|
|
Maggia, M. - E., Decaëns, T., Lapied, E., Dupont, L., Roy, V., Schimann, H., et al. (2021). At each site its diversity: DNA barcoding reveals remarkable earthworm diversity in neotropical rainforests of French Guiana. Applied Soil Ecology, 164, 103932.
Abstract: Despite their recognized essential role in soil, earthworms in tropical environments are still understudied. The aim of this study was to re-evaluate the diversity at the regional scale, as well as to investigate the environmental and spatial drivers of earthworm communities. We sampled earthworm communities across a range of habitats at six localities in French Guiana using three different sampling methods. We generated 1675 DNA barcodes and combined them with data from a previous study. Together, all sequences clustered into 119 MOTUs which were used as proxy to assess species richness. Only two MOTUs were common between the six localities and 20.2% were singletons, showing very high regional species richness and a high number of rare species. A canonical redundancy analysis was used to identify key drivers of the earthworm community composition. The RDA results and beta-diversity calculations both show strong species turnover and a strong spatial effect, resulting from dispersal limitations that are responsible for the current community composition. Sampling in different microhabitats allowed the discovery of 23 MOTUs that are exclusively found in decaying trunks and epiphytes, highlighting hidden diversity of earthworms outside of soil.
Keywords: DNA barcoding Tropical rainforest Community ecology Diversity level Sampling methods
|
|
|
|
Orivel, J., Lambs, L., Male, P. J. G., Leroy, C., Grangier, J., Otto, T., et al. (2011). Dynamics of the association between a long-lived understory myrmecophyte and its specific associated ants. Oecologia, 165(2), 369–376.
Abstract: Myrmecophytic symbioses are widespread in tropical ecosystems and their diversity makes them useful tools for understanding the origin and evolution of mutualisms. Obligate ant-plants, or myrmecophytes, provide a nesting place, and, often, food to a limited number of plant-ant species. In exchange, plant-ants protect their host plants from herbivores, competitors and pathogens, and can provide them with nutrients. Although most studies to date have highlighted a similar global pattern of interactions in these systems, little is known about the temporal structuring and dynamics of most of these associations. In this study we focused on the association between the understory myrmecophyte Hirtella physophora (Chrysobalanaceae) and its obligate ant partner Allomerus decemarticulatus (Myrmicinae). An examination of the life histories and growth rates of both partners demonstrated that this plant species has a much longer lifespan (up to about 350 years) than its associated ant colonies (up to about 21 years). The size of the ant colonies and their reproductive success were strongly limited by the available nesting space provided by the host plants. Moreover, the resident ants positively affected the vegetative growth of their host plant, but had a negative effect on its reproduction by reducing the number of flowers and fruits by more than 50%. Altogether our results are important to understanding the evolutionary dynamics of ant-plant symbioses. The highly specialized interaction between long-lived plants and ants with a shorter lifespan produces an asymmetry in the evolutionary rates of the interaction which, in return, can affect the degree to which the interests of the two partners converge.
Keywords: Allomerus decemarticulatus; Hirtella physophora; Lifespan; Mutualism; Myrmecophyte
|
|
|
|
Sist, P., & Nguyen-The, N. (2002). Logging damage and the subsequent dynamics of a dipterocarp forest in East Kalimantan (1990-1996). For. Ecol. Manage., 165(1-3), 85–103.
Abstract: The effects of logging damage on forest dynamics processes were assessed in a lowland dipterocarp forest of East Kalimantan, Indonesia. From 1990 to 1991, twelve 4 ha plots (200 m x 200 m) each divided into four I ha subplots were set up and all trees with dbh greater than or equal to 10 cm measured and identified at least at the generic level. Logging was carried out from November 1991 to March 1992 in nine plots while three plots served as control. The 48 subplots were grouped according to the proportion Of remaining basal area after harvesting, as follows: group I with more than 80% of the original basal area remaining, group 2 with 70-79%, group 3 with less than 70%, and group 4 as control plots. Remeasurements were carried out just after logging in 1992 and then every 2 years until 1996. Felling intensity varied from I to 17 stems ha(-1) (50-250 m(3) ha(-1)). In primary forest, mean annual mortality remained constant to 1.5% per year throughout the study period while mean annual mortality rate was significantly higher in logged-over forest (2.6% per year). This higher rate resulted from a higher mortality of injured trees (4.9% per year). Four years after logging, mortality rates in logged-over and primary forest were similar. Recruitment remained constant at 8 trees ha(-1) per year in primary forest and varied from 14 to 32 trees ha(-1) per year in logged-over stand in proportion with the amount of damage. In stands with the lowest remaining basal area, the establishment and growth of dipterocarps was strongly limited by the strong regeneration of pioneer species. This study suggests that total basal area removed by logging in primary forest (harvested trees and trees killed during felling and skidding) should not exceed 15% of the original one; reduced-impact logging (RIL) techniques applied with a maximum harvesting intensity of 8 trees ha(-1), can keep logging damage under this threshold. (C) 2002 Elsevier Science B.V. All rights reserved.
