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| Author |
Touchard, A.; Koh, J.M.S.; Aili, S.R.; Dejean, A.; Nicholson, G.M.; Orivel, J.; Escoubas, P. |
| Title |
The complexity and structural diversity of ant venom peptidomes is revealed by mass spectrometry profiling |
Type |
Journal Article |
| Year |
2015 |
Publication |
Rapid Communications in Mass Spectrometry |
Abbreviated Journal |
Rapid Communications in Mass Spectrometry |
Volume  |
29 |
Issue |
5 |
Pages |
385-396 |
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| Abstract |
Rationale Compared with other animal venoms, ant venoms remain little explored. Ants have evolved complex venoms to rapidly immobilize arthropod prey and to protect their colonies from predators and pathogens. Many ants have retained peptide-rich venoms that are similar to those of other arthropod groups. Methods With the goal of conducting a broad and comprehensive survey of ant venom peptide diversity, we investigated the peptide composition of venoms from 82 stinging ant species from nine subfamilies using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOFMS). We also conducted an in-depth investigation of eight venoms using reversed-phase high-performance liquid chromatography (RP-HPLC) separation coupled with offline MALDI-TOFMS. Results Our results reveal that the peptide compositions of ant venom peptidomes from both poneroid and formicoid ant clades comprise hundreds of small peptides (<4 kDa), while large peptides (>4 kDa) are also present in the venom of formicoids. Chemical reduction revealed the presence of disulfide-linked peptides in most ant subfamilies, including peptides structured by one, two or three disulfide bonds as well as dimeric peptides reticulated by three disulfide bonds. Conclusions The biochemical complexity of ant venoms, associated with an enormous ecological and taxonomic diversity, suggests that stinging ant venoms constitute a promising source of bioactive molecules that could be exploited in the search for novel drug and biopesticide leads. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd. |
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VenomeTech, 473 Route des DolinesValbonne, France |
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Export Date: 24 April 2015 |
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EcoFoG @ webmaster @ |
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599 |
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Morel, H.; Mangenet, T.; Beauchene, J.; Ruelle, J.; Nicolini, E.; Heuret, P.; Thibaut, B. |
| Title |
Seasonal variations in phenological traits: leaf shedding and cambial activity in Parkia nitida Miq. and Parkia velutina Benoist (Fabaceae) in tropical rainforest |
Type |
Journal Article |
| Year |
2015 |
Publication |
Trees – Structure and Function |
Abbreviated Journal |
Trees – Structure and Function |
| Volume |
29 |
Issue |
4 |
Pages |
973-984 |
| Keywords |
Cambial activity; Climate; French Guiana; Leaf shedding pattern; Tropical rainforest |
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Key message: In French Guiana, the leaf and cambium phenologies should not be considered only as exogenous-driven processes, as the dry season, but also as endogenous-driven, as tree development stage. Abstract: Studies of the periodicity of wood formation provide essential data on tree age and on factors that control tree growth. The aim of this work was to investigate cambial phenology and its relation with leaf phenology and climatic seasonality in two briefly deciduous tropical rainforest species belonging to the genus Parkia. Wood microcores were collected every 15 days from April 2009 to February 2012 from five trees of each species. The microcores were stained with cresyl violet acetate to facilitate counting the number of cells in the cambial zone, in the radial enlargement zone and wall-thickening zone. At the same time, we observed leaf shedding pattern in the crown of the same trees. In both species, cambial activity was significantly reduced during the leafless period. In P. nitida, these two concomitant events were observed during the dry season whereas in P. velutina they can occur anytime in the year with no apparent link with seasonality. In conclusion, the period of reduced cambial activity in some tropical rainforest trees may be independent of rainfall seasonality and not necessarily follow an annual cycle. It appears that leaf phenology is a good proxy to estimate cambial activity. © 2015, Springer-Verlag Berlin Heidelberg. |
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CNRS, UMR Laboratoire de Mécanique et Génie Civil de Montpellier, Montpellier, France |
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Export Date: 16 July 2015 |
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EcoFoG @ webmaster @ |
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610 |
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Maréchaux, I.; Bartlett, M.K.; Sack, L.; Baraloto, C.; Engel, J.; Joetzjer, E.; Chave, J. |
| Title |
Drought tolerance as predicted by leaf water potential at turgor loss point varies strongly across species within an Amazonian forest |
Type |
Journal Article |
| Year |
