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Bereau, M., Bonal, D., Louisanna, E., & Garbaye, J. (2005). Do mycorrhizas improve tropical tree seedling performance under water stress and low light conditions? A case study with Dicorynia guianensis (Caesalpiniaceae). J. Trop. Ecol., 21, 375–381.
Abstract: We tested the response of seedlings of Diconyina guianensis, a major timber tree species of French Guiana, to mycorrhizal symbiosis and water limitation in a semi-con trolled experiment under natural light conditions. Under well-watered conditions, mycorrhizal colonization resulted in an increase of net photosynthesis, growth and phosphorus uptake. When submitted to water stress, no growth reduction of mycorrhizal seedlings was observed. Mycorrhizal seedlings were more sensitive to drought than non-mycorrhizal ones in terms of carbon assimilation, but not with regard to stomatal closure. In contrast to previous studies on temperate tree seedlings, this result precludes a mycorrhizal effect on the hydraulic properties of this species. Furthermore, our results suggest that below a specific threshold of soil moisture, carbon assimilation of D. guianensis seedlings was decreased by the mycorrhizal symbiosis. This is probably related to the competition between the plant and its host fungus for carbon allocation under low light intensity, even though it did not seem to have a significant effect on mortality in our experiment.
Keywords: French Guiana; leaf gas exchange; mycorrhizal symbiosis; tropical forest; water limitation
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Baraloto, C., & Goldberg, D. E. (2004). Microhabitat associations and seedling bank dynamics in a neotropical forest. Oecologia, 141(4), 701–712.
Abstract: We conducted a rigorous test of tropical tree seedling microhabitat differentiation by examining microhabitat associations, survival and growth of established seedlings of ten tropical tree species representing a four-factor gradient in seed size. Eight microhabitat variables describing soil and light conditions were measured directly adjacent to each of 588 seedlings within twelve 10 x 100 m belt transects at Paracou, French Guiana, and at 264 reference points along the transects. From these measurements, we defined three principal components describing soil richness, soil softness and canopy openness. Six of ten species ( in 9 of 30 total cases) were distributed non-randomly with respect to microhabitat along at least one principal component. However, few species demonstrated clear microhabitat specialization. All shifts in distribution relative to reference points were in the same direction ( richer, softer soil). Furthermore, of 135 pairwise comparisons among the species, only 7 were significantly different. More than three-fourths of all seedlings (75.3%) survived over the 2-year monitoring period, but survival rates varied widely among species. In no case was the probability of survival influenced by any microhabitat parameter. Relative height growth rates for the seedlings over 2 years varied from – 0.031 cm cm(-1) year(-1) (Dicorynia guianensis, Caesalpiniaceae) to 0.088 cm cm(-1) year(-1) (Virola michelii, Myristicaceae). In only 4 of 30 cases was height growth significantly associated with one of the three principal components. Because the conditions in this study were designed to maximize the chance of finding microhabitat differentiation among a group of species differing greatly in life history traits, the lack of microhabitat specialization it uncovered suggests that microhabitat partitioning among tropical tree species at the established seedling stage is unlikely to contribute greatly to coexistence among these species.
Keywords: French Guiana; life history traits; light availability; regeneration niche; soil nutrients
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Phillips, P. D., Thompson, I. S., Silva, J. N. M., van Gardingen, P. R., & Degen, B. (2004). Scaling up models of tree competition for tropical forest population genetics simulation. Ecol. Model., 180(2-3), 419–434.
