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| Author | Taureau, F.; Robin, M.; Proisy, C.; Fromard, F.; Imbert, D.; Debaine, F. | ||||
| Title | Mapping the mangrove forest canopy using spectral unmixing of very high spatial resolution satellite images | Type | Journal Article | ||
| Year | 2019 | Publication | Remote Sensing | Abbreviated Journal | Remote Sens. |
| Volume | 11 | Issue | 3 | Pages | 367 |
| Keywords | Forest structure; Guadeloupe; Hemispherical photographs; Mangrove; Mayotte; New Caledonia; Remote sensing; Image resolution; Photography; Photomapping; Pixels; Remote sensing; Satellites; Vegetation; Forest structure; Guadeloupe; Hemispherical photographs; Mangrove; Mayotte; New Caledonia; Forestry | ||||
| Abstract | Despite the lowtree diversity and scarcity of the understory vegetation, the high morphological plasticity of mangrove trees induces, at the stand level, a very large variability of forest structures that need to be mapped for assessing the functioning of such complex ecosystems. Fully constrained linear spectral unmixing (FCLSU) of very high spatial resolution (VHSR) multispectral images was tested to fine-scale map mangrove zonations in terms of horizontal variation of forest structure. The study was carried out on three Pleiades-1A satellite images covering French island territories located in the Atlantic, Indian, and Pacific Oceans, namely Guadeloupe, Mayotte, and New Caledonia archipelagos. In each image, FCLSU was trained from the delineation of areas exclusively related to four components including either pure vegetation, soil (ferns included), water, or shadows. It was then applied to the whole mangrove cover imaged for each island and yielded the respective contributions of those four components for each image pixel. On the forest stand scale, the results interestingly indicated a close correlation between FCLSU-derived vegetation fractions and canopy closure estimated from hemispherical photographs R 2 = 0.95) and a weak relation with the Normalized Difference Vegetation Index (R 2 = 0.29). Classification of these fractions also offered the opportunity to detect and map horizontal patterns of mangrove structure in a given site. K-means classifications of fraction indeed showed a global view of mangrove structure organization in the three sites, complementary to the outputs obtained from spectral data analysis. Our findings suggest that the pixel intensity decomposition applied to VHSR multispectral satellite images can be a simple but valuable approach for (i) mangrove canopy monitoring and (ii) mangrove forest structure analysis in the perspective of assessing mangrove dynamics and productivity. As with Lidar-based surveys, these potential new mapping capabilities deserve further physically based interpretation of sunlight scattering mechanisms within forest canopy. © 2019 by the authors. | ||||
| Address | UMR Ecologie des Forêts de Guyane (EcoFoG), INRA, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, French Guiana, 97310, France | ||||
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Mdpi Ag | Place of Publication | Editor | ||
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| ISSN | 20724292 (Issn) | ISBN | Medium | ||
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| Notes | Export Date: 25 February 2019; Correspondence Address: Taureau, F.; Université de Nantes, UMR CNRS 6554 Littoral Environnement Télédétection Géomatique, Campus TertreFrance; email: florent.taureau@univ-nantes.fr; Funding details: Université de Nantes; Funding text 1: Funding: A part of this study was funded by the French Coastal Conservancy Institute. It was conducted as part of the PhD work of Florent Taureau supported by the University of Nantes.; References: Duke, N.C., Mangrove Coast (2014) Encyclopedia of Marine Geosciences, pp. 1-17. , Harff, J., Meschede, M., Petersen, S., Thiede, J., Eds.; Springer: Berlin, Germany; Feller, I.C., Lovelock, C.E., Berger, U., McKee, K.L., Joye, S.B., Ball, M.C., Biocomplexity in Mangrove Ecosystems (2010) Annu. Rev. Mar. Sci, 2, pp. 395-417; Krauss, K.W., Lovelock, C.E., McKee, K.L., López-Hoffman, L., Ewe, S.M., Sousa, W.P., Environmental drivers in mangrove establishment and early development: A review (2008) Aquat. Bot, 89, pp. 105-127; Chapman, V.J., (1976) Mangrove Vegetation, , Cramer: Vaduz, Liechtenstein; Friess, D.A., Lee, S.Y., Primavera, J.H., Turning the tide on mangrove loss (2016) Mar. Pollut. Bull, 109, pp. 673-675; Alongi, D.M., Mangrove forests: Resilience, protection from tsunamis, and responses to global climate change (2008) Estuar. Coast. Shelf Sci, 76, pp. 1-13; Bouillon, S., Borges, A.V., Castañeda-Moya, E., Diele, K., Dittmar, T., Duke, N.C., Kristensen, E., Rivera-Monroy, V.H., Mangrove production and carbon sinks: A revision of global budget estimates: Global mangrove carbon budgets (2008) Glob. Biogeochem. Cycles, p. 22; Donato, D.C., Kauffman, J.B., Murdiyarso, D., Kurnianto, S., Stidham, M., Kanninen, M., Mangroves among the most carbon-rich forests in the tropics (2011) Nat. Geosci, 4, pp. 293-297; Duke, N.C., Nagelkerken, I., Agardy, T., Wells, S., van Bochove, J.-W., (2014) The Importance of Mangroves to People: A Call to Action, , United Nations Environment ProgrammeWorld Conservation Monitoring Centre: Cambridge, UK; De Lacerda, L.D., (2010) Mangrove Ecosystems: Function and Management, , Springer: Berlin, Germany; Lee, S.Y., Primavera, J.H., Dahdouh-Guebas, F., McKee, K., Bosire, J.O., Cannicci, S., Diele, K., Koedam, N., Cyril Marchand Ecological role and services of tropical mangrove ecosystems: a reassessment: Reassessment of mangrove ecosystem services (2014) Glob. Ecol. Biogeogr, 23, pp. 726-743; Spalding, M., Kainuma, M., Collins, L., (2010) World Atlas of Mangroves, , Routledge: Abingdon, UK; (2007) The World's Mangroves 1980-2005: A Thematic Study Prepared in the Framework of the Global Forest Resources Assessment 2005, , Food and Agriculture Organization of the United Nations: Rome, Italy; Ellison, J.C., Vulnerability assessment of mangroves to climate change and sea-level rise impacts (2015) Wetl. Ecol. Manag, 23, pp. 115-137; Ellison, J., Zouh, I., Vulnerability to Climate Change of Mangroves: Assessment from Cameroon, Central Africa (2012) Biology, 1, pp. 617-638; Gilman, E.L., Ellison, J., Duke, N.C., Field, C., Threats to mangroves from climate change and adaptation options: A review (2008) Aquat. Bot, 89, pp. 237-250; Li, S., Meng, X., Ge, Z., Zhang, L., Evaluation of the threat from sea-level rise to the mangrove ecosystems in Tieshangang Bay, Southern China (2015) Ocean Coast. Manag, 109, pp. 1-8; Alongi, D.M., Present state and future of the world's mangrove forests (2002) Environ. Conserv, 29, pp. 331-349; Panta, M., (2003) Analisys of Forest Canopy Density and Factors Affecting It Using RS and GIS Techniques-A Case Study from Chitwan District of Nepal, , International Institue for Geo-Information Science and Earth Observation: Hengelosestraat, The Netherlands; Birnbaum, P., Canopy surface topography in a French Guiana forest and the folded forest theory (2001) Plant Ecol, 153, pp. 293-300; Lowman, M.D., Schowalter, T., Franklin, J., (2012) Methods in Forest Canopy Research, , University of California Press: Berkeley, CA, USA; Parker, G.G., Structure and microclimate of forest canopies (1995) Forest Canopies: A Review of Research on a Biological Frontier, pp. 73-106. , Lowman, M., Nadkarni, N., Eds.; Academic Press: San Diego, CA, USA; Frazer, G.W., Trofymow, J.A., Lertzman, K.P., (1997) A Method for Estimating Canopy Openness, Effective Leaf Area Index, and Photosynthetically Active Photon Flux Density Using Hemispherical Photography and Computerized Image Analysis Techniques, , Canadian Forest Service, Pacific Forestry Centre: Victoria, BC, Canada; Smith, M.