Marcon, E., & Puech, F. (2017). A typology of distance-based measures of spatial concentration. Regional Science and Urban Economics, 62, 56–67.
Abstract: Over the last decade, distance-based methods have been introduced and then improved in the field of spatial economics to gauge the geographic concentration of activities. There is a growing literature on this theme including new tools, discussions on their specific properties and various applications. However, there is currently no typology of distance-based methods. This paper fills that gap. The proposed classification helps understand all the properties of distance-based methods and proves that they are variations on the same framework. © 2016 Elsevier B.V.
Keywords: Agglomeration; Aggregation; Economic geography; Point patterns; Spatial concentration
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Zinger, L., Donald, J., Brosse, S., Gonzalez, M. A., Iribar, A., Leroy, C., et al. (2020). Advances and prospects of environmental DNA in neotropical rainforests. Adv. Ecol. Res., 62, 331–373.
Abstract: The rainforests of the Neotropics shelter a vast diversity of plant, animal and microscopic species that provide critical ecosystem goods and services for both local and worldwide populations. These environments face a major crisis due to increased deforestation, pollution, and climate change, emphasizing the need for more effective conservation efforts. The adequate monitoring of these ecosystems has proven a complex and time consuming endeavour, which depends on ever dwindling taxonomic expertise. To date, many species remain undiscovered, let alone described, with otherwise limited information regarding known species population distributions and densities. Overcoming these knowledge shortfalls and practical limitations is becoming increasingly possible through techniques based on environmental DNA (eDNA), i.e., DNA that can be obtained from environmental samples (e.g. tissues, soil, sediment, water, etc.). When coupled with high-throughput sequencing, these techniques now enable realistic, cost-effective, and standardisable biodiversity assessments. This opens up enormous opportunities for advancing our understanding of complex and species-rich tropical communities, but also in facilitating large-scale biomonitoring programs in the neotropics. In this review, we provide a brief introduction to eDNA methods, and an overview of their current and potential uses in both terrestrial and aquatic ecosystems of neotropical rainforests. We also discuss the limits and challenges of these methods for our understanding and monitoring of biodiversity, as well as future research and applied perspectives of these techniques in neotropical rainforests, and beyond. © 2020 Elsevier Ltd
Keywords: Biomonitoring; Conservation biology; DNA metabarcoding; eDNA; Environmental genomics; Neotropics; Rainforests
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Sayer, E. J., Rodtassana, C., Sheldrake, M., Bréchet, L. M., Ashford, O. S., Lopez-Sangil, L., et al. (2020). Revisiting nutrient cycling by litterfall—Insights from 15 years of litter manipulation in old-growth lowland tropical forest. Adv. Ecol. Res., 62, 173–223.
Abstract: The crucial role of tropical forests in the global carbon balance is underpinned by their extraordinarily high biomass and productivity, even though the majority of tropical forests grow on nutrient-poor soils. Nutrient cycling by litterfall has long been considered essential for maintaining high primary productivity in lowland tropical forests but few studies have tested this assumption experimentally. We review and synthesise findings from the Gigante Litter Manipulation Project (GLiMP), a long-term experiment in lowland tropical forest in Panama, Central America, in which litter has been removed from or added to large-scale plots for 15 years. We assessed changes in soil and litter nutrient concentrations in response to the experimental treatments and estimated nutrient return and nutrient use efficiency to indicate changes in nutrient cycling. The soil concentrations of most nutrients increased with litter addition and declined with litter removal. Litter removal altered nitrogen, potassium, manganese and zinc cycling, demonstrating the importance of litter inputs for maintaining the availability of these elements to plants. By contrast, litter addition only altered nitrogen cycling and, despite low concentrations of available soil phosphorus, the effects of litter manipulation on phosphorus cycling were inconsistent. We discuss potential mechanisms underlying the observed changes, and we emphasise the importance of decomposition processes in the forest floor for retaining nutrient elements, which partially decouples nutrient cycling from the mineral soil. Finally, by synthesising GLiMP studies conducted during 15 years of litter manipulation, we highlight key knowledge gaps and avenues for future research into tropical forest nutrient cycling. © 2020 Elsevier Ltd
Keywords: Forest floor; Litter addition; Litter removal; Litterfall; Nutrient cycling; Nutrient use efficiency; Soil fertility; Trace elements; Tropical lowland forest
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Guitet, S., Blanc, L., Trombe, P. J., & Lehallier, B. (2009). Silvicultural Treatments in the Tropical Forests of Guiana: A Review of Ten Years of Trials. Bois For. Trop., 63(301), 7–19.