|
|
|
|
Houel, E., Fleury, M., Odonne, G., Nardella, F., Bourdy, G., Vonthron-Sénécheau, C., et al. (2015). Antiplasmodial and anti-inflammatory effects of an antimalarial remedy from the Wayana Amerindians, French Guiana: Takamalaimë (Psidium acutangulum Mart. ex DC., Myrtaceae). Journal of Ethnopharmacology, 166, 279–285.
Abstract: Ethnopharmacological relevance:
Field investigations highlighted the use of Psidium acutangulum Mart. ex DC (syn. P. persoonii McVaugh), a small tree used by the Wayana Amerindians in Twenke–Taluhwen and Antecume–Pata, French Guiana, for the treatment of malaria, and administered either orally in the form of a decoction or applied externally over the whole body. This use appears limited to the Wayana cultural group in French Guiana and has never been reported anywhere else. Our goal was to evaluate the antimalarial and anti-inflammatory activities of a P. acutangulum decoction to explain the good reputation of this remedy.
Materials and methods:
Interviews with the Wayana inhabitants of Twenke–Taluhwen and Antecume–Pata were conducted within the TRAMAZ project according to the TRAMIL methodology, which is based on a quantitative and qualitative analysis of medicinal plant uses. A decoction of dried aerial parts of P. acutangulum was prepared in consistency with the Wayana recipe. In vitro antiplasmodial assays were performed on chloroquine-resistant FcB1 ([3H]-hypoxanthine bioassay) and 7G8 (pLDH bioassay) P. falciparum strains and on chloroquine sensitive NF54 ([3H]-hypoxanthine bioassay) P. falciparum strain. In vitro anti-inflammatory activity (IL-1β, IL-6, IL-8, TNFα) was evaluated on LPS-stimulated human PBMC and NO secretion inhibition was measured on LPS stimulated RAW murine macrophages. Cytotoxicity of the decoction was measured on L6 mammalian cells, PBMCs, and RAW cells. A preliminary evaluation of the in vivo antimalarial activity of the decoction, administered orally twice daily, was assessed by the classical four-day suppressive test against P. berghei NK65 in mice.
Results:
The decoction displayed a good antiplasmodial activity in vitro against the three tested strains, regardless to the bioassay used, with IC50 values of 3.3 µg/mL and 10.3 µg/mL against P. falciparum FcB1 and NF54, respectively and 19.0 µg/mL against P. falciparum 7G8. It also exhibited significant anti-inflammatory activity in vitro in a dose dependent manner. At a concentration of 50 µg/mL, the decoction inhibited the secretion of the following pro-inflammatory cytokines: TNFα (−18%), IL-1β (−58%), IL-6 (−32%), IL-8 (−21%). It also exhibited a mild NO secretion inhibition (−13%) at the same concentration. The decoction was non-cytotoxic against L6 cells (IC50>100 µg/mL), RAW cells and PBMC. In vivo, 150 µL of the decoction given orally twice a day (equivalent to 350 mg/kg/day of dried extract) inhibited 39.7% average parasite growth, with more than 50% of inhibition in three mice over five. The absence of response for the two remaining mice, however, induced a strong standard deviation.
Conclusions:
This study highlighted the in vitro antiplasmodial activity of the decoction of P. acutangulum aerial parts, used by Wayana Amerindians from the Upper-Maroni in French Guiana in case of malaria. Its antioxidant and anti-inflammatory potential, which may help to explain its use against this disease, was demonstrated using models of artificially stimulated cells.
Keywords: Psidium acutangulum; Plasmodium; Cytokines; Antimalarial; French Guiana; Traditional medicine
|
|
|
|
Barantal, S., Roy, J., Fromin, N., Schimann, H., & Hattenschwiler, S. (2011). Long-term presence of tree species but not chemical diversity affect litter mixture effects on decomposition in a neotropical rainforest. Oecologia, 167(1), 241–252.
