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Ghislain, B.; Nicolini, E.-A.; Romain, R.; Ruelle, J.; Yoshinaga, A.; Alford, M.H.; Clair, B. |
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Title  |
Multilayered structure of tension wood cell walls in Salicaceae sensu lato and its taxonomic significance |
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Journal Article |
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2016 |
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Botanical Journal of the Linnean Society |
Abbreviated Journal |
Bot. J. Linn. Soc. |
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182 |
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4 |
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744-756 |
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Flacourtiaceae; G-layer; multilayered tension wood; reaction wood |
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Salicaceae have been enlarged to include a majority of the species formerly placed in the polyphyletic tropical Flacourtiaceae. Several studies have reported a peculiar and infrequently formed multilayered structure of tension wood in four of the tropical genera. Tension wood is a tissue produced by trees to restore their vertical orientation and most studies have focused on trees developing tension wood by means of cellulose-rich, gelatinous fibres, as in Populus and Salix (Salicaceae s.s.). This study aims to determine if the multilayered structure of tension wood is an anatomical characteristic common in other Salicaceae and, if so, how its distribution correlates to phylogenetic relationships. Therefore, we studied the tension wood of 14 genera of Salicaceae and two genera of Achariaceae, one genus of Goupiaceae and one genus of Lacistemataceae, families closely related to Salicaceae or formerly placed in Flacourtiaceae. Opposite wood and tension wood were compared with light microscopy and three-dimensional laser scanning confocal microscopy. The results indicate that a multilayered structure of tension wood is common in the family except in Salix, Populus and one of their closest relatives, Idesia polycarpa. We suggest that tension wood may be a useful anatomical character in understanding phylogenetic relationships in Salicaceae. Further investigation is still needed on the tension wood of several other putatively close relatives of Salix and Populus, in particular Bennettiodendron, Macrohasseltia and Itoa. |
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1095-8339 |
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EcoFoG @ webmaster @ |
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718 |
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Poorter, Laurens ; Craven, Dylan ; Jakovac, Catarina C. ; van der Sande, Masha T. ; Amissah, Lucy ; Bongers, Frans ; Chazdon, Robin ; Farrioir, Caroline E. ; Kambach, Stephan ; Meave, Jorge A. ; Munoz, Rodrigo ; Norden, Natalia ; Ruger, Nadja ; van Breugel, Michiel ; et all ...... |
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Multidimensional tropical forest recovery |
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Journal Article |
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2021 |
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Science |
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374 |
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6573 |
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1370-1376 |
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Tropical forests disappear rapidly because of deforestation, yet they have the potential to regrow naturally on abandoned lands. We analyze how 12 forest attributes recover during secondary succession and how their recovery is interrelated using 77 sites across the tropics. Tropical forests are highly resilient to low-intensity land use; after 20 years, forest attributes attain 78% (33 to 100%) of their old-growth values. Recovery to 90% of old-growth values is fastest for soil (<1 decade) and plant functioning (<2.5 decades), intermediate for structure and species diversity (2.5 to 6 decades), and slowest for biomass and species composition (>12 decades). Network analysis shows three independent clusters of attribute recovery, related to structure, species diversity, and species composition. Secondary forests should be embraced as a low-cost, natural solution for ecosystem restoration, climate change mitigation, and biodiversity conservation. |
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American association for the advancement of science |
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1039 |
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Donald, Julian ; Murienne, Jérôme ; Chave, Jérome ; Iribar, Amaia ; Louisanna, Eliane ; Manzi, Sophie ; Roy, Melanie ; Tao, Shengli ; Orivel, Jérome ; Schimann, Heidy; Zinger, Lucie |
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Multi-taxa environmental DNA inventories reveal distinct taxonomic and functional diversity in urban tropical forest fragments |
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Journal Article |
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2021 |
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Global Ecology and Conservation |
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29 |
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e01724 |
