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Fouquet, A.; Dubut, V.; Hataway, R.; Scotti-Saintagne, C.; Scotti, I.; Noonan, B. |
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Isolation and characterisation of 19 microsatellite loci from the Amazonian frog Adenomera andreae (Amphibia: Anura: Leptodactylidae) |
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2009 |
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Conservation Genetics Resources |
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Conserv. Genet. Res. |
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1 |
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1 |
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217-220 |
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Biomedicine |
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Nineteen novel microsatellite loci were isolated from Adenomera andreae, a widespread Amazonian frog considered to be a species complex. Three multiplex kits were optimized. Genetic diversity was assessed in 66 individuals sampled in three populations along the West of the Approuague River catchment (French Guiana). We also tested the multiplex kits in four other Adenomera and nine Leptodactylus species with 43.4 and 17.5% success respectively. |
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Springer Netherlands |
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1877-7252 |
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EcoFoG @ eric.marcon @ |
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185 |
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Touchard, A.; Brust, A.; Cardoso, F.C.; Chin, Y.K.-Y.; Herzig, V.; Jin, A.-H.; Dejean, A.; Alewood, P.F.; King, G.F.; Orivel, J.; Escoubas, P. |
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Isolation and characterization of a structurally unique β-hairpin venom peptide from the predatory ant Anochetus emarginatus |
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2016 |
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Biochimica et Biophysica Acta – General Subjects |
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Biochimica et Biophysica Acta – General Subjects |
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1860 |
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11 |
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2553-2562 |
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Anochetus; Ant venom; Disulfide-rich peptides; L-type calcium channels; Neurotoxin; Poneritoxins; U1-PONTX-Ae1a |
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Background Most ant venoms consist predominantly of small linear peptides, although some contain disulfide-linked peptides as minor components. However, in striking contrast to other ant species, some Anochetus venoms are composed primarily of disulfide-rich peptides. In this study, we investigated the venom of the ant Anochetus emarginatus with the aim of exploring these novel disulfide-rich peptides. Methods The venom peptidome was initially investigated using a combination of reversed-phase HPLC and mass spectrometry, then the amino acid sequences of the major peptides were determined using a combination of Edman degradation and de novo MS/MS sequencing. We focused on one of these peptides, U1-PONTX-Ae1a (Ae1a), because of its novel sequence, which we predicted would form a novel 3D fold. Ae1a was chemically synthesized using Fmoc chemistry and its 3D structure was elucidated using NMR spectroscopy. The peptide was then tested for insecticidal activity and its effect on a range of human ion channels. Results Seven peptides named poneritoxins (PONTXs) were isolated and sequenced. The three-dimensional structure of synthetic Ae1a revealed a novel, compact scaffold in which a C-terminal β-hairpin is connected to the N-terminal region via two disulfide bonds. Synthetic Ae1a reversibly paralyzed blowflies and inhibited human L-type voltage-gated calcium channels (CaV1). Conclusions Poneritoxins from Anochetus emarginatus venom are a novel class of toxins that are structurally unique among animal venoms. General significance This study demonstrates that Anochetus ant venoms are a rich source of novel ion channel modulating peptides, some of which might be useful leads for the development of biopesticides. © 2016 |
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VenomeTech, 473 Route des Dolines, Valbonne, France |
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Export Date: 15 September 2016 |
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EcoFoG @ webmaster @ |
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694 |
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Cottet, K.; Fromentin, Y.; Kritsanida, M.; Grougnet, R.; Odonne, G.; Duplais, C.; Michel, S.; Lallemand, M.-C. |
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Isolation of Guttiferones from Renewable Parts of Symphonia globulifera by Centrifugal Partition Chromatography |
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2015 |
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Planta Medica |
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Planta Medica |
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81 |
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17 |
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1604-1608 |
