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Author Piponiot, C.; Rödig, E.; Putz, F.E.; Rutishauser, E.; Sist, P.; Ascarrunz, N.; Blanc, L.; Derroire, G.; Descroix, L.; Guedes, M.C.; Coronado, E.H.; Huth, A.; Kanashiro, M.; Licona, J.C.; Mazzei, L.; d’Oliveira, M.V.N.; Peña-Claros, M.; Rodney, K.; Shenkin, A.; de Souza, C.R.; Vidal, E.; West, T.A.P.; Wortel, V.; Herault, B. pdf  doi
openurl 
  Title Can timber provision from Amazonian production forests be sustainable? Type Journal Article
  Year 2019 Publication Environmental Research Letters Abbreviated Journal Environmental Research Letters  
  Volume 14 Issue 6 Pages 064014  
  Keywords  
  Abstract Around 30 Mm3 of sawlogs are extracted annually by selective logging of natural production forests in Amazonia, Earth’s most extensive tropical forest. Decisions concerning the management of these production forests will be of major importance for Amazonian forests’ fate. To date, no regional assessment of selective logging sustainability supports decision-making. Based on data from 3500 ha of forest inventory plots, our modelling results show that the average periodic harvests of 20 m3 ha−1 will not recover by the end of a standard 30 year cutting cycle. Timber recovery within a cutting cycle is enhanced by commercial acceptance of more species and with the adoption of longer cutting cycles and lower logging intensities. Recovery rates are faster in Western Amazonia than on the Guiana Shield. Our simulations suggest that regardless of cutting cycle duration and logging intensities, selectively logged forests are unlikely to meet timber demands over the long term as timber stocks are predicted to steadily decline. There is thus an urgent need to develop an integrated forest resource management policy that combines active management of production forests with the restoration of degraded and secondary forests for timber production. Without better management, reduced timber harvests and continued timber production declines are unavoidable.  
  Address  
  Corporate Author Thesis  
  Publisher IOP Publishing Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1748-9326 ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 875  
Permanent link to this record
 

 
Author Rodrigues, A.M.S.; Eparvier, V.; Odonne, G.; Amusant, N.; Stien, D.; Houël, E. pdf  url
doi  openurl
  Title The antifungal potential of (Z)-ligustilide and the protective effect of eugenol demonstrated by a chemometric approach Type Journal Article
  Year 2019 Publication Scientific Reports Abbreviated Journal Sci. Rep.  
  Volume 9 Issue Pages 8729  
  Keywords  
  Abstract Mankind is on the verge of a postantibiotic era. New concepts are needed in our battle to attenuate infectious diseases around the world and broad spectrum plant-inspired synergistic pharmaceutical preparations should find their place in the global fight against pathogenic microorganisms. To progress towards the discovery of potent antifungal agents against human pathologies, we embarked upon developing chemometric approach coupled with statistical design to unravel the origin of the anticandidal potential of a set of 66 essential oils (EOs). EOs were analyzed by GC-MS and tested against Candida albicans and C. parapsilosis (Minimal Inhibitory Concentration, MIC). An Orthogonal Partial Least Square (OPLS) analysis allowed us to identify six molecules presumably responsible for the anticandidal activity of the oils: (Z)-ligustilide, eugenol, eugenyl acetate, citral, thymol, and β-citronellol. These compounds were combined following a full factorial experimental design approach in order to optimize the anticandidal activity and selectivity index (SI = IC50(MRC5 cells)/MIC) through reconstituted mixtures. (Z)-Ligustilide and citral were the most active compounds, while (Z)-ligustilide and eugenol were the two main factors that most contributed to the increase of the SI. These two terpenes can, therefore, be used to construct bioinspired synergistic anticandidal mixtures. © 2019, The Author(s).  
  Address CNRS, UMR EcoFoG, AgroParisTech, Cirad, INRA, Université des Antilles, Université de Guyane, Cayenne, 97300, France  
  Corporate Author Thesis  
  Publisher Nature Publishing Group Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 20452322 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 876  
Permanent link to this record
 