-L., Anderson, J., Fladeland, M., Forest canopy structural properties (2008) Field Measurements for Forest Carbon Monitoring: A Landscape-Scale Approach, pp. 179-196. , Springer: Berlin, Germany; Green, E.P., Clark, C.D., Mumby, P.J., Edwards, A.J., Ellis, A.C., Remote sensing techniques for mangrove mapping (1998) Int. J. Remote Sens, 19, pp. 935-956; Sari, S.P., Rosalina, D., Mapping and Monitoring of Mangrove Density Changes on tin Mining Area (2016) Procedia Environ. Sci, 33, pp. 436-442; Yuvaraj, E., Dharanirajan, K., Saravanan, N., Karpoorasundarapandian, N., (2014) Evaluation of Vegetation Density of the Mangrove Forest in South Andaman Island Using Remote Sensing and GIS Techniques, pp. 19-25. , International Science Congress Association: India; Garcia-Haro, F.J., Gilabert, M.A., Melia, J., Linear spectral mixture modelling to estimate vegetation amount from optical spectral data (1996) Int. J. Remote Sens, 17, pp. 3373-3400; Braun, M., Martin, H., Mapping imperviousness using NDVI and linear spectral unmixing of ASTER data in the Cologne-Bonn region (Germany) (2003) Proceedings of the SPIE 10th International Symposium on Remote Sensing, , Barcelona, Spain, 8-12 September; Drake, N.A., Mackin, S., Settle, J.J., Mapping Vegetation, Soils, and Geology in Semiarid Shrublands Using Spectral Matching and Mixture Modeling of SWIR AVIRIS Imagery (1999) Remote Sens. Environ, 68, pp. 12-25; Guerschman, J.P., Scarth, P.F., McVicar, T.R., Renzullo, L.J., Malthus, T.J., Stewart, J.B., Rickards, J.E., Trevithick, R., Assessing the effects of site heterogeneity and soil properties when unmixing photosynthetic vegetation, non-photosynthetic vegetation and bare soil fractions from Landsat and MODIS data (2015) Remote Sens. Environ, 161, pp. 12-26; Stagakis, S., Vanikiotis, T., Sykioti, O., Estimating forest species abundance through linear unmixing of CHRIS/PROBA imagery (2016) ISPRS J. Photogramm. Remote Sens, 119, pp. 79-89; Liu, T., Yang, X., Mapping vegetation in an urban area with stratified classification and multiple endmember spectral mixture analysis (2013) Remote Sens. Environ, 133, pp. 251-264; Silvan-Cardenas, J.L., Wang, L., Fully Constrained Linear Spectral Unmixing: Analytic Solution Using Fuzzy Sets (2010) IEEE Trans. Geosci. Remote Sens, 48, pp. 3992-4002; Souza, C., Mapping forest degradation in the Eastern Amazon from SPOT 4 through spectral mixture models (2003) Remote Sens. Environ, 87, pp. 494-506; Ji, M., Feng, J., Subpixel measurement of mangrove canopy closure via spectral mixture analysis (2011) Front. Earth Sci, 5, pp. 130-137; Tiner, R.W., Lang, M.W., Klemas, V.V., (2015) Remote Sensing of Wetlands: Applications and Advances, , CRC Press: Boca Raton, FL, USA; Haase, D., Jänicke, C., Wellmann, T., Front and back yard green analysis with subpixel vegetation fractions from earth observation data in a city (2019) Landsc. Urban Plan, 182, pp. 44-54; Dronova, I., Object-Based Image Analysis inWetland Research: A Review (2015) Remote Sens, 7, pp. 6380-6413; Fei, S.X., Shan, C.H., Hua, G.Z., Remote Sensing of Mangrove Wetlands Identification (2011) Procedia Environ. Sci, 10, pp. 2287-2293; Heumann, B.W., Satellite remote sensing of mangrove forests: Recent advances and future opportunities (2011) Prog. Phys. Geogr, 35, pp. 87-108; Proisy, C., Couteron, P., Fromard, F., Predicting and mapping mangrove biomass from canopy grain analysis using Fourier-based textural ordination of IKONOS images (2007) Remote Sens. Environ, 109, pp. 379-392; Imbert, D., Labbé, P., Rousteau, A., Hurricane damage and forest structure in Guadeloupe, French West Indies (1996) J. Trop. Ecol, 12, pp. 663-680; Herteman, M., Fromard, F., Lambs, L., Effects of pretreated domestic wastewater supplies on leaf pigment content, photosynthesis rate and growth of mangrove trees: A field study from Mayotte Island, SW Indian Ocean (2011) Ecol. Eng, 37, pp. 1283-1291; Cremades, C., (2010) Cartographie des Habitats Naturels des Mangroves de Mayotte, , Direction de l'Agriculture et de la Forêt Service Environnement et Forêt: Mamoudzou, Mayotte; Jeanson, M., (2009) Morphodynamique du Littoral de Mayotte: des Processus au Réseau de Surveillance, , Université du Littoral Côte d'Opale: Dunkerque, France; Marchand, C., Dumas, P., (2007) Typologies et Biodiversité des Mangroves de Nouvelle-Calédonie, , IRD: Nouméa, Nouvelle-Calédonie; Glatthorn, J., Beckschäfer, P., Standardizing the Protocol for Hemispherical Photographs: Accuracy Assessment of Binarization Algorithms (2014) PLoS ONE, 9; Betbeder, J., Nabucet, J., Pottier, E., Baudry, J., Corgne, S., Hubert-Moy, L., Detection and Characterization of Hedgerows Using TerraSAR-X Imagery (2014) Remote Sens, 6, pp. 3752-3769; Betbeder, J., Hubert-Moy, L., Burel, F., Corgne, S., Baudry, J., Assessing ecological habitat structure from local to landscape scales using synthetic aperture radar (2015) Ecol. Indic, 52, pp. 545-557; Betbeder, J., Rapinel, S., Corgne, S., Pottier, E., Hubert-Moy, L., TerraSAR-X dual-pol time-series for mapping of wetland vegetation (2015) ISPRS J. Photogramm. Remote Sens, 107, pp. 90-98; (2013), Reference Book, eCognition Developer 8.9'; Trimble: Sunnyvale, CA, USA; Lobell, D.B., Asner, G.P., Law, B.E., Treuhaft, R.N., View angle effects on canopy reflectance and spectral mixture analysis of coniferous forests using AVIRIS (2002) Int. J. Remote Sens, 23, pp. 2247-2262; Viennois, G., Proisy, C., Feret, J.B., Prosperi, J., Sidik, F., Suhardjono; Rahmania, R., Longépé, N., Gaspar, P., Multitemporal Analysis of High-Spatial-Resolution Optical Satellite Imagery for Mangrove Species Mapping in Bali, Indonesia (2016) IEEE J. Sel. Top. Appl. Earth Obs. Remote Sens, 9, pp. 3680-3686; Adler-Golden, S.M., Matthew, M.W., Bernstein, L.S., Levine, R.Y., Berk, A., Richtsmeier, S.C., Acharya, P.K., Hoke, M.L., Atmospheric Correction for Short-wave Spectral Imagery Based on MODTRAN4 (1999) Soc. Photo-Opt. Instrum. Eng, 3753, pp. 61-70; Adeline, K.R.M., Chen, M., Briottet, X., Pang, S.K., Paparoditis, N., Shadow detection in very high spatial resolution aerial images: A comparative