From one to three QTLs were detected for 13 traits. In-depth analysis of the QTLs, controlling the five morphological traits that exhibited the highest interspecific differences in the mixed stand, indicated that they were distributed on six linkage groups, with two clusters comprising QTLs of at least two discriminant traits. These results were reinforced when error 1 for QTL detection was set at 5% at the chromosome level, as up to nine clusters could be identified. In conclusion, traits involved in interspecific differentiation of oaks are under polygenic control and widespread in clusters across the genome. | ||||
| Address | INRA, UMR Biodivers Genes & Ecosyst, F-33612 Cestas, France | ||||
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| Publisher | NATURE PUBLISHING GROUP | Place of Publication | Editor | ||
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| ISSN | 0018-067X | ISBN | Medium | ||
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| Notes | ISI:000187216300005 | Approved | no | ||
| Call Number | EcoFoG @ eric.marcon @ | Serial | 267 | ||
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