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Author Coutand, C.; Dupraz, C.; Jaouen, G.; Ploquin, S.; Adam, B. openurl 
  Title Mechanical stimuli regulate the allocation of biomass in trees: Demonstration with young Prunus avium trees Type Journal Article
  Year 2008 Publication Annals of Botany Abbreviated Journal Ann. Bot.  
  Volume 101 Issue 9 Pages 1421-1432  
  Keywords Prunus avium; growth; mechanical stress; bending; biomass; shoot/root ratio; wind; shelter  
  Abstract Background and Aims Plastic tree-shelters are increasingly used to protect tree seedlings against browsing animals and herbicide drifts. The biomass allocation in young seedlings of deciduous trees is highly disturbed by common plastic tree-shelters, resulting in poor root systems and reduced diameter growth of the trunk. The shelters have been improved by creating chimney-effect ventilation with holes drilled at the bottom, resulting in stimulated trunk diameter growth, but the root deficit has remained unchanged. An experiment was set up to elucidate the mechanisms behind the poor root growth of sheltered Prunus avium trees. Methods Tree seedlings were grown either in natural windy conditions or in tree-shelters. Mechanical wind stimuli were suppressed in ten unsheltered trees by staking. Mechanical stimuli (bending) of the stem were applied in ten sheltered trees using an original mechanical device. Key Results Sheltered trees suffered from poor root growth, but sheltered bent trees largely recovered, showing that mechano-sensing is an important mechanism governing C allocation and the shoot-root balance. The use of a few artificial mechanical stimuli increased the biomass allocation towards the roots, as did natural wind sway. It was demonstrated that there was an acclimation of plants to the imposed strain. Conclusions This study suggests that if mechanical stimuli are used to control plant growth, they should be applied at low frequency in order to be most effective. The impact on the functional equilibrium hypothesis that is used in many tree growth models is discussed. The consequence of the lack of mechanical stimuli should be incorporated in tree growth models when applied to environments protected from the wind (e.g. greenhouses, dense forests).  
  Address [Coutand, Catherine; Jaouen, Gaelle; Ploquin, Stephane; Adam, Boris] Univ Clermont Ferrand, INRA, UMR PIAF, F-63100 Clermont Ferrand, France, Email: coutand@clermont.inra.fr  
  Corporate Author Thesis  
  Publisher (up) OXFORD UNIV PRESS Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0305-7364 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000255987500013 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 211  
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Author Leroy, C.; Jauneau, A.; Quilichini, A.; Dejean, A.; Orivel, J. openurl 
  Title Comparison between the anatomical and morphological structure of leaf blades and foliar domatia in the ant-plant Hirtella physophora (Chrysobalanaceae) Type Journal Article
  Year 2008 Publication Annals of Botany Abbreviated Journal Ann. Bot.  
  Volume 101 Issue 4 Pages 501-507  
  Keywords anatomy; ant-plant mutualism; Chrysobalanaceae; extra-floral nectaries; French Guiana; Hirtella physophora; secondary domatia  
  Abstract Background and Aims Myrmecophytes, or ant-plants, are characterized by their ability to shelter colonies of some ant species in hollow structures, or ant-domatia, that are often formed by hypertrophy of the internal tissue at specific locations (i.e. trunk, branches, thorns and leaf pouches). In Hirtella physophora (Chrysobalanaceae), the focal species of this study, the ant-domatia consist of leaf pouches formed when the leaf rolls over onto itself to create two spheres at the base of the blade. Methods The morphological and anatomical changes through which foliar ant-domatia developed from the laminas are studied for the first time by using fresh and fixed mature leaves from the same H. physophora individuals. Key results Ant-domatia were characterized by larger extra-floral nectaries, longer stomatal apertures and lower stomatal density. The anatomical structure of the domatia differed in the parenchymatous tissue where palisade and spongy parenchyma were indistinct; chloroplast density was lower and lignified sclerenchymal fibres were more numerous compared with the lamina. In addition, the domatia were thicker than the lamina, largely because the parenchymatous and epidermal cells were enlarged. Conclusion Herein, the morphological and anatomical changes that permit foliar ant-domatia to be defined as a specialized leaf structure are highlighted. Similarities as well as structural modifications in the foliar ant-domatia compared with the lamina are discussed from botanical, functional and mutualistic points of view. These results are also important to understanding the reciprocal evolutionary changes in traits and, thus, the coevolutionary processes occurring in insect-plant mutualisms.  
