Sist, P., Rutishauser, E., Peña-Claros, M., Shenkin, A., Herault, B., Blanc, L., et al. (2015). The Tropical managed forests Observatory: A research network addressing the future of tropical logged forests. Appl. Veg. Sci., 18(1), 171–174.
Abstract: While attention on logging in the tropics has been increasing, studies on the long-term effects of silviculture on forest dynamics and ecology remain scare and spatially limited. Indeed, most of our knowledge on tropical forests arises from studies carried out in undisturbed tropical forests. This bias is problematic given that logged and disturbed tropical forests are now covering a larger area than the so-called primary forests. A new network of permanent sample plots in logged forests, the Tropical managed Forests Observatory (TmFO), aims to fill this gap by providing unprecedented opportunities to examine long-term data on the resilience of logged tropical forests at regional and global scales. TmFO currently includes 24 experimental sites distributed across three tropical regions, with a total of 490 permanent plots and 921 ha of forest inventories. To improve our knowledge of the resilience of tropical logged forests, 20 research institutes are now collaborating on studies on the effects of logging on forest structure, productivity, biodiversity and carbon fluxes at large spatial and temporal scales. These studies are carried out in the Tropical managed Forests Observatory (TmFO), an international network including 24 sites and 490 permanent sample plots across South America, Africa and South East Asia.
Keywords: Biodiversity; Carbon cycle; Climate change; Ecosystem resilience; Logging; Silviculture; Tropical forests; Tropical managed forests Observatory
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Siefert, A., Violle, C., Chalmandrier, L., Albert, C. H., Taudiere, A., Fajardo, A., et al. (2015). A global meta-analysis of the relative extent of intraspecific trait variation in plant communities. Ecology Letters, 18(12), 1406–1419.
Abstract: Recent studies have shown that accounting for intraspecific trait variation (ITV) may better address major questions in community ecology. However, a general picture of the relative extent of ITV compared to interspecific trait variation in plant communities is still missing. Here, we conducted a meta-analysis of the relative extent of ITV within and among plant communities worldwide, using a data set encompassing 629 communities (plots) and 36 functional traits. Overall, ITV accounted for 25% of the total trait variation within communities and 32% of the total trait variation among communities on average. The relative extent of ITV tended to be greater for whole-plant (e.g. plant height) vs. organ-level traits and for leaf chemical (e.g. leaf N and P concentration) vs. leaf morphological (e.g. leaf area and thickness) traits. The relative amount of ITV decreased with increasing species richness and spatial extent, but did not vary with plant growth form or climate. These results highlight global patterns in the relative importance of ITV in plant communities, providing practical guidelines for when researchers should include ITV in trait-based community and ecosystem studies. © 2015 John Wiley & Sons Ltd/CNRS.
Keywords: Community ecology; Functional diversity; Interspecific variation; Intraspecific variability; Leaf trait; Plant functional trait; Trait-based ecology
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Duplais, C., & Estevez, Y. (2017). Tandem Biocatalysis Unlocks the Challenging de Novo Production of Plant Natural Products. ChemBioChem, 18(22), 2192–2195.
Abstract: Intimate partnership: Knowledge of the biocatalytic cascades in different cellular compartments is limited, but deciphering these systems in nature can be used to inspire synthetic strategies. Two studies report new insights into the biosynthesis of alkaloids and sesterterpenoids in plants. This highlight presents these novel biotransformations to illustrate how tandem biocatalysis can impact the future of natural product production.
Keywords: alkaloids; biosynthesis; enzyme catalysis; protein engineering; terpenes
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Blanc, L., Echard, M., Herault, B., Bonal, D., Marcon, E., Chave, J., et al. (2009). Dynamics of aboveground carbon stocks in a selectively logged tropical forest. Ecol. Appl., 19(6), 1397–1404.