study (2013) ISPRS J. Photogramm. Remote Sens, 80, pp. 21-38; Heinz, D.C., Fully constrained least squares linear spectral mixture analysis method for material quantification in hyperspectral imagery (2001) IEEE Trans. Geosci. Remote Sens, 39, pp. 529-545; Caliński, T., Harabasz, J., A dendrite method for cluster analysis (1974) Commun. Stat, 3, pp. 1-27; Asner, G.P., Warner, A.S., Canopy shadow in IKONOS satellite observations of tropical forests and savannas (2003) Remote Sens. Environ, 87, pp. 521-533; Dennison, P.E., Halligan, K.Q., Roberts, D.A., A comparison of error metrics and constraints for multiple endmember spectral mixture analysis and spectral angle mapper (2004) Remote Sens. Environ, 93, pp. 359-367; Kuusk, A., The Hot Spot Effect in Plant Canopy Reflectance (1991) Photon-Vegetation Interactions: Applications in Optical Remote Sensing and Plant Ecology, pp. 139-159. , Myneni, R.B., Ross, J., Eds.; Springer: Berlin/Heidelberg, Germany; Barbier, N., Proisy, C., Véga, C., Sabatier, D., Couteron, P., Bidirectional texture function of high resolution optical images of tropical forest: An approach using LiDAR hillshade simulations (2011) Remote Sens. Environ, 115, pp. 167-179; Fromard, F., Vega, C., Proisy, C., Half a century of dynamic coastal change affecting mangrove shorelines of French Guiana (2004) A case study based on remote sensing data analyses and field surveys. Mar. Geol, 208, pp. 265-280; Ozdemir, I., Linear transformation to minimize the effects of variability in understory to estimate percent tree canopy cover using RapidEye data (2014) GIS Remote Sens, 51, pp. 288-300; Proisy, C., Féret, J.B., Lauret, N., Gastellu-Etchegorry, J.P., Mangrove Forest Dynamics Using Very High Spatial Resolution Optical Remote Sensing A2-Baghdadi, Nicolas (2016) Land Surface Remote Sensing in Urban and Coastal Areas, pp. 269-295. , Zribi, M., Ed.; Elsevier: Amsterdam, The Netherlands | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 861 | ||
| Permanent link to this record | |||||
| Author | Ruiz-González, M.X.; Leroy, C.; Dejean, A.; Gryta, H.; Jargeat, P.; Carrión, A.D.A.; Orivel, J. | ||||
| Title | Do host plant and associated ant species affect microbial communities in myrmecophytes? | Type | Journal Article | ||
| Year | 2019 | Publication | Insects | Abbreviated Journal | Insects |
| Volume | 10 | Issue | 11 | Pages | 391 |
| Keywords | Allomerus decemarticulatus; Allomerus octoarticulatus; Azteca sp; Cf; Cordia nodosa; Depilis; Domatia; Hirtella physophora; Microbial diversity | ||||
| Abstract | Ant-associated microorganisms can play crucial and often overlooked roles, and given the diversity of interactions that ants have developed, the study of the associated microbiomes is of interest. We focused here on specialist plant-ant species of the genus Allomerus that grow a fungus to build galleries on their host-plant stems. Allomerus-inhabited domatia, thus, might be a rich arena for microbes associated with the ants, the plant, and the fungus. We investigated the microbial communities present in domatia colonised by four arboreal ants: Allomerus decemarticulatus, A. octoarticulatus, A. octoarticulatus var. demerarae, and the non-fungus growing plant-ant Azteca sp. cf. depilis, inhabiting Hirtella physophora or Cordia nodosa in French Guiana. We hypothesized that the microbial community will differ among these species. We isolated microorganisms from five colonies of each species, sequenced the 16S rRNA or Internal TranscribedSpacer (ITS) regions, and described both the alpha and beta diversities. We identified 69 microbial taxa, which belong to five bacterial and two fungal phyla. The most diverse phyla were Proteobacteria and Actinobacteria. The microbial community of Azteca cf. depilis and Allomerus spp. differed in composition and richness. Geographical distance affected microbial communities and richness but plant species did not. Actinobacteria were only associated with Allomerus spp. | ||||
| Address | Biodiversity Genomics Team, Plant Ecophysiology & Evolution Group, Guangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Daxuedonglu 100, Nanning, Guangxi 530005, China | ||||
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Mdpi Ag | Place of Publication | Editor | ||
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| ISSN | 20754450 (Issn) | ISBN | Medium | ||
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| Notes | Export Date: 18 November 2019; Correspondence Address: Ruiz-González, M.X.; Departamento de Ciencias Biológicas, Universidad Técnica Particular de Loja, San Cayetano Alto s/n, Ecuador; email: marioxruizgonzalez@gmail.com | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 896 | ||
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| Author | Barassé, V.; Touchard, A.; Téné, N.; Tindo, M.; Kenne, M.; Klopp, C.; Dejean, A.; Bonnafé, E.; Treilhou, M. | ||||
| Title | The peptide venom composition of the fierce stinging ant tetraponera aethiops (formicidae: Pseudomyrmecinae) | Type | Journal Article | ||
| Year | 2019 | Publication | Toxins | Abbreviated Journal | Toxins |
| Volume | 11 | Issue | 12 | Pages | 732 |
| Keywords | Defensive venom; Dimeric peptides; Peptidome; Tetraponera aethiops | ||||
| Abstract | In the mutualisms involving certain pseudomyrmicine ants and different myrmecophytes (i.e., plants sheltering colonies of specialized “plant-ant” species in hollow structures), the ant venom contributes to the host plant biotic defenses by inducing the rapid paralysis of defoliating insects and causing intense pain to browsing mammals. Using integrated transcriptomic and proteomic approaches, we identified the venom peptidome of the plant-ant Tetraponera aethiops (Pseudomyrmecinae). The transcriptomic analysis of its venom glands revealed that 40% of the expressed contigs encoded only seven peptide precursors related to the ant venom peptides from the A-superfamily. Among the 12 peptide masses detected by liquid chromatography-mass spectrometry (LC-MS), nine mature peptide sequences were characterized and confirmed through proteomic analysis. These venom peptides, called pseudomyrmecitoxins (PSDTX), share amino acid sequence identities with myrmeciitoxins known for their dual offensive and defensive functions on both insects and mammals. Furthermore, we demonstrated through reduction/alkylation of the crude venom that four PSDTXs were homo- and heterodimeric. Thus, we provide the first insights into the defensive venom composition of the ant genus Tetraponera indicative of a streamlined peptidome. | ||||
| Address | CNRS, UMR EcoFoG, AgroParisTech, Cirad, INRA, Université des Antilles, Université de Guyane, Kourou, 97310, France | ||||
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Mdpi Ag | Place of Publication | Editor | ||
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| Series Volume | Series Issue | Edition | |||
| ISSN | 20726651 (Issn) | ISBN | Medium | ||
