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Fu, T.; Houel, E.; Amusant, N.; Touboul, D.; Genta-Jouve, G.; Della-Negra, S.; Fisher, G.L.; Brunelle, A.; Duplais, C. |
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Title |
Biosynthetic investigation of γ-lactones in Sextonia rubra wood using in situ TOF-SIMS MS/MS imaging to localize and characterize biosynthetic intermediates |
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Journal Article |
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Year |
2019 |
Publication |
Scientific Reports |
Abbreviated Journal |
Sci. Rep. |
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9 |
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1928 |
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Molecular analysis by parallel tandem mass spectrometry (MS/MS) imaging contributes to the in situ characterization of biosynthetic intermediates which is crucial for deciphering the metabolic pathways in living organisms. We report the first use of TOF-SIMS MS/MS imaging for the cellular localization and characterization of biosynthetic intermediates of bioactive γ-lactones rubrynolide and rubrenolide in the Amazonian tree Sextonia rubra (Lauraceae). Five γ-lactones, including previously reported rubrynolide and rubrenolide, were isolated using a conventional approach and their structural characterization and localization at a lateral resolution of ~400 nm was later achieved using TOF-SIMS MS/MS imaging analysis. 2D/3D MS imaging at subcellular level reveals that putative biosynthetic γ-lactones intermediates are localized in the same cell types (ray parenchyma cells and oil cells) as rubrynolide and rubrenolide. Consequently, a revised metabolic pathway of rubrynolide was proposed, which involves the reaction between 2-hydroxysuccinic acid and 3-oxotetradecanoic acid, contrary to previous studies suggesting a single polyketide precursor. Our results provide insights into plant metabolite production in wood tissues and, overall, demonstrate that combining high spatial resolution TOF-SIMS imaging and MS/MS structural characterization offers new opportunities for studying molecular and cellular biochemistry in plants. © 2019, The Author(s). |
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Physical Electronics, Chanhassen, MN 55317, United States |
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Nature Publishing Group |
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20452322 (Issn) |
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EcoFoG @ webmaster @ |
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866 |
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Leponce, M.;Delabie, J.H.C.;Orivel, J.;Jacquemin, J.;Calvo Martin, M.;Dejean, A. |
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Tree-dwelling ant survey (Hymenoptera, Formicidae) in Mitaraka, French Guiana |
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Journal Article |
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Year |
2019 |
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Zoosystema |
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40 |
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sp1 |
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163-179 |
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Ants constitute a substantial part of the arthropod biomass in rainforests. Most studies have focused on ground-dwelling ants, which constitute almost half of the diversity of the ant assemblage. We report here the results of the first survey of tree-dwelling ants in French Guiana on a plateau and in a swamp palm forest (Euterpe oleracea Mart.) in the Mitaraka Mountains. We were interested in seeing the effect of topography and geographic distance on species richness and composition and to gather information on the species distribution on tree trunks. The fauna of Mitaraka was compared with one from a site 350 km distant (Petit Saut). In total 105 trees were sampled (30, 30, 45 in the plateau and the swamp forests of Mitaraka, and in Petit Saut plateau forest, respectively). Arboreal ants were attracted using tuna and honey baits spread along a rope reaching an upper branch, except for the palm swamp forest where the baits were only placed at 2 m high. A total of 34, 13 and 22 species were observed in these three respective sites. Six of these species are new records for French Guiana. In Mitaraka Camponotus femoratus (Fabricius, 1804) and Crematogaster leviorLongino, 2003 co-occurred on trees (parabiotic association) and were among the most common species, along with Crematogaster tenuiculaForel, 1904 which was found on other trees (species exclusion). The Mitaraka Mountains appeared more species rich and had a species composition distinct from Petit Saut. Topography also influenced ant species composition. Almost half of the species collected by the baitline method were exclusively foraging in the canopy. |
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EcoFoG @ webmaster @ |
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883 |
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Peguero, G.; Sardans, J.; Asensio, D.; Fernández-Martínez, M.; Gargallo-Garriga, A.; Grau, O.; Llusià, J.; Margalef, O.; Márquez, L.; Ogaya, R.; Urbina, I.; Courtois, E.A.; Stahl, C.; Van Langenhove, L.; Verryckt, L.T.; Richter, A.; Janssens, I.A.; Peñuelas, J. |
