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Almeras, T., Derycke, M., Jaouen, G., Beauchene, J., & Fournier, M. (2009). Functional diversity in gravitropic reaction among tropical seedlings in relation to ecological and developmental traits. J. Exp. Bot., 60(15), 4397–4410.
Abstract: Gravitropism is necessary for plants to control the orientation of their axes while they grow in height. In woody plants, stem re-orientations are costly because they are achieved through diameter growth. The functional diversity of gravitropism was studied to check if the mechanisms involved and their efficiency may contribute to the differentiation of height growth strategies between forest tree species at the seedling stage. Seedlings of eight tropical species were grown tilted in a greenhouse, and their up-righting movement and diameter growth were measured over three months. Morphological, anatomical, and biomechanical traits were measured at the end of the survey. Curvature analysis was used to analyse the up-righting response along the stems. Variations in stem curvature depend on diameter growth, size effects, the increase in self-weight, and the efficiency of the gravitropic reaction. A biomechanical model was used to separate these contributions. Results showed that (i) gravitropic movements were based on a common mechanism associated to similar dynamic patterns, (ii) clear differences in efficiency (defined as the change in curvature achieved during an elementary diameter increment for a given stem diameter) existed between species, (iii) the equilibrium angle of the stem and the anatomical characters associated with the efficiency of the reaction also differed between species, and (iv) the differences in gravitropic reaction were related to the light requirements: heliophilic species, compared to more shade-tolerant species, had a larger efficiency and an equilibrium angle closer to vertical. This suggests that traits determining the gravitropic reaction are related to the strategy of light interception and may contribute to the differentiation of ecological strategies promoting the maintenance of biodiversity in tropical rainforests.
Keywords: Biomechanics; French Guiana; functional diversity; gravitropism; reaction wood; tropical rainforest
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Chang, S. S., Clair, B., Ruelle, J., Beauchene, J., Di Renzo, F., Quignard, F., et al. (2009). Mesoporosity as a new parameter for understanding tension stress generation in trees. J. Exp. Bot., 60(11), 3023–3030.
Abstract: The mechanism for tree orientation in angiosperms is based on the production of high tensile stress on the upper side of the inclined axis. In many species, the stress level is strongly related to the presence of a peculiar layer, called the G-layer, in the fibre cell wall. The structure of the G-layer has recently been described as a hydrogel thanks to N-2 adsorption-desorption isotherms of supercritically dried samples showing a high mesoporosity (pores size from 2-50 nm). This led us to revisit the concept of the G-layer that had been, until now, only described from anatomical observation. Adsorption isotherms of both normal wood and tension wood have been measured on six tropical species. Measurements show that mesoporosity is high in tension wood with a typical thick G-layer while it is much less with a thinner G-layer, sometimes no more than normal wood. The mesoporosity of tension wood species without a G-layer is as low as in normal wood. Not depending on the amount of pores, the pore size distribution is always centred around 6-12 nm. These results suggest that, among species producing fibres with a G-layer, large structural differences of the G-layer exist between species.
Keywords: Growth stress; hydrogel; mesoporosity; tension wood
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Strasburg, J. L., Scotti-Saintagne, C., Scotti, I., Lai, Z., & Rieseberg, L. H. (2009). Genomic Patterns of Adaptive Divergence between Chromosomally Differentiated Sunflower Species. Mol. Biol. Evol., 26(6), 1341–1355.