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Urban expansion and associated habitat transformation drives shifts in biodiversity, with declines in taxonomic and functional diversity. Forests fragments within urban landscapes offer a number of ecosystem services, and help to maintain biodiversity and ecosystem functions. Here, we focus on a tropical forest environment, and on the soil biota. Using eDNA metabarcoding, we compare forest fragments within the city of Cayenne, French Guiana, with a neighbouring continuous undisturbed forest. We wished to determine if urban forest fragments conserve high levels of alpha and beta diversity as well as similar functional composition for plants, soil animals, fungi and bacteria. We found that alpha diversity is similar across habitats for plants and fungi, lower in urban forests for metazoans and higher for bacteria. We also found that urban forests communities differ from undisturbed forests in their taxonomic composition, with urban forests exhibiting greater turnover between fragments potentially caused by ecological drift and limited dispersal. However, their functional composition exhibited limited differences, with an enrichment of palms, arbuscular mycorrhizal fungi and bacteria and a depletion of climber plants and termites. Thus, although urban forest fragments do shelter soil biodiversity that differs from native forests, the losses of soil functions may be relatively limited. This study demonstrates the strong potential of a multi-taxa eDNA approach for rapid inventories across taxonomic kingdoms, in particular for cryptic soil diversity. It also demonstrates the key role of urban forest fragments in conserving biodiversity and ecosystem function, and points to a need for more systematic monitoring of these areas in urban management plans. |
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EcoFoG @ webmaster @ |
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1025 |
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Leroy, C.; Gueroult, M.; Wahyuni, N.S.; Escoute, J.; Cereghino, R.; Sabatier, S.; Auclair, D. |
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Morphogenetic trends in the morphological, optical and biochemical features of phyllodes in Acacia mangium Willd (Mimosaceae) |
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Journal Article |
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2009 |
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Trees-Structure and Function |
Abbreviated Journal |
Trees-Struct. Funct. |
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23 |
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1 |
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37-49 |
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Chlorophyll; Phyllode morphology; Phyllode anatomy; Nitrogen; Optical properties; Plant architecture |
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Endogenous variations in the annual growth of trees suggest that similar trends would occur in phyllodes. In comparison to leaves, the characteristics of phyllodes are less well known, hence this study examines the effects of architectural position and age of tree on the phyllodes of Acacia mangium. Phyllodes were investigated on 1-, 2-, and 3-year-old trees from three axis positions within the crown. We focused on the morphological, optical and biochemical traits of the phyllodes. The increase in phyllode area and lamina thickness is more pronounced in the older trees. Leaf mass area (LMA), stomatal density, nitrogen and chlorophyll content increase with tree age. The values of these characteristics decrease from the main stem to the lower branches for the older trees. Phyllode light absorptance increased with tree age whereas reflectance was higher for the upper position compared to the lower position within the crown. Carotenoid content and chlorophyll a/b ratio were higher for the younger phyllodes of younger trees. Increasing tree size induced modifications in the phyllode characteristics which are influenced by both morphogenetic and light gradients within the crown. This study demonstrated pronounced changes in terms of morphological and functional indicators of photosynthetic capacity in relation to phyllode position within the crown and to tree age. These morphogenetic effects on the phyllode characteristics should be taken into account in studies on phenotypic plasticity. |
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[Sabatier, Sylvie] CIRAD, UMR AMAP BotAnique & BioinforMat Architecture, F-34398 Montpellier 5, France, Email: sylvie-annabel.sabatier@cirad.fr |
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SPRINGER |
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0931-1890 |
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ISI:000262538700005 |
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EcoFoG @ eric.marcon @ |
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206 |
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Gond, V.; Bartholome, E.; Ouattara, F.; Nonguierma, A.; Bado, L. |
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Monitoring and mapping of waters and wetlands in arid regions using the SPOT-4 VEGETATION imaging system |
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Journal Article |
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2004 |
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International Journal of Remote Sensing |
Abbreviated Journal |
Int. J. Remote Sens. |