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Nutrient scarcity strengthens soil fauna control over leaf litter decomposition in tropical rainforests |
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Journal Article |
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Year |
2019 |
Publication |
Proceedings. Biological sciences |
Abbreviated Journal |
Proc. Biol. Sci. |
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286 |
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1910 |
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20191300 |
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biogeochemistry; extracellular enzyme activity; litter decomposition; nutrients; soil fauna |
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Soil fauna is a key control of the decomposition rate of leaf litter, yet its interactions with litter quality and the soil environment remain elusive. We conducted a litter decomposition experiment across different topographic levels within the landscape replicated in two rainforest sites providing natural gradients in soil fertility to test the hypothesis that low nutrient availability in litter and soil increases the strength of fauna control over litter decomposition. We crossed these data with a large dataset of 44 variables characterizing the biotic and abiotic microenvironment of each sampling point and found that microbe-driven carbon (C) and nitrogen (N) losses from leaf litter were 10.1 and 17.9% lower, respectively, in the nutrient-poorest site, but this among-site difference was equalized when meso- and macrofauna had access to the litterbags. Further, on average, soil fauna enhanced the rate of litter decomposition by 22.6%, and this contribution consistently increased as nutrient availability in the microenvironment declined. Our results indicate that nutrient scarcity increases the importance of soil fauna on C and N cycling in tropical rainforests. Further, soil fauna is able to equalize differences in microbial decomposition potential, thus buffering to a remarkable extent nutrient shortages at an ecosystem level. |
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Department of Microbiology and Ecosystem Science, University of Vienna, Vienna, 1090, Austria |
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NLM (Medline) |
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14712954 (Issn) |
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EcoFoG @ webmaster @ |
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884 |
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Talaga, S.; Dejean, A.; Mouza, C.; Dumont, Y.; Leroy, C. |
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Larval interference competition between the native Neotropical mosquito Limatus durhamii and the invasive Aedes aegypti improves the fitness of both species |
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Journal Article |
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2018 |
Publication |
Insect Science |
Abbreviated Journal |
Insect Science |
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25 |
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1102-1107 |
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Aedes aegypti; increased fitness; interference competition; Limatus durhamii; phenotypic plasticity; resistance to invasion |
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Abstract Interspecific competition with native species during biological invasions can sometimes limit alien expansion. We aimed to determine the potential ecological effects of Limatus durhamii Theobald 1901, a native Neotropical mosquito (Diptera: Culicidae) species, on the invasive species Aedes (Stegomyia) aegypti (Linnaeus 1762) that breeds in the same artificial water containers. Development time and adult dry mass were measured in 3 rearing conditions: control (a single larva), intraspecific competition (2 conspecific larvae), and interspecific competition (2 heterospecific larvae). Food was provided ad libitum to eliminate exploitative competition. For Ae. aegypti, development time was not affected by interspecific interference competition (nonsignificant differences with the control) and the adult dry mass was significantly higher, meaning that individual fitness likely increased. Yet, because previous studies showed longer development time and lighter adults during competition with other invasive mosquitoes, it is likely that Ae. aegypti can express a different phenotype depending on the competing species. The similar pattern found for Li. durhamii females and the nonsignificant difference with the control for males explain in part why this species can compete with Ae. aegypti. |
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John Wiley & Sons, Ltd (10.1111) |
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1672-9609 |
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EcoFoG @ webmaster @ |
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836 |
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Dezecache, C.; Salles, J.-M.; Herault, B. |
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Questioning emissions-based approaches for the definition of REDD+ deforestation baselines in high forest cover/low deforestation countries |
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Journal Article |
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2018 |
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Carbon Balance Manage. |