2015 |
Publication |
Functional Ecology |
Abbreviated Journal |
Functional Ecology |
| Volume |
29 |
Issue |
10 |
Pages |
1268-1277 |
| Keywords |
Climate change; French Guiana; Functional traits; Plant-water relations; Tropical trees; Wilting |
| Abstract |
Amazonian droughts are predicted to become increasingly frequent and intense, and the vulnerability of Amazonian trees has become increasingly documented. However, little is known about the physiological mechanisms and the diversity of drought tolerance of tropical trees due to the lack of quantitative measurements. Leaf water potential at wilting or turgor loss point (π<inf>tlp</inf>) is a determinant of the tolerance of leaves to drought stress and contributes to plant-level physiological drought tolerance. Recently, it has been demonstrated that leaf osmotic water potential at full hydration (π<inf>o</inf>) is tightly correlated with π<inf>tlp</inf>. Estimating π<inf>tlp</inf> from osmometer measurements of π<inf>o</inf> is much faster than the standard pressure-volume curve approach of π<inf>tlp</inf> determination. We used this technique to estimate π<inf>tlp</inf> for 165 trees of 71 species, at three sites within forests in French Guiana. Our data set represents a significant increase in available data for this trait for tropical tree species. Tropical trees showed a wider range of drought tolerance than previously found in the literature, π<inf>tlp</inf> ranging from -1·4 to -3·2 MPa. This range likely corresponds in part to adaptation and acclimation to occasionally extreme droughts during the dry season. Leaf-level drought tolerance varied across species, in agreement with the available published observations of species variation in drought-induced mortality. On average, species with a more negative π<inf>tlp</inf> (i.e. with greater leaf-level drought tolerance) occurred less frequently across the region than drought-sensitive species. Across individuals, π<inf>tlp</inf> correlated positively but weakly with leaf toughness (R2 = 0·22, P = 0·04) and leaf thickness (R2 = 0·03, P = 0·03). No correlation was detected with other functional traits (leaf mass per area, leaf area, nitrogen or carbon concentrations, carbon isotope ratio, sapwood density or bark thickness). The variability in π<inf>tlp</inf> among species indicates a potential for highly diverse species responses to drought within given forest communities. Given the weak correlations between π<inf>tlp</inf> and traditionally measured plant functional traits, vegetation models seeking to predict forest response to drought should integrate improved quantification of comparative drought tolerance among tree species. © 2015 British Ecological Society. |
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CNRM-GAME – URA1357, 42 avenue G. Coriolis, Toulouse, France |
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Cited By :1; Export Date: 12 October 2015 |
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EcoFoG @ webmaster @ |
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629 |
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Paine, C.E.T.; Baraloto, C.; Díaz, S. |
| Title |
Optimal strategies for sampling functional traits in species-rich forests |
Type |
Journal Article |
| Year |
2015 |
Publication |
Functional Ecology |
Abbreviated Journal |
Functional Ecology |
| Volume |
29 |
Issue |
10 |
Pages |
1325-1331 |
| Keywords |
French Guiana; Functional traits; Plant traits; Sampling design; Specific leaf area; Tropical forest; Wood density |
| Abstract |
Functional traits provide insight into a variety of ecological questions, yet the optimal sampling method to estimate the community-level distribution of plant functional trait values remains a subject of debate, especially in species-rich forests. We present a simulation analysis of the trait distribution of a set of nine completely sampled permanent plots in the lowland rain forests of French Guiana. Increased sampling intensity consistently improved accuracy in estimating community-weighted means and variances of functional trait values, whereas there was substantial variation among functional traits and minor differences among sampling strategies. Thus, investment in intensified sampling yields a greater improvement in the accuracy of estimation than does an equivalent investment in sampling design complication. Notably, 'taxon-free' strategies frequently had greater accuracy than did abundance-based strategies, which had the additional cost of requiring botanical surveys. We conclude that there is no substitute for extensive field sampling to accurately characterize the distribution of functional trait values in species-rich forests. © 2015 British Ecological Society. |
| Address |
Instituto Multidisciplinario de Biología Vegetal (IMBIV-CONICET), Departamento de Diversidad Biológica y Ecología, FCEFyN, Universidad Nacional de Córdoba, CC 495, Córdoba, Argentina |
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Export Date: 12 October 2015 |
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EcoFoG @ webmaster @ |
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630 |
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Malé, P.-J.G.; Leroy, C.; Humblot, P.; Dejean, A.; Quilichini, A.; Orivel, J. |