Abstract: The expansion of selective logging in tropical forests may be an important source of global carbon emissions. However, the effects of logging practices on the carbon cycle have never been quantified over long periods of time. We followed the fate of more than 60 000 tropical trees over 23 years to assess changes in aboveground carbon stocks in 48 1.56-ha plots in French Guiana that represent a gradient of timber harvest intensities, with and without intensive timber stand improvement (TSI) treatments to stimulate timber tree growth. Conventional selective logging led to emissions equivalent to more than a third of aboveground carbon stocks in plots without TSI (85 Mg C/ha), while plots with TSI lost more than one-half of aboveground carbon stocks (142 Mg C/ha). Within 20 years of logging, plots without TSI sequestered aboveground carbon equivalent to more than 80% of aboveground carbon lost to logging (-70.7 Mg C/ha), and our simulations predicted an equilibrium aboveground carbon balance within 45 years of logging. In contrast, plots with intensive TSI are predicted to require more than 100 years to sequester aboveground carbon lost to emissions. These results indicate that in some tropical forests aboveground carbon storage can be recovered within half a century after conventional logging at moderate harvest intensities.
Keywords: aboveground biomass; carbon sequestration; deforestation; French Guiana; global change; timber stand improvement; tropical forests
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Koponen, P., Nygren, P., Domenach, A. M., Le Roux, C., Saur, E., & Roggy, J. C. (2003). Nodulation and dinitrogen fixation of legume trees in a tropical freshwater swamp forest in French Guiana. J. Trop. Ecol., 19, 655–666.
Abstract: Nodulated legume trees comprised 43% of the stand basal area in the low, most frequently flooded microsites, and 23% in higher, drier microsites in a tropical freshwater swamp forest in French Guiana. Dinitrogen fixation in Pterocarpus officinalis, Hydrochorea corymbosa and Inga pilosula was confirmed by acetylene reduction assay (ARA), presence of leghaemoglobin in nodules and the N-15 natural abundance method. The results for Zygia cataractae were inconclusive but suggested N-2 fixation in drier microsites. Nodulated Inga disticha had a N-15-to-N-14 ratio similar to non-N-2-fixing trees, but ARA indicated nitrogenase activity and leghaemoglobin was present in nodules. All bacterial strains were identified as Bradyrhizobium spp. according to the partial 16S rDNA sequences, and they were infective in vitro in the model species Macroptilium atropurpuretan. About 35-50% of N in the leaves of P. officinalis, H. corymbosa and I. pilosula was fixed from the atmosphere. Dinitrogen fixation was estimated to contribute at least 8-13% and 1728% to whole-canopy N in high and low microsites, respectively. Symbiotic N, fixation appears to provide both a competitive advantage to legume trees under N-limited, flooded conditions and an important N input to neotropical freshwater swamp forests.
Keywords: acetylene reduction assay; Bradyrhizobium; flooding; microtopography; N-15 natural abundance method; 16S rDNA sequencing
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Blanc, L., & Dick, J. M. (2003). Errors in repeated measurements of soil water content in pots using a ThetaProbe. Soil Use Manage., 19(1), 87–88.
Abstract: The accuracy of a ThetaProbe (Delta-T Devices Ltd, UK) to obtain repeated measures of soil water content in pot plants was tested. This alternative to balance determinations led to a large underestimation of water content, varying from 12.2 to 21.8% of the total water content, depending on soil type.
Keywords: measurement; soil water content; probes
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Almeras, T., Thibaut, A., & Gril, J. (2005). Effect of circumferential heterogeneity of wood maturation strain, modulus of elasticity and radial growth on the regulation of stem orientation in trees. Trees-Struct. Funct., 19(4), 457–467.
