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Jaouen, G.; Sagne, A.; Buyck, B.; Decock, C.; Louisanna, E.; Manzi, S.; Baraloto, C.; Roy, M.; Schimann, H. |
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Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset |
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Journal Article |
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2019 |
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Scientific data |
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6 |
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206 |
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In Amazonia, the knowledge about Fungi remains patchy and biased towards accessible sites. This is particularly the case in French Guiana where the existing collections have been confined to few coastal localities. Here, we aimed at filling the gaps of knowledge in undersampled areas of this region, particularly focusing on the Basidiomycota. From 2011, we comprehensively collected fruiting-bodies with a stratified and reproducible sampling scheme in 126 plots. Sites of sampling reflected the main forest habitats of French Guiana in terms of soil fertility and topography. The dataset of 5219 specimens gathers 245 genera belonging to 75 families, 642 specimens are barcoded. The dataset is not a checklist as only 27% of the specimens are identified at the species level but 96% are identified at the genus level. We found an extraordinary diversity distributed across forest habitats. The dataset is an unprecedented and original collection of Basidiomycota for the region, making specimens available for taxonomists and ecologists. The database is publicly available in the GBIF repository ( https://doi.org/10.15468/ymvlrp ). |
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Department of Biological Science, Florida International University, FL, Miami, 33199, United States |
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Export Date: 28 October 2019 |
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EcoFoG @ webmaster @ |
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891 |
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Salas-Lopez, A.; Violle, C.; Mallia, L.; Orivel, J. |
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Land-use change effects on the taxonomic and morphological trait composition of ant communities in French Guiana |
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Journal Article |
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2018 |
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Insect Conservation and Diversity |
Abbreviated Journal |
Insect Conserv Divers |
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11 |
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2 |
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162-173 |
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Community assembly; Formicidae; functional diversity; gradient analysis; habitat filtering; land-use intensification; n-dimensional hypervolume approach |
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Abstract Land-use changes frequently lead to major changes in the composition and diversity of organisms. A reduction in the range of strategies enabling organisms to survive in a given environment and changes in the average trait values of species may potentially be associated with variations in species? number and identity. We investigated the variation in ant taxonomic composition and morphological trait diversity along a land-use gradient in French Guiana. We measured 13 core ant morphological traits on all species sampled. We then selected the set of five traits that best captured changes along the land-use gradient. Potential effects of the variation in morphological trait diversity and average values were evaluated by examining morphological traits individually as well as in combination. We found that variation in taxonomic diversity was unrelated to the plot-level morphospace. Conversely, a significant shift in taxonomic composition was accompanied by changes in the average values of community traits along the studied gradient, examined both individually and in combination. We argue that morphological trait values may be related to the success of different species in surviving in a given environment and, therefore, are indicative of the taxonomic turnover in ants along the land-use gradient. Nevertheless, in contradiction with theoretical expectations, the morphospace is only slightly affected by habitat filtering and loosely impacted by taxonomic changes. Examining the sensitivity of the morphospace to abiotic and biotic factors and how it reflects varying ecological pressures for species is thus of the utmost importance. |
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John Wiley & Sons, Ltd (10.1111) |
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1752-458x |
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doi: 10.1111/icad.12248 |
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EcoFoG @ webmaster @ |
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892 |
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Orivel, J.; Klimes, P.; Novotny, V.; Leponce, M. |