Abstract: This article reviews an experimental system set up in French Guiana to test different selective thinning methods that started ten to fifteen years after logging in order to reconstitute commercially viable stands within the shortest time. The thinning methods tested involve a combination of selective intervention within a radius of 10 metres around crop trees and systematic intervention applied uniformly to the entire forest parcel. The resulting thinning intensity produces an 8% to 45% reduction in basal area. While the growth of the residual stand is strongly boosted in all species and for all diameters, there is little change in basal area because of high mortality and lower recruitment of commercial species. Standing commercial capital, however, is strongly affected by the thinning operations as defined. In effect, these thinning methods that benefit crop stems do not meet the objective of shorter rotations in Guiana's tropical logging forests. On the other hand, the measurements made in under-treatment stands agree with those obtained at the Paracou experimental station and confirm the need to adopt long cutting cycles of more than fifty years to ensure that the extraction of valuable species is sustainable in the current logging context in French Guiana.
Keywords: cutting cycle; thinning; stand dynamics; logging; French Guiana
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Scotti, I., Paglia, G., Magni, F., & Morgante, M. (2006). Population genetics of Norway spruce (Picea abies Karst.) at regional scale: sensitivity of different microsatellite motif classes in detecting differentiation. Ann. For. Sci., 63(5), 485–491.
Abstract: Four populations of Norway spruce (Picea abies Karst.) were screened using nine nuclear microsatellite markers (three trinucleotides and six dinucleotides) and four chloroplast markers (all mononucleotides). Marker classes were compared for their variability, mutation rate and ability to detect differentiation between stands. Dinucleotide markers proved to be the most variable group and chloroplast stretches the least variable, with differences in mutation rate between the former and the latter spanning over two orders of magnitude. Variability correlated to the number of repeats but not to the absolute length of the microsatellite region. The different marker classes were combined with two different measures of genetic distance in order to investigate the performance of markers and evolutionary models for the study of genetic variation in natural populations of Norway spruce. Weir and Cockeram's F-ST generally performed better in this clear-cut, four-population model study. Chloroplast haplotypes turned out to be the most sensitive marker system, being able to differentiate populations and to detect differences in genetic variability between sub-regions.
Keywords: conifers; SSR; divergence; statistical testing; genetic distance
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Marchal, R., Mothe, F., Denaud, L. E., Thibaut, B., & Bleron, L. (2009). Cutting forces in wood machining – Basics and applications in industrial processes. A review COST Action E35 2004-2008: Wood machining – micromechanics and fracture. Holzforschung, 63(2), 157–167.
Abstract: The data available in the literature concerning wood cutting forces permits to build models or to simulate the main wood machining processes ( milling, sawing, peeling, etc.). This approach contributes to a better understanding of formation of wood surfaces and chips and the data may be helpful to optimise cutting geometry, reduce tool wear, improve tool material, and to size tool-machines. The models may also be useful for industrial application in two ways: ( 1) providing data to optimise the settings for a given operation ( batch approach), and ( 2) building predictive models that could be the basis of an online control system for the machining processes ( interactive approach). A prerequisite for this is that numerous machining tests on different wood materials are performed based on experiences with different kind of tools and experimental devices. With a focus on potential industrial applications, the emphasis of this review was on the wood peeling process, which is a very demanding special case of wood cutting. Although not so many industrial machines are equipped with expensive force sensors, there is a lot of high quality information available about cutting forces which may be useful to improve the scientific or technological knowledge in wood machining. Alternative parameters, such as vibration or sound measurements, appear to be promising substitutes in the praxis, particularly to feed online control systems of any wood cutting process.
Keywords: cutting forces; online control; peeling process; physico-mechanical model; sound; vibrations; wood industry; wood machining
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Clair, B., Almeras, T., & Sugiyama, J. (2006). Compression stress in opposite wood of angiosperms: observations in chestnut, mani and poplar. Ann. For. Sci., 63(5), 507–510.
