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Caron, H., Molino, J. - F., Sabatier, D., Léger, P., Chaumeil, P., Scotti-Saintagne, C., et al. (2019). Chloroplast DNA variation in a hyperdiverse tropical tree community. Ecology and Evolution, 9(8), 4897–4905.
Abstract: We investigate chloroplast DNA variation in a hyperdiverse community of tropical rainforest trees in French Guiana, focusing on patterns of intraspecific and interspecific variation. We test whether a species genetic diversity is higher when it has congeners in the community with which it can exchange genes and if shared haplotypes are more frequent in genetically diverse species, as expected in the presence of introgression. We sampled a total of 1,681 individual trees from 472 species corresponding to 198 genera and sequenced them at a noncoding chloroplast DNA fragment. Polymorphism was more frequent in species that have congeneric species in the study site than in those without congeners (30% vs. 12%). Moreover, more chloroplast haplotypes were shared with congeners in polymorphic species than in monomorphic ones (44% vs. 28%). Despite large heterogeneities caused by genus-specific behaviors in patterns of hybridization, these results suggest that the higher polymorphism in the presence of congeners is caused by local introgression rather than by incomplete lineage sorting. Our findings suggest that introgression has the potential to drive intraspecific genetic diversity in species-rich tropical forests.
Keywords: chloroplast DNA; DNA barcoding; genetic diversity; hybridization; incomplete lineage sorting; introgression; species diversity; tropical trees
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Hartke, J., Sprenger, P. P., Sahm, J., Winterberg, H., Orivel, J., Baur, H., et al. (2019). Cuticular hydrocarbons as potential mediators of cryptic species divergence in a mutualistic ant association. Ecology and Evolution, 9(16), 9160–9176.
Abstract: Upon advances in sequencing techniques, more and more morphologically identical organisms are identified as cryptic species. Often, mutualistic interactions are proposed as drivers of diversification. Species of the neotropical parabiotic ant association between Crematogaster levior and Camponotus femoratus are known for highly diverse cuticular hydrocarbon (CHC) profiles, which in insects serve as desiccation barrier but also as communication cues. In the present study, we investigated the association of the ants’ CHC profiles with genotypes and morphological traits, and discovered cryptic species pairs in both genera. To assess putative niche differentiation between the cryptic species, we conducted an environmental association study that included various climate variables, canopy cover, and mutualistic plant species. Although mostly sympatric, the two Camponotus species seem to prefer different climate niches. However in the two Crematogaster species, we could not detect any differences in niche preference. The strong differentiation in the CHC profiles may thus suggest a possible role during speciation itself either by inducing assortative mating or by reinforcing sexual selection after the speciation event. We did not detect any further niche differences in the environmental parameters tested. Thus, it remains open how the cryptic species avoid competitive exclusion, with scope for further investigations. © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
Keywords: environmental association; integrative taxonomy; niche differentiation; population structure; sexual selection; speciation
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Denis, T., Richard-Hansen, C., Brunaux, O., Guitet, S., & Hérault, B. (2019). Birds of a feather flock together: Functionally similar vertebrates positively co-occur in Guianan forests. Ecosphere, 10(3), e02566.
Abstract: Medium- and large-sized vertebrates play a key role in shaping overall forest functioning. Despite this, vertebrate interactions, from competition to mutualism, remain poorly studied, even though these interactions should be taken into account in our conservation and management strategies. Thus, we tackled the question of vertebrate co-occurrence in tropical rainforests: Are (negative or positive) co-occurrences dependent on forest structure and composition? and Are these co-occurrences linked to functional species similarity? We recorded the occurrence of 21 medium- and large-sized vertebrates in 19 French Guianan locations in which a large set of forest structure and composition descriptors were collected. We used a probabilistic model to look for co-occurrences at different spatial scales, and species pairwise co-occurrences were then compared to those generated solely on the basis of forest structure and composition. We then quantified the co-occurrence strength between pairwise species dyads and determined whether they relied on species functional similarity, controlling for the environmental effects. We found that positive co-occurrences vastly outnumbered negative co-occurrences, were only partly shaped by the local environment, and were closely linked to species functional similarity. Thus, groups of species sharing similar functional traits are more prone to co-occur, highlighting the key role of functional redundancy in structuring species assemblages. We discuss how positive interactions could generate the predominance of positive co-occurrences in oligotrophic terra firme (unflooded) forests when resources are scarce and dispersed in dry season. Finally, we identified functional groups based on co-occurrence strength and suggested that frugivory/granivory and body size are of primary importance in species interactions in Neotropical vertebrate communities. © 2019 The Authors.