Abstract: Understanding the effects of logging activity on genetic diversity is an important aspect of establishing the sustainability of selective logging management operations in tropical forests. Genetic variation is affected by selective logging directly, through the removal of and damage to trees within the population, and indirectly, through a change in the forest structure and environment in which the remaining population lives. Eco-Gene is a population genetics model applied to tropical forests over a scale of hundreds of hectares. SYMFOR is a modelling framework for individual-based spatially explicit ecological and management models applied to tropical forests over a scale of 0.25 4 ha. We have linked the models to enable simulations using processes involved in both models. To overcome problems of scale, the spatially explicit competition index calculated in SYMFOR simulations has been modelled such that it can be applied at scales representing much larger areas for which the data are not available, as required by Eco-Gene. The competition index is modelled as a distribution on a grid-square basis, and implemented in the linked Eco-Gene/SYMFOR system. Each tree within a grid-square is given a “relative competition” within the distribution, biased according to species. A competition index value is obtained for the tree by transforming the grid-square distribution to be relevant to the size of the tree, and extracting a value according to the tree's relative competition within the distribution. The distribution and each tree's relative competition within it change according to the effects of growth, mortality and logging activity. The model was calibrated using data from the Tapajos region of the Eastern Amazon forest. This paper describes the model, its calibration and validation and the implications of scaling up from an explicit representation to a modelled quantity. (C) 2004 Elsevier B.V. All rights reserved.
Keywords: tropical rain; forest; population genetics; model SYMFOR; eco-gene; scaling up; competition
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Eva, H. D., Belward, A. S., De Miranda, E. E., Di Bella, C. M., Gond, V., Huber, O., et al. (2004). A land cover map of South America. Glob. Change Biol., 10(5), 731–744.
Abstract: A digital land cover map of South America has been produced using remotely sensed satellite data acquired between 1995 and the year 2000. The mapping scale is defined by the 1 km spatial resolution of the map grid-cell. In order to realize the product, different sources of satellite data were used, each source providing either a particular parameter of land cover characteristic required by the legend, or mapping a particular land cover class. The map legend is designed both to fit requirements for regional climate modelling and for studies on land cover change. The legend is also compatible with a wider, global, land cover mapping exercise, which seeks to characterize the world's land surface for the year 2000. As a first step, the humid forest domain has been validated using a sample of high-resolution satellite images. The map demonstrates both the major incursions of agriculture into the remaining forest domains and the extensive areas of agriculture, which now dominate South America's grasslands.
Keywords: Amazonia; ecosystems; land cover; mapping; South America; vegetation classes
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Roggy, J. C., Moiroud, A., Lensi, R., & Domenach, A. M. (2004). Estimating N transfers between N-2-fixing actinorhizal species and the non-N-2-fixing Prunus avium under partially controlled conditions. Biol. Fertil. Soils, 39(5), 312–319.
Abstract: Two methods of N transfer between plants-by litter decomposition and root-to-root exchange-were examined in mixed plantations of N-fixing and non-fixing trees. Nitrogen transfers from decaying litters were measured by placing N-15-labelled litters from four actinorhizal tree species around shoots of containerized Prunus avium. Nitrogen transfers by root-to-root exchanges were measured after foliar NO3-N-15 fertilization of Alnus subcordata and Elaeagnus angustifolia growing in containers in association with P. avium. During the first 2 years of litter decomposition, from 5-20% of the N, depending on the litter identity, was released and taken up by P. avium. N availability in the different litters was strongly correlated with the amount of water-soluble N, which was highest in leaves of E. angustifolia. In the association between fixing and non-fixing plants, 7.5% of the A. subcordata N and 25% of E. angustifolia N was transferred to P. avium by root exchange. These results showed that the magnitude of N transfers by root exchange depended on the associated N-2-fixing species. Among the species investigated, E. angustifolia displayed the highest capacity for exudating N from roots as well as for releasing N from litters. These qualities make this tree a promising species for enhancing wood yields in mixed stands.
Keywords: actinorhizal trees; mixed culture; litter; N transfer by roots; N-15
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Latouche-Halle, C., Ramboer, A., Bandou, E., Caron, H., & Kremer, A. (2004). Long-distance pollen flow and tolerance to selfing in a neotropical tree species. Mol. Ecol., 13(5), 1055–1064.
