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Rifflet, A.; Tene, N.; Orivel, J.; Treilhou, M.; Dejean, A.; Vetillard, A. |
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Paralyzing Action from a Distance in an Arboreal African Ant Species |
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2011 |
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PLoS One |
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PLoS ONE |
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6 |
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12 |
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e28571 |
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Due to their prowess in interspecific competition and ability to catch a wide range of arthropod prey (mostly termites with which they are engaged in an evolutionary arms race), ants are recognized as a good model for studying the chemicals involved in defensive and predatory behaviors. Ants' wide diversity of nesting habits and relationships with plants and prey types implies that these chemicals are also very diverse. Using the African myrmicine ant Crematogaster striatula as our focal species, we adopted a three-pronged research approach. We studied the aggressive and predatory behaviors of the ant workers, conducted bioassays on the effect of their Dufour gland contents on termites, and analyzed these contents. (1) The workers defend themselves or eliminate termites by orienting their abdominal tip toward the opponent, stinger protruded. The chemicals emitted, apparently volatile, trigger the recruitment of nestmates situated in the vicinity and act without the stinger having to come into direct contact with the opponent. Whereas alien ants competing with C. striatula for sugary food sources are repelled by this behavior and retreat further and further away, termites defend their nest whatever the danger. They face down C. striatula workers and end up by rolling onto their backs, their legs batting the air. (2) The bioassays showed that the toxicity of the Dufour gland contents acts in a time-dependent manner, leading to the irreversible paralysis, and, ultimately, death of the termites. (3) Gas chromatography-mass spectrometry analyses showed that the Dufour gland contains a mixture of mono- or polyunsaturated long-chain derivatives, bearing functional groups like oxo-alcohols or oxo-acetates. Electrospray ionization-mass spectrometry showed the presence of a molecule of 1584 Da that might be a large, acetylated alkaloid capable of splitting into smaller molecules that could be responsible for the final degree of venom toxicity. |
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Levionnois, S.; Tysklind, N.; Nicolini, E.; Ferry, B.; Troispoux, V.; Le Moguedec, G.; Morel, H.; Stahl, C.; Coste, S.; Caron, H.; Heuret, P. |
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Soil variation response is mediated by growth trajectories rather than functional traits in a widespread pioneer Neotropical tree |
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2020 |
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bioRxiv, peer-reviewed by Peer Community in Ecology |
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351197 |
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v4 |
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Trait-environment relationships have been described at the community level across tree species. However, whether interspecific trait-environment relationships are consistent at the intraspecific level is yet unknown. Moreover, we do not know how consistent is the response between organ vs. whole-tree level.We examined phenotypic variability for 16 functional leaf (dimensions, nutrient, chlorophyll) and wood traits (density) across two soil types, Ferralitic Soil (FS) vs. White Sands (WS), on two sites for 70 adult trees of Cecropia obtusa Trécul (Urticaceae) in French Guiana. Cecropia is a widespread pioneer Neotropical genus that generally dominates early successional forest stages. To understand how soil types impact resource-use through the processes of growth and branching, we examined the architectural development with a retrospective analysis of growth trajectories. We expect soil types to affect both, functional traits in relation to resource acquisition strategy as already described at the interspecific level, and growth strategies due to resource limitations with reduced growth on poor soils.Functional traits were not involved in the soil response, as only two traits-leaf residual water content and K content-showed significant differences across soil types. Soil effects were stronger on growth trajectories, with WS trees having the slowest growth trajectories and less numerous branches across their lifespan.The analysis of growth trajectories based on architectural analysis improved our ability to characterise the response of trees with soil types. The intraspecific variability is higher for growth trajectories than functional traits for C. obtusa, revealing the complementarity of the architectural approach with the functional approach to gain insights on the way trees manage their resources over their lifetime. Soil-related responses of Cecropia functional traits are not the same as those at the interspecific level, suggesting that the effects of the acting ecological processes are different between the two levels. Apart from soil differences, much variation was found across sites, which calls for further investigation of the factors shaping growth trajectories in tropical forests. |