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| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 902 | ||
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| Author | Caron, H.; Molino, J.-F.; Sabatier, D.; Léger, P.; Chaumeil, P.; Scotti-Saintagne, C.; Frigério, J.-M.; Scotti, I.; Franc, A.; Petit, R.J. | ||||
| Title | Chloroplast DNA variation in a hyperdiverse tropical tree community | Type | Journal Article | ||
| Year | 2019 | Publication | Ecology and Evolution | Abbreviated Journal | Ecology and Evolution |
| Volume | 9 | Issue | 8 | Pages | 4897-4905 |
| Keywords | chloroplast DNA; DNA barcoding; genetic diversity; hybridization; incomplete lineage sorting; introgression; species diversity; tropical trees | ||||
| Abstract | We investigate chloroplast DNA variation in a hyperdiverse community of tropical rainforest trees in French Guiana, focusing on patterns of intraspecific and interspecific variation. We test whether a species genetic diversity is higher when it has congeners in the community with which it can exchange genes and if shared haplotypes are more frequent in genetically diverse species, as expected in the presence of introgression. We sampled a total of 1,681 individual trees from 472 species corresponding to 198 genera and sequenced them at a noncoding chloroplast DNA fragment. Polymorphism was more frequent in species that have congeneric species in the study site than in those without congeners (30% vs. 12%). Moreover, more chloroplast haplotypes were shared with congeners in polymorphic species than in monomorphic ones (44% vs. 28%). Despite large heterogeneities caused by genus-specific behaviors in patterns of hybridization, these results suggest that the higher polymorphism in the presence of congeners is caused by local introgression rather than by incomplete lineage sorting. Our findings suggest that introgression has the potential to drive intraspecific genetic diversity in species-rich tropical forests. | ||||
| Address | INRA, UR629 Ecologie des Forêts Méditerranéennes, URFM, Avignon, France | ||||
| Corporate Author | Thesis | ||||
| Publisher |
John Wiley and Sons Ltd | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
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| Series Volume | Series Issue | Edition | |||
| ISSN | 20457758 (Issn) | ISBN | Medium | ||
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| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 870 | ||
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| Author | Hartke, J.; Sprenger, P.P.; Sahm, J.; Winterberg, H.; Orivel, J.; Baur, H.; Beuerle, T.; Schmitt, T.; Feldmeyer, B.; Menzel, F. | ||||
| Title | Cuticular hydrocarbons as potential mediators of cryptic species divergence in a mutualistic ant association | Type | Journal Article | ||
| Year | 2019 | Publication | Ecology and Evolution | Abbreviated Journal | |
| Volume | 9 | Issue | 16 | Pages | 9160-9176 |
| Keywords | environmental association; integrative taxonomy; niche differentiation; population structure; sexual selection; speciation | ||||
| Abstract | Upon advances in sequencing techniques, more and more morphologically identical organisms are identified as cryptic species. Often, mutualistic interactions are proposed as drivers of diversification. Species of the neotropical parabiotic ant association between Crematogaster levior and Camponotus femoratus are known for highly diverse cuticular hydrocarbon (CHC) profiles, which in insects serve as desiccation barrier but also as communication cues. In the present study, we investigated the association of the ants’ CHC profiles with genotypes and morphological traits, and discovered cryptic species pairs in both genera. To assess putative niche differentiation between the cryptic species, we conducted an environmental association study that included various climate variables, canopy cover, and mutualistic plant species. Although mostly sympatric, the two Camponotus species seem to prefer different climate niches. However in the two Crematogaster species, we could not detect any differences in niche preference. The strong differentiation in the CHC profiles may thus suggest a possible role during speciation itself either by inducing assortative mating or by reinforcing sexual selection after the speciation event. We did not detect any further niche differences in the environmental parameters tested. Thus, it remains open how the cryptic species avoid competitive exclusion, with scope for further investigations. © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. | ||||
| Address | Department of Evolutionary Animal Ecology, University of Bayreuth, Bayreuth, Germany | ||||
| Corporate Author | Thesis | ||||
| Publisher |
John Wiley and Sons Ltd | Place of Publication | Editor | ||
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| ISSN | 20457758 (Issn) | ISBN | Medium | ||
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| Notes | Export Date: 2 September 2019; Correspondence Address: Hartke, J.; Senckenberg Biodiversity and Climate Research CentreGermany; email: Juliane.Hartke@senckenberg.de; Funding details: Leibniz-Gemeinschaft; Funding details: Agence Nationale de la Recherche, Not Available; Funding details: Deutsche Forschungsgemeinschaft, DFG, ME 3842/5‐1; Funding text 1: We thank Philippe Cerdan and Aurelie Dourdain for research permissions in the Hydreco Lab Petit Saut and the Paracou Research Station, respectively. Similarly, we thank Patrick Châtelet, Philippe Gaucher, and Dorothée Deslignes for permission to sample in the Les Nouragues Reserve. Further on, we thank Heike Stypa for supporting us in preparing the chemical samples. We thank Aidin Niamir for his helpful advice regarding climate data analysis. Financial support for this study was provided by the German Science Foundation (DFG) as a grant to Barbara Feldmeyer (FE 1333/7‐1), Thomas Schmitt (SCHM 2645/7‐1), and Florian Menzel (ME 3842/5‐1) and a grant managed by the French Agence Nationale de la Recherche (CEBA, ref. ANR‐10‐LABX‐25‐01) to Jérôme Orivel. The publication of this article was funded by the Open Access Fund of the Leibniz Association. Finally, we thank Markus Pfenninger and two anonymous reviewers for providing helpful comments on an earlier version of this manuscript.; References: Adler, P.B., HilleRisLambers, J., Levine, J.M., A niche for neutrality (2007) Ecology Letters, 10, pp. 95-104. , https://doi.org/10.1111/j.1461-0248.2006.00996.x; Aitchison, J., The statistical analysis of compositional data (1982) Journal of the Royal Statistical Society: Series B (Methodological), 44, pp. 139-177. , https://doi.org/10.1111/j.2517-6161.1982.tb01195.x; Andersson, M., Sexual selection, natural selection and quality advertisement (1982) Biological Journal of the Linnean Society, 17, pp. 375-393. , https://doi.org/10.1111/j.1095-8312.1982.tb02028.x; Bartlett, J.W., Frost, C., Reliability, repeatability and reproducibility: Analysis