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Resource use and food preferences in understory ant communities along a complete elevational gradient in Papua New Guinea |
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Journal Article |
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2018 |
Publication |
Biotropica |
Abbreviated Journal |
Biotropica |
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50 |
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4 |
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641-648 |
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altitudinal gradient; food resources; Formicidae; Mt Wilhelm; nutritional ecology |
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Elevational gradients provide an interesting opportunity for studying the effect of climatic drivers over short distances on the various facets of biodiversity. It is globally assumed that the decrease in species richness with increasing elevation follows mainly the decrease in ecosystem productivity, but studies on functional diversity still remain limited. Here, we investigated how resource use and food preferences by both individual ant species and communities foraging in the understory vary with elevation along a complete elevational gradient (200 to 3200 m asl). Five bait types reflecting some of the main ecosystem processes in which ants are involved were tested: mutualism (sucrose and melezitose), predation (live termites), and detritivory (crushed insects and chicken feces). The observed monotonic decrease in both species richness and occurrences with elevation increase was accompanied by changes in some of the tested ecosystem processes. Such variations can be explained by resource availability and/or resource limitation: Predation and bird feces removal decreased with increasing elevation possibly reflecting a decline in species able to use these resources, while insect detritivory and nectarivory were most probably driven by resource limitation (or absence of limitation), as their relative use did not change along the gradient. Consequently, resource attractiveness (i.e., food preferences at the species level) appears as an important factor in driving community structuring in ants together with the abiotic environmental conditions. |
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John Wiley & Sons, Ltd (10.1111) |
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0006-3606 |
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doi: 10.1111/btp.12539 |
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EcoFoG @ webmaster @ |
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893 |
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Sprenger, P.P.; Hartke, J.; Feldmeyer, B.; Orivel, J.; Schmitt, T.; Menzel, F. |
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Influence of Mutualistic Lifestyle, Mutualistic Partner, and Climate on Cuticular Hydrocarbon Profiles in Parabiotic Ants |
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Journal Article |
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2019 |
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Journal of Chemical Ecology |
Abbreviated Journal |
J Chem Ecol |
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45 |
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9 |
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741-754 |
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A vital trait in insects is their cuticular hydrocarbon (CHC) profile, which protects the insect against desiccation and serves in chemical communication. Due to these functions, CHC profiles are shaped by both climatic conditions and biotic interactions. Here, we investigated CHC differentiation in the neotropical parabiotic ant species Crematogaster levior and Camponotus femoratus, which mutualistically share a nest. Both consist of two cryptic species each (Cr. levior A and B and Ca. femoratus PAT and PS) that differ genetically and possess strongly different CHC profiles. We characterized and compared CHC profiles of the four cryptic species in detail. Our results suggest that Cr. levior A, Ca. femoratus PAT and Ca. femoratus PS adapted their CHC profiles to the parabiotic lifestyle by producing longer-chain CHCs. At the same time, they changed their major CHC classes, and produce more alkadienes and methyl-branched alkenes compared to Cr. levior B or non-parabiotic species. The CHC profiles of Cr. levior B were more similar to related, non-parabiotic species of the Orthocrema clade than Cr. levior A, and the chain lengths of B were similar to the reconstructed ancestral state. Signals of both the parabiotic partner (biotic conditions) and climate (abiotic conditions) were found in the CHC profiles of all four cryptic species. Our data suggest that mutualisms shaped the CHC profiles of the studied species, in particular chain length and CHC class composition. Beside this, signals of the parabiotic partners indicate potential impacts of biotic interactions, via chemical mimicry or chemical camouflage. |
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1573-1561 |
