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Author Devault, D.A.; Lévi, Y.; Karolak, S.
Title Applying sewage epidemiology approach to estimate illicit drug consumption in a tropical context: Bias related to sewage temperature and pH Type Journal Article
Year 2017 Publication Science of the Total Environment Abbreviated Journal Science of the Total Environment
Volume 584-585 Issue Pages 252-258
Keywords Cannabis; Degradation; H2s; Half-life; Illicit drugs; Wastewater
Abstract Illicit drug consumption can be estimated from drug target residue (DTR) in wastewater, with the reliability of results being partly linked to DTR stability in the sewage network. However, wastewater temperature and pH drive the stability of molecules and, in this context, tropical conditions must be studied to specify the impact of residence time in the sewage network on DTR degradation. Warmth enhances biotic and abiotic processes such as degradation, leading to a decrease in oxygen content, and consequently, early diagenesis conditions in wastewater. In this study, we conduct laboratory studies under acidic pH and high temperature (30 °C) conditions to determine the degradation half-lives of cocaine (COC), tetrahydrocannabinol, and heroine targets, allowing COC/benzoylecgonine (BZE) ratio variations to be predicted in sewage networks. A rapid COC degradation is observed, as already reported in the literature but without a short-term significant difference between 20 °C and 30 °C. Acidic pH seems to prevent degradation. Thus, theoretically, the use of COC as DTR is only reliable in acidic conditions, with the decrease in COC concentration being 6% at 8 h, but over 40% in other conditions. By contrast, the use of BZE as DTR to estimate COC consumption, which is performed in practice, can be undertaken with the same back-calculation equation as used in temperate countries. However, 11-nor-delta-9-carboxytetrahydrocannabinol stability is more influenced by high temperature: concentration levels after 24 h are 20% lower at 30 °C than at 20 °C, corresponding to a 20% and 40% decrease, respectively. Based on a mean residence time of 8 h, underestimated cannabis consumption is close to 15% in tropical contexts, which is double that of temperate areas. © 2017 Elsevier B.V.
Address Public Health and Environnement Laboratory, UMR 8079 Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France
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Notes (up) Export Date: 8 March 2017 Approved no
Call Number EcoFoG @ webmaster @ Serial 741
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Author Odonne, G.; Berger, F.; Stien, D.; Grenand, P.; Bourdy, G.
Title Treatment of leishmaniasis in the Oyapock basin (French Guiana): A K.A.P. survey and analysis of the evolution of phytotherapy knowledge amongst Wayãpi Indians Type Journal Article
Year 2011 Publication Journal of Ethnopharmacology Abbreviated Journal J. Ethnopharmacol.
Volume 137 Issue 3 Pages 1228-1239
Keywords Camopi River; French Guiana; Intercultural exchanges; K.A.P.; Knowledge attitude and practices; Knowledge evolution; Leishmaniasis; Oyapock River; Quantitative ethnopharmacology; Teko; Traditional remedies; Wayãpi
Abstract Ethnopharmacological relevance: Cutaneous leishmaniasis is a neglected disease with a high incidence in French Guiana, mainly in the middle and upper Oyapock basin, where Amerindian and some Brazilian people live. The main goals of this work were (i) to assess the knowledge about leishmaniasis in the different populations of the middle and upper Oyapock basin, (ii) to study the therapeutic strategies adopted by people affected by leishmaniasis and (iii) to document the use of phytotherapeutic remedies for leishmaniasis. Knowledge, attitudes and practices (K.A.P.) related to this disease and its treatments have been studied according to cultural group and geographical settlement. Within the Wayãpi group, the evolution of the knowledge of phytoremedies over the last 20 years has been characterised by literature-based comparisons. Materials and methods: A total of 144 questionnaires were administered in all the villages of the upper Oyapock and Camopi basins. Correspondence analyses were used for multivariate analysis. Plant species were identified at the Cayenne Herbarium (CAY). Results: The biomedical concept of leishmaniasis correlates well with the Teko and Wayãpi concepts of kalasapa and kalasapau. Although the vector of this disease was not correctly identified, the most commonly cited aetiology (74.5%) was vector-borne, and related epidemiological schemes correlate well with the one encountered in French Guiana. Theoretically and practically, health centres were the most commonly used resource for diagnostic in instances of leishmaniasis infection (65.9%), independently of the patient's cultural group, along with the use of pharmaceutical drugs (85.3%). Pharmaceuticals were commonly utilised despite the frequent (51.5%) use