Keywords: activity matching; birds; Guiana Shield; information exchange; mammals; mixed-species associations; mutualism; terra firme rainforests
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Leroy, C., Gril, E., Si Ouali, L., Coste, S., Gérard, B., Maillard, P., et al. (2019). Water and nutrient uptake capacity of leaf-absorbing trichomes vs. roots in epiphytic tank bromeliads. Environ. Exp. Bot., 163, 112–123.
Abstract: The water and nutrient uptake mechanisms used by vascular epiphytes have been the subject of a few studies. While leaf absorbing trichomes (LATs) are the main organ involved in resource uptake by bromeliads, little attention has been paid to the absorbing role of epiphytic bromeliad roots. This study investigates the water and nutrient uptake capacity of LATs vs. roots in two epiphytic tank bromeliads Aechmea aquilega and Lutheria splendens. The tank and/or the roots of bromeliads were watered, or not watered at all, in different treatments. We show that LATs and roots have different functions in resource uptake in the two species, which we mainly attributed to dissimilarities in carbon acquisition and growth traits (e.g., photosynthesis, relative growth rate, non-structural carbohydrates, malate), to water relation traits (e.g., water and osmotic potentials, relative water content, hydrenchyma thickness) and nutrient uptake (e.g., 15 N-labelling). While the roots of A. aquilega did contribute to water and nutrient uptake, the roots of L. splendens were less important than the role played by the LATs in resource uptake. We also provide evidenced for a synergistic effect of combined watering of tank and root in the Bromelioideae species. These results call for a more complex interpretation of LATs vs. roots in resource uptake in bromeliads. © 2019 Elsevier B.V.
Keywords: 15 N labelling; Carbon metabolism; Nutrient uptake; Plant performance; Tank bromeliad; Water status; Aechmea
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Prunier, J., Maurice, L., Perez, E., Gigault, J., Pierson Wickmann, A. - C., Davranche, M., et al. (2019). Trace metals in polyethylene debris from the North Atlantic subtropical gyre. Environ. Pollut., 245, 371–379.
Abstract: Plastic pollution in the marine environment poses threats to wildlife and habitats through varied mechanisms, among which are the transport and transfer to the food web of hazardous substances. Still, very little is known about the metal content of plastic debris and about sorption/desorption processes, especially with respect to weathering. In this study, plastic debris collected from the North Atlantic subtropical gyre was analyzed for trace metals; as a comparison, new packaging materials were also analyzed. Both the new items and plastic debris showed very scattered concentrations. The new items contained significant amounts of trace metals introduced as additives, but globally, metal concentrations were higher in the plastic debris. The results provide evidence that enhanced metal concentrations increase with the plastic state of oxidation for some elements, such as As, Ti, Ni, and Cd. Transmission electron microscopy showed the presence of mineral particles on the surface of the plastic debris. This work demonstrates that marine plastic debris carries complex mixtures of heavy metals. Such materials not only behave as a source of metals resulting from intrinsic plastic additives but also are able to concentrate metals from ocean water as mineral nanoparticles or adsorbed species. Plastic debris collected from the North Atlantic subtropical gyre was analyzed for trace metals. Marine plastic debris carry complex mixtures of heavy metals but it is evidence that plastic oxidation favors their adsorption.
Keywords: metals'accumulation; Microplastic; Plastic debris; Polyethylene; Polymer
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Piponiot, C., Rödig, E., Putz, F. E., Rutishauser, E., Sist, P., Ascarrunz, N., et al. (2019). Can timber provision from Amazonian production forests be sustainable? Environmental Research Letters, 14(6), 064014.
