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Baraloto, C.; Goldberg, D.E. |
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Title  |
Microhabitat associations and seedling bank dynamics in a neotropical forest |
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Journal Article |
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Year |
2004 |
Publication |
Oecologia |
Abbreviated Journal |
Oecologia |
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141 |
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4 |
Pages |
701-712 |
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French Guiana; life history traits; light availability; regeneration niche; soil nutrients |
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We conducted a rigorous test of tropical tree seedling microhabitat differentiation by examining microhabitat associations, survival and growth of established seedlings of ten tropical tree species representing a four-factor gradient in seed size. Eight microhabitat variables describing soil and light conditions were measured directly adjacent to each of 588 seedlings within twelve 10 x 100 m belt transects at Paracou, French Guiana, and at 264 reference points along the transects. From these measurements, we defined three principal components describing soil richness, soil softness and canopy openness. Six of ten species ( in 9 of 30 total cases) were distributed non-randomly with respect to microhabitat along at least one principal component. However, few species demonstrated clear microhabitat specialization. All shifts in distribution relative to reference points were in the same direction ( richer, softer soil). Furthermore, of 135 pairwise comparisons among the species, only 7 were significantly different. More than three-fourths of all seedlings (75.3%) survived over the 2-year monitoring period, but survival rates varied widely among species. In no case was the probability of survival influenced by any microhabitat parameter. Relative height growth rates for the seedlings over 2 years varied from – 0.031 cm cm(-1) year(-1) (Dicorynia guianensis, Caesalpiniaceae) to 0.088 cm cm(-1) year(-1) (Virola michelii, Myristicaceae). In only 4 of 30 cases was height growth significantly associated with one of the three principal components. Because the conditions in this study were designed to maximize the chance of finding microhabitat differentiation among a group of species differing greatly in life history traits, the lack of microhabitat specialization it uncovered suggests that microhabitat partitioning among tropical tree species at the established seedling stage is unlikely to contribute greatly to coexistence among these species. |
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INRA Kourou, UMR Ecol Forets Guyane, Kourou 97387, French Guiana, Email: baraloto.c@kourou.cirad.fr |
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SPRINGER |
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0029-8549 |
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ISI:000224999800015 |
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EcoFoG @ eric.marcon @ |
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233 |
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Tysklind, N.; Etienne, M.-P.; Scotti-Saintagne, C.; Tinaut, A.; Casalis, M.; Troispoux, V.; Cazal, S.-O.; Brousseau, L.; Ferry, B.; Scotti, I. |
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Title |
Microgeographic local adaptation and ecotype distributions: The role of selective processes on early life-history traits in sympatric, ecologically divergent Symphonia populations |
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Journal Article |
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2020 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecology and Evolution |
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10 |
Issue |
19 |
Pages |
10735-10753 |
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Keywords |
determinants of plant community diversity and structure; evolutionary ecology; landscape ecology; local adaptation; Neotropical forest; plant development and life-history traits; reciprocal transplantation experiments; Symphonia |
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Trees are characterized by the large number of seeds they produce. Although most of those seeds will never germinate, plenty will. Of those which germinate, many die young, and eventually, only a minute fraction will grow to adult stage and reproduce. Is this just a random process? Do variations in germination and survival at very young stages rely on variations in adaptations to microgeographic heterogeneity? and do these processes matter at all in determining tree species distribution and abundance?. We have studied these questions with the Neotropical Symphonia tree species. In the Guiana shield, Symphonia are represented by at least two sympatric taxa or ecotypes, Symphonia globulifera found almost exclusively in bottomlands, and a yet undescribed more generalist taxon/ecotype, Symphonia sp1. A reciprocal transplantation experiment (510 seeds, 16 conditions) was set up and followed over the course of 6 years to evaluate the survival and performance of individuals from different ecotypes and provenances. Germination, survival, growth, and herbivory showed signs of local adaptation, with some combinations of ecotypes and provenances