of phytotherapeutic remedies, alone or in combination with drugs. The most cited medicinal plant species for the treatment of leishmaniasis included Eleutherine bulbosa (Mill.) Urb. (Iridaceae, cited 14 times), Euterpe oleracea Mart. (Arecaceae, 9), Cecropia obtusa Trecul (Cecropiaceae, 8), Jatropha curcas L. (Euphorbiaceae, 7), Ceiba pentandra (L.) Gaertn. (Bombacaceae, 6) and Carica papaya L. (Caricaceae, 6). Multiple correspondence analyses demonstrated that the species used in leishmaniasis remedies are more prone to vary by the user's place of residence than by their cultural origin, which indicates that exchange of knowledge about leishmaniasis remedies has occurred across different cultural groups. Literature-based comparisons between the remedies for leishmaniasis used by the Wayãpi during the 1980s showed a striking evolution, both in terms of diversity of species and number of plants used. The large number of species shared with other Guianese groups argues for intercultural exchange and may explain the majority (57.1%) of the newly used species highlighted in our study. Conclusions: Leishmaniasis is a well-known disease in the studied area. Phytotherapeutic treatments are still in use, although they are not the main source of remedies, and should undergo pharmacological studies to evaluate their potential therapeutic value. © 2011 Elsevier Ireland Ltd. All rights reserved.
Address IRD, UMR152, F-31062 Toulouse Cedex 9, France
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Notes (up) Export Date: 8 November 2011; Source: Scopus; Article in Press; Coden: Joetd; doi: 10.1016/j.jep.2011.07.044; Language of Original Document: English; Correspondence Address: Odonne, G.; CNRS-UMR Ecofog, Université des Antilles et de la Guyane, 97337 Cayenne Cedex, Franceemail: guillaume.odonne@gmail.com Approved no
Call Number EcoFoG @ webmaster @ Serial 368
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Author Colin, F.; Sanjines, A.; Fortin, M.; Bontemps, J.-D.; Nicolini, E.
Title Fagus sylvatica trunk epicormics in relation to primary and secondary growth Type Journal Article
Year 2012 Publication Annals of Botany Abbreviated Journal Ann. Bot.
Volume 110 Issue 5 Pages 995-1005
Keywords epicormics; European beech; Fagus sylvatica; mixed ZIP models; ontogeny; radial growth; sprouting
Abstract Background and AimsEuropean beech epicormics have received far less attention than epicormics of other species, especially sessile oak. However, previous work on beech has demonstrated that there is a negative effect of radial growth on trunk sprouting, while more recent investigations on sessile oak proved a strong positive influence of the presence of epicormics. The aims of this study were, first, to make a general quantification of the epicormics present along beech stems and, secondly, to test the effects of both radial growth and epicormic frequency on sprouting. MethodsIn order to test the effect of radial growth, ten forked individuals were sampled, with a dominant and a dominated fork of almost equal length for every individual. To test the effects of primary growth and epicormic frequency, on the last 17 annual shoots of each fork arm, the number of axillary buds, shoot length, ring width profiles, epicormic shoots and other epicormics were carefully recorded. Key ResultsThe distribution of annual shoot length, radial growth profiles and parallel frequencies of all epicormics are presented. The latter frequencies were parallel to the annual shoot lengths, nearly equivalent for both arms of each tree, and radial growth profiles included very narrow rings in the lowest annual shoots and even missing rings in the dominated arms alone. The location of the latent buds and the epicormics was mainly at branch base, while epicormic shoots, bud clusters and spheroblasts were present mainly in the lowest annual shoots investigated. Using a zero-inflated mixed model, sprouting was shown to depend positively on epicormic frequency and negatively on radial growth. ConclusionsSupport for a trade-off between cambial activity and sprouting is put forward. Sprouting mainly depends on the frequency of epicormics. Between-and within-tree variability of the epicormic composition in a given species may thus have fundamental and applied implications. © 2012 The Author.
Address Equipe Architecture et Développement des Plantes, CIRAD, Campus Agronomique de Silvolab, BP 701, 97387 Kourou cedex, Guyane, France
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Notes (up) Export Date: 8 October 2012; Source: Scopus; Coden: Anboa; doi: 10.1093/aob/mcs178; Language of Original Document: English; Correspondence Address: Colin, F.; INRA, Centre de Nancy, UMR 1092 INRA-AgroParisTech LERFoB, 54280 Champenoux, France; email: colin@nancy.inra.fr Approved no
Call Number EcoFoG @ webmaster @ Serial 439
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Author Moore, A.L.; McCarthy, M.A.; Parris, K.M.; Moore, J.L.