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13 |
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21 |
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Baseline; Deforestation; Guiana Shield; HFLD countries; Redd+; Reference level; Spatial modelling |
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Background: REDD+ is being questioned by the particular status of High Forest/Low Deforestation countries. Indeed, the formulation of reference levels is made difficult by the confrontation of low historical deforestation records with the forest transition theory on the one hand. On the other hand, those countries might formulate incredibly high deforestation scenarios to ensure large payments even in case of inaction. Results: Using a wide range of scenarios within the Guiana Shield, from methods involving basic assumptions made from past deforestation, to explicit modelling of deforestation using relevant socio-economic variables at the regional scale, we show that the most common methodologies predict huge increases in deforestation, unlikely to happen given the existing socio-economic situation. More importantly, it is unlikely that funds provided under most of these scenarios could compensate for the total cost of avoided deforestation in the region, including social and economic costs. Conclusion: This study suggests that a useful and efficient international mechanism should really focus on removing the underlying political and socio-economic forces of deforestation rather than on hypothetical result-based payments estimated from very questionable reference levels. |
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BioMed Central Ltd. |
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17500680 (Issn) |
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EcoFoG @ webmaster @ |
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837 |
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N'Guessan, A.E.; N'dja, J.K.; Yao, O.N.; Amani, B.H.K.; Gouli, R.G.Z.; Piponiot, C.; Zo-Bi, I.C.; Herault, B. |
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Drivers of biomass recovery in a secondary forested landscape of West Africa |
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Journal Article |
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2019 |
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Forest Ecology and Management |
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433 |
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325-331 |
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Biomass; Cultivation; Ecology; Recovery; Secondary recovery; Agricultural land; Bayesian frameworks; Diameter-at-breast heights; Forested landscapes; Neotropical forests; Old-growth forest; Physical environments; Secondary forests; Forestry; Dioscorea alata |
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The rapidly growing human population in West Africa has generated increasing demand for agricultural land and forest products. Consequently 90% of the original rainforest cover has now disappeared and the remainder is heavily fragmented and highly degraded. Although many studies have focused on carbon stocks and fluxes in intact African forests, little information exists on biomass recovery rates in secondary forests. We studied a chronosequence of 96 secondary and old-growth forest fragments (0.2 ha each) where 32.103 trees with Diameter at Breast Height > 2.5 cm have been censused. We modelled the biomass recovery trajectories in a time-explicit Bayesian framework and tested the effect on recovery rates of a large set of covariates related to the physical environment, plot history, and forest connectivity. Recovery rate trajectory is highly non-linear: recovery rates accelerated from 1 to 37 years, when biomass recovery reached 4.23 Mg /ha /yr, and decelerated afterwards. We predict that, on average, 10%, 25% and 50% of the old-growth forest biomass is respectively recovered 17, 30, and 51 years after abandonment. Recovery rates are strongly shaped by both the number of remnant trees (residuals of the former old-growth forest) and the previous crop cultivated before abandonment. The latter induced large differences in the time needed to recover 50% of an old-growth forest biomass: from 38 years for former Yam fields up to 86 years for former rice fields. Our results emphasize (i) the very slow recovery rates of West African forests, as compared to Neotropical forests (ii) the long-lasting impacts of past human activities and management choices on ecosystem biomass recovery in West African degraded forests. |
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Elsevier B.V. |
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03781127 (Issn) |
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EcoFoG @ webmaster @ |
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838 |
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Yguel, B.; Piponiot, C.; Mirabel, A.; Dourdain, A.; Hérault, B.; Gourlet-Fleury, S.; Forget, P.-M.; Fontaine, C. |
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Beyond species richness and biomass: Impact of selective logging and silvicultural treatments on the functional composition of a neotropical forest |
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Journal Article |
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Year |