Abstract: Around 30 Mm3 of sawlogs are extracted annually by selective logging of natural production forests in Amazonia, Earth’s most extensive tropical forest. Decisions concerning the management of these production forests will be of major importance for Amazonian forests’ fate. To date, no regional assessment of selective logging sustainability supports decision-making. Based on data from 3500 ha of forest inventory plots, our modelling results show that the average periodic harvests of 20 m3 ha−1 will not recover by the end of a standard 30 year cutting cycle. Timber recovery within a cutting cycle is enhanced by commercial acceptance of more species and with the adoption of longer cutting cycles and lower logging intensities. Recovery rates are faster in Western Amazonia than on the Guiana Shield. Our simulations suggest that regardless of cutting cycle duration and logging intensities, selectively logged forests are unlikely to meet timber demands over the long term as timber stocks are predicted to steadily decline. There is thus an urgent need to develop an integrated forest resource management policy that combines active management of production forests with the restoration of degraded and secondary forests for timber production. Without better management, reduced timber harvests and continued timber production declines are unavoidable.
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Piponiot, C., Rutishauser, E., Derroire, G., Putz, F. E., Sist, P., West, T. A. P., et al. (2019). Optimal strategies for ecosystem services provision in Amazonian production forests. Environmental Research Letters, 14(12), 124090.
Abstract: Although tropical forests harbour most of the terrestrial carbon and biological diversity on Earth they continue to be deforested or degraded at high rates. In Amazonia, the largest tropical forest on Earth, a sixth of the remaining natural forests is formally dedicated to timber extraction through selective logging. Reconciling timber extraction with the provision of other ecosystem services (ES) remains a major challenge for forest managers and policy-makers. This study applies a spatial optimisation of logging in Amazonian production forests to analyse potential trade-offs between timber extraction and recovery, carbon storage, and biodiversity conservation. Current logging regulations with unique cutting cycles result in sub-optimal ES-use efficiency. Long-term timber provision would require the adoption of a land-sharing strategy that involves extensive low-intensity logging, although high transport and road-building costs might make this approach economically unattractive. By contrast, retention of carbon and biodiversity would be enhanced by a land-sparing strategy restricting high-intensive logging to designated areas such as the outer fringes of the region. Depending on management goals and societal demands, either choice will substantially influence the future of Amazonian forests. Overall, our results highlight the need for revaluation of current logging regulations and regional cooperation among Amazonian countries to enhance coherent and trans-boundary forest management.
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N'Guessan, A. E., N'dja, J. K., Yao, O. N., Amani, B. H. K., Gouli, R. G. Z., Piponiot, C., et al. (2019). Drivers of biomass recovery in a secondary forested landscape of West Africa. Forest Ecology and Management, 433, 325–331.
Abstract: The rapidly growing human population in West Africa has generated increasing demand for agricultural land and forest products. Consequently 90% of the original rainforest cover has now disappeared and the remainder is heavily fragmented and highly degraded. Although many studies have focused on carbon stocks and fluxes in intact African forests, little information exists on biomass recovery rates in secondary forests. We studied a chronosequence of 96 secondary and old-growth forest fragments (0.2 ha each) where 32.103 trees with Diameter at Breast Height > 2.5 cm have been censused. We modelled the biomass recovery trajectories in a time-explicit Bayesian framework and tested the effect on recovery rates of a large set of covariates related to the physical environment, plot history, and forest connectivity. Recovery rate trajectory is highly non-linear: recovery rates accelerated from 1 to 37 years, when biomass recovery reached 4.23 Mg /ha /yr, and decelerated afterwards. We predict that, on average, 10%, 25% and 50% of the old-growth forest biomass is respectively recovered 17, 30, and 51 years after abandonment. Recovery rates are strongly shaped by both the number of remnant trees (residuals of the former old-growth forest) and the previous crop cultivated before abandonment. The latter induced large differences in the time needed to recover 50% of an old-growth forest biomass: from 38 years for former Yam fields up to 86 years for former rice fields. Our results emphasize (i) the very slow recovery rates of West African forests, as compared to Neotropical forests (ii) the long-lasting impacts of past human activities and management choices on ecosystem biomass recovery in West African degraded forests.