Title The optimal number of surveys when detectability varies Type Journal Article
Year 2014 Publication PLoS ONE Abbreviated Journal PLoS ONE
Volume 9 Issue 12 Pages e115345
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Abstract The survey of plant and animal populations is central to undertaking field ecology. However, detection is imperfect, so the absence of a species cannot be determined with certainty. Methods developed to account for imperfect detectability during surveys do not yet account for stochastic variation in detectability over time or space. When each survey entails a fixed cost that is not spent searching (e.g., time required to travel to the site), stochastic detection rates result in a trade-off between the number of surveys and the length of each survey when surveying a single site. We present a model that addresses this trade-off and use it to determine the number of surveys that: 1) maximizes the expected probability of detection over the entire survey period; and 2) is most likely to achieve a minimally-acceptable probability of detection. We illustrate the applicability of our approach using three practical examples (minimum survey effort protocols, number of frog surveys per season, and number of quadrats per site to detect a plant species) and test our model's predictions using data from experimental plant surveys. We find that when maximizing the expected probability of detection, the optimal survey design is most sensitive to the coefficient of variation in the rate of detection and the ratio of the search budget to the travel cost. When maximizing the likelihood of achieving a particular probability of detection, the optimal survey design is most sensitive to the required probability of detection, the expected number of detections if the budget were spent only on searching, and the expected number of detections that are missed due to travel costs. We find that accounting for stochasticity in detection rates is likely to be particularly important for designing surveys when detection rates are low. Our model provides a framework to do this. © 2014 Moore et al.
Address School of Biological Sciences, Monash University, Melbourne, VIC, Australia
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Notes (up) Export Date: 8 September 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 618
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Author Baraloto, C.; Alverga, P.; Quispe, S.B.; Barnes, G.; Chura, N.B.; da Silva, I.B.; Castro, W.; da Souza, H.; de Souza Moll, I.E.; Del Alcazar Chilo, J.; Linares, H.D.; Quispe, J.G.; Kenji, D.; Marsik, M.; Medeiros, H.; Murphy, S.; Rockwell, C.; Selaya, G.; Shenkin, A.; Silveira, M.; Southworth, J.; Vasquez Colomo, G.H.; Perz, S.
Title Effects of road infrastructure on forest value across a tri-national Amazonian frontier Type Journal Article
Year 2015 Publication Biological Conservation Abbreviated Journal Biological Conservation
Volume 191 Issue Pages 674-681
Keywords Açai; Biodiversity; Brazil nut; Carbon stocks; Connectivity; Infrastructure; Livelihood; Ntfp; Redd; Road impact; Rubber; Timber; Tropical rainforest
Abstract Road construction demonstrably accelerates deforestation rates in tropical forests, but its consequences for forest degradation remain less clear. We estimated a series of forest value metrics including components of biodiversity, carbon stocks, and timber and non-timber forest product resources, along the recently paved Inter-Oceanic Highway (IOH) integrating Brazil and Peru along the Bolivian border. We installed 69 vegetation plots in intact terra firme forests representative of local community holdings near and far from the IOH, and we characterized 15 components of forest value for each plot.We observed strong geographic gradients in forest value components across the region, with increases from west to east in aboveground biomass and in the abundance of timber and non-timber forest product trees and regeneration. Plots in communities in Pando, Bolivia, where the IOH remains in part unpaved, had the highest aboveground biomass, standing timber volumes and Brazil nut tree density. In contrast, communities in Madre de Dios, Peru, where settlements and unpaved portions of the IOH have existed for decades, and in Acre, Brazil, where paving of the IOH has been underway for more than a decade, were more degraded. Seven of the fifteen forest value components we measured increased with increasing distance from the IOH, although the magnitude of these effects was weak. Landscape scale remote sensing analyses showed much stronger effects of road proximity on deforestation. We suggest that remote sensing techniques including canopy spectral signatures might be calibrated to characterize multiple components of forest value, so that we can estimate landscape scale impacts of infrastructure developments on both deforestation and forest degradation in tropical regions. © 2015 Elsevier B.V.
Address International Center for Tropical Botany, Department of Earth and Environment, Florida International University, Miami, FL, United States
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Notes (up) Export Date: 8 September 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 619
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Author Guitet, S.; Pélissier, R.; Brunaux, O.; Jaouen, G.; Sabatier, D.
