| Record |
Author  |
Chaves, C.L.; Blanc-Jolivet, C.; Sebbenn, A.M.; Mader, M.; Meyer-Sand, B.R.V.; Paredes-Villanueva, K.; Honorio Coronado, E.N.; Garcia-Davila, C.; Tysklind, N.; Troispoux, V.; Massot, M.; Degen, B. |
| Title |
Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees |
Type |
Journal Article |
| Year |
2019 |
Publication |
Conservation Genetics Resources |
Abbreviated Journal |
Conserv. Gen. Res. |
| Volume |
11 |
Issue |
3 |
Pages |
329-331 |
| Keywords |
DNA fingerprints; Geographical origin; MiSeq; RADSeq |
| Abstract |
We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed. © 2018, Springer Nature B.V. |
| Address |
Departamento de Fitotecnia, Faculdade de Engenharia de Ilha Solteira, Universidade Estadual Paulista, Ilha Solteira, SP, Brazil |
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| Publisher |
Springer Netherlands |
Place of Publication |
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| ISSN |
18777252 (Issn) |
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| Call Number |
EcoFoG @ webmaster @ |
Serial |
908 |
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