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EcoFoG @ webmaster @ Sprenger2019 |
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894 |
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Dessert, C.; Clergue, C.; Rousteau, A.; Crispi, O.; Benedetti, M.F. |
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Atmospheric contribution to cations cycling in highly weathered catchment, Guadeloupe (Lesser Antilles) |
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Journal Article |
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2020 |
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Chemical Geology |
Abbreviated Journal |
Chem. Geol. |
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531 |
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119354 |
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Atmospheric deposit; Cation-nutrient recycling; Critical Zone; Saharan dust; Sr and Nd isotopes; Atmospheric chemistry; Biogeochemistry; Catchments; Deposits; Dust; Ecosystems; Forestry; Isotopes; Lakes; Positive ions; Rain; Recycling; Runoff; Soil moisture; Soil surveys; Tropics; Vegetation; Volcanoes; Weathering; Atmospheric deposits; Critical zones; Nutrient recycling; Saharan dust; Sr and Nd isotopes; Nutrients; catchment; cation; dust; isotopic composition; neodymium isotope; regolith; strontium isotope; trace element; water chemistry; water quality; Guadeloupe; Leeward Islands [Lesser Antilles]; Sahara |
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The important fertilizing role of atmospheric dust, and particularly African dust, in tropical rainforests is increasingly recognized but still poorly quantified. To better evaluate dust input into the Caribbean basin, we sampled critical zone compartments of a small forested volcanic catchment in Guadeloupe (soils, parent rock, atmospheric dust, plants, soil solutions, stream and rain waters). The aims of this study are to track sources of cation nutrients (Ca, Mg, K, Sr) developed on highly weathered soil in the rainforest of Guadeloupe, to quantify plant recycling of these nutrients, and to identify constraints on regolith development and its associated nutrient pool. In the Quiock Creek catchment, a large isotopic range of 87Sr/86Sr and eNd values was observed despite the small scale of observation. Sr isotopic composition of the dissolved load varied from 0.7084 in rainfall to 0.7110 in soil solution, whereas it ranges between 0.7068 and 0.7153 for soil samples and between 0.7096 and 0.7102 for plants. The Nd isotopic composition varied between -8.39 in near-surface soil samples to 2.71 in deeper soil. All samples had an intermediate signature between that of the bedrock endmember (87Sr/86Sr = 0.7038; eNd = 4.8) and the atmospheric endmember (sea salt: 87Sr/86Sr = 0.7092 and Saharan dust: 87Sr/86Sr = 0.7187, eNd=-11.5). The regolith was built on pyroclastic deposits, but, because of extreme leaching, the regolith has lost its original bedrock signature and inherited an exogenous atmospheric signature. Our results show that only the chemical weathering of the fresh near-surface minerals can provide nutrients to the ecosystem (first 30 cm). However, this dust weathering is too low to sustain the tropical forest ecosystem on its own. The cationic mass balance at the catchment scale, as well as the Sr isotopic signature, show that cation and Sr fluxes are of atmospheric origin only and that original bedrock no longer participates in nutrient cycles. The vegetation reflects the 87Sr/86Sr of the dissolved pool of atmospheric Sr. At the soil-plant scale, the cation-nutrient fluxes provided by vegetation (litter fall + leaf excretion) are major compared to input and output fluxes. The annual Ca, K, Sr and Mg fluxes within the vegetation are, respectively, 31, 28, 20 and 3 times greater than the exported fluxes at the outlet of the basin. The residence time of nutrients in the vegetation is 16 years for K and close to 45 years for Sr, Ca and Mg. These results emphasize the highly efficient vegetative turnover that dominates the nutrient cycle in the Quiock Creek catchment. This first characterization of biogeochemical cycles in the Guadeloupean rainforest suggests that the forest community of Quiock Creek is sustained by a small near-surface nutrient pool disconnected from the deep volcanic bedrock. We also demonstrated that, even with efficient nutrient recycling, Saharan dust plays a significant role in maintaining ecosystem productivity in Guadeloupe over long-time scales. |
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Laboratoire de biologie et de physiologie végétales, UMR EcoFoG, CNRS, Cirad, INRA, Université des Antilles, Université de Guyane, Pointe-à-Pitre, 97159, France |
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Elsevier B.V. |
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00092541 (Issn) |
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Export Date: 18 November 2019; Correspondence Address: Dessert, C.; Université de Paris, Institut de physique du globe de Paris, CNRSFrance; email: dessert@ipgp.fr |
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EcoFoG @ webmaster @ |
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895 |