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931 |
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Gourlet-Fleury, S.; Gazull, L.; Bigombe Logo, P.; Billand, A.; Bolaluembe, P.-C.; Boyemba, F.; Dessard, H.; Doucet, J.-L.; Doumenge, C.; Dubiez, E.; Durrieu De Madron, L.; Feintrenie, L.; Fomete, T.; Garcia, C.; Gillet, J.-F.; Herault, B.; Karsenty, A.; Menga, P.; Ngoya Kessy, A.M.; Pietsch, S.; Putz, J.; Rossi, V.; Sayer, J.; Sist, P.; Zongang Ngongang, A.A. |
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Are logging concessions a threat to the peatlands in DRC? |
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2017 |
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Bois et Forets des Tropiques |
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334 |
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3-6 |
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Université du Maine, France |
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Export Date: 23 January 2018 |
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EcoFoG @ webmaster @ |
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788 |
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ter Steege, H.; Pitman, N.C.A.; Killeen, T.J.; Laurance, W.F.; Peres, C.A.; Guevara, J.E.; Salomão, R.P.; Castilho, C.V.; Amaral, I.L.; de Almeida Matos, F.D.; de Souza Coelho, L.; Magnusson, W.E.; Phillips, O.L.; de Andrade Lima Filho, D.; de Jesus Veiga Carim, M.; Irume, M.V.; Martins, M.P.; Molino, J.-F.; Sabatier, D.; Wittmann, F.; López, D.C.; da Silva Guimarães, J.R.; Mendoza, A.M.; Vargas, P.N.; Manzatto, A.G.; Reis, N.F.C.; Terborgh, J.; Casula, K.R.; Montero, J.C.; Feldpausch, T.R.; Honorio Coronado, E.N.; Montoya, A.J.D.; Zartman, C.E.; Mostacedo, B.; Vasquez, R.; Assis, R.L.; Medeiros, M.B.; Simon, M.F.; Andrade, A.; Camargo, J.L.; Laurance, S.G.W.; Nascimento, H.E.M.; Marimon, B.S.; Marimon, B.-H.; Costa, F.; Targhetta, N.; Vieira, I.C.G.; Brienen, R.; Castellanos, H.; Duivenvoorden, J.F.; Mogollón, H.F.; Piedade, M.T.F.; Aymard C., G.A.; Comiskey, J.A.; Damasco, G.; Dávila, N.; García-Villacorta, R.; Diaz, P.R.S.; Vincentini, A.; Emilio, T.; Levis, C.; Schietti, J.; Souza, P.; Alonso, A.; Dallmeier, F.; Ferreira, L.V.; Neill, D.; Araujo-Murakami, A.; Arroyo, L.; Carvalho, F.A.; Souza, F.C.; Amaral, D.D. do; Gribel, R.; Luize, B.G.; Pansonato, M.P.; Venticinque, E.; Fine, P.; Toledo, M.; Baraloto, C.; Cerón, C.; Engel, J.; Henkel, T.W.; Jimenez, E.M.; Maas, P.; Mora, M.C.P.; Petronelli, P.; Revilla, J.D.C.; Silveira, M.; Stropp, J.; Thomas-Caesar, R.; Baker, T.R.; Daly, D.; Paredes, M.R.; da Silva, N.F.; Fuentes, A.; Jørgensen, P.M.; Schöngart, J.; Silman, M.R.; Arboleda, N.C.; Cintra, B.B.L.; Valverde, F.C.; Di Fiore, A.; Phillips, J.F.; van Andel, T.R.; von Hildebrand, P.; Barbosa, E.M.; de Matos Bonates, L.C.; de Castro, D.; de Sousa Farias, E.; Gonzales, T.; Guillaumet, J.-L.; Hoffman, B.; Malhi, Y.; de Andrade Miranda, I.P.; Prieto, A.; Rudas, A.; Ruschell, A.R.; Silva, N.; Vela, C.I.A.; Vos, V.A.; Zent, E.L.; Zent, S.; Cano, A.; Nascimento, M.T.; Oliveira, A.A.; Ramirez-Angulo, H.; Ramos, J.F.; Sierra, R.; Tirado, M.; Medina, M.N.U.; van der Heijden, G.; Torre, E.V.; Vriesendorp, C.; Wang, O.; Young, K.R.; Baider, C.; Balslev, H.; de Castro, N.; Farfan-Rios, W.; Ferreira, C.; Mendoza, C.; Mesones, I.; Torres-Lezama, A.; Giraldo, L.E.U.; Villarroel, D.; Zagt, R.; Alexiades, M.N.; Garcia-Cabrera, K.; Hernandez, L.; Huamantupa-Chuquimaco, I.; Milliken, W.; Cuenca, W.P.; Pansini, S.; Pauletto, D.; Arevalo, F.R.; Sampaio, A.F.; Valderrama Sandoval, E.H.; Gamarra, L.V. |
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Estimating the global conservation status of more than 15,000 Amazonian tree species |
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2015 |
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Science Advances |
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1 |
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10 |
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Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened plant species on Earth by 22%. We show that the trends observed in Amazonia apply to trees throughout the tropics, and we predict that most of the world’s >40,000 tropical tree species now qualify as globally threatened. A gap analysis suggests that existing Amazonian protected areas and indigenous territories will protect viable populations of most threatened species if these areas suffer no further degradation, highlighting the key roles that protected areas, indigenous peoples, and improved governance can play in preventing large-scale extinctions in the tropics in this century. |
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665 |
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Lang, G.; Marcon, E. |