Abstract: Understanding the genetic mechanisms of speciation and basis of species differences is among the most important challenges in evolutionary biology. Two questions of particular interest are what roles divergent selection and chromosomal differentiation play in these processes. A number of recently proposed theories argue that chromosomal rearrangements can facilitate the development and maintenance of reproductive isolation and species differences by suppressing recombination within rearranged regions. Reduced recombination permits the accumulation of alleles contributing to isolation and adaptive differentiation and protects existing differences from the homogenizing effects of introgression between incipient species. Here, we examine patterns of genetic diversity and divergence in rearranged versus collinear regions in two widespread, extensively hybridizing sunflower species, Helianthus annuus and Helianthus petiolaris, using sequence data from 77 loci distributed throughout the genomes of the two species. We find weak evidence for increased genetic divergence near chromosomal break points but not within rearranged regions overall. We find no evidence for increased rates of adaptive divergence on rearranged chromosomes; in fact, collinear chromosomes show a far greater excess of fixed amino acid differences between the two species. A comparison with a third sunflower species indicates that much of the nonsynonymous divergence between H. annuus and H. petiolaris probably occurred during or soon after their formation. Our results suggest a limited role for chromosomal rearrangements in genetic divergence, but they do document substantial adaptive divergence and provide further evidence of how species integrity and genetic identity can be maintained at many loci in the face of extensive hybridization and gene flow.
Keywords: species boundaries; chromosomal rearrangements; positive selection; hybridization; sunflowers; Helianthus
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Coutand, C., Dupraz, C., Jaouen, G., Ploquin, S., & Adam, B. (2008). Mechanical stimuli regulate the allocation of biomass in trees: Demonstration with young Prunus avium trees. Ann. Bot., 101(9), 1421–1432.
Abstract: Background and Aims Plastic tree-shelters are increasingly used to protect tree seedlings against browsing animals and herbicide drifts. The biomass allocation in young seedlings of deciduous trees is highly disturbed by common plastic tree-shelters, resulting in poor root systems and reduced diameter growth of the trunk. The shelters have been improved by creating chimney-effect ventilation with holes drilled at the bottom, resulting in stimulated trunk diameter growth, but the root deficit has remained unchanged. An experiment was set up to elucidate the mechanisms behind the poor root growth of sheltered Prunus avium trees. Methods Tree seedlings were grown either in natural windy conditions or in tree-shelters. Mechanical wind stimuli were suppressed in ten unsheltered trees by staking. Mechanical stimuli (bending) of the stem were applied in ten sheltered trees using an original mechanical device. Key Results Sheltered trees suffered from poor root growth, but sheltered bent trees largely recovered, showing that mechano-sensing is an important mechanism governing C allocation and the shoot-root balance. The use of a few artificial mechanical stimuli increased the biomass allocation towards the roots, as did natural wind sway. It was demonstrated that there was an acclimation of plants to the imposed strain. Conclusions This study suggests that if mechanical stimuli are used to control plant growth, they should be applied at low frequency in order to be most effective. The impact on the functional equilibrium hypothesis that is used in many tree growth models is discussed. The consequence of the lack of mechanical stimuli should be incorporated in tree growth models when applied to environments protected from the wind (e.g. greenhouses, dense forests).
Keywords: Prunus avium; growth; mechanical stress; bending; biomass; shoot/root ratio; wind; shelter
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Leroy, C., Jauneau, A., Quilichini, A., Dejean, A., & Orivel, J. (2008). Comparison between the anatomical and morphological structure of leaf blades and foliar domatia in the ant-plant Hirtella physophora (Chrysobalanaceae). Ann. Bot., 101(4), 501–507.
Abstract: Background and Aims Myrmecophytes, or ant-plants, are characterized by their ability to shelter colonies of some ant species in hollow structures, or ant-domatia, that are often formed by hypertrophy of the internal tissue at specific locations (i.e. trunk, branches, thorns and leaf pouches). In Hirtella physophora (Chrysobalanaceae), the focal species of this study, the ant-domatia consist of leaf pouches formed when the leaf rolls over onto itself to create two spheres at the base of the blade. Methods The morphological and anatomical changes through which foliar ant-domatia developed from the laminas are studied for the first time by using fresh and fixed mature leaves from the same H. physophora individuals. Key results Ant-domatia were characterized by larger extra-floral nectaries, longer stomatal apertures and lower stomatal density. The anatomical structure of the domatia differed in the parenchymatous tissue where palisade and spongy parenchyma were indistinct; chloroplast density was lower and lignified sclerenchymal fibres were more numerous compared with the lamina. In addition, the domatia were thicker than the lamina, largely because the parenchymatous and epidermal cells were enlarged. Conclusion Herein, the morphological and anatomical changes that permit foliar ant-domatia to be defined as a specialized leaf structure are highlighted. Similarities as well as structural modifications in the foliar ant-domatia compared with the lamina are discussed from botanical, functional and mutualistic points of view. These results are also important to understanding the reciprocal evolutionary changes in traits and, thus, the coevolutionary processes occurring in insect-plant mutualisms.