growing faster and surviving better in their own habitat or provenance region. S. globulifera was strongly penalized when planted outside its home habitat but showed the fastest growth rates when planted in its home habitat, suggesting it is a specialist of a high-risk high-gain strategy. Conversely, S. sp1 behaved as a generalist, performing well in a variety of environments. The differential performance of seeds and seedlings in the different habitats matches the known distribution of both ecotypes, indicating that environmental filtering at the very early stages can be a key determinant of tree species distributions, even at the microgeographic level and among very closely related taxa. Furthermore, such differential performance also contributes to explain, in part, the maintenance of the different Symphonia ecotypes living in intimate sympatry despite occasional gene flow. © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd |
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UMR AMAP, IRD, Cirad, CNRS, INRAE, Université Montpellier, Montpellier, France |
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John Wiley and Sons Ltd |
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20457758 (Issn) |
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EcoFoG @ webmaster @ |
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951 |
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Schimann, H.; Petit-Jean, C.; Guitet, S.; Reis, T.; Domenach, A.M.; Roggy, J.-C. |
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Title |
Microbial bioindicators of soil functioning after disturbance: The case of gold mining in tropical rainforests of French Guiana |
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Journal Article |
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Year |
2012 |
Publication |
Ecological Indicators |
Abbreviated Journal |
Ecol. Indic. |
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20 |
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34-41 |
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Keywords |
Bioindicators; DEA/SIR ratio; Denitrifying Enzyme Activity (DEA); Disturbance; Substrate Induced Respiration (SIR); Tropical rainforest |
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In the context of an ongoing monitoring study on the impacts of gold-mining activities on critical ecosystem processes, we explored the use of soil Denitrifying Enzyme Activity (DEA) and Substrate Induced Respiration (SIR) as ecosystem indicators in tropical rainforests of French Guiana. We also propose DEA/SIR ratio as ecosystem attribute able to describe the state of an ecosystem and to reflect changes in ecological processes. With this purpose, we measured SIR, DEA and DEA/SIR ratio in five gold-mining areas and five surrounding natural reference rainforests. We also measured indicators in two conditions of spontaneous regeneration of vegetation (stratified or not) and two conditions of soil rehabilitation (prior preparation of soils or not). We showed a high variability of DEA, SIR and DEA/SIR ratio in the natural reference forests. This pointed out the necessity to identify relevant reference systems – i.e. proving a close match in all relevant ecological dimensions – to compare with closed perturbed systems in order to assess the levels of alterations after disturbances. Results showed a high impact of gold mine on microbial processes with a strong decrease of DEA (10-fold lower), SIR (2-fold lower) and DEA/SIR ratio (8-fold lower) in perturbed areas in comparison with natural reference forests. The type of spontaneous vegetation (stratified or not) influenced the values of indicators as well as prior rehabilitation of soils, demonstrating the capacity of DEA, SIR and DEA/SIR ratio to respond in proportion to the perturbation (robustness) and to the different levels of restoration (sensitivity). The systematic decrease of the ratio DEA/SIR observed in the studied perturbed situations demonstrates clearly that the structure of microbial communities has been also modified. The ratio DEA/SIR proved to be robust and sensitive, and able to describe in fairly fine way changes of soil microbial communities in terms of structure and function in gold mine areas and during processes of restoration. We propose to use DEA, SIR and DEA/SIR ratio as bioindicators of both structural and functional aspects of C and N cycling in soils. Together with others bioindicators based on key supporting functions in soils, these indicators should accurately evaluate the ecological potential of natural ecosystems and the levels of degradation in case of land-use changes. © 2012 Elsevier Ltd. |
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SOLICAZ – Campus Agronomique, BP 76, 97389 Kourou Cedex, France |
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1470160x (Issn) |
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Export Date: 2 May 2012; Source: Scopus; doi: 10.1016/j.ecolind.2012.01.021; Language of Original Document: English; Correspondence Address: Schimann, H.; INRA-Joint Research Unit Ecology of Guiana Forests (Ecofog), Campus Agronomique, BP 709, 97387 Kourou Cedex, France; email: heidy.schimann@ecofog.gf |
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EcoFoG @ webmaster @ |
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396 |
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Vastra, M.; Salvin, P.; Roos, C. |