  Address [Leroy, Celine; Quilichini, Angelique; Dejean, Alain; Orivel, Jerome] Univ Toulouse 3, CNRS, UMR 5174, Lab Evolut & Diversite Biol, F-31062 Toulouse 9, France, Email: orivel@cict.fr  
  Corporate Author Thesis  
  Publisher (up) OXFORD UNIV PRESS Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0305-7364 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000253489700003 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 212  
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Author Nicolini, E.; Caraglio, Y.; Pelissier, R.; Leroy, C.; Roggy, J.C. openurl 
  Title Epicormic branches: a growth indicator for the tropical forest tree, Dicorynia guianensis Amshoff (Caesalpiniaceae) Type Journal Article
  Year 2003 Publication Annals of Botany Abbreviated Journal Ann. Bot.  
  Volume 92 Issue 1 Pages 97-105  
  Keywords Dicorynia guianensis; architecture; epicormic branch; primary growth; secondary growth; tropical forest; French Guiana; height : diameter ratio  
  Abstract Architectural analyses of temperate tree species using a chronological approach suggest that the expression of epicormic branches is closely related to low growth rates in the axes that make up the branching system. Therefore, sole consideration of epicormic criteria may be sufficient to identify trees with low secondary growth levels or with both low primary and secondary growth levels. In a tropical tree such as Dicorynia guianensis (basralocus), where chronological studies are difficult, this relationship could be very useful as an easily accessible indicator of growth potentials. A simple method of architectural tree description was used to characterize the global structure of more than 1650 basralocus trees and to evaluate their growth level. Measurements of simple growth characters [height, basal diameter, internode length of submittal part (top of the main axis of the tree)] and the observation of four structural binary descriptors on the main stem (presence of sequential branches and young epicormic branches, state of the submittal part, global orientation), indicated that epicormic branch formation is clearly related to a decrease in length of the successive growth units of the main stem. Analysis of height vs. diameter ratios among different tree subgroups, with and without epicormic branching, suggested that trees with epicormic branches generally have a low level of secondary growth compared with primary growth. (C) 2003 Annals of Botany Company.  
  Address Cirad, UMR AMAP, F-34398 Montpellier 05, France  
  Corporate Author Thesis  
  Publisher (up) OXFORD UNIV PRESS Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0305-7364 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000183980200010 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 245  
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Author Marcon, E.; Puech, F. openurl 
  Title Evaluating the geographic concentration of industries using distance-based methods Type Journal Article
  Year 2003 Publication Journal of Economic Geography Abbreviated Journal J. Econ. Geogr.  
  Volume 3 Issue 4 Pages 409-428  
  Keywords agglomeration; clustering; geographic concentration; location of firms  
  Abstract We propose new methods for evaluating the spatial distribution of firms. To assess whether firms are concentrated or dispersed, economists have traditionally used indices that analyse the heterogeneity of a spatial structure at a single geographic level. We introduce distance-based methods, Besag's L function (derived from Ripley's K function) and Diggle and Chetwynd's D function to describe simultaneously spatial distribution at different geographical scales. Our empirical applications consider the distribution of French manufacturing firms in the Paris area and in France generally. For some geographic levels, results show significant concentration or dispersion of firms according to their sector of activity.  
  Address ENGREF, Kourou 97310, French Guiana  
  Corporate Author Thesis  
  Publisher (up) OXFORD UNIV PRESS Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1468-2702 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000185742500004 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 269  
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Author Coste, S.; Roggy, J.C.; Schimann, H.; Epron, D.; Dreyer, E. pdf  openurl
  Title A cost-benefit analysis of acclimation to low irradiance in tropical rainforest tree seedlings: leaf life span and payback time for leaf deployment Type Journal Article
  Year 2011 Publication Journal of Experimental Botany Abbreviated Journal J. Exp. Bot.  