Keywords: anatomy; ant-plant mutualism; Chrysobalanaceae; extra-floral nectaries; French Guiana; Hirtella physophora; secondary domatia
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Nicolini, E., Caraglio, Y., Pelissier, R., Leroy, C., & Roggy, J. C. (2003). Epicormic branches: a growth indicator for the tropical forest tree, Dicorynia guianensis Amshoff (Caesalpiniaceae). Ann. Bot., 92(1), 97–105.
Abstract: Architectural analyses of temperate tree species using a chronological approach suggest that the expression of epicormic branches is closely related to low growth rates in the axes that make up the branching system. Therefore, sole consideration of epicormic criteria may be sufficient to identify trees with low secondary growth levels or with both low primary and secondary growth levels. In a tropical tree such as Dicorynia guianensis (basralocus), where chronological studies are difficult, this relationship could be very useful as an easily accessible indicator of growth potentials. A simple method of architectural tree description was used to characterize the global structure of more than 1650 basralocus trees and to evaluate their growth level. Measurements of simple growth characters [height, basal diameter, internode length of submittal part (top of the main axis of the tree)] and the observation of four structural binary descriptors on the main stem (presence of sequential branches and young epicormic branches, state of the submittal part, global orientation), indicated that epicormic branch formation is clearly related to a decrease in length of the successive growth units of the main stem. Analysis of height vs. diameter ratios among different tree subgroups, with and without epicormic branching, suggested that trees with epicormic branches generally have a low level of secondary growth compared with primary growth. (C) 2003 Annals of Botany Company.
Keywords: Dicorynia guianensis; architecture; epicormic branch; primary growth; secondary growth; tropical forest; French Guiana; height : diameter ratio
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Marcon, E., & Puech, F. (2003). Evaluating the geographic concentration of industries using distance-based methods. J. Econ. Geogr., 3(4), 409–428.
Abstract: We propose new methods for evaluating the spatial distribution of firms. To assess whether firms are concentrated or dispersed, economists have traditionally used indices that analyse the heterogeneity of a spatial structure at a single geographic level. We introduce distance-based methods, Besag's L function (derived from Ripley's K function) and Diggle and Chetwynd's D function to describe simultaneously spatial distribution at different geographical scales. Our empirical applications consider the distribution of French manufacturing firms in the Paris area and in France generally. For some geographic levels, results show significant concentration or dispersion of firms according to their sector of activity.
Keywords: agglomeration; clustering; geographic concentration; location of firms
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Coste, S., Roggy, J. C., Schimann, H., Epron, D., & Dreyer, E. (2011). A cost-benefit analysis of acclimation to low irradiance in tropical rainforest tree seedlings: leaf life span and payback time for leaf deployment. J. Exp. Bot., 62(11), 3941–3955.
Abstract: The maintenance in the long run of a positive carbon balance under very low irradiance is a prerequisite for survival of tree seedlings below the canopy or in small gaps in a tropical rainforest. To provide a quantitative basis for this assumption, experiments were carried out to determine whether construction cost (CC) and payback time for leaves and support structures, as well as leaf life span (i) differ among species and (ii) display an irradiance-elicited plasticity. Experiments were also conducted to determine whether leaf life span correlates to CC and payback time and is close to the optimal longevity derived from an optimization model. Saplings from 13 tropical tree species were grown under three levels of irradiance. Specific-CC was computed, as well as CC scaled to leaf area at the metamer level. Photosynthesis was recorded over the leaf life span. Payback time was derived from CC and a simple photosynthesis model. Specific-CC displayed only little interspecific variability and irradiance-elicited plasticity, in contrast to CC scaled to leaf area. Leaf life span ranged from 4 months to > 26 months among species, and was longest in seedlings grown under lowest irradiance. It was always much longer than payback time, even under the lowest irradiance. Leaves were shed when their photosynthesis had reached very low values, in contrast to what was predicted by an optimality model. The species ranking for the different traits was stable across irradiance treatments. The two pioneer species always displayed the smallest CC, leaf life span, and payback time. All species displayed a similar large irradiance-elicited plasticity.