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25 |
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5 |
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987-1004 |
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Monitoring the state of small waterbodies and wetlands is very useful in dry regions, because their existence is entirely controlled by the rhythm of local rainfall. On VEGETATION image colour composites, waterbodies and marshy vegetation show up clearly. Yet simple image classification does not yield sufficiently good results because 'spectral signatures' vary significantly together with the ecological conditions of these surfaces. A robust contextual procedure taking into account local contrast was successfully developed and tested. A systematic validation was carried out and a map of waterbodies and wetlands was produced for Burkina Faso and neighbouring regions. |
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Ctr Commun Rech, I-21020 Ispra, VA, Italy, Email: valery.gond@cirad.fr |
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TAYLOR & FRANCIS LTD |
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0143-1161 |
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ISI:000187996500007 |
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EcoFoG @ eric.marcon @ |
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266 |
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Garcia-Davila, C.; Aldana Gomero, D.; Renno, J.-F.; Diaz Soria, R.; Hidalgo Pizango, G.; Flores Llampazo, G.; Castro-Ruiz, D.; Mejia de Loayza, E.; Angulo Chavez, C.; Mader, M.; Tysklind, N.; Paredes-Villanueva, K.; del Castillo Torres, D.; Degen, B.; Honorio Coronado, E.N. |
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Molecular evidence for three genetic species of Dipteryx in the Peruvian Amazon |
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Journal Article |
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2020 |
Publication |
Genetica |
Abbreviated Journal |
Genetica |
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148 |
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1 |
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1-11 |
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D. micrantha; Dipteryx charapilla; Genetic diversity; Microsatellites; Sequencing; Shihuahuaco; microsatellite DNA; plant DNA; allele; Dipteryx; DNA sequence; genetic variation; genetics; genotype; haplotype; Peru; phylogeny; plastid; river; species difference; Alleles; Dipteryx; DNA, Plant; Genetic Variation; Genotype; Haplotypes; Microsatellite Repeats; Peru; Phylogeny; Plastids; Rivers; Sequence Analysis, DNA; Species Specificity |
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There is a high international demand for timber from the genus Dipteryx, or “shihuahuaco” as it is known in Peru. Developing tools that allow the identification and discrimination of Dipteryx species is therefore important for supporting management of natural populations and to underpin legal trade of its timber. The objective of this study was the molecular characterization of Dipteryx species in the Peruvian Amazonia. Two plastid regions (cpDNA: trnH–psbA and matK) were sequenced and 11 microsatellite markers (nDNA) were genotyped for 32 individuals identified as Dipteryx charapilla, D. micrantha morphotype 1 and D. micrantha morphotype 2. Using the concatenated sequences of the plastid genes, we identified ten haplotypes that were not shared between the species or between the D. micrantha morphotypes. Haplotypic diversity was greater in D. micrantha morphotype 2 and D. charapilla than in D. micrantha morphotype 1, which presented only one haplotype with a wide distribution in Peru. The microsatellites allowed the discrimination of the same three clades and identified diagnostic alleles for each clade. These results allowed us to demonstrate that the two morphotypes of D. micrantha are different at both the plastid and nuclear markers, which supports the existence of three genetically distinct species in Peru. This study provides information for the genetic discrimination of Dipteryx species and emphasises the importance of conserving the genetic variability of this genus in the Peruvian Amazonia. © 2019, Springer Nature Switzerland AG. |
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Carrera de Ingeniería Foresta, Laboratorio de Dendrocronología, Facultad de Ciencias Agrícolas, Universidad Autónoma Gabriel René Moreno, Km 9 carretera al Norte, El Vallecito, Santa Cruz, Bolivia |
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Springer |
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00166707 (Issn) |
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EcoFoG @ webmaster @ |
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990 |
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Audigeos, D.; Brousseau, L.; Traissac, S.; Scotti-Saintagne, C.; Scotti, I. |
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Title |
Molecular divergence in tropical tree populations occupying environmental mosaics |
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Journal Article |
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2013 |
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Journal of Evolutionary Biology |
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26 |
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3 |
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529-544 |