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Testing randomness of spatial point patterns with the Ripley statistic |
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2013 |
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ESAIM: Probability and Statistics |
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ESAIM PS |
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17 |
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767-788 |
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Central limit theorem, goodness-of-fit test, Höffding decomposition, null, point pattern, Poisson process, null |
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Aggregation patterns are often visually detected in sets of location data. These clusters may be the result of interesting dynamics or the effect of pure randomness. We build an asymptotically Gaussian test for the hypothesis of randomness corresponding to a homogeneous Poisson point process. We first compute the exact first and second moment of the Ripley K-statistic under the homogeneous Poisson point process model. Then we prove the asymptotic normality of a vector of such statistics for different scales and compute its covariance matrix. From these results, we derive a test statistic that is chi-square distributed. By a Monte-Carlo study, we check that the test is numerically tractable even for large data sets and also correct when only a hundred of points are observed |
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Gruhn, G.; Dumez, S.; Moreau, P.-A.; Roy, M.; Morreale, O.; Schimann, H.; Courtecuisse, R.. |
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The genus Resinicium in French Guiana and the West Indies: a morphological and molecular survey, revealing Resinicium grandisporum sp. nov. |
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2017 |
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Cryptogamie, Mycologie |
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38 |
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4 |
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1-15 |
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A revision of Resinicium collections (Basidiomycota, Hymenochaetales) from French Guiana and French West Indies is provided, and a new species, Resinicium grandisporum sp. nov., supported by morphological as well as phylogenetic analyses based on ITS DNA sequences, is described and illustrated. An updated key of the genus Resinicium is also provided, which includes species previously described from outside of the studied area. |
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779 |
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Leponce, M.;Delabie, J.H.C.;Orivel, J.;Jacquemin, J.;Calvo Martin, M.;Dejean, A. |
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Tree-dwelling ant survey (Hymenoptera, Formicidae) in Mitaraka, French Guiana |
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2019 |
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Zoosystema |
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40 |
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sp1 |
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163-179 |
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Ants constitute a substantial part of the arthropod biomass in rainforests. Most studies have focused on ground-dwelling ants, which constitute almost half of the diversity of the ant assemblage. We report here the results of the first survey of tree-dwelling ants in French Guiana on a plateau and in a swamp palm forest (Euterpe oleracea Mart.) in the Mitaraka Mountains. We were interested in seeing the effect of topography and geographic distance on species richness and composition and to gather information on the species distribution on tree trunks. The fauna of Mitaraka was compared with one from a site 350 km distant (Petit Saut). In total 105 trees were sampled (30, 30, 45 in the plateau and the swamp forests of Mitaraka, and in Petit Saut plateau forest, respectively). Arboreal ants were attracted using tuna and honey baits spread along a rope reaching an upper branch, except for the palm swamp forest where the baits were only placed at 2 m high. A total of 34, 13 and 22 species were observed in these three respective sites. Six of these species are new records for French Guiana. In Mitaraka Camponotus femoratus (Fabricius, 1804) and Crematogaster leviorLongino, 2003 co-occurred on trees (parabiotic association) and were among the most common species, along with Crematogaster tenuiculaForel, 1904 which was found on other trees (species exclusion). The Mitaraka Mountains appeared more species rich and had a species composition distinct from Petit Saut. Topography also influenced ant species composition. Almost half of the species collected by the baitline method were exclusively foraging in the canopy. |
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883 |
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Harper, Anna B. ; Williams, Karina E. ; McGuire, Patrick ; Duran Rojas, Maria Carolina ; Hemming, Debbie ; Verhoef, Anne ; Huntingford, Chris ; Rowland, Lucy ; Marthews, Toby ; Breder Eller, Cleiton ; Mathison, Camilla ; Nobrega, Rodolfo L.B. ; Gedney, Nicola ; Vidale, Pier Luigi ; Otu-Larbi, Fred ; Pandey, Divya |