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Title |
MIC of carbon steel in Amazonian environment: Electrochemical, biological and surface analyses |
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Journal Article |
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2016 |
Publication |
International Biodeterioration and Biodegradation |
Abbreviated Journal |
International Biodeterioration and Biodegradation |
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112 |
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98-107 |
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Biology; Electrochemistry; Mic; Short term; Surface analyses |
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In this study, the corrosion of S355 carbon steel was monitored for 50 days in equatorial environment. The experiments were conducted under three complementary approaches in a natural environment: (i) bacterial diversity was assessed with Miseq sequencing, (ii) observations of the surface and identifications of deposit compounds were realised with scanning electron microscopy (SEM), Raman spectrometry and EDX analyses, (iii) electrochemical measurements were used to calculate corrosion rate and to identify the phenomena which control corrosion. The results showed that the bacterial population had changed over immersion time from a dominance of β-proteobacteria to α-proteobacteria. This evolution decreased charge transfer resistance at the metal/deposit from 41.6 to 20.8 Ω/cm2 in 50 days, caused an increase in the corrosion rate by a factor of 2, from 0.13 to 0.27 mm/year. Surface analyses showed a progressive appearance of MIC markers in the deposit such as iron sulphide and manganese oxides that were detected after 30 days of immersion in the natural environment. In conclusion, this study describes in detail, the first stage of MIC activity on carbon steel surface in an equatorial brackish water, under aerobic conditions. © 2016 Elsevier Ltd. |
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Laboratoire des Matériaux et Molécules en Milieu Agressif, Université des Antilles, UMR ECOFOG, Campus Universitaire, Schœlcher, Martinique |
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Export Date: 1 June 2016 |
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EcoFoG @ webmaster @ |
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681 |
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Chang, S.-S.; Quignard, F.; Alméras, T.; Clair, B. |
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Mesoporosity changes from cambium to mature tension wood: A new step toward the understanding of maturation stress generation in trees |
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Journal Article |
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2015 |
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New Phytologist |
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New Phytologist |
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205 |
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3 |
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1277-1287 |
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Keywords |
Cell wall maturation; Maturation stress; Mesoporosity; Poplar (Populus deltoides × P. nigra); Tension wood |
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In order to progress in the understanding of mechanical stress generation, the mesoporosity of the cell wall and its changes during maturation of poplar (Populus deltoides × P. nigra) tension wood (TW) and opposite wood (OW) were measured by nitrogen adsorption-desorption. Variations in the thickness of the gelatinous layer (G-layer) were also measured to clarify whether the mesoporosity change simultaneously with the deposition of the G-layer in TW. Results show that mesoporous structures of TW and OW were very similar in early development stages before the deposition of G-layers. With the formation of the S2 layer in OW and the G-layer in TW, the mesopore volume decreased steeply before lignification. However, in TW only, the decrease in mesopore volume occurred together with the pore shape change and a progressive increase in pore size. The different patterns observed in TW revealed that pores from G-layers appear with a different shape compared to those of the compound middle lamella, and their size increases during the maturation process until stabilising in mature wood. This observation strongly supports the hypothesis of the swelling of the G-layer matrix during maturation as the origin of maturation stress in poplar tension wood. |
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CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), Campus Agronomique, BP 701Kourou, France |
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Export Date: 28 January 2015 |
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EcoFoG @ webmaster @ |
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581 |
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Chang, S.S.; Clair, B.; Ruelle, J.; Beauchene, J.; Di Renzo, F.; Quignard, F.; Zhao, G.J.; Yamamoto, H.; Gril, J. |
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Mesoporosity as a new parameter for understanding tension stress generation in trees |
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Journal Article |
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2009 |