  Volume 62 Issue 11 Pages 3941-3955  
  Keywords Carbon balance; construction cost; functional diversity; leaf life span; payback time; photosynthesis; tropical rainforest  
  Abstract The maintenance in the long run of a positive carbon balance under very low irradiance is a prerequisite for survival of tree seedlings below the canopy or in small gaps in a tropical rainforest. To provide a quantitative basis for this assumption, experiments were carried out to determine whether construction cost (CC) and payback time for leaves and support structures, as well as leaf life span (i) differ among species and (ii) display an irradiance-elicited plasticity. Experiments were also conducted to determine whether leaf life span correlates to CC and payback time and is close to the optimal longevity derived from an optimization model. Saplings from 13 tropical tree species were grown under three levels of irradiance. Specific-CC was computed, as well as CC scaled to leaf area at the metamer level. Photosynthesis was recorded over the leaf life span. Payback time was derived from CC and a simple photosynthesis model. Specific-CC displayed only little interspecific variability and irradiance-elicited plasticity, in contrast to CC scaled to leaf area. Leaf life span ranged from 4 months to > 26 months among species, and was longest in seedlings grown under lowest irradiance. It was always much longer than payback time, even under the lowest irradiance. Leaves were shed when their photosynthesis had reached very low values, in contrast to what was predicted by an optimality model. The species ranking for the different traits was stable across irradiance treatments. The two pioneer species always displayed the smallest CC, leaf life span, and payback time. All species displayed a similar large irradiance-elicited plasticity.  
  Address [Coste, S; Epron, D; Dreyer, E] INRA, UMR1137, Ctr INRA Nancy, F-54280 Champenoux, France, Email: dreyer@nancy.inra.fr  
  Corporate Author Thesis  
  Publisher (up) Oxford Univ Press Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0022-0957 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000292838700021 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 331  
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Author Rey, O.; Loiseau, A.; Facon, B.; Foucaud, J.; Orivel, J.; Cornuet, J.M.; Robert, S.; Dobigny, G.; Delabie, J.H.C.; Mariano, C.D.F.; Estoup, A. openurl 
  Title Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers Type Journal Article
  Year 2011 Publication Molecular Biology and Evolution Abbreviated Journal Mol. Biol. Evol.  
  Volume 28 Issue 9 Pages 2591-2601  
  Keywords parthenogenesis; thelytoky; recombination; inbreeding; biological invasion; Wasmannia auropunctata  
  Abstract The little fire ant, Wasmannia auropunctata, displays a peculiar breeding system polymorphism. Classical haplo-diploid sexual reproduction between reproductive individuals occurs in some populations, whereas, in others, queens and males reproduce clonally. Workers are produced sexually and are sterile in both clonal and sexual populations. The evolutionary fate of the clonal lineages depends strongly on the underlying mechanisms allowing reproductive individuals to transmit their genomes to subsequent generations. We used several queen-offspring data sets to estimate the rate of transition from heterozygosity to homozygosity associated with recombination events at 33 microsatellite loci in thelytokous parthenogenetic queen lineages and compared these rates with theoretical expectations under various parthenogenesis mechanisms. We then used sexually produced worker families to define linkage groups for these 33 loci and to compare meiotic recombination rates in sexual and parthenogenetic queens. Our results demonstrate that queens from clonal populations reproduce by automictic parthenogenesis with central fusion. These same parthenogenetic queens produce normally segregating meiotic oocytes for workers, which display much lower rates of recombination (by a factor of 45) than workers produced by sexual queens. These low recombination rates also concern the parthenogenetic production of queen offspring, as indicated by the very low rates of transition from heterozygosity to homozygosity observed (from 0% to 2.8%). We suggest that the combination of automixis with central fusion and a major decrease in recombination rates allows clonal queens to benefit from thelytoky while avoiding the potential inbreeding depression resulting from the loss of heterozygosity during automixis. In sterile workers, the strong decrease of recombination rates may also facilitate the conservation over time of some coadapted allelic interactions within chromosomes that might confer an adaptive advantage in habitats disturbed by human activity, where clonal populations of W. auropunctata are mostly found.  