Abstract: Plant litter diversity effects on decomposition rates are frequently reported, but with a strong bias towards temperate ecosystems. Altered decomposition and nutrient recycling with changing litter diversity may be particularly important in tree species-rich tropical rainforests on nutrient-poor soils. Using 28 different mixtures of leaf litter from 16 Amazonian rainforest tree species, we tested the hypothesis that litter mixture effects on decomposition increase with increasing functional litter diversity. Litter mixtures and all single litter species were exposed in the field for 9 months using custom-made microcosms with soil fauna access. In order to test the hypothesis that the long-term presence of tree species contributing to the litter mixtures increases mixture effects on decomposition, microcosms were installed in a plantation at sites including the respective tree species composition and in a nearby natural forest where these tree species are absent. We found that mixture decomposition deviated from predictions based on single species, with predominantly synergistic effects. Functional litter diversity, defined as either richness, evenness, or divergence based on a wide range of chemical traits, did not explain the observed litter mixture effects. However, synergistic effects in litter mixtures increased with the long-term presence of tree species contributing to these mixtures as the home field advantage hypothesis assumes. Our data suggest that complementarity effects on mixed litter decomposition may emerge through long-term interactions between aboveground and belowground biota.
Keywords: Amazonian rainforest; Chemical diversity; Decomposition; Functional diversity indices; Litter traits
|
|
|
|
Scotti-Saintagne, C., Mariette, S., Porth, I., Goicoechea, P. G., Barreneche, T., Bodenes, K., et al. (2004). Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. and Q petraea (Matt.) Liebl.]. Genetics, 168(3), 1615–1626.
Abstract: Interspecific differentiation values (G(ST)) between two closely related oak species (Quercus petraea and Q. robur) were compiled across different studies with the aim to explore the distribution of differentiation at the genome level. The study was based on a total set of 389 markers (isozymes, AFLPs, SCARs, microsatellites, and SNPs) for which allelic frequencies were estimated in pairs of populations sampled throughout the sympatric distribution of the two species. The overall distribution of GST values followed an L-shaped curve with most markers exhibiting low species differentiation (G(ST) < 0.01) and only a few loci reaching >10% levels. Twelve percent of the loci exhibited significant G(ST) deviations to neutral expectations, suggesting that selection contributed to species divergence. Coding regions expressed higher differentiation than noncoding regions. Among the 389 markers, 158 could be mapped on the 12 linkage groups of the existing Q. robur genetic map. Outlier loci with large G, values were distributed over 9 linkage groups. One cluster of three outlier loci was found within 0.51 cM; but significant autocorrelation of GST was observed at distances <2 cM. The size and distribution of genomic regions involved in species divergence are discussed in reference to hitchhiking effects and disruptive selection.
|
|
|
|
Svensk, M., Coste, S., Gérard, B., Gril, E., Julien, F., Maillard, P., et al. (2020). Drought effects on resource partition and conservation among leaf ontogenetic stages in epiphytic tank bromeliads. Physiol. Plant., 170(4), 488–507.
Abstract: Studying the response to drought stress of keystone epiphytes such as tank bromeliads is essential to better understand their resistance capacity to future climate change. The objective was to test whether there is any variation in the carbon, water and nutrient status among different leaf ontogenetic stages in a bromeliad rosette subjected to a gradient of drought stress. We used a semi-controlled experiment consisting in a gradient of water shortage in Aechmea aquilega and Lutheria splendens. For each bromeliad and drought treatment, three leaves were collected based on their position in the rosette and several functional traits related to water and nutrient status, and carbon metabolism were measured. We found that water status traits (relative water content, leaf succulence, osmotic and midday water potentials) and carbon metabolism traits (carbon assimilation, maximum quantum yield of photosystem II, chlorophyll and starch contents) decreased with increasing drought stress, while leaf soluble sugars and carbon, nitrogen and phosphorus contents remained unchanged. The different leaf ontogenetic stages showed only marginal variations when subjected to a gradient of drought. Resources were not reallocated between different leaf ontogenetic stages but we found a reallocation of soluble sugars from leaf starch reserves to the root system. Both species were capable of metabolic and physiological adjustments in response to drought. Overall, this study advances our understanding of the resistance of bromeliads faced with increasing drought stress and paves the way for in-depth reflection on their strategies to cope with water shortage. © 2020 Scandinavian Plant Physiology Society
Keywords: chlorophyll; nitrogen; water; Bromeliaceae; drought; metabolism; photosynthesis; plant leaf; Bromeliaceae; Chlorophyll; Droughts; Nitrogen; Photosynthesis; Plant Leaves; Water
|
|
|
|
Maia, A. C. D., Schlindwein, C., Navarro, D. M. A. F., & Gibernau, M. (2010). Pollination of Philodendron Acutatum (Araceae) in the Atlantic Forest of Northeastern Brazil: A Single Scarab Beetle Species Guarantees High Fruit Set. Int. J. Plant Sci., 171(7), 740–748.