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Ruiz-González, M.X.; Leroy, C.; Dejean, A.; Gryta, H.; Jargeat, P.; Carrión, A.D.A.; Orivel, J. |
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Do host plant and associated ant species affect microbial communities in myrmecophytes? |
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Journal Article |
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Year |
2019 |
Publication |
Insects |
Abbreviated Journal |
Insects |
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Volume |
10 |
Issue |
11 |
Pages |
391 |
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Allomerus decemarticulatus; Allomerus octoarticulatus; Azteca sp; Cf; Cordia nodosa; Depilis; Domatia; Hirtella physophora; Microbial diversity |
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Ant-associated microorganisms can play crucial and often overlooked roles, and given the diversity of interactions that ants have developed, the study of the associated microbiomes is of interest. We focused here on specialist plant-ant species of the genus Allomerus that grow a fungus to build galleries on their host-plant stems. Allomerus-inhabited domatia, thus, might be a rich arena for microbes associated with the ants, the plant, and the fungus. We investigated the microbial communities present in domatia colonised by four arboreal ants: Allomerus decemarticulatus, A. octoarticulatus, A. octoarticulatus var. demerarae, and the non-fungus growing plant-ant Azteca sp. cf. depilis, inhabiting Hirtella physophora or Cordia nodosa in French Guiana. We hypothesized that the microbial community will differ among these species. We isolated microorganisms from five colonies of each species, sequenced the 16S rRNA or Internal TranscribedSpacer (ITS) regions, and described both the alpha and beta diversities. We identified 69 microbial taxa, which belong to five bacterial and two fungal phyla. The most diverse phyla were Proteobacteria and Actinobacteria. The microbial community of Azteca cf. depilis and Allomerus spp. differed in composition and richness. Geographical distance affected microbial communities and richness but plant species did not. Actinobacteria were only associated with Allomerus spp. |
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Biodiversity Genomics Team, Plant Ecophysiology & Evolution Group, Guangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Daxuedonglu 100, Nanning, Guangxi 530005, China |
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Mdpi Ag |
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20754450 (Issn) |
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Export Date: 18 November 2019; Correspondence Address: Ruiz-González, M.X.; Departamento de Ciencias Biológicas, Universidad Técnica Particular de Loja, San Cayetano Alto s/n, Ecuador; email: marioxruizgonzalez@gmail.com |
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EcoFoG @ webmaster @ |
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896 |
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Van Langenhove, L.; Janssens, I.A.; Verryckt, L.; Brechet, L.; Hartley, I.P.; Stahl, C.; Courtois, E.; Urbina, I.; Grau, O.; Sardans, J.; Peguero, G.; Gargallo-Garriga, A.; Peñuelas, J.; Vicca, S. |
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Rapid root assimilation of added phosphorus in a lowland tropical rainforest of French Guiana |
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Journal Article |
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Year |
2020 |
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Soil Biology and Biochemistry |
Abbreviated Journal |
Soil Biol. Biochem. |
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140 |
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107646 |
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Fertilization; Nitrogen; Phosphorus; Plant root simulator probes; Root system; Tropical forest; Nitrogen; Nitrogen fertilizers; Phosphorus; Plants (botany); Soils; Tropics; Fertilization; Mycorrhizal fungus; N and P fertilizer; P availabilities; Plant root simulators; Root system; Tropical forest; Tropical rain forest; Forestry; Fungi |
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Tree growth on weathered soils in lowland tropical forests is limited by low phosphorous (P) availability. However, nutrient manupulation experiments do not always increase the P content in these trees, which raises the question whether trees are taking up added P. In French Guianese lowland rainforest, we measured changes in nitrogen (N) and P availability before and up to two months after N and P fertilizer addition, in soils with intact root systems and in soils where roots and mycorrhizal fungi were excluded by root exclusion cylinders. When the root system was excluded, P addition increased P availability to a much greater extent and for a longer time than in soils with an intact root system. Soil N dynamics were unaffected by root presence/absence. These results indicate rapid P uptake, but not N uptake, by tree roots, suggesting a very effective P acquisition process in these lowland rainforests. |
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Global Change Research Institute, Czech Academy of Sciences, Czech Republic |