  Address [Rey, O; Loiseau, A; Facon, B; Foucaud, J; Cornuet, JM; Robert, S; Dobigny, G] INRA, UMR Ctr Biol Gest Populat INRA IRD CIRAD Montpe, Montferrier Sur Lez, France, Email: olivier.rey@supagro.inra.fr  
  Corporate Author Thesis  
  Publisher (up) Oxford Univ Press Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0737-4038 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000294552700019 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 339  
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Author Honorio Coronado, E.N.; Blanc-Jolivet, C.; Mader, M.; García-Dávila, C.R.; Gomero, D.A.; del Castillo Torres, D.; Llampazo, G.F.; Pizango, G.H.; Sebbenn, A.M.; Meyer-Sand, B.R.V.; Paredes-Villanueva, K.; Tysklind, N.; Troispoux, V.; Massot, M.; Carvalho, C.; de Lima, H.C.; Cardoso, D.; Degen, B. doi  openurl
  Title SNP markers as a successful molecular tool for assessing species identity and geographic origin of trees in the economically important South American legume genus Dipteryx Type Journal Article
  Year 2020 Publication Journal of Heredity Abbreviated Journal J. Hered.  
  Volume 111 Issue 4 Pages 346-356  
  Keywords Cumaru; Genetic assignment; Leguminosae; Timber verification; article; chloroplast; genetic association; genetic marker; geographic origin; indel mutation; nonhuman; single nucleotide polymorphism; species identification; structure analysis; tonka bean; Dipteryx; Fabaceae  
  Abstract Dipteryx timber has been heavily exploited in South America since 2000s due to the increasing international demand for hardwood. Developing tools for the genetic identification of Dipteryx species and their geographical origin can help to promote legal trading of timber. A collection of 800 individual trees, belonging to 6 different Dipteryx species, was genotyped based on 171 molecular markers. After the exclusion of markers out of Hardy-Weinberg equilibrium or with no polymorphism or low amplification, 83 nuclear, 29 chloroplast, 13 mitochondrial single nucleotide polymorphisms (SNPs), and 2 chloroplast and 5 mitochondrial INDELS remained. Six genetic groups were identified using Bayesian Structure analyses of the nuclear SNPs, which corresponded to the different Dipteryx species collected in the field. Seventeen highly informative markers were identified as suitable for species identification and obtained self-assignment success rates to species level of 78-96%. An additional set of 15 molecular markers was selected to determine the different genetic clusters found in Dipteryx odorata and Dipteryx ferrea, obtaining self-assignment success rates of 91-100%. The success to assign samples to the correct country of origin using all or only the informative markers improved when using the nearest neighbor approach (69-92%) compared to the Bayesian approach (33-80%). While nuclear and chloroplast SNPs were more suitable for differentiating the different Dipteryx species, mitochondrial SNPs were ideal for determining the genetic clusters of D. odorata and D. ferrea. These 32 selected SNPs will be invaluable genetic tools for the accurate identification of species and country of origin of Dipteryx timber. © The American Genetic Association 2020. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com  
  Address Instituto de Biologia, Universidade Federal da Bahia, Rua Barão de Jeremoabo, s.n., Ondina, Salvador, BA, 40170-115, Brazil  
  Corporate Author Thesis  
  Publisher (up) Oxford University Press Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00221503 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 965  
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Author Levionnois, Sébastien ; Salmon, Camille ; Alméras, Tancrède ; Clair, Bruno ; Ziegler, Camille ; Coste, Sabrina ; Stahl, Clement ; Gonzalez-Melo, Andrés ; Heinz, Christine ; Heuret, Patrick doi  openurl
  Title Anatomies, vascular architectures, and mechanics underlying the leaf size-stem size spectrum in 42 Neotropical tree species Type Journal Article
  Year 2021 Publication Journal of Experimental Botany Abbreviated Journal  
  Volume 72 Issue 22 Pages 7957–7969  
  Keywords  
  Abstract The leaf size-stem size spectrum is one of the main dimensions of plant ecological strategies. Yet the anatomical, mechanical, and hydraulic implications of small vs. large shoots are still poorly understood. We investigated 42 tropical rainforest tree species in French Guiana, with a wide range of leaf areas at the shoot level. We quantified the scaling of hydraulic and mechanical constraints with shoot size estimated as the water potential difference ΔΨ and the bending angle ΔΦ, respectively. We investigated how anatomical tissue area, flexural stiffness and xylem vascular architecture affect such scaling by deviating (or not) from theoretical isometry with shoot size variation. Vessel diameter and conductive path length were found to be allometrically related to shoot size, thereby explaining the independence between ΔΨ and shoot size. Leaf mass per area, stem length, and the modulus of elasticity were allometrically related with shoot size, explaining the independence between ΔΦ and shoot size. Our study also shows that the maintenance of both water supply and mechanical stability across the shoot size range are not in conflict.  
