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Author Levionnois, S.; Coste, S.; Nicolini, E.; Stahl, C.; Morel, H.; Heuret, P. url  doi
openurl 
  Title Scaling of petiole anatomies, mechanics and vasculatures with leaf size in the widespread Neotropical pioneer tree species Cecropia obtusa Trécul (Urticaceae) Type Journal Article
  Year 2020 Publication Tree physiology Abbreviated Journal Tree Physiol.  
  Volume (up) 40 Issue 2 Pages 245-258  
  Keywords allometry; leaf size; petiole anatomy; scaling; theoretical hydraulic conductivity; vessel widening; xylem  
  Abstract Although the leaf economic spectrum has deepened our understanding of leaf trait variability, little is known about how leaf traits scale with leaf area. This uncertainty has resulted in the assumption that leaf traits should vary by keeping the same pace of variation with increases in leaf area across the leaf size range. We evaluated the scaling of morphological, tissue-surface and vascular traits with overall leaf area, and the functional significance of such scaling. We examined 1,271 leaves for morphological traits, and 124 leaves for anatomical and hydraulic traits, from 38 trees of Cecropia obtusa Trécul (Urticaceae) in French Guiana. Cecropia is a Neotropical genus of pioneer trees that can exhibit large laminas (0.4 m2 for C. obtusa), with leaf size ranging by two orders of magnitude. We measured (i) tissue fractions within petioles and their second moment of area, (ii) theoretical xylem hydraulic efficiency of petioles and (iii) the extent of leaf vessel widening within the hydraulic path. We found that different scaling of morphological trait variability allows for optimisation of lamina display among larger leaves, especially the positive allometric relationship between lamina area and petiole cross-sectional area. Increasing the fraction of pith is a key factor that increases the geometrical effect of supportive tissues on mechanical rigidity and thereby increases carbon-use efficiency. We found that increasing xylem hydraulic efficiency with vessel size results in lower leaf lamina area: xylem ratios, which also results in potential carbon savings for large leaves. We found that the vessel widening is consistent with hydraulic optimisation models. Leaf size variability modifies scaling of leaf traits in this large-leaved species. © The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permission@oup.com.  
  Address UMR AMAP, CIRAD, CNRS, IRD, Université de Montpellier, Montpellier, 34398, France  
  Corporate Author Thesis  
  Publisher NLM (Medline) Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 17584469 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 16 March 2020 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 921  
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Author Ntawuhiganayo, E.B.; Uwizeye, F.K.; Zibera, E.; Dusenge, M.E.; Ziegler, C.; Ntirugulirwa, B.; Nsabimana, D.; Wallin, G.; Uddling, J. pdf  url
doi  openurl
  Title Traits controlling shade tolerance in tropical montane trees Type Journal Article
  Year 2020 Publication Tree physiology Abbreviated Journal Tree Physiol.  
  Volume (up) 40 Issue 2 Pages 183-197  
  Keywords biomass allocation; leaf temperature; plant traits; Rwanda; shade intolerance; shade tolerance; tropical montane forest; article; biomass allocation; breathing; canopy; carbon balance; compensation; photosynthesis; plant leaf; plant stem; rain forest; Rwanda; shade tolerance; species difference; sweating  
  Abstract Tropical canopies are complex, with multiple canopy layers and pronounced gap dynamics contributing to their high species diversity and productivity. An important reason for this complexity is the large variation in shade tolerance among different tree species. At present, we lack a clear understanding of which plant traits control this variation, e.g., regarding the relative contributions of whole-plant versus leaf traits or structural versus physiological traits. We investigated a broad range of traits in six tropical montane rainforest tree species with different degrees of shade tolerance, grown under three different radiation regimes (under the open sky or beneath sparse or dense canopies). The two distinct shade-tolerant species had higher fractional biomass in leaves and branches while shade-intolerant species invested more into stems, and these differences were greater under low radiation. Leaf respiration and photosynthetic light compensation point did not vary with species shade tolerance, regardless of radiation regime. Leaf temperatures in open plots were markedly higher in shade-tolerant species due to their low transpiration rates and large leaf sizes. Our results suggest that interspecific variation in shade tolerance of tropical montane trees is controlled by species differences in whole-plant biomass allocation strategy rather than by difference in physiological leaf traits determining leaf carbon balance at low radiation. © The Author(s) 2019. Published by Oxford University Press.  