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Journal of Experimental Botany |
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J. Exp. Bot. |
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60 |
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11 |
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3023-3030 |
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Growth stress; hydrogel; mesoporosity; tension wood |
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The mechanism for tree orientation in angiosperms is based on the production of high tensile stress on the upper side of the inclined axis. In many species, the stress level is strongly related to the presence of a peculiar layer, called the G-layer, in the fibre cell wall. The structure of the G-layer has recently been described as a hydrogel thanks to N-2 adsorption-desorption isotherms of supercritically dried samples showing a high mesoporosity (pores size from 2-50 nm). This led us to revisit the concept of the G-layer that had been, until now, only described from anatomical observation. Adsorption isotherms of both normal wood and tension wood have been measured on six tropical species. Measurements show that mesoporosity is high in tension wood with a typical thick G-layer while it is much less with a thinner G-layer, sometimes no more than normal wood. The mesoporosity of tension wood species without a G-layer is as low as in normal wood. Not depending on the amount of pores, the pore size distribution is always centred around 6-12 nm. These results suggest that, among species producing fibres with a G-layer, large structural differences of the G-layer exist between species. |
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[Chang, Shan-Shan; Clair, Bruno; Gril, Joseph] Univ Montpellier 2, LMGC, CNRS, F-34095 Montpellier 5, France, Email: clair@lmgc.univ-montp2.fr |
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OXFORD UNIV PRESS |
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0022-0957 |
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ISI:000268588300008 |
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EcoFoG @ eric.marcon @ |
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107 |
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Melieres, M.A.; Pourchet, M.; Charles-Dominique, P.; Gaucher, P. |
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Mercury in canopy leaves of French Guiana in remote areas |
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Journal Article |
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2003 |
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Science of the Total Environment |
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Sci. Total Environ. |
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311 |
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1-3 |
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261-267 |
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mercury; canopy; rainforest; Hg atmosphere soil transfer |
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A study of total Hg concentration in the foliage of the canopy was carried out in two remote areas in French Guiana. The sampled canopy is representative of the French Guiana canopy. The concentration in the foliage, 64+/-14 ng g(-1) (dry wt.), is used to estimate the annual input of total Hg to the soil through the litterfall, found to be 45+/-10 mug m(-2) y(-1). As translocation is negligible, mercury in the canopy originates mainly from atmospheric uptake by the leaves and this litterfall deposit represents a direct atmospheric input from the background atmospheric load into the soil. (C) 2003 Elsevier Science B.V. All rights reserved. |
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Univ Grenoble 1, CNRS, Lab Glaciol & Geophys Environm, F-38402 St Martin Dheres, France, Email: melieres@glaciog.ujf-grenobic.fr |
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ELSEVIER SCIENCE BV |
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0048-9697 |
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ISI:000184091300019 |
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EcoFoG @ eric.marcon @ |
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271 |
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Mony, R.; Dejean, A.; Bilong, C.F.B.; Kenne, M.; Rouland-Lefèvre, C. |
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Melissotarsus ants are likely able to digest plant polysaccharides |
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Journal Article |
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2013 |
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Comptes Rendus – Biologies |
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C. R. Biol. |
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336 |
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10 |
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500-504 |
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Ant-plant interactions; Degradation of plant material; Enzymatic activity; Melissotarsus ants |