Abstract: In order to face environmental constraints, trees are able to re-orient their axes by controlling the stress level in the newly formed wood layers. Angiosperms and gymnosperms evolved into two distinct mechanisms: the former produce a wood with large tension pre-stress on the upper side of the tilted axis, while the latter produce a wood with large compression pre-stress on the lower side. In both cases, the difference between this stress level and that of the opposite side, in light tension, generates the bending of the axis. However, light values of compression were sometimes measured in the opposite side of angiosperms. By analysing old data on chestnut and mani and new data on poplar, this study shows that these values were not measurement artefacts. This reveals that generating light compression stress in opposite wood contributes to improve the performance of the re-orientation mechanism.
Keywords: reaction wood; compression wood; tension wood; opposite wood; plant biomechanics; growth stresses; microfibrils angle
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Gond, V., & Guitet, S. (2009). Remote Sensing in Post-Logging Diagnoses for Forest Management in French Guiana. Bois For. Trop., 63(299), 5–13.
Abstract: This study is part of the activities carried out to monitor tow-impact logging operations in humid tropical forests. The sustainability of these activities is highly dependent on the scale of logging damage, and managers therefore need to carry out effective checks on the quality of forestry work. In this study, remote sensing was used to track the extension of logging operations and to assess damage, through images acquired during and after logging in each parcel. Analysis of the high-resolution images (10 m) clearly identifies logged-over clearings and some skidding tracks, allowing assessments of gaps opening up in the canopy. Several parcels were monitored in this French Guiana study. A simple diagnostic procedure was established for each parcel to assess logging intensity and identify new logging tracks and timber losses. The remote sensing toot thus helps to make more accurate assessments of logging quality and to draw relevant conclusions for the logging company. The study has demonstrated the usefulness of remote sensing to identify damage after logging. The quality of restitution of the damage was validated by means of a database on the logging terrain and through field missions. This post-logging inspection tool can now be automated for fully operational use by forest managers.
Keywords: selective logging; logging impact inspections; French Guiana; remote sensing; forest management
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Delph, L. F., Arntz, A. M., Scotti-Saintagne, C., & Scotti, I. (2010). The Genomic Architecture of Sexual Dimorphism in the Dioecious Plant Silene Latifolia. Evolution, 64(10), 2873–2886.
Abstract: Evaluating the genetic architecture of sexual dimorphism can aid our understanding of the extent to which shared genetic control of trait variation versus sex-specific control impacts the evolutionary dynamics of phenotypic change within each sex. We performed a QTL analysis on Silene latifolia to evaluate the contribution of sex-specific QTL to phenotypic variation in 46 traits, whether traits involved in trade-offs had colocalized QTL, and whether the distribution of sex-specific loci can explain differences between the sexes in their variance/covariance matrices. We used a backcross generation derived from two artificial-selection lines. We found that sex-specific QTL explained a significantly greater percent of the variation in sexually dimorphic traits than loci expressed in both sexes. Genetically correlated traits often had colocalized QTL, whose signs were in the expected direction. Lastly, traits with different genetic correlations within the sexes displayed a disproportionately high number of sex-specific QTL, and more QTL co-occurred in males than females, suggesting greater trait integration. These results show that sex differences in QTL patterns are congruent with theory on the resolution of sexual conflict and differences based on G-matrix results. They also suggest that trade-offs and trait integration are likely to affect males more than females.
Keywords: Artificial selection; genetic correlations; linkage map; sex-specific expression; sexual conflict
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Royer, M., Stien, D., Beauchene, J., Herbette, G., McLean, J. P., Thibaut, A., et al. (2010). Extractives of the tropical wood wallaba (Eperua falcata Aubl.) as natural anti-swelling agents. Holzforschung, 64(2), 211–215.
Abstract: Wallaba (Eperua falcata) is a tropical wood that is known to have naturally high moisture related dimensional stability. Samples of wallaba heartwood were subjected to differential solvent extraction. Wood pieces that were extracted with methanol showed significantly greater swelling following rehydration from oven dry to 96% relative humidity than non- extracted samples and samples extracted with other solvents. Methanol soluble wallaba heartwood extract was purified by HPLC and the compounds present were characterized by NMR spectroscopy. The structure of 13 compounds in methanol extract was identified. The relative proportion of polar compounds in methanol extract was found to be high. The compounds identified are proposed to bind to the polymeric cell wall by means of multiple hydrogen bonds restricting the association of water and therefore act as natural anti-swelling agents.
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