Abstract: Outcrossing rates, pollen dispersal and male mating success were assessed in Dicorynia guianensis Amshoff, a neotropical tree endemic to the Guiana shield. All adult trees within a continuous area of 40 ha (n = 157) were mapped, and were genotyped with six microsatellite loci. In addition, progenies were genotyped from 22 mature trees. At the population level, the species was mostly outcrossing (t(m) = 0.89) but there was marked variation among individuals. One tree exhibited mixed mating, confirming earlier results obtained with isozymes that D. guianensis can tolerate selfing. A Bayesian extension of the fractional paternity method was used for paternity analysis, and was compared with the neighbourhood method used widely for forest trees. Both methods indicated that pollen dispersal was only weakly related to distance between trees within the study area, and that the majority (62%) of pollen came from outside the study stand. Using maximum likelihood, male potential population size was estimated to be 1119, corresponding to a neighbourhood size of 560 hectares. Male mating success was, however, related to the diameter of the stem and to flowering intensity assessed visually. The mating behaviour of D. guianensis is a combination of long-distance pollen flow and occasional selfing. The species can still reproduce when it is extremely rare, either by selfing or by dispersing pollen at long distances. These results, together with the observation that male mating success was correlated with the size of the trees, could be implemented in management procedures aiming at regenerating the species.
Keywords: Dicorynia guianensis; microsatellites; outcrossing rate; pollen flow; reproductive success; tropical tree
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Phillips, P. D., de Azevedo, C. P., Degen, B., Thompson, I. S., Silva, J. N. M., & van Gardingen, P. R. (2004). An individual-based spatially explicit simulation model for strategic forest management planning in the eastern Amazon. Ecol. Model., 173(4), 335–354.
Abstract: A model to simulate the ecological processes of tree growth, mortality and recruitment, and the processes of forest management, in the terra firme forests of the eastern Amazon is described. It is implemented within the SYMFOR (http://www.symfor.org) framework. It is based on measurements of all trees that have a diameter greater than 5 cm from experimental plots in the Jari Cellulose and Tapajos National Forest areas over a 16-year period. Ten species groups are used to describe the natural processes affecting tree behaviour. Growth rates are calculated for each species group using the tree diameter and a competition index. Mortality and recruitment are simulated as stochastic processes. Recruitment probability is based on the predicted growth rate of a hypothetical tree. Options exist to vary the human interaction with the forest reflecting forest management decisions, as for other SYMFOR models. Model evaluation compares the performance of the model with data describing forest recovery for 16 years following logging. The model was applied to simulate current forest management practice in the Brazilian Amazon, with 40 m(3) ha(-1) of timber extracted with a cutting cycle of 30 years. Results show that yields are sustained for three harvests following the first logging of primary forest, but that the composition of timber moves towards lightwooded species rather than hardwooded. The predicted size of extracted trees decreases and the number of trees extracted increases with successive harvests, leading to a prediction of increased costs and lower profits for the logging company despite constant yields. The standing volume of all trees just before harvest is reduced by 15% over 150 years, with pioneer species becoming increasingly prevalent in the stand. The model, in the SYMFOR framework, can be used to help understand the differences between alternative forest management strategies in the Brazilian Amazon. Such knowledge is required to improve forest management, regulation and certification, and help to conserve the worlds largest remaining tropical forest. (C) 2003 Elsevier B.V. All rights reserved.
Keywords: model; individual; tropical forest; tree; spatial; Brazil; Amazon; competition; species grouping; management; certification; regulation
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de Grandcourt, A., Epron, D., Montpied, P., Louisanna, E., Bereau, M., Garbaye, J., et al. (2004). Contrasting responses to mycorrhizal inoculation and phosphorus availability in seedlings of two tropical rainforest tree species. New Phytol., 161(3), 865–875.
Abstract: This work aimed at understanding the role of mycorrhizal status in phosphorus efficiency of tree seedlings in the tropical rainforest of French Guyana. Mycorrhizal colonization, growth, phosphorus content, net photosynthesis and root respiration were determined on three occasions during a 9-month growth period for seedlings of two co-occurring species (Dicorynia guianensis and Eperua falcata) grown at three soil phosphorus concentrations, with or without inoculation with arbuscular mycorrhizas. Seedlings of both species were unable to absorb phosphorus in the absence of mycorrhizal association. Mycorrhizal seedlings exhibited coils that are specific of Paris-type mycorrhizae. Both species benefited from the mycorrhizal symbiosis in terms of phosphorus acquisition but the growth of E. falcata seedlings was unresponsive to this mycorrhizal improvement of phosphorus status, probably because of the combination of high seed mass and P reserves, with low growth rate. The two species belong to two different functional groups regarding phosphorus acquisition, D. guianensis being an obligate mycotrophic species.