| Title |
Limited gene dispersal and spatial genetic structure as stabilizing factors in an ant-plant mutualism |
Type |
Journal Article |
| Year |
2016 |
Publication |
Journal of Evolutionary Biology |
Abbreviated Journal |
J. Evol. Biol. |
| Volume |
29 |
Issue |
12 |
Pages |
2519-2529 |
| Keywords |
gene flow; local adaptation; metapopulation; myrmecophyte; population genetics |
| Abstract |
Comparative studies of the population genetics of closely associated species are necessary to properly understand the evolution of these relationships because gene flow between populations affects the partners' evolutionary potential at the local scale. As a consequence (at least for antagonistic interactions), asymmetries in the strength of the genetic structures of the partner populations can result in one partner having a co-evolutionary advantage. Here, we assess the population genetic structure of partners engaged in a species-specific and obligatory mutualism: the Neotropical ant-plant, Hirtella physophora, and its ant associate, Allomerus decemarticulatus. Although the ant cannot complete its life cycle elsewhere than on H. physophora and the plant cannot live for long without the protection provided by A. decemarticulatus, these species also have antagonistic interactions: the ants have been shown to benefit from castrating their host plant and the plant is able to retaliate against too virulent ant colonies. We found similar short dispersal distances for both partners, resulting in the local transmission of the association and, thus, inbred populations in which too virulent castrating ants face the risk of local extinction due to the absence of H. physophora offspring. On the other hand, we show that the plant populations probably experienced greater gene flow than did the ant populations, thus enhancing the evolutionary potential of the plants. We conclude that such levels of spatial structure in the partners' populations can increase the stability of the mutualistic relationship. Indeed, the local transmission of the association enables partial alignments of the partners' interests, and population connectivity allows the plant retaliation mechanisms to be locally adapted to the castration behaviour of their symbionts. |
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1420-9101 |
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EcoFoG @ webmaster @ |
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710 |
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Birer, C.; Moreau, C.S.; Tysklind, N.; Zinger, L.; Duplais, C. |
| Title |
Disentangling the assembly mechanisms of ant cuticular bacterial communities of two Amazonian ant species sharing a common arboreal nest |
Type |
Journal Article |
| Year |
2020 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
| Volume |
29 |
Issue |
7 |
Pages |
1372-1385 |
| Keywords |
ant gardens; bacterial communities; cuticular microbiome; insect cuticle; metabarcoding |
| Abstract |
Bacteria living on the cuticle of ants are generally studied for their protective role against pathogens, especially in the clade of fungus-growing ants. However, little is known regarding the diversity of cuticular bacteria in other ant host species, as well as the mechanisms leading to the composition of these communities. Here, we used 16S rRNA gene amplicon sequencing to study the influence of host species, species interactions and the pool of bacteria from the environment on the assembly of cuticular bacterial communities on two phylogenetically distant Amazonian ant species that frequently nest together inside the roots system of epiphytic plants, Camponotus femoratus and Crematogaster levior. Our results show that (a) the vast majority of the bacterial community on the cuticle is shared with the nest, suggesting that most bacteria on the cuticle are acquired through environmental acquisition, (b) 5.2% and 2.0% of operational taxonomic units (OTUs) are respectively specific to Ca. femoratus and Cr. levior, probably representing their respective core cuticular bacterial community, and (c) 3.6% of OTUs are shared between the two ant species. Additionally, mass spectrometry metabolomics analysis of metabolites on the cuticle of ants, which excludes the detection of cuticular hydrocarbons produced by the host, were conducted to evaluate correlations among bacterial OTUs and m/z ion mass. Although some positive and negative correlations are found, the cuticular chemical composition was weakly species-specific, suggesting that cuticular bacterial communities are prominently environmentally acquired. Overall, our results suggest the environment is the dominant source of bacteria found on the cuticle of ants. © 2020 John Wiley & Sons Ltd |
| Address |
Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, PSL Université Paris, Paris, France |
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Blackwell Publishing Ltd |
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09621083 (Issn) |
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EcoFoG @ webmaster @ |
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975 |