  Address Rwanda Agriculture and Animal Resources Development, PO Box 5016Kigali, Rwanda  
  Corporate Author Thesis  
  Publisher NLM (Medline) Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 17584469 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 16 March 2020 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 922  
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Author Mahoui,Sihem ; Moulay, Mohamed Said ; Omrane, Abdennebi doi  openurl
  Title Finite element approach to linear parabolic pointwise control problems of incomplete data Type Journal Article
  Year 2020 Publication International Journal of Systems Science Abbreviated Journal  
  Volume (up) 51 Issue 14 Pages 2597-2609  
  Keywords Optimal control problem ; low-regret control ; pointwise control ; finite element method ; a priori error estimates  
  Abstract In this paper we give a priori error estimates for finite element approximations of linear parabolicproblems with pointwise control and incomplete data. We discretise the optimal control problemby using piecewise linear and continuous finite elements for the space discretisation of the state,and we use the backward Euler scheme for time discretisation. We prove a priori error estimates forthe state, the adjoint-state as well as for the low-regret pointwise optimal control.  
  Address  
  Corporate Author Thesis  
  Publisher TAYLOR & FRANCIS LTD Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 935  
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Author Verryckt, L.T.; Ellsworth, D.S.; Vicca, S.; Van Langenhove, L.; Peñuelas, J.; Ciais, P.; Posada, J.M.; Stahl, C.; Coste, S.; Courtois, E.A.; Obersteiner, M.; Chave, J.; Janssens, I.A. doi  openurl
  Title Can light-saturated photosynthesis in lowland tropical forests be estimated by one light level? Type Journal Article
  Year 2020 Publication Biotropica Abbreviated Journal Biotropica  
  Volume (up) 52 Issue 6 Pages 1183-1193  
  Keywords canopy architecture; interspecific variation; light intensity; lowland environment; parameter estimation; photon flux density; photosynthesis; saturation; tropical forest; French Guiana  
  Abstract Leaf-level net photosynthesis (An) estimates and associated photosynthetic parameters are crucial for accurately parameterizing photosynthesis models. For tropical forests, such data are poorly available and collected at variable light conditions. To avoid over- or underestimation of modeled photosynthesis, it is critical to know at which photosynthetic photon flux density (PPFD) photosynthesis becomes light-saturated. We studied the dependence of An on PPFD in two tropical forests in French Guiana. We estimated the light saturation range, including the lowest PPFD level at which Asat (An at light saturation) is reached, as well as the PPFD range at which Asat remained unaltered. The light saturation range was derived from photosynthetic light-response curves, and within-canopy and interspecific differences were studied. We observed wide light saturation ranges of An. Light saturation ranges differed among canopy heights, but a PPFD level of 1,000 µmol m−2 s−1 was common across all heights, except for pioneer trees species that did not reach light saturation below 2,000 µmol m−2 s−1. A light intensity of 1,000 µmol m−2 s−1 sufficed for measuring Asat of climax species at our study sites, independent of the species or the canopy height. Because of the wide light saturation ranges, results from studies measuring Asat at higher PPFD levels (for upper canopy leaves up to 1,600 µmol m−2 s−1) are comparable with studies measuring at 1,000 µmol m−2 s−1. © 2020 The Association for Tropical Biology and Conservation  
  Address UMR 5174, Laboratoire Evolution et Diversité Biologique, CNRS, Université Paul Sabatier, Toulouse, France  
  Corporate Author Thesis  
  Publisher Blackwell Publishing Ltd Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00063606 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 948  
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Author Verryckt, L.T.; Van Langenhove, L.; Ciais, P.; Courtois, E.A.; Vicca, S.; Peñuelas, J.; Stahl, C.; Coste, S.; Ellsworth, D.S.; Posada, J.M.; Obersteiner, M.; Chave, J.; Janssens, I.A. doi  openurl
  Title Coping with branch excision when measuring leaf net photosynthetic rates in a lowland tropical forest Type Journal Article
  Year 2020 Publication Biotropica Abbreviated Journal Biotropica  
  Volume (up) 52 Issue 4 Pages 608-615  
  Keywords branch cutting; canopy physiology; French Guiana; gas exchange; photosynthesis; rainforest; stomatal conductance; ecological modeling; environmental conditions; forest canopy; leaf; measurement method; photosynthesis; tree; tropical forest; Gruidae  