Keywords: Carbon balance; construction cost; functional diversity; leaf life span; payback time; photosynthesis; tropical rainforest
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Rey, O., Loiseau, A., Facon, B., Foucaud, J., Orivel, J., Cornuet, J. M., et al. (2011). Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers. Mol. Biol. Evol., 28(9), 2591–2601.
Abstract: The little fire ant, Wasmannia auropunctata, displays a peculiar breeding system polymorphism. Classical haplo-diploid sexual reproduction between reproductive individuals occurs in some populations, whereas, in others, queens and males reproduce clonally. Workers are produced sexually and are sterile in both clonal and sexual populations. The evolutionary fate of the clonal lineages depends strongly on the underlying mechanisms allowing reproductive individuals to transmit their genomes to subsequent generations. We used several queen-offspring data sets to estimate the rate of transition from heterozygosity to homozygosity associated with recombination events at 33 microsatellite loci in thelytokous parthenogenetic queen lineages and compared these rates with theoretical expectations under various parthenogenesis mechanisms. We then used sexually produced worker families to define linkage groups for these 33 loci and to compare meiotic recombination rates in sexual and parthenogenetic queens. Our results demonstrate that queens from clonal populations reproduce by automictic parthenogenesis with central fusion. These same parthenogenetic queens produce normally segregating meiotic oocytes for workers, which display much lower rates of recombination (by a factor of 45) than workers produced by sexual queens. These low recombination rates also concern the parthenogenetic production of queen offspring, as indicated by the very low rates of transition from heterozygosity to homozygosity observed (from 0% to 2.8%). We suggest that the combination of automixis with central fusion and a major decrease in recombination rates allows clonal queens to benefit from thelytoky while avoiding the potential inbreeding depression resulting from the loss of heterozygosity during automixis. In sterile workers, the strong decrease of recombination rates may also facilitate the conservation over time of some coadapted allelic interactions within chromosomes that might confer an adaptive advantage in habitats disturbed by human activity, where clonal populations of W. auropunctata are mostly found.
Keywords: parthenogenesis; thelytoky; recombination; inbreeding; biological invasion; Wasmannia auropunctata
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Li, L., Preece, C., Lin, Q., Bréchet, L. M., Stahl, C., Courtois, E. A., et al. (2021). Resistance and resilience of soil prokaryotic communities in response to prolonged drought in a tropical forest. FEMS Microbiology Ecology, 97(9).
Abstract: Global climate changes such as prolonged duration and intensity of drought can lead to adverse ecological consequences in forests. Currently little is known about soil microbial community responses to such drought regimes in tropical forests. In this study, we examined the resistance and resilience of topsoil prokaryotic communities to a prolongation of the dry season in terms of diversity, community structure and co-occurrence patterns in a French Guianan tropical forest. Through excluding rainfall during and after the dry season, a simulated prolongation of the dry season by five months was compared to controls. Our results show that prokaryotic communities increasingly diverged from controls with the progression of rain exclusion. Furthermore, prolonged drought significantly affected microbial co-occurrence networks. However, both the composition and co-occurrence networks of soil prokaryotic communities immediately ceased to differ from controls when precipitation throughfall returned. This study thus suggests modest resistance but high resilience of microbial communities to a prolonged drought in tropical rainforest soils.
Keywords: drought, microbial communities, microbial network, tropical forest, resistance, resilience
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