2019 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
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433 |
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528-534 |
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Selective logging; Humid tropical forest; Functional composition; Seed dispersal; Carbon storage; Commercial stock; Anthropogenic pressure; Sustainability |
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Tropical forests harbor the greatest terrestrial biodiversity and provide various ecosystem services. The increase of human activities on these forests, among which logging, makes the conservation of biodiversity and associated services strongly dependent on the sustainability of these activities. However the indicators commonly used to assess the impact of forest exploitation, namely species richness and biomass, provide a limited understanding of their sustainability. Here, we assessed the sustainability of common forest exploitation in the Guiana Shield studying the recovery of two ecosystem services i.e. carbon storage and wood stock, and an ecosystem function i.e. seed dispersal by animals. Specifically, we compared total and commercial biomass, as well as functional composition in seed size of animal-dispersed species in replicated forest plots before and 27 years after exploitation. Species richness is also studied to allow comparison. While species richness was not affected by forest exploitation, total and commercial biomass as well as seed size of animal-dispersed species decreased 27 years after exploitation, similarly to forests affected by hunting. These results show that ecosystem services and function likely did not recover even at the lowest intensity of forest exploitation studied, questioning the sustainability of the most common rotation-cycle duration applied in the tropics. |
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0378-1127 |
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EcoFoG @ webmaster @ |
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839 |
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Céréghino, R.; Corbara, B.; Hénaut, Y.; Bonhomme, C.; Compin, A.; Dejean, A. |
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Ant and spider species as surrogates for functional community composition of epiphyte-associated invertebrates in a tropical moist forest |
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Journal Article |
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2019 |
Publication |
Ecological Indicators |
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96 |
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694-700 |
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Functional traits; Indicator species; Phytotelmata; Rainforests; Surrogacy; Tank bromeliads |
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Epiphytes represent up to 50% of all plant species in rainforests, where they host a substantial amount of invertebrate biomass. Efficient surrogates for epiphyte invertebrate communities could reduce the cost of biomonitoring surveys while preventing destructive sampling of the plants. Here, we focus on the invertebrate communities associated to tank bromeliads. We ask whether the presence of particular ant and/or spider taxa (easily surveyed taxa) that use these plants as nesting and/or foraging habitats predicts functional trait combinations of aquatic invertebrate communities hosted by the plants. Functional community composition of invertebrates was predicted both by bromeliad habitat features and the presence of certain ant and spider species. The ant Azteca serica preferred wider bromeliad rosettes that trap large amount of detritus, indicating interstitial-like food webs dominated by deposit feeders that burrow in fine particulate organic matter. Leucauge sp. spiders preferred narrower bromeliad rosettes bearing smaller detrital loads, thereby indicating a dominance of pelagic filter-feeding and predatory invertebrates in the water-filled leaf axils. Both Neoponera villosa ants and Eriophora sp. spiders preferred rosettes at intermediate size bearing moderate amounts of detritus, indicating a benthic food web dominated by leaf shredders and gathering collectors. Owing to the animal diversity and biomass supported by rainforest epiphytes, our approach would deserve to be further tested on a range of epiphytes involved in tight interactions with invertebrates. In this context, surrogate species could serve both as indicators of functional diversity, and as early-warning indicators of network disassembly. |
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1470-160x |
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EcoFoG @ webmaster @ |
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841 |