  Abstract Measuring leaf gas exchange from canopy leaves is fundamental for our understanding of photosynthesis and for a realistic representation of carbon uptake in vegetation models. Since canopy leaves are often difficult to reach, especially in tropical forests with emergent trees up to 60 m at remote places, canopy access techniques such as canopy cranes or towers have facilitated photosynthetic measurements. These structures are expensive and therefore not very common. As an alternative, branches are often cut to enable leaf gas exchange measurements. The effect of branch excision on leaf gas exchange rates should be minimized and quantified to evaluate possible bias. We compared light-saturated leaf net photosynthetic rates measured on excised and intact branches. We selected branches positioned at three canopy positions, estimated relative to the top of the canopy: upper sunlit foliage, middle canopy foliage, and lower canopy foliage. We studied the variation of the effects of branch excision and transport among branches at these different heights in the canopy. After excision and transport, light-saturated leaf net photosynthetic rates were close to zero for most leaves due to stomatal closure. However, when the branch had acclimated to its new environmental conditions—which took on average 20 min—light-saturated leaf net photosynthetic rates did not significantly differ between the excised and intact branches. We therefore conclude that branch excision does not affect the measurement of light-saturated leaf net photosynthesis, provided that the branch is recut under water and is allowed sufficient time to acclimate to its new environmental conditions. © 2020 The Association for Tropical Biology and Conservation  
  Address UMR 5174 Laboratoire Evolution et Diversité Biologique, Université Paul Sabatier, CNRS, Toulouse, France  
  Corporate Author Thesis  
  Publisher Blackwell Publishing Ltd Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00063606 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 960  
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Author Schimann, H.; Vleminckx, J.; Baraloto, C.; Engel, J.; Jaouen, G.; Louisanna, E.; Manzi, S.; Sagne, A.; Roy, M. doi  openurl
  Title Tree communities and soil properties influence fungal community assembly in neotropical forests Type Journal Article
  Year 2020 Publication Biotropica Abbreviated Journal Biotropica  
  Volume (up) 52 Issue 3 Pages 444-456  
  Keywords communities; composition; diversity; habitat; lowland neotropical rain forest; macrofungi; soil properties; trees; ectomycorrhiza; fungus; heterogeneity; Neotropical Region; physicochemical property; rainforest; species inventory; species richness; tree; tropical forest; French Guiana; Agaricales; Aphyllophorales; Basidiomycota  
  Abstract The influence exerted by tree communities, topography, and soil chemistry on the assembly of macrofungal communities remains poorly understood, especially in highly diverse tropical forests. Here, we used a large dataset that combines inventories of macrofungal Basidiomycetes fruiting bodies, tree species composition, and measurements for 16 soil physicochemical parameters, collected in 34 plots located in four sites of lowland rain forests in French Guiana. Plots were established on three different topographical conditions: hilltop, slope, and seasonally flooded soils. We found hyperdiverse Basidiomycetes communities, mainly comprising members of Agaricales and Polyporales. Phosphorus, clay contents, and base saturation in soils strongly varied across plots and shaped the richness and composition of tree communities. The latter composition explained 23% of the variation in the composition of macrofungal communities, probably through high heterogeneity of the litter chemistry and selective effects of biotic interactions. The high local heterogeneity of habitats influenced the distribution of both macrofungi and trees, as a result of diversed local soil hydromorphic conditions associated with contrasting soil chemistry. This first regional study across habitats of French Guiana forests revealed new niches for macrofungi, such as ectomycorrhizal ones, and illustrates how macrofungi inventories are still paramount to can be to understand the processes at work in the tropics. Abstract in Spanish is available with online material. © 2020 The Association for Tropical Biology and Conservation  
  Address Laboratoire Évolution et Diversité Biologique, CNRS, UMR 5174 UPS CNRS ENFA IRD, Université Toulouse 3 Paul Sabatier, Toulouse, France  
  Corporate Author Thesis  
  Publisher Blackwell Publishing Ltd Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00063606 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 968  
Permanent link to this record
 

 
Author Shepard, W.D.; Clavier, S.; Cerdan, A. doi  openurl
  Title A generic key to the known larval elmidae (Insecta: Coleoptera) of French Guiana Type Journal Article
  Year 2020 Publication Papeis Avulsos de Zoologia Abbreviated Journal Pap. Avulsos Zool.  