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Elsevier Ltd |
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00380717 (Issn) |
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Export Date: 19 November 2019; Coden: Sbioa; Correspondence Address: Van Langenhove, L.; Centre of Excellence PLECO (Plants and Ecosystems), Department of Biology, University of Antwerp, Wilrijk, Belgium; email: leandro.vanlangenhove@uantwerpen.be |
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EcoFoG @ webmaster @ |
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897 |
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Croft, H.; Chen, J.M.; Wang, R.; Mo, G.; Luo, S.; Luo, X.; He, L.; Gonsamo, A.; Arabian, J.; Zhang, Y.; Simic-Milas, A.; Noland, T.L.; He, Y.; Homolová, L.; Malenovský, Z.; Yi, Q.; Beringer, J.; Amiri, R.; Hutley, L.; Arellano, P.; Stahl, C.; Bonal, D. |
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The global distribution of leaf chlorophyll content |
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Journal Article |
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2020 |
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Remote Sensing of Environment |
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Remote Sens. Environ. |
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236 |
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111479 |
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Leaf chlorophyll is central to the exchange of carbon, water and energy between the biosphere and the atmosphere, and to the functioning of terrestrial ecosystems. This paper presents the first spatially-continuous view of terrestrial leaf chlorophyll content (ChlLeaf) at the global scale. Weekly maps of ChlLeaf were produced from ENVISAT MERIS full resolution (300 m) satellite data using a two-stage physically-based radiative transfer modelling approach. Firstly, leaf-level reflectance was derived from top-of-canopy satellite reflectance observations using 4-Scale and SAIL canopy radiative transfer models for woody and non-woody vegetation, respectively. Secondly, the modelled leaf-level reflectance was input into the PROSPECT leaf-level radiative transfer model to derive ChlLeaf. The ChlLeaf retrieval algorithm was validated using measured ChlLeaf data from 248 sample measurements at 28 field locations, and covering six plant functional types (PFTs). Modelled results show strong relationships with field measurements, particularly for deciduous broadleaf forests (R2 = 0.67; RMSE = 9.25 microg cm-2; p < 0.001), croplands (R2 = 0.41; RMSE = 13.18 microg cm-2; p < 0.001) and evergreen needleleaf forests (R2 = 0.47; RMSE = 10.63 microg cm-2; p < 0.001). When the modelled results from all PFTs were considered together, the overall relationship with measured ChlLeaf remained good (R2 = 0.47, RMSE = 10.79 microg cm-2; p < 0.001). This result is an improvement on the relationship between measured ChlLeaf and a commonly used chlorophyll-sensitive spectral vegetation index; the MERIS Terrestrial Chlorophyll Index (MTCI; R2 = 0.27, p < 0.001). The global maps show large temporal and spatial variability in ChlLeaf, with evergreen broadleaf forests presenting the highest leaf chlorophyll values, with global annual median values of 54.4 microg cm-2. Distinct seasonal ChlLeaf phenologies are also visible, particularly in deciduous plant forms, associated with budburst and crop growth, and leaf senescence. It is anticipated that this global ChlLeaf product will make an important step towards the explicit consideration of leaf-level biochemistry in terrestrial water, energy and carbon cycle modelling. |
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UMR EEF, INRA Université de Lorraine, Champenoux54280, France |
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Elsevier Inc. |
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00344257 (Issn) |
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EcoFoG @ webmaster @ |
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898 |
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Bréchet, L.; Courtois, E.A.; Saint-Germain, T.; Janssens, I.A.; Asensio, D.; Ramirez-Rojas, I.; Soong, J.L.; Van Langenhove, L.; Verbruggen, E.; Stahl, C. |
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Title |
Disentangling Drought and Nutrient Effects on Soil Carbon Dioxide and Methane Fluxes in a Tropical Forest |
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Journal Article |
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Year |
2019 |
Publication |
Frontiers in Environmental Science |
Abbreviated Journal |
Front. Environ. Sci. |
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7 |
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180 |
Pages |
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carbon dioxide; drought; fertilization; methane; nitrogen; phosphorus; soil GHG fluxes; tropical forest |