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Bruelheide, H.; Dengler, J.; Purschke, O.; Lenoir, J.; Jiménez-Alfaro, B.; Hennekens, S.M.; Botta-Dukát, Z.; Chytrý, M.; Field, R.; Jansen, F.; Kattge, J.; Pillar, V.D.; Schrodt, F.; Mahecha, M.D.; Peet, R.K.; Sandel, B.; van Bodegom, P.; Altman, J.; Alvarez-Dávila, E.; Arfin Khan, M.A.S.; Attorre, F.; Aubin, I.; Baraloto, C.; Barroso, J.G.; Bauters, M.; Bergmeier, E.; Biurrun, I.; Bjorkman, A.D.; Blonder, B.; Čarni, A.; Cayuela, L.; Černý, T.; Cornelissen, J.H.C.; Craven, D.; Dainese, M.; Derroire, G.; De Sanctis, M.; Díaz, S.; Doležal, J.; Farfan-Rios, W.; Feldpausch, T.R.; Fenton, N.J.; Garnier, E.; Guerin, G.R.; Gutiérrez, A.G.; Haider, S.; Hattab, T.; Henry, G.; Hérault, B.; Higuchi, P.; Hölzel, N.; Homeier, J.; Jentsch, A.; Jürgens, N.; Kącki, Z.; Karger, D.N.; Kessler, M.; Kleyer, M.; Knollová, I.; Korolyuk, A.Y.; Kühn, I.; Laughlin, D.C.; Lens, F.; Loos, J.; Louault, F.; Lyubenova, M.I.; Malhi, Y.; Marcenò, C.; Mencuccini, M.; Müller, J.V.; Munzinger, J.; Myers-Smith, I.H.; Neill, D.A.; Niinemets, Ü.; Orwin, K.H.; Ozinga, W.A.; Penuelas, J.; Pérez-Haase, A.; Petřík, P.; Phillips, O.L.; Pärtel, M.; Reich, P.B.; Römermann, C.; Rodrigues, A.V.; Sabatini, F.M.; Sardans, J.; Schmidt, M.; Seidler, G.; Silva Espejo, J.E.; Silveira, M.; Smyth, A.; Sporbert, M.; Svenning, J.-C.; Tang, Z.; Thomas, R.; Tsiripidis, I.; Vassilev, K.; Violle, C.; Virtanen, R.; Weiher, E.; Welk, E.; Wesche, K.; Winter, M.; Wirth, C.; Jandt, U. |
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Title |
Global trait–environment relationships of plant communities |
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Journal Article |
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Year |
2018 |
Publication |
Nature Ecology & Evolution |
Abbreviated Journal |
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Volume |
2 |
Issue |
12 |
Pages |
1906-1917 |
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Plant functional traits directly affect ecosystem functions. At the species level, trait combinations depend on trade-offs representing different ecological strategies, but at the community level trait combinations are expected to be decoupled from these trade-offs because different strategies can facilitate co-existence within communities. A key question is to what extent community-level trait composition is globally filtered and how well it is related to global versus local environmental drivers. Here, we perform a global, plot-level analysis of trait–environment relationships, using a database with more than 1.1 million vegetation plots and 26,632 plant species with trait information. Although we found a strong filtering of 17 functional traits, similar climate and soil conditions support communities differing greatly in mean trait values. The two main community trait axes that capture half of the global trait variation (plant stature and resource acquisitiveness) reflect the trade-offs at the species level but are weakly associated with climate and soil conditions at the global scale. Similarly, within-plot trait variation does not vary systematically with macro-environment. Our results indicate that, at fine spatial grain, macro-environmental drivers are much less important for functional trait composition than has been assumed from floristic analyses restricted to co-occurrence in large grid cells. Instead, trait combinations seem to be predominantly filtered by local-scale factors such as disturbance, fine-scale soil conditions, niche partitioning and biotic interactions. |
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2397-334x |
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EcoFoG @ webmaster @ Bruelheide2018 |
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844 |
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Courtois, E.A.; Stahl, C.; Van den Berge, J.; Bréchet, L.; Van Langenhove, L.; Richter, A.; Urbina, I.; Soong, J.L.; Peñuelas, J.; Janssens, I.A. |
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Title |
Spatial Variation of Soil CO2, CH4 and N2O Fluxes Across Topographical Positions in Tropical Forests of the Guiana Shield |
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2018 |
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Ecosystems |
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21 |
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7 |
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1445-1458 |
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The spatial variation of soil greenhouse gas fluxes (GHG; carbon dioxide—CO2, methane—CH4 and nitrous oxide—N2O) remains poorly understood in highly complex ecosystems such as tropical forests. We used 240 individual flux measurements of these three GHGs from different soil types, at three topographical positions and in two extreme hydric conditions in the tropical forests of the Guiana Shield (French Guiana, South America) to (1) test the effect of topographical positions on GHG fluxes and (2) identify the soil characteristics driving flux variation in these nutrient-poor tropical soils. Surprisingly, none of the three GHG flux rates differed with topographical position. CO2 effluxes covaried with soil pH, soil water content (SWC), available nitrogen and total phosphorus. The CH4 fluxes were best explained by variation in SWC, with soils acting as a sink under drier conditions and as a source under wetter conditions. Unexpectedly, our study areas were generally sinks for N2O and N2O fluxes were partly explained by total phosphorus and available nitrogen concentrations. This first study describing the spatial variation of soil fluxes of the three main GHGs measured simultaneously in forests of the Guiana Shield lays the foundation for specific studies of the processes underlying the observed patterns. |
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1435-0629 |
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EcoFoG @ webmaster @ Courtois2018 |
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847 |
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