  Volume (up) 60 Issue Special Pages e202060  
  Keywords Biodiversity; Identification; Immatures; Neotropical; Survey  
  Abstract An identification key is provided for 21 larval types of Elmidae (riffle beetles) known to occur in French Guiana. Not all elmid genera known to occur in French Guiana are known in the larval stage. Nor are all the known larval types assigned to known elmid genera. © 2020, Universidade de Sao Paulo. All rights reserved.  
  Address CNRS, UMR EcoFog (AgroParisTech, CIRAD, INRA, Université des Antilles, Université de Guyane), Kourou Cedex, France  
  Corporate Author Thesis  
  Publisher Universidade de Sao Paulo Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00311049 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 980  
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Author Zinger, L.; Donald, J.; Brosse, S.; Gonzalez, M.A.; Iribar, A.; Leroy, C.; Murienne, J.; Orivel, J.; Schimann, H.; Taberlet, P.; Lopes, C.M. doi  openurl
  Title Advances and prospects of environmental DNA in neotropical rainforests Type Journal Article
  Year 2020 Publication Advances in Ecological Research Abbreviated Journal Adv. Ecol. Res.  
  Volume (up) 62 Issue Pages 331-373  
  Keywords Biomonitoring; Conservation biology; DNA metabarcoding; eDNA; Environmental genomics; Neotropics; Rainforests  
  Abstract The rainforests of the Neotropics shelter a vast diversity of plant, animal and microscopic species that provide critical ecosystem goods and services for both local and worldwide populations. These environments face a major crisis due to increased deforestation, pollution, and climate change, emphasizing the need for more effective conservation efforts. The adequate monitoring of these ecosystems has proven a complex and time consuming endeavour, which depends on ever dwindling taxonomic expertise. To date, many species remain undiscovered, let alone described, with otherwise limited information regarding known species population distributions and densities. Overcoming these knowledge shortfalls and practical limitations is becoming increasingly possible through techniques based on environmental DNA (eDNA), i.e., DNA that can be obtained from environmental samples (e.g. tissues, soil, sediment, water, etc.). When coupled with high-throughput sequencing, these techniques now enable realistic, cost-effective, and standardisable biodiversity assessments. This opens up enormous opportunities for advancing our understanding of complex and species-rich tropical communities, but also in facilitating large-scale biomonitoring programs in the neotropics. In this review, we provide a brief introduction to eDNA methods, and an overview of their current and potential uses in both terrestrial and aquatic ecosystems of neotropical rainforests. We also discuss the limits and challenges of these methods for our understanding and monitoring of biodiversity, as well as future research and applied perspectives of these techniques in neotropical rainforests, and beyond. © 2020 Elsevier Ltd  
  Address Departamento de Zoologia, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil  
  Corporate Author Thesis  
  Publisher Academic Press Inc. Place of Publication Editor Dumbrell A.J.; Turner E.C.; Fayle T.M.  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title Advances in Ecological Research  
  Series Volume 62 Series Issue Edition  
  ISSN 00652504 (Issn); 9780128211342 (Isbn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 995  
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Author Sayer, E.J.; Rodtassana, C.; Sheldrake, M.; Bréchet, L.M.; Ashford, O.S.; Lopez-Sangil, L.; Kerdraon-Byrne, D.; Castro, B.; Turner, B.L.; Wright, S.J.; Tanner, E.V.J. doi  openurl
  Title Revisiting nutrient cycling by litterfall—Insights from 15 years of litter manipulation in old-growth lowland tropical forest Type Journal Article
  Year 2020 Publication Advances in Ecological Researc Abbreviated Journal Adv. Ecol. Res.  