Keywords: phosphorus; growth; efficiency; Paris-type arbuscular mycorrhizas; tropical rainforest; seedlings; Dicorynia guianensis; Eperua falcata
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Dutech, C., Joly, H. I., & Jarne, P. (2004). Gene flow, historical population dynamics and genetic diversity within French Guianan populations of a rainforest tree species, Vouacapoua americana. Heredity, 92(2), 69–77.
Abstract: Both gene flow and historical events influence the genetic diversity of natural populations. One way to understand their respective impact is to analyze population genetic structure at large spatial scales. We studied the distribution of genetic diversity of 17 populations of Vouacapoua americana (Caesalpiniaceae) in French Guiana, using nine micro satellite loci. Low genetic diversity was observed within populations, with a mean allelic richness and gene diversity of 4.1 and 0.506, respectively, which could be due to low effective population size and/or past bottlenecks. Using the regression between F-st/(1-F-st), estimated between pairs of populations, and the logarithm of the geographical distance, the spatial genetic structure can partly be explained by isolation-by-distance and limited gene flow among populations. This result is in agreement with the species' biology, including seed and pollen dispersal by rodents and insects, respectively. In contrast, no clear genetic signal of historical events was found when examining genetic differentiation among populations in relation to biogeographical hypotheses or by testing for bottlenecks within populations. Our conclusion is that nuclear spatial genetic structure of V. americana, at the geographic scale of French Guiana, is better explained by gene flow rather than by historical events.
Keywords: bottleneck; climatic change; extinction-recolonization; microsatellite; neotropical rainforest; pollen and seed dispersal
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Dutech, C., Maggia, L., Tardy, C., Joly, H. I., & Jarne, P. (2003). Tracking a genetic signal of extinction-recolonization events in a neotropical tree species: Vouacapoua americana aublet in french guiana. Evolution, 57(12), 2753–2764.
Abstract: Drier periods from the late Pleistocene and early Holocene have been hypothesized to have caused the disappearance of various rainforest species over large geographical areas in South America and restricted the extant populations to mesic sites. Subsequent improvement in climatic conditions has been associated with recolonization. Changes in population size associated with these extinction-recolonization events should have affected genetic diversity within species. However, these historical hypotheses and their genetic consequences have rarely been tested in South America. Here, we examine the diversity of the chloroplast and nuclear genomes in a Neotropical rainforest tree species, Vouacapoua americana (Leguminosae, Caesalpinioideae) in French Guiana. The chloroplast diversity was analyzed using a polymerase chain reaction-restriction fragment length polymorphism method (six pairs of primers) in 29 populations distributed over most of French Guiana, and a subset of 17 populations was also analyzed at nine polymorphic microsatellite loci. To determine whether this species has experienced extinction-recolonization, we sampled populations in areas supposedly not or only slightly affected by climatic changes, where the populations would not have experienced frequent extinction, and in areas that appear to have been recently recolonized. In the putatively recolonized areas, we found patches of several thousands of hectares homogeneous for chloroplast variation that can be interpreted as the effect of recolonization processes from several geographical origins. In addition, we observed that, for both chloroplast and nuclear genomes, the populations in newly recolonized areas exhibited a significantly smaller allelic richness than others. Controlling for geographic distance, we also detected a significant correlation between chloroplast and nuclear population differentiation. This result indicates a cytonuclear disequilibrium that can be interpreted as a historical signal of a genetic divergence between fragmented populations. In conclusion, the spatial genetic structure of contemporary V. americana populations shows evidence that this species has experienced large extinction-recolonization events, which were possibly caused by past climatic change.
Keywords: allelic richness; caesalpinioideae; chloroplast DNA; climatic changes; cytonuclear disequilibrium; legummosae; microsatellite loci; tropical rainforest
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