of measurement errors in continuous variables (2008) Ultrasound in Obstetrics and Gynecology, 31, pp. 466-475. , https://doi.org/10.1002/uog.5256; Baur, H., Kranz-Baltensperger, Y., Cruaud, A., Rasplus, J.Y., Timokhov, A.V., Gokhman, V.E., Morphometric analysis and taxonomic revision of Anisopteromalus Ruschka (Hymenoptera: Chalcidoidea: Pteromalidae) – An integrative approach (2014) Systematic Entomology, 39, pp. 691-709; Baur, H., Leuenberger, C., Analysis of ratios in multivariate morphometry (2011) Systematic Biology, 60, pp. 813-825. , https://doi.org/10.1093/sysbio/syr061; Bell, G., The distribution of abundance in neutral communities (2017) The American Naturalist, 155, p. 606. , https://doi.org/10.2307/3078983; Bickford, D., Lohman, D.J., Sodhi, N.S., Ng, P.K.L., Meier, R., Winker, K., Das, I., Cryptic species as a window on diversity and conservation (2007) Trends in Ecology & Evolution, 22, pp. 148-155. , https://doi.org/10.1016/j.tree.2006.11.004; Blomberg, S.P., Garland, T., Ives, A.R., Testing for phylogenetic signal in comparative data: Behavioral traits are more labile (2003) Evolution, 57, pp. 717-745; Blomquist, G.J., Structure and analysis of insect hydrocarbons (2010) Insect hydrocarbons: Biology, biochemistry, and chemical ecology, pp. 19-34. , G. J. Blomquist, A.-G. Bagnères, (Eds.),, New York, NY, Cambridge University Press; Blomquist, G.J., Bagnères, A.-G., Introduction: History and overview of insect hydrocarbons (2010) Insect hydrocarbons: Biology, biochemistry, and chemical ecology, pp. 3-18. , G. J. Blomquist, A.-G. Bagnères, (Eds.),, New York, NY, Cambridge University Press; Bolaños, L.M., Rosenblueth, M., Manrique de Lara, A., Migueles-Lozano, A., Gil-Aguillón, C., Mateo-Estrada, V., Martínez-Romero, E., Cophylogenetic analysis suggests cospeciation between the Scorpion Mycoplasma Clade symbionts and their hosts (2019) PLoS ONE, 14. , https://doi.org/10.1371/journal.pone.0209588; Bouckaert, R., Heled, J., Kühnert, D., Vaughan, T., Wu, C.-H., Xie, D., Drummond, A.J., BEAST 2: A Software Platform for Bayesian Evolutionary Analysis (2014) PLoS Computational Biology, 10. , https://doi.org/10.1371/journal.pcbi.1003537; Boyle, J.H., Martins, D., Musili, P.M., Pierce, N.E., Population genomics and demographic sampling of the ant-plant Vachellia drepanolobium and its symbiotic ants from sites across its range in East Africa (2018) Frontiers in Ecology and Evolution, 7, p. 206. , https://doi.org/10.3389/fevo.2019.00206; Brückner, A., Heethoff, M., A chemo-ecologists' practical guide to compositional data analysis (2017) Chemoecology, 27, pp. 33-46. , https://doi.org/10.1007/s00049-016-0227-8; Carlson, D.A., Bernier, U.R., Sutton, B.D., Elution patterns from capillary GC for methyl-branched alkanes (1998) Journal of Chemical Ecology, 24, pp. 1845-1865; Chomicki, G., Ward, P.S., Renner, S.S., Macroevolutionary assembly of ant/plant symbioses: Pseudomyrmex ants and their ant-housing plants in the Neotropics (2015) Proceedings of the Royal Society B: Biological Sciences, 282, p. 20152200; Chung, H., Carroll, S.B., Wax, sex and the origin of species: Dual roles of insect cuticular hydrocarbons in adaptation and mating (2015) BioEssays, 37, pp. 822-830. , https://doi.org/10.1002/bies.201500014; Chung, H., Loehlin, D.W., Dufour, H.D., Vaccaro, K., Millar, J.G., Carroll, S.B., A single gene affects both ecological divergence and mate choice in Drosophila (2014) Science, 343 (6175), pp. 1148-1151; Cruaud, A., Rønsted, N., Chantarasuwan, B., Chou, L.S., Clement, W.L., Couloux, A., Savolainen, V., An extreme case of plant – insect codiversification: Figs and fig-pollinating wasps (2012) Systematic Biology, 61, pp. 1029-1047. , https://doi.org/10.1093/sysbio/sys068; Csösz, S., Wagner, H.C., Bozsó, M., Seifert, B., Arthofer, W., Schlick-Steiner, B.C., Pénzes, Z., Tetramorium indocile Santschi, 1927 stat. rev. is the proposed scientific name for Tetramorium sp. C sensu Schlick-Steiner et al. (2006) based on combined molecular and morphological evidence (Hymenoptera: Formicidae) (2014) Zoologischer Anzeiger, 253, pp. 469-481; Darwell, C.T., Cook, J.M., Cryptic diversity in a fig wasp community — morphologically differentiated species are sympatric but cryptic species are parapatric (2017) Molecular Ecology, 26, pp. 937-950. , https://doi.org/10.1111/mec.13985; Davidson, D.W., Ecological studies of Neotropical ant gardens (1988) Ecology, 69, pp. 1138-1152. , https://doi.org/10.2307/1941268; De Queiroz, K., Species concepts and species delimitation (2007) Systematic Biology, 56, pp. 879-886. , https://doi.org/10.1080/10635150701701083; de Vienne, D.M., Refrégier, G., López-Villavicencio, M., Tellier, A., Hood, M.E., Giraud, T., Cospeciation vs host-shift speciation: Methods for testing, evidence from natural associations and relation to coevolution (2013) New Phytologist, 198, pp. 347-385. , https://doi.org/10.1111/nph.12150; Degnan, P.H., Lazarus, A.B., Brock, C.D., Wernegreen, J.J., Host – symbiont stability and fast evolutionary rates in an ant – Bacterium Association: Cospeciation of Camponotus species and their endosymbionts, Candidatus Blochmannia (2004) Systematic Biology, 53, pp. 95-110. , https://doi.org/10.1080/10635150490264842; Dieckmann, U., Doebeli, M., On the origin of species by sympatric speciation (1999) Nature, 400, pp. 354-357. , https://doi.org/10.1038/22521; Doebeli, M., Dieckmann, U., Evolutionary branching and sympatric speciation caused by different types of ecological interactions (2000) The American Naturalist, 156, pp. S77-S101. , https://doi.org/10.1086/303417; Emery, V.J., Tsutsui, N.D., Recognition in a social symbiosis: Chemical phenotypes and nestmate recognition behaviors of Neotropical parabiotic ants (2013) PLoS ONE, 8. , https://doi.org/10.1371/journal.pone.0056492; Excoffier, L., Lischer, H.E.L., Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows (2010) Molecular Ecology Resources, 10, pp. 564-567; García-Robledo, C., Kuprewicz, E.K., Staines, C.L., Erwin, T.L., Kress, W.J., Limited tolerance by insects to high temperatures across tropical elevational gradients and the implications of global warming for extinction (2015) Proceedings of the National Academy of Sciences of the United States of America, 113, pp. 680-685. , https://doi.org/10.1073/pnas.1507681113; Gause, G.F., Experimental studies on the struggle for existence I. Mixed population of two species of yeast (1932) Journal of Experimental Biology, 9, pp. 389-402; Gebiola, M., Monti, M.M., Johnson, R.C., Woolley, J.B., Hunter, M.S., Giorgini, M., Pedata, P.A., A revision of the Encarsia pergandiella species complex (Hymenoptera: Aphelinidae) shows cryptic diversity in parasitoids of whitefly pests (2017) Systematic Entomology, 42, pp. 31-59; Grundt, H.H., Kjølner, S., Borgen, L., Rieseberg, L.H., Brochmann, C., High biological species diversity in the arctic flora (2006) Proceedings of the National Academy of Sciences of the United States of