Abstract: Active mechanisms of re-orientation are necessary to maintain the verticality of tree stems. They are achieved through the production of reaction wood, associated with circumferential variations of three factors related to cambial activity: maturation strain, longitudinal modulus of elasticity (MOE) and eccentric growth. These factors were measured on 17 mature trees from different botanical families and geographical locations. Various patterns of circumferential variation of these factors were identified. A biomechanical analysis based on beam theory was performed to quantify the individual impact of each factor. The main factor of re-orientation is the circumferential variation of maturation strains. However, this factor alone explains only 57% of the re-orientations. Other factors also have an effect through their interaction with maturation strains. Eccentric growth is generally associated with heterogeneity of maturation strains, and has an important complementary role, by increasing the width of wood with high maturation strain. Without this factor, the efficiency of re-orientations would be reduced by 31% for angiosperms and 26% for gymnosperms. In the case of angiosperms, MOE is often larger in tension wood than in normal wood. Without these variations, the efficiency of re-orientations would be reduced by 13%. In the case of gymnosperm trees, MOE of compression wood is lower than that of normal wood, so that re-orientation efficiency would be increased by 24% without this factor of variations.
Keywords: biomechanics; reaction wood; maturation strain; Young's modulus; eccentricity
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Guerrero, R. J., Delabie, J. H. C., & Dejean, A. (2010). Taxonomic Contribution to the aurita Group of the Ant Genus Azteca (Formicidae: Dolichoderinae). J. Hymenopt. Res., 19(1), 51–65.
Abstract: We describe five new species in the aurita group of the genus Azteca: Azteca andreae sp. n. (French Guiana), Azteca diabolica sp. n. (Panama), Azteca laurae sp. n. (Brazil), Azteca linamariae sp. n. (Brazil and Colombia) and Azteca snellingi sp. n. (Panama). Four of these new species are based on gynes, while the last is based only on the worker caste. All of them bear the aurita group characteristics. The second taxon is remarkable, as it differs from all of the other members of the group in the exaggerated, horn-like extensions of the posterolateral vertex margins. Azteca snellingi sp. n. is named in honor of our colleague, Roy Snelling, in tribute to his life-long contribution to knowledge of the world of Hymenoptera. A key to all known species of the aurita group, based on gynes, is provided. We report also for the first time an intercast case for the genus Azteca, based on an Azteca schimperi specimen.
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Groc, S., Delabie, J. H. C., Fernández, F., Leponce, M., Orivel, J., Silvestre, R., et al. (2013). Leaf-litter ant communities in a pristine Guianese rainforest: stable functional structure versus high species turnover. Myrmecol. News, 19, 43–51.
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Groc, S., Delabie, J. H. C., Fernández, F., Leponce, M., Orivel, J., Silvestre, R., et al. (2014). Leaf-litter ant communities (Hymenoptera: Formicidae) in a pristine Guianese rain-forest: Stable functional structure versus high species turnover. Myrmecological News, 19, 43–51.
Abstract: We compared the ant assemblages from four very heterogeneous habitats over a short-distance elevational gradient of vegetation (due to the presence of an inselberg) at the Nouragues Research Station, French Guiana. We focused on litter-dwelling ants, combining the use of pitfall traps and the Winkler method according to the Ants of the Leaf Litter Proto-col. This permitted us to note (1) a high leaf-litter ant diversity overall and a decreasing diversity gradient from the lowland rainforest to the top of the inselberg, and (2) differences in species density, composition and functional struc-ture. While the ant assemblages on the plateau and inselberg can be considered functionally similar and typical of an Amazonian rainforest, that of the transition forest, relatively homogenous, rather corresponded to an ant fauna typical of open areas. By contrast, the liana forest assemblage was unexpectedly richer and denser than the others, sheltering a litter-dwelling ant fauna dominated by numerous and abundant cryptic species. These taxonomical and functional dissi-milarities may reflect the influence of the environmental heterogeneity, which, through variable abiotic conditions, can contribute to maintaining a notably rich ant biodiversity in these Neotropical habitats.
Keywords: Diversity gradient; Functional groups; Habitat heterogeneity; Litter-dwelling ant communities; Local scale; Pristine Amazonian rainforest; Taxonomic and functional structure
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