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Candidate genes; Drought; Eperua falcata; Flooding; Neotropics; Outlier loci; Tree genetics |
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Unveiling the genetic basis of local adaptation to environmental variation is a major goal in molecular ecology. In rugged landscapes characterized by environmental mosaics, living populations and communities can experience steep ecological gradients over very short geographical distances. In lowland tropical forests, interspecific divergence in edaphic specialization (for seasonally flooded bottomlands and seasonally dry terra firme soils) has been proven by ecological studies on adaptive traits. Some species are nevertheless capable of covering the entire span of the gradient; intraspecific variation for adaptation to contrasting conditions may explain the distribution of such ecological generalists. We investigated whether local divergence happens at small spatial scales in two stands of Eperua falcata (Fabaceae), a widespread tree species of the Guiana Shield. We investigated Single Nucleotide Polymorphisms (SNP) and sequence divergence as well as spatial genetic structure (SGS) at four genes putatively involved in stress response and three genes with unknown function. Significant genetic differentiation was observed among sub-populations within stands, and eight SNP loci showed patterns compatible with disruptive selection. SGS analysis showed genetic turnover along the gradients at three loci, and at least one haplotype was found to be in repulsion with one habitat. Taken together, these results suggest genetic differentiation at small spatial scale in spite of gene flow. We hypothesize that heterogeneous environments may cause molecular divergence, possibly associated to local adaptation in E. falcata. © 2012 European Society For Evolutionary Biology. |
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AgroParisTech-ENGREF, UMR 0745, EcoFoG ('Ecologie des forêts de Guyane'), Campus Agronomique, Kourou, French Guiana, France |
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Export Date: 28 February 2013; Source: Scopus |
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EcoFoG @ webmaster @ |
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472 |
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Almeras, T.; Gril, J.; Yamamoto, H. |
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Modelling anisotropic maturation strains in wood in relation to fibre boundary conditions, microstructure and maturation kinetics |
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Journal Article |
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2005 |
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Holzforschung |
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Holzforschung |
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59 |
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3 |
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347-353 |
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anisotropy; boundary conditions; cell-wall maturation; growth strain; multilayer model; residual stress; wood fibre |
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A generalisation of existing mechanical models is proposed to account for the relation between wood macroscopic properties and fibre microstructure and chemical composition. It is applied to understanding of the origin of anisotropic maturation strains measured at the outermost surface of the xylem. Various assumptions are considered for boundary conditions of the fibre during the progressive maturation process and are applied to experimental data from the literature. Assumptions that the fibre is fully restrained in displacement, or fully unrestrained or unrestrained in the transverse direction only are all incompatible with observations. Indeed, within the tree, the fibre is restrained in the longitudinal and tangential directions, but unrestrained in the radial direction towards the bark. Mixed boundary conditions must be introduced to correctly simulate both longitudinal and tangential maturation strains. In the context of an analytical axisymmetric model, this is estimated by considering a parameter of partial release of tangential stress during maturation. Consistence with data and with finite element computation in the case of a square fibre confirmed that, because of the unrestrained radial condition, a large part of the tangential maturation stress is released in situ. |
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Nagoya Univ, Grad Sch Bioagr Sci, Lab Biomat Phys, Chikusa Ku, Nagoya, Aichi 4648601, Japan, Email: tancrede@nuagr1.agr.nagoya-u.ac.jp |
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WALTER DE GRUYTER & CO |
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0018-3830 |
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ISI:000228828800016 |
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EcoFoG @ eric.marcon @ |
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256 |
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Wagner, F.; Herault, B.; Stahl, C.; Bonal, D.; Rossi, V. |
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Modeling water availability for trees in tropical forests |
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Journal Article |
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2011 |