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Improvement of modeling plant responses to low soil moisture in JULESvn4.9 and evaluation against flux tower measurements |
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2021 |
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Geoscientific Model Development |
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14 |
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3269-3294 |
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Drought is predicted to increase in the future due to climate change, bringing with it myriad impacts on ecosystems. Plants respond to drier soils by reducing stomatal conductance in order to conserve water and avoid hydraulic damage. Despite the importance of plant drought responses for the global carbon cycle and local and regional climate feedbacks, land surface models are unable to capture observed plant responses to soil moisture stress. We assessed the impact of soil moisture stress on simulated gross primary productivity (GPP) and latent energy flux (LE) in the Joint UK Land Environment Simulator (JULES) vn4.9 on seasonal and annual timescales and evaluated 10 different representations of soil moisture stress in the model. For the default configuration, GPP was more realistic in temperate biome sites than in the tropics or high-latitude (cold-region) sites, while LE was best simulated in temperate and high-latitude (cold) sites. Errors that were not due to soil moisture stress, possibly linked to phenology, contributed to model biases for GPP in tropical savanna and deciduous forest sites. We found that three alternative approaches to calculating soil moisture stress produced more realistic results than the default parameterization for most biomes and climates. All of these involved increasing the number of soil layers from 4 to 14 and the soil depth from 3.0 to 10.8 m. In addition, we found improvements when soil matric potential replaced volumetric water content in the stress equation (the “soil14psi” experiments), when the critical threshold value for inducing soil moisture stress was reduced (“soil14p0”), and when plants were able to access soil moisture in deeper soil layers (“soil14_dr*2”). For LE, the biases were highest in the default configuration in temperate mixed forests, with overestimation occurring during most of the year. At these sites, reducing soil moisture stress (with the new parameterizations mentioned above) increased LE and increased model biases but improved the simulated seasonal cycle and brought the monthly variance closer to the measured variance of LE. Further evaluation of the reason for the high bias in LE at many of the sites would enable improvements in both carbon and energy fluxes with new parameterizations for soil moisture stress. Increasing the soil depth and plant access to deep soil moisture improved many aspects of the simulations, and we recommend these settings in future work using JULES or as a general way to improve land surface carbon and water fluxes in other models. In addition, using soil matric potential presents the opportunity to include plant functional type-specific parameters to further improve modeled fluxes. |
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European Geosciences Union |
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Poyatos, Rafael ; Granda, Victor ; Flo, Victor ; Adams, Mark A. ; Adorjan, Balazs ; Aguadé, David ; Aidar, Marcos P.M. ; Allen, Scott ; Alvarado-Barrientos, M.Susana ; Anderson-Teixeira, Kristina J. ; Aparecido, Luiza Maria ; Arain, M. Altaf ; Aranda, Ismael ; Asbjornsen, Heidi ; Baxter, Robert |
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Global transpiration data from sap flow measurements: the SAPFLUXNET database |
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2021 |
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Earth System Science Data |
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13 |
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2607–2649 |
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Plant transpiration links physiological responses of vegetation to water supply and demand with hydrological, energy, and carbon budgets at the land–atmosphere interface. However, despite being the main land evaporative flux at the global scale, transpiration and its response to environmental drivers are currently not well constrained by observations. Here we introduce the first global compilation of whole-plant transpiration data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021). We harmonized and quality-controlled individual datasets supplied by contributors worldwide in a semi-automatic data workflow implemented in the R programming language. Datasets include sub-daily time series of sap flow and hydrometeorological drivers for one or more growing seasons, as well as metadata on the stand characteristics, plant attributes, and technical details of the measurements. SAPFLUXNET contains 202 globally distributed datasets with sap