America, 103, pp. 972-975. , https://doi.org/10.1073/pnas.0510270103; Guimarães, P.R., Jordano, P., Thompson, J.N., Evolution and coevolution in mutualistic networks (2011) Ecology Letters, 14, pp. 877-885. , https://doi.org/10.1111/j.1461-0248.2011.01649.x; Gustafson, K.D., Kensinger, B.J., Bolek, M.G., Luttbeg, B., Distinct snail (Physa) morphotypes from different habitats converge in shell shape and size under common garden conditions (2014) Evolutionary Ecology Research, 16, pp. 77-89; Han, M.V., Zmasek, C.M., PhyloXML: XML for evolutionary biology and comparative genomics (2009) BMC Bioinformatics, 10, p. 356. , https://doi.org/10.1186/1471-2105-10-356; Hardin, G., The competitive exclusion principle (1960) Science, 131, pp. 1292-1297; Heethoff, M., Laumann, M., Weigmann, G., Raspotnig, G., Integrative taxonomy: Combining chemical, morphological and molecular data for delineation of the parthenogenetic Trhypochthonius tectorum complex (Acari, Oribatida, Trhypochthoniidae) (2011) Frontiers in Zoology, 8, p. 2; Hoeksema, J.D., Bruna, E.M., Pursuing the big questions about interspecific mutualism: A review of theoretical approaches (2000) Oecologia, 125, pp. 321-330. , https://doi.org/10.1007/s004420000496; Hoffmann, A.A., Turelli, M., Simmons, G.M., Unidirectional incompatibility between populations of Drosophila simulans (1986) Evolution, 40, pp. 692-701; Hosokawa, T., Kikuchi, Y., Nikoh, N., Shimada, M., Fukatsu, T., Strict Host-Symbiont cospeciation and reductive genome evolution in insect gut bacteria (2006) PLoS Biology, 4. , https://doi.org/10.1371/journal.pbio.0040337; Hubbell, S.P., (2001) The unified neutral theory of biodiversity and biogeography, , Princeton, NJ, Princeton University Press; Hubbell, S.P., Neutral theory in community ecology and the hypothesis of functional equivalence (2005) Functional Ecology, 19, pp. 166-172. , https://doi.org/10.1111/j.0269-8463.2005.00965.x; Hudson, E.J., Price, T.D., Pervasive reinforcement and the role of sexual selection in biological speciation (2014) Journal of Heredity, 105, pp. 821-833. , https://doi.org/10.1093/jhered/esu041; Janz, N., Nyblom, K., Nylin, S., Evolutionary dynamics of host-plant specialization: A case study of the Tribe Nymohalini (2001) Evolution, 55, pp. 783-796; Jousselin, E., van Noort, S., Berry, V., Rasplus, J.-Y., Rønsted, N., Erasmus, J.C., Greeff, J.M., One fig to bind them all: Host conservatism in a fig wasp community unraveled by cospeciation analyses among pollinating and nonpollinating fig wasps (2008) Evolution, 62, pp. 1777-1797. , https://doi.org/10.1111/j.1558-5646.2008.00406.x; Kamilar, J.M., Cooper, N., Phylogenetic singal in primate behaviour, ecolog anf life history (2013) Philosophical Transactions of the Royal Society of London. Series B, 368, p. 20120341; Karger, D.N., Conrad, O., Böhner, J., Kawohl, T., Kreft, H., Soria-Auza, R.W., Kessler, M., Climatologies at high resolution for the earth's land surface areas (2017) Scientific Data, 4, p. 170122. , https://doi.org/10.1038/sdata.2017.122; Kawakita, A., Takimura, A., Terachi, T., Sota, T., Kato, M., Cospeciation analysis of an obligate pollination mutualism: Have Glochidon trees (Euphorbiaceae) and pollinating Epicephala moths (Gracillaridae) diverified in parallel? (2004) Evolution, 58, pp. 2201-2214; Klingenberg, C.P., Size, shape, and form: Concepts of allometry in geometric morphometrics (2016) Development Genes and Evolution, 226, pp. 113-137. , https://doi.org/10.1007/s00427-016-0539-2; Kumar, S., Stecher, G., Li, M., Knyaz, C., Tamura, K., MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms (2018) Molecular Biology and Evolution, 35, pp. 1547-1549. , https://doi.org/10.1093/molbev/msy096; Leavitt, D.H., Starrett, J., Westphal, M.F., Hedin, M., Multilocus sequence data reveal dozens of putative cryptic species in a radiation of endemic Californian mygalomorph spiders (Araneae, Mygalomorphae, Nemesiidae) (2015) Molecular Phylogenetics and Evolution, 91, pp. 56-67. , https://doi.org/10.1016/j.ympev.2015.05.016; Leigh, J.W., Bryant, D., POPART: Full-feature software for haplotype network construction (2015) Methods in Ecology and Evolution, 6, pp. 1110-1116; Liaw, A., Wiener, M., Classification and regression by randomForest (2002) R News, 2, pp. 18-22; Martin, S.J., Helanterä, H., Drijfhout, F.P., Evolution of species-specific cuticular hydrocarbon patterns in Formica ants (2008) Biological Journal of the Linnean Society, 95, pp. 131-140. , https://doi.org/10.1111/j.1095-8312.2008.01038.x; Menzel, F., Blaimer, B.B., Schmitt, T., How do cuticular hydrocarbons evolve? Physiological constraints and climatic and biotic selection pressures act on a complex functional trait (2017) Proceedings of the Royal Society B-Biological Sciences, 284, p. 20161727. , https://doi.org/10.1098/rspb.2016.1727; Menzel, F., Linsenmair, K.E., Blüthgen, N., Selective interspecific tolerance in tropical Crematogaster-Camponotus associations (2008) Animal Behavior, 75, pp. 837-846. , https://doi.org/10.1016/j.anbehav.2007.07.005; Menzel, F., Orivel, J., Kaltenpoth, M., Schmitt, T., What makes you a potential partner? Insights from convergently evolved ant-ant symbioses (2014) Chemoecology, 24, pp. 105-119. , https://doi.org/10.1007/s00049-014-0149-2; Menzel, F., Schmitt, T., Blaimer, B.B., The evolution of a complex trait: Cuticular hydrocarbons in ants evolve independent from phylogenetic constraints (2017) Journal of Evolutionary Biology, 30, pp. 1372-1385. , https://doi.org/10.1111/jeb.13115; Montero-Pau, J., Gomez, A., Muñoz, J., Application of an inexpensive and high-throughput genomic DNA extraction method for the molecular ecology of zooplanktonic diapausing eggs (2008) Limnology and Oceanography: Methods, 6, pp. 218-222. , https://doi.org/10.4319/lom.2008.6.218; Nosil, P., (2012) Ecological speciation, , Oxford, UK, Oxford University Press; Oksanen, J., Blanchet, F.G., Friendly, M., Kindt, R., Legendre, P., McGlinn, D., Wagner, H., (2016) vegan: Community Ecology Package, , https://cran.r-project.org/web/packages/vegan/; Orivel, J., Errard, C., Dejean, A., Ant gardens: Interspecific recognition in parabiotic ant species (1997) Behavioral Ecology and Sociobiology, 40, pp. 87-93. , https://doi.org/10.1007/s002650050319; Paradis, E., Pegas: An R package for population genetics with an integrated-modular approach (2010) Bioinformatics, 26, pp. 419-420. , https://doi.org/10.1093/bioinformatics/btp696; Quek, S.