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centrifugal partition chromatography; Clusiaceae; countercurrent chromatography guttiferones; PPAPs; Symphonia globulifera |
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The aim of this study was to investigate the species Symphonia globulifera, a source of polycyclic polyprenylated acyl phloroglucinols such as guttiferone A, which is known to exhibit a variety of biological activities including noticeable antileishmanial properties. Our goal was the identification and the quantification of guttiferone A in different renewable parts of S. globulifera and its preparative isolation. To the best of our knowledge, there is no data concerning its mechanism of action. Consequently, it is particularly interesting to isolate it in gram quantities in order to establish structure activity relationship studies. After performing high-performance liquid chromatography profiles detecting the presence of guttiferone A and proceeding to its quantification, a centrifugal partition chromatography methodology using a two-phase solvent system of cyclohexane/ethyl acetate/methanol/water (20 : 1 : 20 : 1, v/v/v/v) was applied to each extract. In conclusion, a centrifugal partition chromatography system has been developed to ensure a fast, reliable, and scalable way to isolate, with a high level of purity, guttiferone A from five renewable parts of S. globulifera. Moreover, this methodology can be extended to the isolation of other polycyclic polyprenylated acyl phloroglucinols such as guttiferones B, C, and D. © Georg Thieme Verlag KG Stuttgart. |
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Laboratoire des Substances Naturelles Amazoniennes, Institut Pasteur de la Guyane, UMR EcoFoG (Ecologie des forêts de Guyane), Cayenne, France |
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Export Date: 7 January 2016 |
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EcoFoG @ webmaster @ |
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646 |
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Chevolot, M.; Louisanna, E.; Azri, W.; Leblanc-Fournier, N.; Roeckel-Drevet, P.; Scotti-Saintagne, C.; Scotti, I. |
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Isolation of primers for candidate genes for mechano-sensing in five Neotropical tree species |
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2011 |
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Tree Genetics & Genomes |
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Tree Genet. Genomes |
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7 |
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3 |
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655-661 |
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Population genomics; Functional gene; Mechanical signals; Fabaceae |
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Mechanical signals have an impact on plant development. Tropical rainforest trees display large variability for life-history traits related to biomechanics and therefore are a unique study system to better understand biomechanical trait variability from an evolutionary perspective. From sequences and gene expression data available in model species, we developed specific primers for six candidate genes for mechano-sensing in five tropical species. Most of the gene sequences were polymorphic in most species. |
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[Chevolot, Malia; Louisanna, Eliane; Scotti-Saintagne, Caroline; Scotti, Ivan] INRA, Unite Mixte Rech Ecol Forets Guyane, Kourou 97310, French Guiana, Email: ivan.scotti@ecofog.gf |
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Springer Heidelberg |
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1614-2942 |
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ISI:000290571900018 |
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EcoFoG @ webmaster @ |
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315 |
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Craine, J.M.; Elmore, A.J.; Wang, L.; Aranibar, J.; Bauters, M.; Boeckx, P.; Crowley, B.E.; Dawes, M.A.; Delzon, S.; Fajardo, A.; Fang, Y.; Fujiyoshi, L.; Gray, A.; Guerrieri, R.; Gundale, M.J.; Hawke, D.J.; Hietz, P.; Jonard, M.; Kearsley, E.; Kenzo, T.; Makarov, M.; Marañón-Jiménez, S.; McGlynn, T.P.; McNeil, B.E.; Mosher, S.G.; Nelson, D.M.; Peri, P.L.; Roggy, J.C.; Sanders-DeMott, R.; Song, M.; Szpak, P.; Templer, P.H.; Van der Colff, D.; Werner, C.; Xu, X.; Yang, Y.; Yu, G.; Zmudczyńska-Skarbek, K. |
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Isotopic evidence for oligotrophication of terrestrial ecosystems |
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2018 |
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Nature Ecology & Evolution |
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2 |
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11 |
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1735-1744 |