Title Geomorphological landscape features explain floristic patterns in French Guiana rainforest Type Journal Article
Year 2015 Publication Biodiversity and Conservation Abbreviated Journal Biodiversity and Conservation
Volume 24 Issue 5 Pages 1215-1237
Keywords Geodiversity; Geomorphology; Landscapes; Species distribution; Tree community
Abstract Geomorphic landscape features have been suggested as indicators of forest diversity. However, their explanatory power has not yet been explicitly tested at a regional scale in tropical rainforest. We used forest inventories conducted according to a stratified sampling design (3,132 plots in 111 transects at 33 sites) and holistic multi-scale geomorphological mapping derived from a Shuttle Radar Topography Mission digital elevation model to describe and explain spatial patterns in floristic composition across French Guiana (80,000 km2). We measured and identified 123,906 trees with DBH ≥20 cm and used constrained and unconstrained ordinations to analyze variations in the abundance of 221 taxa and 51 families. Variance partitioning and variograms were used to detect spatial patterns in species composition, compare the explanatory power of spatial and environmental factors, and select the variables that best explain forest composition. Strong floristic patterns corresponded to a major latitudinal gradient and significant sub-regional floristic structure. Geomorphological landscapes shaped by historic climate fluctuations and major geological events successfully captured these patterns and explained the variation in abundance of 80 taxa, corresponding to 65 % of the inventoried trees. Our findings suggest that long-term forest dynamics are under substantial “geomorphographic control”. A geomorphological perspective on landscapes that incorporates current and past environmental filters and historical biogeographical processes could thus be used more systematically in tropical regions for regional planning and forest conservation. © 2014, Springer Science+Business Media Dordrecht.
Address UMR EcoFoG, AgroParisTech, Campus agronomique, Guyane Française, BP 316, Kourou, France
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Notes (up) Export Date: 8 September 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 620
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Author Lambs, L.; Bompy, F.; Imbert, D.; Corenblit, D.; Dulormne, M.
Title Seawater and freshwater circulations through coastal forested wetlands on a Caribbean Island Type Journal Article
Year 2015 Publication Water Abbreviated Journal Water
Volume 7 Issue 8 Pages 4108-4128
Keywords 18O/2H stable isotope; Hydrology; Mangrove; Salinity; Swamp forest; Water level
Abstract Structure and composition of coastal forested wetlands are mainly controlled by local topography and soil salinity. Hydrology plays a major role in relation with tides, seaward, and freshwater inputs, landward. We report here the results of a two-year study undertaken in a coastal plain of the Guadeloupe archipelago (FWI). As elsewhere in the Caribbean islands, the study area is characterized by a micro-tidal regime and a highly seasonal climate. This work aimed at understanding groundwater dynamics and origin (seawater/freshwater) both at ecosystems and stand levels. These hydrological processes were assessed through 18O/16O and 2H/1H isotopic analyses, and from monthly monitoring of water level and soil salinity at five study sites located in mangrove (3) and swamp forest (2). Our results highlight the importance of freshwater budget imbalance during low rainfall periods. Sustained and/or delayed dry seasons cause soil salinity to rise at the mangrove/swamp forest ecotone. As current models on climate change project decreasing rainfall amounts over the inner Caribbean region, one may expect for this area an inland progression of the mangrove forest to the expense of the nearby swamp forest. © 2015 by the authors.
Address Geolab, UMR 6042, CNRS-Université Blaise Pascal, 4 rue Ledru, Clermont-Ferrand Cedex, France
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Notes (up) Export Date: 8 September 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 621
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Author Engel, J.; Brousseau, L.; Baraloto, C.
Title GuiaTreeKey, a multi-access electronic key to identify tree genera in French Guiana Type Journal Article
Year 2016 Publication PhytoKeys Abbreviated Journal PhytoKeys
Volume 68 Issue 1 Pages 27-44
Keywords Amazonia; Electronic key; French Guiana; Morphological characters; Neotropics; Trees identification; Xper2
Abstract The tropical rainforest of Amazonia is one of the most species-rich ecosystems on earth, with an estimated 16000 tree species. Due to this high diversity, botanical identification of trees in the Amazon is difficult, even to genus, often requiring the assistance of parataxonomists or taxonomic specialists. Advances in informatics tools offer a promising opportunity to develop user-friendly electronic keys to improve Amazonian tree identification. Here, we introduce an original multi-access electronic key for the identification of 389 tree genera occurring in French Guiana terra-firme forests, based on a set of 79 morphological characters related to vegetative, floral and fruit characters. Its purpose is to help Amazonian tree identification and to support the dissemination of botanical knowledge to non-specialists, including forest workers, students and researchers from other scientific disciplines. The electronic key is accessible with the free access software Xper2, and the database is publicly available on figshare: https://figshare.com/s/75d890b7d707e0ffc9bf (doi: 10.6084/m9.figshare.2682550). © Julien Engel et al.