-P., Davies, S.J., Itino, T., Pierce, N.E., Codiversification in an ant-plant mutualism: Stem texture and the evolution of host use in Crematogaster (Formicidae: Myrmicinae) Inhabitants of Macaranga (Euphorbiaceae) (2004) Evolution, 58, pp. 554-570; (2018) R: A language and environment for statistical computing, , Vienna, Austria, R Foundation for Statistical Computing; Rambaut, A., Drummond, A.J., Xie, D., Baele, G., Suchard, M.A., Posterior summarization in Bayesian Phylogenetics using Tracer 1.7 (2018) Systematic Biology, 67, pp. 901-904. , https://doi.org/10.1093/sysbio/syy032; Ronquist, F., Teslenko, M., Van Der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Huelsenbeck, J.P., MrBayes 3.2: Efficient bayesian phylogenetic inference and model choice across a large model space (2012) Systematic Biology, 61, pp. 539-542; Schlenke, T.A., Begun, D.J., Strong selective sweep associated with a transposon insertion in Drosophila simulans (2004) Proceedings of the National Academy of Sciences of the United States of America, 101, pp. 1626-1631. , https://doi.org/10.1073/pnas.0303793101; Schuler, H., Köppler, K., Daxböck-Horvath, S., Rasool, B., Krumböck, S., Schwarz, D., Riegler, M., The hitchhiker's guide to Europe: The infection dynamics of an ongoing Wolbachia invasion and mitochondrial selective sweep in Rhagoletis cerasi (2016) Molecular Ecology, 25, pp. 1595-1609; Schultz, T.R., Solomon, S.A., Mueller, U.G., Villesen, P., Boomsma, J.J., Adams, R.M.M., Norden, B., Cryptic speciation in the fungus-growing ants Cyphomyrmex longiscapus Weber and Cyphomyrmex muelleri Schultz and Solomon, new species (Formicidae, Attini) (2002) Insectes Sociaux, 49, pp. 331-343. , https://doi.org/10.1007/PL00012657; Schwander, T., Arbuthnott, D., Gries, R., Gries, G., Nosil, P., Crespi, B.J., Hydrocarbon divergence and reproductive isolation in Timema stick insects (2013) BMC Evolutionary Biology, 13, p. 151. , https://doi.org/10.1186/1471-2148-13-151; Scriven, J.J., Whitehorn, P.R., Goulson, D., Tinsley, M.C., Niche partitioning in a sympatric cryptic species complex (2016) Ecology and Evolution, 6, pp. 1328-1339. , https://doi.org/10.1002/ece3.1965; Seifert, B., Removal of allometric variance improves species separation in multi-character discriminant functions when species are strongly allometric and exposes diagnostic characters (2008) Myrmecological News, 11, pp. 91-105; Servedio, M.R., Van Doorn, G.S., Kopp, M., Frame, A.M., Nosil, P., Magic traits in speciation: “magic” but not rare? (2011) Trends in Ecology & Evolution, 26, pp. 389-397; Smadja, C., Butlin, R.K., On the scent of speciation: The chemosensory system and its role in premating isolation (2009) Heredity, 102, pp. 77-97. , https://doi.org/10.1038/hdy.2008.55; Steiner, F.M., Csöcs, S., Markó, B., Gamisch, A., Rinnhofer, L., Folterbauer, C., Schlick-Steiner, B.C., Molecular phylogenetics and evolution turning one into five: Integrative taxonomy uncovers complex evolution of cryptic species in the harvester ant Messor “structor” (2018) Molecular Phylogenetics and Evolution, 127, pp. 387-404. , https://doi.org/10.1016/j.ympev.2018.04.005; Stork, N.E., How many species of insects and other terrestrial arthropods are there on earth? (2018) Annual Review of Ecology Evolution and Systematics, 63, pp. 31-45; Ströher, P.R., Li, C., Pie, M.R., Exon-primed intron-crossing (EPIC) markers as a tool for ant phylogeography (2013) Revista Brasileira de Entomologia, 57, pp. 427-430. , https://doi.org/10.1590/S0085-56262013005000039; Struck, T.H., Feder, J.L., Bendiksby, M., Birkeland, S., Cerca, J., Gusarov, V.I., Dimitrov, D., Finding evolutionary processes hidden in cryptic species (2018) Trends in Ecology & Evolution, 33, pp. 153-163. , https://doi.org/10.1016/j.tree.2017.11.007; Tajima, F., Statistical method for testing the neutral mutation hypothesis by DNA polymorphism (1989) Genetics, 123, pp. 585-595; Tamura, K., Nei, M., Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees (1993) Molecular Biology and Evolution, 10, pp. 512-526; Thibert-Plante, X., Gavrilets, S., Evolution of mate choice and the so-called magic traits in ecological speciation (2013) Ecology Letters, 16, pp. 1004-1013. , https://doi.org/10.1111/ele.12131; Thomas, M.L., Simmons, L.W., Sexual dimorphism in cuticular hydrocarbons of the Australian field cricket Teleogryllus oceanicus (Orthoptera: Gryllidae) (2008) Journal of Insect Physiology, 54, pp. 1081-1089. , https://doi.org/10.1016/j.jinsphys.2008.04.012; Thompson, J.D., Higgins, D.G., Gibson, T.J., CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice (1994) Nucleic Acids Research, 22, pp. 4673-4680. , https://doi.org/10.1093/nar/22.22.4673; Thompson, J.N., Schwind, C., Guimarães, P.R., Friberg, M., Diversification through multitrait evolution in a coevolving interaction (2013) Proceedings of the National Academy of Sciences of the United States of America, 110, pp. 11487-11492. , https://doi.org/10.1073/pnas.1307451110; Türke, M., Fiala, B., Linsenmair, K.E., Feldhaar, H., Estimation of dispersal distances of the obligately plant-associated ant Crematogaster decamera (2010) Ecological Entomology, 35, pp. 662-671. , https://doi.org/10.1111/j.1365-2311.2010.01222.x; van Wilgenburg, E., Symonds, M.R.E., Elgar, M.A., Evolution of cuticular hydrocarbon diversity in ants (2011) Journal of Evolutionary Biology, 24, pp. 1188-1198. , https://doi.org/10.1111/j.1420-9101.2011.02248.x; van Zweden, J.S., d'Ettorre, P., Nestmate recognition in social insects and the role of hydrocarbons (2010) Insect hydrocarbons: Biology, biochemistry, and chemical ecology, pp. 222-243. , G. J. Blomquist, A.-G. Bagnères, (Eds.),, New York, NY, Cambridge University Press; Vantaux, A., Dejean, A., Dor, A., Orivel, J., Parasitism versus mutualism in the ant-garden parabiosis between Camponotus femoratus and Crematogaster levior (2007) Insectes Sociaux, 54, pp. 95-99. , https://doi.org/10.1007/s00040-007-0914-0; Violle, C., Nemergut, D.R., Pu, Z., Jiang, L., Phylogenetic limiting similarity and competitive exclusion (2011) Ecology Letters, 14, pp. 782-787. , https://doi.org/10.1111/j.1461-0248.2011.01644.x; Vodă, R., Dapporto, L., Dincă, V., Vila, R., Why do cryptic species tend not to co-occur? A case study on two cryptic pairs of butterflies (2015) PLoS ONE, 10. , https://doi.org/10.1371/journal.pone.0117802; Wickham, H., (2016) ggplot2: Elegant graphics for data analysis, , 2nd ed., New York, NY, Springer-Verlag; Wolak, M.E., Fairbairn, D.J., Paulsen, Y.R., Guidelines for estimating repeatability (2012) Methods in Ecology and Evolution, 3, pp. 129-137. , https://doi.org/10.1111/j.2041-210X.2011.00125.x | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 881 | ||
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| Author | Dejean, A.; Compin, A.; Delabie, J.H.C.; Azémar, F.; Corbara, B.; Leponce, M. | ||||
| Title | Biotic and abiotic determinants of the formation of ant mosaics in primary Neotropical rainforests | Type | Journal Article | ||
| Year | 2019 | Publication | Ecological Entomology | Abbreviated Journal | Ecol Entomol |
| Volume | 44 | Issue | 4 | Pages | 560-570 |
| Keywords | Ant mosaics; connections on the ground; host tree attractiveness; indicators of disturbance; primary Neotropical rainforest; territoriality | ||||
| Abstract | 1. Ants are widespread in tropical rainforests, including in the canopy where territorially dominant arboreal species represent the main part of the arthropod biomass.