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Human societies depend on an Earth system that operates within a constrained range of nutrient availability, yet the recent trajectory of terrestrial nitrogen (N) availability is uncertain. Examining patterns of foliar N concentrations and isotope ratios (delta15N) from more than 43,000 samples acquired over 37 years, here we show that foliar N concentration declined by 9% and foliar delta15N declined by 0.6–1.6 per thousand. Examining patterns across different climate spaces, foliar delta15N declined across the entire range of mean annual temperature and mean annual precipitation tested. These results suggest declines in N supply relative to plant demand at the global scale. In all, there are now multiple lines of evidence of declining N availability in many unfertilized terrestrial ecosystems, including declines in delta15N of tree rings and leaves from herbarium samples over the past 75–150 years. These patterns are consistent with the proposed consequences of elevated atmospheric carbon dioxide and longer growing seasons. These declines will limit future terrestrial carbon uptake and increase nutritional stress for herbivores. |
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2397-334x |
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EcoFoG @ webmaster @ Craine2018 |
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827 |
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Hérault, B.; Piponiot, C. |
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Key drivers of ecosystem recovery after disturbance in a neotropical forest: Long-term lessons from the Paracou experiment, French Guiana |
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2018 |
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Forest Ecosystems |
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Forest Ecosystems |
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5 |
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2 |
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Amazonia; Carbon fluxes; Climate change; Ecological resilience; Ecosystem modeling; Tropical forests |
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Background: Natural disturbance is a fundamental component of the functioning of tropical rainforests let to natural dynamics, with tree mortality the driving force of forest renewal. With ongoing global (i.e. land-use and climate) changes, tropical forests are currently facing deep and rapid modifications in disturbance regimes that may hamper their recovering capacity so that developing robust predictive model able to predict ecosystem resilience and recovery becomes of primary importance for decision-making: (i) Do regenerating forests recover faster than mature forests given the same level of disturbance? (ii) Is the local topography an important predictor of the post-disturbance forest trajectories? (iii) Is the community functional composition, assessed with community weighted-mean functional traits, a good predictor of carbon stock recovery? (iv) How important is the climate stress (seasonal drought and/or soil water saturation) in shaping the recovery trajectory? Methods: Paracou is a large scale forest disturbance experiment set up in 1984 with nine 6.25 ha plots spanning on a large disturbance gradient where 15 to 60% of the initial forest ecosystem biomass were removed. More than 70,000 trees belonging to ca. 700 tree species have then been censused every 2 years up today. Using this unique dataset, we aim at deciphering the endogenous (forest structure and composition) and exogenous (local environment and climate stress) drivers of ecosystem recovery in time. To do so, we disentangle carbon recovery into demographic processes (recruitment, growth, mortality fluxes) and cohorts (recruited trees, survivors). Results: Variations in the pre-disturbance forest structure or in local environment do not shape significantly the ecosystem recovery rates. Variations in the pre-disturbance forest composition and in the post-disturbance climate significantly change the forest recovery trajectory. Pioneer-rich forests have slower recovery rates than assemblages of late-successional species. Soil water saturation during the wet season strongly impedes ecosystem recovery but not seasonal drought. From a sensitivity analysis, we highlight the pre-disturbance forest composition and the post-disturbance climate conditions as the primary factors controlling the recovery trajectory. Conclusions: Highly-disturbed forests and secondary forests because they are composed of a lot of pioneer species will be less able to cope with new disturbance. In the context of increasing tree mortality due to both (i) severe droughts imputable to climate change and (ii) human-induced perturbations, tropical forest management should focus on reducing disturbances by developing Reduced Impact Logging techniques. |
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Université de la Guyane, UMR EcoFoG (AgroParistech, Cirad, CNRS, Inra, Université des Antilles), Campus Agronomique, Kourou, French Guiana, 97310, France |
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Cited By :1; Export Date: 1 September 2018 |
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EcoFoG @ webmaster @ |
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812 |
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Epelboin, L.; Bourhy, P.; Le Turnier, P.; Schaub, R.; Mosnier, E.; Berlioz-Arthaud, A.; Reynaud, Y.; Nacher, M.; De Thoisy, B.; Carles, G.; Richard-Hansen, C.; Demar, M.; Picardeau, M.; Djossou, F. |
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La leptospirose en Guyane française et sur le bouclier des Guyanes. État des connaissances en 2016 |
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2017 |
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Bulletin de la Société de pathologie exotique |
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110 |