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Tropical soils are a major contributor to the balance of greenhouse gas (GHG) fluxes in the atmosphere. Models of tropical GHG fluxes predict that both the frequency of drought events and changes in atmospheric deposition of nitrogen (N) will significantly affect dynamics of soil carbon dioxide (CO2) and methane (CH4) production and consumption. In this study, we examined the combined effect of a reduction in precipitation and an increase in nutrient availability on soil CO2 and CH4 fluxes in a primary French Guiana tropical forest. Drought conditions were simulated by intercepting precipitation falling through the forest canopy with tarpaulin roofs. Nutrient availability was manipulated through application of granular N and/or phosphorus (P) fertilizer to the soil. Soil water content (SWC) below the roofs decreased rapidly and stayed at continuously low values until roof removal, which as a consequence roughly doubled the duration of the dry season. After roof removal, SWC slowly increased but remained lower than in the control soils even after 2.5 months of wet-season precipitation. We showed that drought-imposed reduction in SWC decreased the CO2 emissions (i.e., CO2 efflux), but strongly increased the CH4 emissions. N, P, and N × P (i.e., NP) additions all significantly increased CO2 emission but had no effect on CH4 fluxes. In treatments where both fertilization and drought were applied, the positive effect of N, P, and NP fertilization on CO2 efflux was reduced. After roof removal, soil CO2 efflux was more resilient in the control plots than in the fertilized plots while there was only a modest effect of roof removal on soil CH4 fluxes. Our results suggest that a combined increase in drought and nutrient availability in soil can locally increase the emissions of both CO2 and CH4 from tropical soils, for a long term. |
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Lawrence Berkeley National Laboratory, Climate and Ecosystem Science Division, Berkeley, CA, United States |
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Frontiers Media S.A. |
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Export Date: 16 December 2019; Correspondence Address: Bréchet, L.; Centre of Excellence PLECO (Plant and Ecosystems), Department of Biology, University of AntwerpBelgium; email: laeti.brechet@gmail.com |
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EcoFoG @ webmaster @ |
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899 |
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Ghislain, B.; Alméras, T.; Prunier, J.; Clair, B. |
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Contributions of bark and tension wood and role of the G-layer lignification in the gravitropic movements of 21 tropical tree species |
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2019 |
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Annals of Forest Science |
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Ann. Forest Sci. |
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76 |
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4 |
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107 |
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Bark; Biomechanics; G-layer; Lignification; Tension wood; Tropical rainforest; Magnoliophyta |
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Key message: Gravitropic movements in angiosperm woody stems are achieved through the action of bark and/or wood motor, depending on the bark and wood fibre anatomy (with trellis structure or not; with G-layers or not). Bark motor is as efficient as wood motor to recover from tilting in young trees of 21 tropical species. Context: Angiosperm trees produce tension wood to control their orientation through changes in stem curvature. Tension wood is classified into 3 anatomical groups: with unlignified G-layer, with lignified G-layer and without G-layer. Aims: This study aimed at assessing whether this anatomical diversity reflects a diversity in efficiency of gravitropic movement. Methods: The study was conducted on tropical seedling from the three anatomical groups. Seedlings were staked and grown tilted. At the end of the experiment, changes in curvature when releasing the stem from the stake and when removing bark were measured. Three parameters were computed to compare the global efficiency of gravitropism (stem gravitropic efficiency) and the specific efficiency of motor mechanism based on wood (maturation strain of tension wood) and bark (standardized debarking curvature). Results: The maturation strain of tension wood was similar between species with unlignified and lignified G-layer. Species without G-layer exhibited low maturation strain and large debarking curvature, showing they rely on bark for gravitropism. Bark and wood achieved similar motor efficiency. Conclusion: Lignin does not affect the generation of tensile stress in the G-layer. Bark can be as efficient as wood as a motor of gravitropic movements. © 2019, The Author(s). |
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Laboratoire de Mécanique et Génie Civil (LMGC), Université de Montpellier, CNRS, Montpellier, 34095, France |
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12864560 (Issn) |
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900 |
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