2. By mapping the territories of dominant arboreal ant species and using a null model analysis and a pairwise approach this study was able to show the presence of an ant mosaic on the upper canopy of a primary Neotropical rainforest (c. 1ha sampled; 157 tall trees from 28 families). Although Neotropical rainforest canopies are frequently irregular, with tree crowns at different heights breaking the continuity of the territories of dominant ants, the latter are preserved via underground galleries or trails laid on the ground. 3. The distribution of the trees influences the structure of the ant mosaic, something related to the attractiveness of tree taxa for certain arboreal ant species rather than others. 4. Small-scale natural disturbances, most likely strong winds in the area studied (presence of canopy gaps), play a role by favouring the presence of two ant species typical of secondary formations: Camponotus femoratus and Crematogaster levior, which live in parabiosis (i.e. share territories and nests but lodge in different cavities) and build conspicuous ant gardens. In addition, pioneer Cecropia myrmecophytic trees were recorded. |
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John Wiley & Sons, Ltd (10.1111) | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
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| ISSN | 0307-6946 | ISBN | Medium | ||
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| Notes | doi: 10.1111/een.12735 | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 882 | ||
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| Author | Clair, B.; Ghislain, B.; Prunier, J.; Lehnebach, R.; Beauchene, J.; Alméras, T. | ||||
| Title | Mechanical contribution of secondary phloem to postural control in trees: the bark side of the force | Type | Journal Article | ||
| Year | 2019 | Publication | New Phytologist | Abbreviated Journal | New Phytol |
| Volume | 221 | Issue | 1 | Pages | 209-217 |
| Keywords | bark; Malvaceae; maturation stress; secondary phloem; tree biomechanics | ||||
| Abstract | Summary To grow straight, plants need a motor system that controls posture by generating forces to offset gravity. This motor function in trees was long thought to be only controlled by internal forces induced in wood. Here we provide evidence that bark is involved in the generation of mechanical stresses in several tree species. Saplings of nine tropical species were grown tilted and staked in a shadehouse and the change in curvature of the stem was measured after releasing from the pole and after removing the bark. This first experiment evidenced the contribution of bark in the up-righting movement of tree stems. Combined mechanical measurements of released strains on adult trees and microstructural observations in both transverse and longitudinal/tangential plane enabled us to identify the mechanism responsible for the development of asymmetric mechanical stress in the bark of stems of these species. This mechanism does not result from cell wall maturation like in wood, or from the direct action of turgor pressure like in unlignified organs, but is the consequence of the interaction between wood radial pressure and a smartly organized trellis structure in the inner bark. | ||||
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| Corporate Author | Thesis | ||||
| Publisher |
John Wiley & Sons, Ltd (10.1111) | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 0028-646x | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | doi: 10.1111/nph.15375 | Approved | no | ||
| Call Number | EcoFoG @ webmaster @ | Serial | 853 | ||
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| Author | Zinger, L.; Taberlet, P.; Schimann, H.; Bonin, A.; Boyer, F.; De Barba, M.; Gaucher, P.; Gielly, L.; Giguet-Covex, C.; Iribar, A.; Réjou-Méchain, M.; Rayé, G.; Rioux, D.; Schilling, V.; Tymen, B.; Viers, J.; Zouiten, C.; Thuiller, W.; Coissac, E.; Chave, J. | ||||
| Title | Body size determines soil community assembly in a tropical forest | Type | Journal Article | ||
| Year | 2019 | Publication | Molecular Ecology | Abbreviated Journal | Mol Ecol |
| Volume | 28 | Issue | 3 | Pages | 528-543 |
| Keywords | DNA metabarcoding; eDNA; French Guiana; multitaxa; neutral assembly; niche determinism; propagule size; soil diversity | ||||
| Abstract | Tropical forests shelter an unparalleled biological diversity. The relative influence of environmental selection (i.e., abiotic conditions, biotic interactions) and stochastic?distance-dependent neutral processes (i.e., demography, dispersal) in shaping communities has been extensively studied for various organisms, but has rarely been explored across a large range of body sizes, in particular in soil environments. We built a detailed census of the whole soil biota in a 12-ha tropical forest plot using soil DNA metabarcoding. We show that the distribution of 19 taxonomic groups (ranging from microbes to mesofauna) is primarily stochastic, suggesting that neutral processes are prominent drivers of the assembly of these communities at this scale. We also identify aluminium, topography and plant species identity as weak, yet significant drivers of soil richness and community composition of bacteria, protists and to a lesser extent fungi. Finally, we show that body size, which determines the scale at which an organism perceives its environment, predicted the community assembly across taxonomic groups, with soil mesofauna assemblages being more stochastic than microbial ones. These results suggest that the relative contribution of neutral processes and environmental selection to community assembly directly depends on body size. Body size is hence an important determinant of community assembly rules at the scale of the ecological community in tropical soils and should be accounted for in spatial models of tropical soil food webs. | ||||
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| Corporate Author | Thesis | ||||
| Publisher |
John Wiley & Sons, Ltd (10.1111) | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 0962-1083 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 873 | ||
| Permanent link to this record | |||||
| Author | Piponiot, C.; Rödig, E.; Putz, F.E.; Rutishauser, E.; Sist, P.; Ascarrunz, N.; Blanc, L.; Derroire, G.; Descroix, L.; Guedes, M.C.; Coronado, E.H.; Huth, A.; Kanashiro, M.; Licona, J.C.; Mazzei, L.; d’Oliveira, M.V.N.; Peña-Claros, M.; Rodney, K.; Shenkin, A.; de Souza, C.R.; Vidal, E.; West, T.A.P.; Wortel, V.; Herault, B. | ||||
| Title | Can timber provision from Amazonian production forests be sustainable? | Type | Journal Article | ||
| Year | 2019 | Publication | Environmental Research Letters | Abbreviated Journal | Environmental Research Letters |
| Volume | 14 | Issue | 6 | Pages | 064014 |
| Keywords | |||||
| Abstract | Around 30 Mm3 of sawlogs are extracted annually by selective logging of natural production forests in Amazonia, Earth’s most extensive tropical forest. Decisions concerning the management of these production forests will be of major importance for Amazonian forests’ fate. To date, no regional assessment of selective logging sustainability supports decision-making. Based on data from 3500 ha of forest inventory plots, our modelling results show that the average periodic harvests of 20 m3 ha−1 will not recover by the end of a standard 30 year cutting cycle. Timber recovery within a cutting cycle is enhanced by commercial acceptance of more species and with the adoption of longer cutting cycles and lower logging intensities. Recovery rates are faster in Western Amazonia than on the Guiana Shield. Our simulations suggest that regardless of cutting cycle duration and logging intensities, selectively logged forests are unlikely to meet timber demands over the long term as timber stocks are predicted to steadily decline. There is thus an urgent need to develop an integrated forest resource management policy that combines active management of production forests with the restoration of degraded and secondary forests for timber production. Without better management, reduced timber harvests and continued timber production declines are unavoidable. | ||||
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| Corporate Author | Thesis | ||||
| Publisher |
IOP Publishing | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 1748-9326 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 875 | ||
| Permanent link to this record | |||||
| Author | Piponiot, C.; Rutishauser, E.; Derroire, G.; Putz, F.E.; Sist, P.; West, T.A.P.; Descroix, L.; Guedes, M.C.; Coronado, E.N.H.; Kanashiro, M.; Mazzei, L.; d’Oliveira, M.V.N.; Peña-Claros, M.; Rodney, K.; Ruschel, A.R.; Souza, C.R. de; Vidal, E.; Wortel, V.; Hérault, B. | ||||
| Title | Optimal strategies for ecosystem services provision in Amazonian production forests | Type | Journal Article | ||
| Year | 2019 | Publication | Environmental Research Letters | Abbreviated Journal | |
| Volume | 14 | Issue | 12 | Pages | 124090 |
| Keywords | |||||
| Abstract | Although tropical forests harbour most of the terrestrial carbon and biological diversity on Earth they continue to be deforested or degraded at high rates. In Amazonia, the largest tropical forest on Earth, a sixth of the remaining natural forests is formally dedicated to timber extraction through selective logging. Reconciling timber extraction with the provision of other ecosystem services (ES) remains a major challenge for forest managers and policy-makers. This study applies a spatial optimisation of logging in Amazonian production forests to analyse potential trade-offs between timber extraction and recovery, carbon storage, and biodiversity conservation. Current logging regulations with unique cutting cycles result in sub-optimal ES-use efficiency. Long-term timber provision would require the adoption of a land-sharing strategy that involves extensive low-intensity logging, although high transport and road-building costs might make this approach economically unattractive. By contrast, retention of carbon and biodiversity would be enhanced by a land-sparing strategy restricting high-intensive logging to designated areas such as the outer fringes of the region. Depending on management goals and societal demands, either choice will substantially influence the future of Amazonian forests. Overall, our results highlight the need for revaluation of current logging regulations and regional cooperation among Amazonian countries to enhance coherent and trans-boundary forest management. | ||||
| Address | |||||
| Corporate Author | Thesis | ||||
| Publisher |
IOP Publishing | Place of Publication | Editor | ||
| Language | Summary Language | Original Title | |||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 1748-9326 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Notes | Approved | no | |||
| Call Number | EcoFoG @ webmaster @ | Serial | 910 | ||
| Permanent link to this record | |||||