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3 |
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165-179 |
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La leptospirose est une zoonose cosmopolite causée par les bactéries du genre Leptospira. Si sa répartition est vaste sur le globe, le climat chaud et humide de la zone intertropicale est particulièrement propice à son expansion. Dans la plupart des départements et territoires français d’outremer, la leptospirose est considérée comme un problème de santé publique. En Guyane, département français situé au nord-est de la forêt amazonienne, elle est considérée comme rare. L’objectif de cette revue est de faire l’état des lieux des connaissances sur la leptospirose humaine et animale en Guyane française et dans les pays environnants. Une recherche exhaustive a été conduite, à travers la littérature médicale indexée et informelle en français, anglais, espagnol et portugais. Ainsi, respectivement dix et quatre publications ont pu être identifiées sur la leptospirose humaine et animale en Guyane, publiées entre 1940 et 1995, sous formes de cas cliniques ou de séries de cas. Les publications concernant cette maladie dans les autres pays du plateau des Guyanes, Venezuela oriental, Guyana, Suriname, et État brésilien de l’Amapá, étaient également rares voire inexistantes. En revanche, les données récentes du centre national de la leptospirose français ont montré une augmentation récente et brutale du nombre de cas dans le département, probablement en partie due à la mise en place d’outils diagnostiques tels que la sérologie IgM Elisa. Il est en fait probable que la leptospirose soit une maladie négligée dans la région, du fait de l’absence d’outils diagnostiques rapidement disponibles, de la méconnaissance des cliniciens de cette pathologie et de l’existence de nombreux autres pathogènes à présentation clinique similaire (paludisme, arboviroses, fièvre Q, toxoplasmose amazonienne). La mise en place d’études de plus grande ampleur sur la leptospirose animale et humaine est nécessaire et urgente pour connaître le véritable poids de cette maladie dans notre région. |
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1961-9049 |
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EcoFoG @ webmaster @ Epelboin2017 |
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Salas-Lopez, A.; Violle, C.; Mallia, L.; Orivel, J. |
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Land-use change effects on the taxonomic and morphological trait composition of ant communities in French Guiana |
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2018 |
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Insect Conservation and Diversity |
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Insect Conserv Divers |
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11 |
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2 |
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162-173 |
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Community assembly; Formicidae; functional diversity; gradient analysis; habitat filtering; land-use intensification; n-dimensional hypervolume approach |
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Abstract Land-use changes frequently lead to major changes in the composition and diversity of organisms. A reduction in the range of strategies enabling organisms to survive in a given environment and changes in the average trait values of species may potentially be associated with variations in species? number and identity. We investigated the variation in ant taxonomic composition and morphological trait diversity along a land-use gradient in French Guiana. We measured 13 core ant morphological traits on all species sampled. We then selected the set of five traits that best captured changes along the land-use gradient. Potential effects of the variation in morphological trait diversity and average values were evaluated by examining morphological traits individually as well as in combination. We found that variation in taxonomic diversity was unrelated to the plot-level morphospace. Conversely, a significant shift in taxonomic composition was accompanied by changes in the average values of community traits along the studied gradient, examined both individually and in combination. We argue that morphological trait values may be related to the success of different species in surviving in a given environment and, therefore, are indicative of the taxonomic turnover in ants along the land-use gradient. Nevertheless, in contradiction with theoretical expectations, the morphospace is only slightly affected by habitat filtering and loosely impacted by taxonomic changes. Examining the sensitivity of the morphospace to abiotic and biotic factors and how it reflects varying ecological pressures for species is thus of the utmost importance. |
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John Wiley & Sons, Ltd (10.1111) |
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1752-458x |
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doi: 10.1111/icad.12248 |
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892 |
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Richard-Hansen, C.; Jaouen, G.; Denis, T.; Brunaux, O.; Marcon, E.; Guitet, S. |
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Landscape patterns influence communities of medium-to large-bodied vertebrates in undisturbed terra firme forests of French Guiana |