Keywords: Biomass; Cultivation; Ecology; Recovery; Secondary recovery; Agricultural land; Bayesian frameworks; Diameter-at-breast heights; Forested landscapes; Neotropical forests; Old-growth forest; Physical environments; Secondary forests; Forestry; Dioscorea alata
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Yguel, B., Piponiot, C., Mirabel, A., Dourdain, A., Hérault, B., Gourlet-Fleury, S., et al. (2019). Beyond species richness and biomass: Impact of selective logging and silvicultural treatments on the functional composition of a neotropical forest. Forest Ecology and Management, 433, 528–534.
Abstract: Tropical forests harbor the greatest terrestrial biodiversity and provide various ecosystem services. The increase of human activities on these forests, among which logging, makes the conservation of biodiversity and associated services strongly dependent on the sustainability of these activities. However the indicators commonly used to assess the impact of forest exploitation, namely species richness and biomass, provide a limited understanding of their sustainability. Here, we assessed the sustainability of common forest exploitation in the Guiana Shield studying the recovery of two ecosystem services i.e. carbon storage and wood stock, and an ecosystem function i.e. seed dispersal by animals. Specifically, we compared total and commercial biomass, as well as functional composition in seed size of animal-dispersed species in replicated forest plots before and 27 years after exploitation. Species richness is also studied to allow comparison. While species richness was not affected by forest exploitation, total and commercial biomass as well as seed size of animal-dispersed species decreased 27 years after exploitation, similarly to forests affected by hunting. These results show that ecosystem services and function likely did not recover even at the lowest intensity of forest exploitation studied, questioning the sustainability of the most common rotation-cycle duration applied in the tropics.
Keywords: Selective logging; Humid tropical forest; Functional composition; Seed dispersal; Carbon storage; Commercial stock; Anthropogenic pressure; Sustainability
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Lehnebach, R., Bossu, J., Va, S., Morel, H., Amusant, N., Nicolini, E., et al. (2019). Wood density variations of legume trees in French Guiana along the shade tolerance continuum: Heartwood effects on radial patterns and gradients. Forests, 10(2).
Abstract: Increasing or decreasing wood density (WD) from pith to bark is commonly observed in tropical tree species. The different types of WD radial variations, long been considered to depict the diversity of growth and mechanical strategies among forest guilds (heliophilic vs. shade-tolerant), were never analyzed in the light of heartwood (HW) formation. Yet, the additional mass of chemical extractives associated to HW formation increases WD and might affect both WD radial gradient (i.e., the slope of the relation between WD and radial distance) and pattern (i.e., linear or nonlinear variation). We studied 16 legumes species from French Guiana representing a wide diversity of growth strategies and positions on the shade-tolerance continuum. Using WD measurements and available HW extractives content values, we computed WD corrected by the extractive content and analyzed the effect of HW on WD radial gradients and patterns. We also related WD variations to demographic variables, such as sapling growth and mortality rates. Regardless of the position along the shade-tolerance continuum, correcting WD gradients reveals only increasing gradients. We determined three types of corrected WD patterns: (1) the upward curvilinear pattern is a specific feature of heliophilic species, whereas (2) the linear and (3) the downward curvilinear patterns are observed in both mid- and late-successional species. In addition, we found that saplings growth and mortality rates are better correlated with the corrected WD at stem center than with the uncorrected value: taking into account the effect of HW extractives on WD radial variations provides unbiased interpretation of biomass accumulation and tree mechanical strategies. Rather than a specific feature of heliophilic species, the increasing WD gradient is a shared strategy regardless of the shade tolerance habit. Finally, our study stresses to consider the occurrence of HW when using WD.
Keywords: French Guiana; Growth-mortality rate; Heartwood; Heartwood extractives; Legumes; Sapwood; Shade tolerance; Tropical tree species; Wood density variations
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