Address International Center for Tropical Botany, Department of Biological Sciences, Florida International University, 11200 SW 8th Street, Miami, FL, United States
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Notes (up) Export Date: 8 September 2016 Approved no
Call Number EcoFoG @ webmaster @ Serial 693
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Author Lamarre, G.P.A.; Mendoza, I.; Rougerie, R.; Decaëns, T.; Herault, B.; Bénéluz, F.
Title Stay Out (Almost) All Night: Contrasting Responses in Flight Activity Among Tropical Moth Assemblages Type Journal Article
Year 2015 Publication Neotropical Entomology Abbreviated Journal Neotropical Entomology
Volume 44 Issue 2 Pages 109-115
Keywords Behavior; diel activity; light trap; monitoring; moth; tropical forest
Abstract Variations in diel activity among hyperdiverse tropical communities of moths, despite representing a key component of niche partitioning between species, have barely been studied so far. Using light trapping from dawn to sunset over a 1-year period in French Guiana, we investigated these variations within and between two families of moths (Sphingidae and Saturniidae). Our results revealed contrasting patterns in flight activity at night between Sphingidae and Saturniidae. Sphingidae reached their peak in species richness and abundance between 7:00 and 8:00 p.m., followed by a decrease around 11:00 p.m. to midnight, whereas Saturniidae were continuously present throughout the night, with a peak around midnight. In addition, we found changes in diel activity among some of the most common genera in each family, highlighting distinct behavioral, physiological, and functional traits among taxa. Given differences in flight activity at different taxonomic levels, it is strongly recommended to monitor by light trapping throughout the night to effectively sample saturniid and sphingid assemblages, even though the activity of Sphingidae sharply declines after midnight. These results improve the general natural history information of tropical moths and reinforce the need of further research on the ecological and taxonomic consequences of differences in diel activity. © 2015, Sociedade Entomológica do Brasil.
Address Centre d’Ecologie Fonctionnelle et Evolutive, UMR 5175 CNRSMontpellier Cedex 5, France
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Notes (up) Export Date: 9 April 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 592
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Author Malé, P.-J.G.; Leroy, C.; Lusignan, L.; Petitclerc, F.; Quilichini, A.; Orivel, J.
Title The reproductive biology of the myrmecophyte, Hirtella physophora, and the limitation of negative interactions between pollinators and ants Type Journal Article
Year 2015 Publication Arthropod-Plant Interactions Abbreviated Journal Arthropod-Plant Interactions
Volume 9 Issue 1 Pages 23-31
Keywords Ant-plant; Ant–pollinator interactions; Floral structure and display; Plant reproductive biology; Spatial and temporal segregation
Abstract Myrmecophytism occurs in plants that offer ants a nesting space and, often, food rewards in exchange for protection from predators and competitors. Such biotic protection by ants can, however, interfere with the activity of pollinators leading to potential negative consequences for the plant’s reproduction. In this study, we focused on the association between the understory myrmecophyte, Hirtella physophora (Chrysobalanaceae), and its obligate ant partner, Allomerus decemarticulatus (Myrmicinae). We investigated the reproductive biology of H. physophora and the putative mechanisms that may limit ant–pollinator conflict. Our results show that H. physophora is an obligate outcrosser, self-incompatible, and potentially insect-pollinated species. The reproduction of H. physophora relies entirely on pollen transfer by pollinators that are likely quite specific. Potential interference between flower-visiting insects during pollination may also be lessened by a spatial and temporal segregation of ant and pollinator activities, thus enabling pollen transfer and fruit production. © 2014, Springer Science+Business Media Dordrecht.
Address IRD, UMR AMAP (botAnique et bioinforMatique de l’Architecture des Plantes), Boulevard de la Lironde, TA A-51/PS2Montpellier Cedex 5, France
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Notes (up) Export Date: 9 April 2015 Approved no
Call Number EcoFoG @ webmaster @ Serial 593
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