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2015 |
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Journal of Tropical Ecology |
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Journal of Tropical Ecology |
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31 |
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5 |
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423-436 |
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Animal communities; diversity; environmental heterogeneity; French Guiana; landscape ecology; species-habitat association |
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Whereas broad-scale Amazonian forest types have been shown to influence the structure of the communities of medium-to large-bodied vertebrates, their natural heterogeneity at smaller scale or within the terra firme forests remains poorly described and understood. Diversity indices of such communities and the relative abundance of the 21 most commonly observed species were compared from standardized line-transect data across 25 study sites distributed in undisturbed forests in French Guiana. We first assessed the relevance of a forest typology based on geomorphological landscapes to explain the observed heterogeneity. As previously found for tree beta-diversity patterns, this new typology proved to be a non-negligible factor underlying the beta diversity of the communities of medium-to large bodied vertebrates in French Guianan terra firme forests. Although the species studied are almost ubiquitous across the region, they exhibited habitat preferences through significant variation in abundance and in their association index with the different landscape types. As terra firme forests represent more than 90% of the Amazon basin, characterizing their heterogeneity-including faunal communities-is a major challenge in neotropical forest ecology. © 2015 Cambridge University Press. |
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ONCFS, EcoFoG, Kourou Cedex, France |
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Export Date: 16 November 2015 |
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Ziegler, C.; Coste, S.; Stahl, C.; Delzon, S.; Levionnois, S.; Cazal, J.; Cochard, H.; Esquivel-Muelbert, A.; Goret, J.-Y.; Heuret, P.; Jaouen, G.; Santiago, L.S.; Bonal, D. |
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Large hydraulic safety margins protect Neotropical canopy rainforest tree species against hydraulic failure during drought |
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2019 |
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Annals of Forest Science |
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Ann. Forest Sci. |
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76 |
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4 |
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115 |
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Amazon rainforest; Embolism resistance; Hydraulic safety margins; Turgor loss point; Water potential |
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Key message: Abundant Neotropical canopy-tree species are more resistant to drought-induced branch embolism than what is currently admitted. Large hydraulic safety margins protect them from hydraulic failure under actual drought conditions. Context: Xylem vulnerability to embolism, which is associated to survival under extreme drought conditions, is being increasingly studied in the tropics, but data on the risk of hydraulic failure for lowland Neotropical rainforest canopy-tree species, thought to be highly vulnerable, are lacking. Aims: The purpose of this study was to gain more knowledge on species drought-resistance characteristics in branches and leaves and the risk of hydraulic failure of abundant rainforest canopy-tree species during the dry season. Methods: We first assessed the range of branch xylem vulnerability to embolism using the flow-centrifuge technique on 1-m-long sun-exposed branches and evaluated hydraulic safety margins with leaf turgor loss point and midday water potential during normal- and severe-intensity dry seasons for a large set of Amazonian rainforest canopy-tree species. Results: Tree species exhibited a broad range of embolism resistance, with the pressure threshold inducing 50% loss of branch hydraulic conductivity varying from − 1.86 to − 7.63 MPa. Conversely, we found low variability in leaf turgor loss point and dry season midday leaf water potential, and mostly large, positive hydraulic safety margins. Conclusions: Rainforest canopy-tree species growing under elevated mean annual precipitation can have high resistance to embolism and are more resistant than what was previously thought. Thanks to early leaf turgor loss and high embolism resistance, most species have a low risk of hydraulic failure and are well able to withstand normal and even severe dry seasons. © 2019, The Author(s). |
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Smithsonian Tropical Research Institute, Balboa, Ancon, Panama |
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Springer |
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12864560 (Issn) |
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EcoFoG @ webmaster @ |
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901 |
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