flow time series for 2714 plants, mostly trees, of 174 species. SAPFLUXNET has a broad bioclimatic coverage, with woodland/shrubland and temperate forest biomes especially well represented (80 % of the datasets). The measurements cover a wide variety of stand structural characteristics and plant sizes. The datasets encompass the period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are available for most of the datasets, while on-site soil water content is available for 56 % of the datasets. Many datasets contain data for species that make up 90 % or more of the total stand basal area, allowing the estimation of stand transpiration in diverse ecological settings. SAPFLUXNET adds to existing plant trait datasets, ecosystem flux networks, and remote sensing products to help increase our understanding of plant water use, plant responses to drought, and ecohydrological processes. SAPFLUXNET version 0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The “sapfluxnetr” R package – designed to access, visualize, and process SAPFLUXNET data – is available from CRAN. |
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EcoFoG @ webmaster @ |
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1058 |
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Heuertz, M.; Caron, H.; Scotti-Saintagne, C.; Pétronelli, P.; Engel, J.; Tysklind, N.; Miloudi, S.; Gaiotto, F.A.; Chave, J.; Molino, J.-F.; Sabatier, D.; Loureiro, J.; Budde, K.B. |
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The hyperdominant tropical tree Eschweilera coriacea (Lecythidaceae) shows higher genetic heterogeneity than sympatric Eschweilera species in French Guiana |
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2020 |
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Plant Ecology and Evolution |
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Plant Ecol. Evol. |
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153 |
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1 |
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67-81 |
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Cryptic species; Eschweilera; Hyperdominant tropical trees; Microsatellites; Species complex; Species delimitation |
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Background and aims – The evolutionary history of Amazonia’s hyperabundant tropical tree species, also known as “hyperdominant” species, remains poorly investigated. We assessed whether the hyperdominant Eschweilera coriacea (DC.) S.A.Mori (Lecythidaceae) represents a single genetically cohesive species, and how its genetic constitution relates to other species from the same clade with which it occurs sympatrically in French Guiana. Methods – We sampled 152 individuals in nine forest sites in French Guiana, representing 11 species of the genus Eschweilera all belonging to the Parvifolia clade, with emphasis on E. coriacea. Samples were genotyped at four simple sequence repeat (SSR) markers. We delimited gene pools, i.e., genetically coherent putative taxa, using STRUCTURE software and principal component analysis. We compared the genetic assignment of individuals with their morphological species determination and estimated genetic diversity and differentiation for gene pools and species. We also estimated genome size using flow cytometry. Key results – SSR profiles commonly displayed up to four alleles per genotype, suggesting that the investigated Eschweilera species bear a paleopolyploid signature. Flow cytometry suggested that the studied species are diploid with haploid genome sizes of 871–1046 Mbp. We detected five gene pools and observed a good correspondence between morphological and genetic delimitation for Eschweilera sagotiana Miers and the undescribed morphospecies E. sp. 3 (which resembles E. grandiflora (Aubl.) Sandwith), and to a lesser extent for E. decolorans Sandwith and E. micrantha (O.Berg) Miers. Eschweilera coriacea was the most genetically diverse species and included individuals assigned to each gene pool. Conclusions – We found no conclusive evidence for cryptic species within E. coriacea in French Guiana. SSRs detected fewer gene pools than expected based on morphology in the Parvifolia clade but discriminated evolutionary relationships better than available plastid markers. A positive trend between demographic abundance of species and allelic richness illustrates that hyperdominants may have a high evolutionary potential. This hypothesis can be tested using more powerful genomic data in combination with tree phenotypic trait variation and characterization of niche breadth, to enhance our understanding of the causes of hyperdominance in Amazonian trees. |
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University of Copenhagen, Forest, Nature and Biomass, Rolighedsvej 23, Frederiksberg C, DK-1958, Denmark |
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Societe Royale de Botanique de Belgique |
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20323913 (Issn) |
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EcoFoG @ webmaster @ |
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928 |
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