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Melissotarsus ants have an extremely specialized set of behaviours. Both workers and gynes tunnel galleries in their host tree bark. Workers walk with their mesothoracic legs pointing upwards and tend Diaspididae hemiptera for their flesh. The ants use their forelegs to plug the galleries with silk that they secrete themselves. We hypothesised that the ants' energetic needs for nearly constant gallery digging could be satisfied through the absorption of host tree tissues; so, using basic techniques, we examined the digestive capacities of workers from two species. We show that workers are able to degrade oligosaccharides and heterosides as well as, to a lesser degree, polysaccharides. This is one of the rare reports on ants able to digest plant polysaccharides other than starch. © 2013 Académie des sciences. |
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IRD, UMR BIOEMCO-IBIOS, 32, rue Henri-Varagnat, 93143 Bondy cedex, France |
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16310691 (Issn) |
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Export Date: 6 December 2013; Source: Scopus; Coden: Crboc; doi: 10.1016/j.crvi.2013.08.003; Language of Original Document: English; Correspondence Address: Dejean, A.; Université de Toulouse, UPS, Ecolab, 118, route de Narbonne, 31062 Toulouse, France; email: alain.dejean@wanadoo.fr; References: Hölldobler, B., Wilson, E.O., (1990) The Ants, , Harvard University Press Cambridge, MA, USA 730 p; Duchesne, L.C., Larson, D.W., Cellulose and the evolution of plant life (1989) BioScience, 39, pp. 238-241; Watanabe, H., Tokuda, G., Cellulolytic Systems in Insects (2010) Annu. Rev. Entomol., 55, pp. 609-632; Wenzel, M., Schonig, I., Berchtold, M., Kampfer, P., König, K., Aerobic and facultatively anaerobic cellulolytic bacteria from the gut of the Termite Zootermopsis angusticollis (2002) J. Appl. Microbiol., 92, pp. 32-40; Brune, A., Microbial symbioses in the digestive tract of lower termites (2011) Beneficial Microorganisms in Multicellular Life Forms, pp. 3-25. , E. Rosenberg, U. Gophna, Heidelberg Springer; Tokuda, G., Watanabe, H., Hidden cellulases in termites: Revision of an old hypothesis (2007) Biol. Lett., 3, pp. 336-339; Nobre, T., Aanen, D.K., Fungiculture or termite husbandry? The ruminant hypothesis (2012) Insects, 3, pp. 307-323; Zientz, E., Feldhaar, H., Stoll, S., Gross, R., Insights into the microbial world associated with ants (2005) Arch. Microbiol., 184, pp. 199-206; Aylward, F., Burnum, K.E., Scott, J.J., Suen, G., Tringe, S.G., Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens (2012) ISME J., pp. 1-14; Cook, S.C., Davidson, D.W., Nutritional and functional biology of exudate-feeding ants (2006) Entomol. Exp. Appl., 118, pp. 1-10; He, H., Chen, Y., Zhang, Y., Wei, C., Bacteria associated with gut lumen of Camponotus japonicus Mayr (2011) Environ. Entomol., 40, pp. 1405-1409; Blochmann, F., Über das Vorkommen von bakterienähnlichen Gebilden in den Geweben und Eiern verschiedener Insekten (1892) Zentbl. Bakteriol., 11, pp. 234-240; Feldhaar, H., Straka, J., Krischke, M., Berthold, K., Stoll, S., Nutritional upgrading for omnivorous carpenter ants by the endosymbiont Blochmannia (2007) BMC Biol., 5, p. 48; De Souza, D.J., Bézier, A., Depoix, D., Drezen, J.M., Lenoir, A., Blochmannia endosymbionts improve colony growth and immune defence in the ant Camponotus fellah (2009) BMC Microbiol., 9, p. 29; Van Borm, S., Buschinger, A., Boomsma, J.J., Billen, J., Tetraponera ants have gut symbionts related to nitrogen-fixing root-nodule bacteria (2002) Proc. R. Soc. Lond. B., 269, pp. 2023-2027; Eilmus, S., Heil, M., Bacterial associates of arboreal ants and their putative functions in an obligate ant-plant mutualism (2009) Appl. Env. 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Rey, O.; Loiseau, A.; Facon, B.; Foucaud, J.; Orivel, J.; Cornuet, J.M.; Robert, S.; Dobigny, G.; Delabie, J.H.C.; Mariano, C.D.F.; Estoup, A. |
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Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers |
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2011 |
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Molecular Biology and Evolution |
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Mol. Biol. Evol. |
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28 |
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9 |
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2591-2601 |
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Keywords |
parthenogenesis; thelytoky; recombination; inbreeding; biological invasion; Wasmannia auropunctata |
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The little fire ant, Wasmannia auropunctata, displays a peculiar breeding system polymorphism. Classical haplo-diploid sexual reproduction between reproductive individuals occurs in some populations, whereas, in others, queens and males reproduce clonally. Workers are produced sexually and are sterile in both clonal and sexual populations. The evolutionary fate of the clonal lineages depends strongly on the underlying mechanisms allowing reproductive individuals to transmit their genomes to subsequent generations. We used several queen-offspring data sets to estimate the rate of transition from heterozygosity to homozygosity associated with recombination events at 33 microsatellite loci in thelytokous parthenogenetic queen lineages and compared these rates with theoretical expectations under various parthenogenesis mechanisms. We then used sexually produced worker families to define linkage groups for these 33 loci and to compare meiotic recombination rates in sexual and parthenogenetic queens. Our results demonstrate that queens from clonal