  Address  
  Corporate Author Thesis  
  Publisher (up) Oxford University Press Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 1050  
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Author Peterson, Michaela ; Jorge, Maria Luisa S.P. ; Jain, Avarna ; Keuroghlian, Alexine ; Oshima, Julia Emi F. ; Richard-Hansen, Cécile ; Berzins, Rachel ; Ribeiro, Milton Cezar ; Eaton, Don doi  openurl
  Title Temperature induces activity reduction in a Neotropical ungulate Type Journal Article
  Year 2021 Publication Journal of Mammalogy Abbreviated Journal  
  Volume 102 Issue 6 Pages 1-11  
  Keywords activity patterns, global warming, South America, thermoregulation, tropical forest, white-lipped peccaries  
  Abstract Because global climate change results in increasingly extreme temperatures and more frequent droughts, behavioral thermoregulation is one avenue by which species may adjust. Changes in activity patterns in response to temperature have been observed in a number of mammal species, but rarely have been investigated in humid tropical habitats. Here we examine the relationship between activity patterns and microclimate temperatures for white-lipped peccaries (Tayassu pecari, Tayassuidae, Cetartiodactyla) in four distinct biomes—the Cerrado, the Pantanal, the Atlantic Forest, and the Amazon. From 2013 to 2017, we monitored 30 white-lipped peccaries fitted with GPS collars that included accelerometers and temperature sensors. White-lipped peccaries were primarily diurnal, with peaks of activity in the morning and late afternoon, except in the Amazon where activity was high throughout the day. Total time active did not vary seasonally. White-lipped peccaries were significantly less likely to be active as temperatures increased, with the probability of being active decreasing by >49% in all biomes between 30 and 40°C. Our findings indicate that white-lipped peccaries are likely to be adversely impacted by rising temperatures, through being forced to reduce foraging time during their prime active periods.  
  Address  
  Corporate Author Thesis  
  Publisher (up) Oxford University Press Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 1051  
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Author de Aguiar, H.J.A.C.; Barros, L.A.C.; Silveira, L.I.; Petitclerc, F.; Etienne, S.; Orivel, J. pdf  url
doi  openurl
  Title Cytogenetic data for sixteen ant species from North-eastern Amazonia with phylogenetic insights into three subfamilies Type Journal Article
  Year 2020 Publication Comparative Cytogenetics Abbreviated Journal Comp. Cytogenet.  
  Volume 14 Issue 1 Pages 43-60  
  Keywords Biodiversity; Formicidae; Karyotype; Neotropical ants  
  Abstract Ants play essential roles in most terrestrial ecosystems and may be considered pests for agriculture and agroforestry. Recent morphological and molecular data have challenged conventional ant phylogeny and the interpretation of karyotypic variations. Existing Neotropical ant cytogenetic data focus on Atlantic rainforest species, and provide evolutionary and taxonomic insight. However, there are data for only 18 Amazonian species. In this study, we describe the karyotypes of 16 ant species belonging to 12 genera and three subfamilies, collected in the Brazilian state of Amapa, and in French Guiana. The karyotypes of six species are described for the first time, including that of the South American genus Allomerus Mayr, 1878. The karyotype of Crematogaster Lund, 1831 is also described for the first time for the New World. For other species, extant data for geographically distinct populations was compared with our own data, e.g. for the leafcutter ants Acromyrmex balzani (Emery, 1890) and Atta sexdens (Linnaeus, 1758). The information obtained for the karyotype of Dolichoderus imitator Emery, 1894 differs from extant data from the Atlantic forest, thereby highlighting the importance of population cytogenetic approaches. This study also emphasizes the need for good chromosome preparations for studying karyotype structure.  
  Address INRA, UMR EcoFoG, AgroParisTech, CIRAD, CNRS, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, Kourou Cedex, 97379, France  
  Corporate Author Thesis  
  Publisher (up) Pensoft Publishers Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 19930771 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 917  
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