Abstract: Philodendron acutatum (Araceae) is a hemiepiphyte common to the Atlantic Forest of northeastern Brazil. In two localities, we studied the species' breeding system and associations with flower-visiting insects, along with an analysis of its floral scent composition. The fruit set of self-incompatible P. acutatum was high, more than 90%, and inflorescences were exclusively pollinated by one species of scarab beetle, Cyclocephala celata (Scarabaeidae, Dynastinae). Pollinators are drawn toward the inflorescences at dusk by strong floral fragrances given off during the female phase of anthesis, along with endogenous heating of the spadix, whose temperatures were recorded at more than 11 degrees C above ambient air. Two other species of flower-visiting Cyclocephala were also consistently recovered in blacklight trappings during the flowering period of P. acutatum. The fact that only C. celata was found in association with P. acutatum suggests a local reproductive dependence of the plant to this scarab beetle species. Dihydro-beta-ionone and 2-hydroxy-5-methyl-3-hexanone, a rare volatile molecule so far unreported as a floral compound, together accounted for more than 97% of the unique scent composition of P. acutatum and might be involved in specific attraction of C. celata.
Keywords: Cyclocephala; floral volatiles; pollination specificity; reproductive success; thermogenesis
|
|
|
|
Phillips, P. D., de Azevedo, C. P., Degen, B., Thompson, I. S., Silva, J. N. M., & van Gardingen, P. R. (2004). An individual-based spatially explicit simulation model for strategic forest management planning in the eastern Amazon. Ecol. Model., 173(4), 335–354.
Abstract: A model to simulate the ecological processes of tree growth, mortality and recruitment, and the processes of forest management, in the terra firme forests of the eastern Amazon is described. It is implemented within the SYMFOR (http://www.symfor.org) framework. It is based on measurements of all trees that have a diameter greater than 5 cm from experimental plots in the Jari Cellulose and Tapajos National Forest areas over a 16-year period. Ten species groups are used to describe the natural processes affecting tree behaviour. Growth rates are calculated for each species group using the tree diameter and a competition index. Mortality and recruitment are simulated as stochastic processes. Recruitment probability is based on the predicted growth rate of a hypothetical tree. Options exist to vary the human interaction with the forest reflecting forest management decisions, as for other SYMFOR models. Model evaluation compares the performance of the model with data describing forest recovery for 16 years following logging. The model was applied to simulate current forest management practice in the Brazilian Amazon, with 40 m(3) ha(-1) of timber extracted with a cutting cycle of 30 years. Results show that yields are sustained for three harvests following the first logging of primary forest, but that the composition of timber moves towards lightwooded species rather than hardwooded. The predicted size of extracted trees decreases and the number of trees extracted increases with successive harvests, leading to a prediction of increased costs and lower profits for the logging company despite constant yields. The standing volume of all trees just before harvest is reduced by 15% over 150 years, with pioneer species becoming increasingly prevalent in the stand. The model, in the SYMFOR framework, can be used to help understand the differences between alternative forest management strategies in the Brazilian Amazon. Such knowledge is required to improve forest management, regulation and certification, and help to conserve the worlds largest remaining tropical forest. (C) 2003 Elsevier B.V. All rights reserved.
Keywords: model; individual; tropical forest; tree; spatial; Brazil; Amazon; competition; species grouping; management; certification; regulation
|
|
|
|
Stahl, C., Herault, B., Rossi, V., Burban, B., Bréchet, C., & Bonal, D. (2013). Depth of soil water uptake by tropical rainforest trees during dry periods: Does tree dimension matter? Oecologia, 173(4), 1191–1201.
Abstract: Though the root biomass of tropical rainforest trees is concentrated in the upper soil layers, soil water uptake by deep roots has been shown to contribute to tree transpiration. A precise evaluation of the relationship between tree dimensions and depth of water uptake would be useful in tree-based modelling approaches designed to anticipate the response of tropical rainforest ecosystems to future changes in environmental conditions. We used an innovative dual-isotope labelling approach (deuterium in surface soil and oxygen at 120-cm depth) coupled with a modelling approach to investigate the role of tree dimensions in soil water uptake in a tropical rainforest exposed to seasonal drought. We studied 65 trees of varying diameter and height and with a wide range of predawn leaf water potential (Ψpd) values. We confirmed that about half of the studied trees relied on soil water below 100-cm depth during dry periods. Ψpd was negatively correlated with depth of water extraction and can be taken as a rough proxy of this depth. Some trees showed considerable plasticity in their depth of water uptake, exhibiting an efficient adaptive strategy for water and nutrient resource acquisition. We did not find a strong relationship between tree dimensions and depth of water uptake. While tall trees preferentially extract water from layers below 100-cm depth, shorter trees show broad variations in mean depth of water uptake. This precludes the use of tree dimensions to parameterize functional models. © 2013 Springer-Verlag Berlin Heidelberg.
Keywords: Deuterium; Oxygen; Root; Soil water; Tropical rainforest
|
|