  Volume (up) 62 Issue Pages 173-223  
  Keywords Forest floor; Litter addition; Litter removal; Litterfall; Nutrient cycling; Nutrient use efficiency; Soil fertility; Trace elements; Tropical lowland forest  
  Abstract The crucial role of tropical forests in the global carbon balance is underpinned by their extraordinarily high biomass and productivity, even though the majority of tropical forests grow on nutrient-poor soils. Nutrient cycling by litterfall has long been considered essential for maintaining high primary productivity in lowland tropical forests but few studies have tested this assumption experimentally. We review and synthesise findings from the Gigante Litter Manipulation Project (GLiMP), a long-term experiment in lowland tropical forest in Panama, Central America, in which litter has been removed from or added to large-scale plots for 15 years. We assessed changes in soil and litter nutrient concentrations in response to the experimental treatments and estimated nutrient return and nutrient use efficiency to indicate changes in nutrient cycling. The soil concentrations of most nutrients increased with litter addition and declined with litter removal. Litter removal altered nitrogen, potassium, manganese and zinc cycling, demonstrating the importance of litter inputs for maintaining the availability of these elements to plants. By contrast, litter addition only altered nitrogen cycling and, despite low concentrations of available soil phosphorus, the effects of litter manipulation on phosphorus cycling were inconsistent. We discuss potential mechanisms underlying the observed changes, and we emphasise the importance of decomposition processes in the forest floor for retaining nutrient elements, which partially decouples nutrient cycling from the mineral soil. Finally, by synthesising GLiMP studies conducted during 15 years of litter manipulation, we highlight key knowledge gaps and avenues for future research into tropical forest nutrient cycling. © 2020 Elsevier Ltd  
  Address Teagasc, Johnstown Castle, Wexford, Ireland  
  Corporate Author Thesis  
  Publisher Academic Press Inc. Place of Publication Editor Dumbrell A.J.; Turner E.C.; Fayle T.M.  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title Advances in Ecological Research  
  Series Volume 62 Series Issue Edition  
  ISSN 00652504 (Issn); 9780128211342 (Isbn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 1001  
Permanent link to this record
 

 
Author Lang, G.; Marcon, E.; Puech, F. doi  openurl
  Title Distance-based measures of spatial concentration: introducing a relative density function Type Journal Article
  Year 2020 Publication Annals of Regional Science Abbreviated Journal Ann. Reg. Sci.  
  Volume (up) 64 Issue 2 Pages 243-265  
  Keywords Agglomeration; Aggregation; Economic geography; Point patterns; Spatial concentration; accuracy assessment; econometrics; economic activity; economic geography; industrial agglomeration; industrial location; location decision; spatial analysis; spatial distribution  
  Abstract For more than a decade, distance-based methods have been widely employed and constantly improved in spatial economics. These methods are a very useful tool for accurately evaluating the spatial distribution of economic activity. We introduce a new distance-based statistical measure for evaluating the spatial concentration of industries. The m function is the first relative density function to be proposed in economics. This tool supplements the typology of distance-based methods recently drawn up by Marcon and Puech (J Econ Geogr 3(4):409–428, 2003). By considering several simulated and real examples, we show the advantages and the limits of the m function for detecting spatial structures in economics. © 2019, Springer-Verlag GmbH Germany, part of Springer Nature.  
  Address RITM, Univ. Paris-Sud, Université Paris-Saclay and CREST, Sceaux, France  
  Corporate Author Thesis  
  Publisher Springer Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 05701864 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 976  
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