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Marino, N.A.C.; Céréghino, R.; Gilbert, B.; Petermann, J.S.; Srivastava, D.S.; de Omena, P.M.; Bautista, F.O.; Guzman, L.M.; Romero, G.Q.; Trzcinski, M.K.; Barberis, I.M.; Corbara, B.; Debastiani, V.J.; Dézerald, O.; Kratina, P.; Leroy, C.; MacDonald, A.A.M.; Montero, G.; Pillar, V.D.; Richardson, B.A.; Richardson, M.J.; Talaga, S.; Gonçalves, A.Z.; Piccoli, G.C.O.; Jocqué, M.; Farjalla, V.F. |
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Species niches, not traits, determine abundance and occupancy patterns: A multi-site synthesis |
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Journal Article |
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2020 |
Publication |
Global Ecology and Biogeography |
Abbreviated Journal |
Global Ecol. Biogeogr. |
| Volume |
29 |
Issue |
2 |
Pages |
295-308 |
| Keywords |
abundance; environmental niche; functional distinctiveness; functional traits; metacommunity; niche breadth; niche position; occupancy; abundance; biodiversity; functional group; geographical distribution; invertebrate; Neotropical Region; niche breadth; Invertebrata |
| Abstract |
Aim: Locally abundant species are usually widespread, and this pattern has been related to properties of the niches and traits of species. However, such explanations fail to account for the potential of traits to determine species niches and often overlook statistical artefacts. Here, we examine how trait distinctiveness determines the abilities of species to exploit either common habitats (niche position) or a range of habitats (niche breadth) and how niche position and breadth, in turn, affect abundance and occupancy. We also examine how statistical artefacts moderate these relationships. Location: Sixteen sites in the Neotropics. Time period: 1993–2014. Major taxa studied: Aquatic invertebrates from tank bromeliads. Methods: We measured the environmental niche position and breadth of each species and calculated its trait distinctiveness as the average trait difference from all other species at each site. Then, we used a combination of structural equation models and a meta-analytical approach to test trait–niche relationships and a null model to control for statistical artefacts. Results: The trait distinctiveness of each species was unrelated to its niche properties, abundance and occupancy. In contrast, niche position was the main predictor of abundance and occupancy; species that used the most common environmental conditions found across bromeliads were locally abundant and widespread. Contributions of niche breadth to such patterns were attributable to statistical artefacts, indicating that effects of niche breadth might have been overestimated in previous studies. Main conclusions: Our study reveals the generality of niche position in explaining one of the most common ecological patterns. The robustness of this result is underscored by the geographical extent of our study and our control of statistical artefacts. We call for a similar examination across other systems, which is an essential task to understand the drivers of commonness across the tree of life. © 2019 John Wiley & Sons Ltd |
| Address |
Aquatic and Terrestrial Ecology, Royal Belgian Institute of Natural Sciences, Brussels, Belgium |
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Blackwell Publishing Ltd |
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1466822x (Issn) |
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EcoFoG @ webmaster @ |
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991 |
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Almeras, T. |
| Title |
Mechanical analysis of the strains generated by water tension in plant stems. Part II: strains in wood and bark and apparent compliance |
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Journal Article |
| Year |
2008 |
Publication |
Tree Physiology |
Abbreviated Journal |
Tree Physiol. |
| Volume |
28 |
Issue |
10 |
Pages |
1513-1523 |
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biomechanics; calibration; diurnal strains; mechanical model; multilayer cylinder; water potential |
| Abstract |
Tree steins shrink in diameter during the day and swell during the night in response to changes in water tension in the xylem. Stein shrinkage can easily be measured in a nondestructive way, to derive continuous information about tree water status. The relationship between the strain and the change in water tension can be evaluated by empirical calibrations, or can be related to the structure of the plant. A mechanical analysis was performed to make this relationship explicit. The stem is modeled as a cylinder made of multiple layers of tissues, including heartwood, sapwood, and inner and outer bark. The effect of changes in water tension on the apparent strain at the surface of a tissue is quantified as a function of parameters defining stem anatomy and the mechanical properties of the tissues. Various possible applications in the context of tree physiology are suggested. |
| Address |
INRA UMR Ecofog, Kourou 97379, French Guiana, Email: t_almeras@hotmail.com |
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HERON PUBLISHING |
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0829-318X |