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Agricultural and Forest Meteorology |
Abbreviated Journal |
Agric. For. Meteorol. |
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151 |
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9 |
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1202-1213 |
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Water balance model; Amazonian rainforest; Time domain reflectometer; Bayesian inference; Tree drought stress |
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Modeling soil water availability for tropical trees is a prerequisite to predicting the future impact of climate change on tropical forests. In this paper we develop a discrete-time deterministic water balance model adapted to tropical rainforest climates, and we validate it on a large dataset that includes micrometeorological and soil parameters along a topographic gradient in a lowland forest of French Guiana. The model computes daily water fluxes (rainfall interception, drainage, tree transpiration and soil plus understorey evapotranspiration) and soil water content using three input variables: daily precipitation, potential evapotranspiration and solar radiation. A novel statistical approach is employed that uses Time Domain Reflectometer (TDR) soil moisture data to estimate water content at permanent wilting point and at field capacity, and root distribution. Inaccuracy of the TDR probes and other sources of uncertainty are taken into account by model calibration through a Bayesian framework. Model daily output includes relative extractable water, REW, i.e. the daily available water standardized by potential available water. The model succeeds in capturing temporal variations in REW regardless of topographic context. The low Root Mean Square Error of Predictions suggests that the model captures the most important drivers of soil water dynamics, i.e. water refilling and root water extraction. Our model thus provides a useful tool to explore the response of tropical forests to climate scenarios of changing rainfall regime and intensity. (C) 2011 Elsevier B.V. All rights reserved. |
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[Wagner, F; Herault, B] Univ Antilles Guyane, UMR Ecol Forets Guyane, F-97387 Kourou, France, Email: fabien.wagner@ecofog.gf |
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Elsevier Science Bv |
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0168-1923 |
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WOS:000294032000005 |
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EcoFoG @ webmaster @ |
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337 |
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Herault, B.; Beauchene, J.; Muller, F.; Wagner, F.; Baraloto, C.; Blanc, L.; Martin, J.M. |
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Modeling decay rates of dead wood in a neotropical forest |
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Journal Article |
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2010 |
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Oecologia |
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Oecologia |
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164 |
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1 |
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243-251 |
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Amazonia; Carbon cycle; Decomposition; Selective logging; Rainforest; Coarse woody debris |
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Variation of dead wood decay rates among tropical trees remains one source of uncertainty in global models of the carbon cycle. Taking advantage of a broad forest plot network surveyed for tree mortality over a 23-year period, we measured the remaining fraction of boles from 367 dead trees from 26 neotropical species widely varying in wood density (0.23-1.24 g cm(-3)) and tree circumference at death time (31.5-272.0 cm). We modeled decay rates within a Bayesian framework assuming a first order differential equation to model the decomposition process and tested for the effects of forest management (selective logging vs. unexploited), of mode of death (standing vs. downed) and of topographical levels (bottomlands vs. hillsides vs. hilltops) on wood decay rates. The general decay model predicts the observed remaining fraction of dead wood (R (2) = 60%) with only two biological predictors: tree circumference at death time and wood specific density. Neither selective logging nor local topography had a differential effect on wood decay rates. Including the mode of death into the model revealed that standing dead trees decomposed faster than downed dead trees, but the gain of model accuracy remains rather marginal. Overall, these results suggest that the release of carbon from tropical dead trees to the atmosphere can be simply estimated using tree circumference at death time and wood density. |
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[Herault, Bruno; Wagner, Fabien; Martin, Jean-Michel] Univ Antilles Guyane, UMR EcoFoG, F-97387 Kourou, France, Email: bruno.herault@ecofog.gf |
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0029-8549 |
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ISI:000280962200023 |
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EcoFoG @ eric.marcon @ |
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45 |
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