populations reproduce by automictic parthenogenesis with central fusion. These same parthenogenetic queens produce normally segregating meiotic oocytes for workers, which display much lower rates of recombination (by a factor of 45) than workers produced by sexual queens. These low recombination rates also concern the parthenogenetic production of queen offspring, as indicated by the very low rates of transition from heterozygosity to homozygosity observed (from 0% to 2.8%). We suggest that the combination of automixis with central fusion and a major decrease in recombination rates allows clonal queens to benefit from thelytoky while avoiding the potential inbreeding depression resulting from the loss of heterozygosity during automixis. In sterile workers, the strong decrease of recombination rates may also facilitate the conservation over time of some coadapted allelic interactions within chromosomes that might confer an adaptive advantage in habitats disturbed by human activity, where clonal populations of W. auropunctata are mostly found. |
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[Rey, O; Loiseau, A; Facon, B; Foucaud, J; Cornuet, JM; Robert, S; Dobigny, G] INRA, UMR Ctr Biol Gest Populat INRA IRD CIRAD Montpe, Montferrier Sur Lez, France, Email: olivier.rey@supagro.inra.fr |
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Oxford Univ Press |
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0737-4038 |
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WOS:000294552700019 |
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Odonne, G.; Valadeau, C.; Alban-Castillo, J.; Stien, D.; Sauvain, M.; Bourdy, G. |
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Title |
Medical ethnobotany of the Chayahuita of the Paranapura basin (Peruvian Amazon) |
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Journal Article |
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2013 |
Publication |
Journal of Ethnopharmacology |
Abbreviated Journal |
J. Ethnopharmacol. |
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Volume |
146 |
Issue |
1 |
Pages |
127-153 |
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Amazon; Chayahuita; Medicinal plant; Peru; Pharmacopeia; Traditional medicine |
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Abstract |
Ethnopharmacological relevance: Up until now, the plant pharmacopoeia of the Chayahuita, an ethnic group from the Peruvian Amazon, has been poorly defined. This paper details the uses of medicinal plants within this community, as recorded in two villages of the Paranapura basin, Soledad and Atahualpa de Conchiyacu. This study aimed to describe the basis of the Chayahuita traditional medical system, to document part of the medicinal plant corpus, and to compare it with data from other Amazonian ethnic groups. Material and methods: Methodology was based (i) on field prospection with 26 informants (ethnobotanical walks methodology), (ii) semi-structured interviews including 93 people (49 men and 44 women) focused on the most recent health problem experienced and on the therapeutic options chosen, (iii) individual or group thematic discussions relating to disease and treatments, (iv) 6-months of participants' observations between May 2007 and May 2008. At the end of the project in May 2008 a workshop was organized to cross-check the data with the help of 12 of the most interested informants. Results: Six hundred and seventeen voucher specimens were collected, corresponding to 303 different species, from which 274 (belonging to 83 families) are documented here. Altogether 492 recipes were recorded, corresponding to a global figure of 541 therapeutic uses and a total of 664 use reports. The main therapeutic uses are related to dermatological problems (103 uses; 19%), gastro-intestinal complaints (69 uses; 13%) and malaria/fevers (52 uses; 10%). Diseases are analysed according to Chayahuita concepts, and for each disease the species having a high frequency of citation are listed, and the most frequently used remedies are described. Whenever possible, comparisons with other Amazonian groups have been drawn. Conclusion: Chayahuita nosology and medical ethnobotany appear to draw their inspiration from a common panamazonian root. Despite the fact that a certain number of medicinal plants are shared with other nearby groups, there seem to be specific uses for some species, thus highlighting the originality of the Chayahuita pharmacopoeia. Presently there is a certain disinterest in the most traditional area of the Chayahuita medical ways, and the role of the penutu (shaman) seems to be less highly-valued than in the past. Nonetheless, the use of medicinal plants in phytotherapeutic treatment is very much a living, shared knowledge. © 2012 Elsevier Ireland Ltd. All rights reserved. |
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Université de Toulouse, Université Paul Sabatier, Faculté de Pharmacie, 35 Chemin des maraîchers, F-31062, Toulouse Cedex 9, France |
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03788741 (Issn) |
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Export Date: 6 March 2013; Source: Scopus; Coden: Joetd; doi: 10.1016/j.jep.2012.12.014; Language of Original Document: English; Correspondence Address: Odonne, G.; CNRS Guyane, USR 3456, 2 av. Gustave Charlery, 97300 Cayenne, France; email: guillaume.odonne@gmail.com |
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