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ISI:000260027200009 |
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EcoFoG @ eric.marcon @ |
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129 |
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Rahali, H.; Ghanem, N.; Griffe, L.; Rahali, R.; Stien, D. |
| Title |
A general approach to the quantification of resin-bound functional groups by NMR |
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Journal Article |
| Year |
2004 |
Publication |
New Journal of Chemistry |
Abbreviated Journal |
New J. Chem. |
| Volume |
28 |
Issue |
11 |
Pages |
1344-1346 |
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There has been a continuing need for sensitive, accurate and rapid methods to monitor functional loading of insoluble supports for solid phase synthesis. The present articles reports our findings regarding functional group loading quantification using H-1 NMR. Results obtained for supported amino, hydroxyl and NH-Fmoc groups are in agreement with those calculated using well-established methods and demonstrate that the strategy of looking, either at the excess reagent left in solution (NH2 and OH), or at the protecting group derivatives released from the polymer (Fmoc), is a viable approach to resin loading quanti. cation. |
| Address |
Univ Montpellier 2, CNRS, UMR 5810, Lab Aminoacides Peptides & Prot, F-34095 Montpellier 05, France, Email: didier.stien@guyane.cnrs.fr |
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ROYAL SOC CHEMISTRY |
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1144-0546 |
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ISI:000224894700013 |
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EcoFoG @ eric.marcon @ |
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261 |
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Rey, O.; Loiseau, A.; Facon, B.; Foucaud, J.; Orivel, J.; Cornuet, J.M.; Robert, S.; Dobigny, G.; Delabie, J.H.C.; Mariano, C.D.F.; Estoup, A. |
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Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers |
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Journal Article |
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2011 |
Publication |
Molecular Biology and Evolution |
Abbreviated Journal |
Mol. Biol. Evol. |
| Volume |
28 |
Issue |
9 |
Pages |
2591-2601 |
| Keywords |
parthenogenesis; thelytoky; recombination; inbreeding; biological invasion; Wasmannia auropunctata |
| Abstract |
The little fire ant, Wasmannia auropunctata, displays a peculiar breeding system polymorphism. Classical haplo-diploid sexual reproduction between reproductive individuals occurs in some populations, whereas, in others, queens and males reproduce clonally. Workers are produced sexually and are sterile in both clonal and sexual populations. The evolutionary fate of the clonal lineages depends strongly on the underlying mechanisms allowing reproductive individuals to transmit their genomes to subsequent generations. We used several queen-offspring data sets to estimate the rate of transition from heterozygosity to homozygosity associated with recombination events at 33 microsatellite loci in thelytokous parthenogenetic queen lineages and compared these rates with theoretical expectations under various parthenogenesis mechanisms. We then used sexually produced worker families to define linkage groups for these 33 loci and to compare meiotic recombination rates in sexual and parthenogenetic queens. Our results demonstrate that queens from clonal populations reproduce by automictic parthenogenesis with central fusion. These same parthenogenetic queens produce normally segregating meiotic oocytes for workers, which display much lower rates of recombination (by a factor of 45) than workers produced by sexual queens. These low recombination rates also concern the parthenogenetic production of queen offspring, as indicated by the very low rates of transition from heterozygosity to homozygosity observed (from 0% to 2.8%). We suggest that the combination of automixis with central fusion and a major decrease in recombination rates allows clonal queens to benefit from thelytoky while avoiding the potential inbreeding depression resulting from the loss of heterozygosity during automixis. In sterile workers, the strong decrease of recombination rates may also facilitate the conservation over time of some coadapted allelic interactions within chromosomes that might confer an adaptive advantage in habitats disturbed by human activity, where clonal populations of W. auropunctata are mostly found. |
| Address |
[Rey, O; Loiseau, A; Facon, B; Foucaud, J; Cornuet, JM; Robert, S; Dobigny, G] INRA, UMR Ctr Biol Gest Populat INRA IRD CIRAD Montpe, Montferrier Sur Lez, France, Email: olivier.rey@supagro.inra.fr |
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Oxford Univ Press |
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0737-4038 |
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WOS:000294552700019 |
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EcoFoG @ webmaster @ |
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339 |
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