 
Author Fichaux, M.; Béchade, B.; Donald, J.; Weyna, A.; Delabie, J.H.C.; Murienne, J.; Baraloto, C.; Orivel, J. url  doi
openurl 
  Title Habitats shape taxonomic and functional composition of Neotropical ant assemblages Type Journal Article
  Year 2019 Publication Oecologia Abbreviated Journal Oecologia  
  Volume 189 Issue 2 Pages 501-513  
  Keywords Formicidae; Functional diversity; Habitat filtering; Rainforest; Traits; Formicidae  
  Abstract Determining assembly rules of co-occurring species persists as a fundamental goal in community ecology. At local scales, the relative importance of environmental filtering vs. competitive exclusion remains a subject of debate. In this study, we assessed the relative importance of habitat filtering and competition in structuring understory ant communities in tropical forests of French Guiana. Leaf-litter ants were collected using pitfall and Winkler traps across swamp, slope and plateau forests near Saül, French Guiana. We used a combination of univariate and multivariate analyses to evaluate trait response of ants to habitat characteristics. Null model analyses were used to investigate the effects of habitat filtering and competitive interactions on community assembly at the scale of assemblages and sampling points, respectively. Swamp forests presented a much lower taxonomic and functional richness compared to slope and plateau forests. Furthermore, marked differences in taxonomic and functional composition were observed between swamp forests and slope or plateau forests. We found weak evidence for competitive exclusion based on null models. Nevertheless, the contrasting trait composition observed between habitats revealed differences in the ecological attributes of the species in the different forest habitats. Our analyses suggest that competitive interactions may not play an important role in structuring leaf-litter ant assemblages locally. Rather, habitats are responsible for driving both taxonomic and functional composition of ant communities.  
  Address International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL 33199, United States  
  Corporate Author Thesis  
  Publisher Springer Verlag Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00298549 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 863  
Permanent link to this record
 

 
Author Bodin, S.C.; Scheel-Ybert, R.; Beauchene, J.; Molino, J.-F.; Bremond, L. url  doi
openurl 
  Title CharKey: An electronic identification key for wood charcoals of French Guiana Type Journal Article
  Year 2019 Publication IAWA Journal Abbreviated Journal Iawa J.  
  Volume 40 Issue 1 Pages 75-91  
  Keywords anthracology; Charcoal anatomy; computeraided identification; Note: Supplementary material can be accessed in the online edition of this journal via brill.com/iawa.; tropical flora; Xper 2  
  Abstract Tropical tree floras are highly diverse and many genera and species share similar anatomical patterns, making the identification of tropical wood charcoal very difficult. Appropriate tools to characterize charcoal anatomy are thus needed to facilitate and improve identification in such species-rich areas. This paper presents the first computer-aided identification key designed for charcoals from French Guiana, based on the wood anatomy of 507 species belonging to 274 genera and 71 families, which covers respectively 28%, 67% and 86% of the tree species, genera and families currently listed in this part of Amazonia. Species of the same genus are recorded together except those described under a synonym genus in Détienne et al. (1982) that were kept separately. As a result, the key contains 289 'items' and mostly aims to identify charcoals at the genus level. It records 26 anatomical features leading to 112 feature states, almost all of which are illustrated by SEM photographs of charcoal. The descriptions were mostly taken from Détienne et al.'s guidebook on tropical woods of French Guiana (1982) and follow the IAWA list of microscopic features for hardwood identification (Wheeler et al. 1989). Some adjustments were made to a few features and those that are unrelated to charcoal identification were excluded. The whole tool, named CharKey, contains the key itself and the associated database including photographs. It can be downloaded on Figshare at https://figshare.com/s/d7d40060b53d2ad60389 (doi: 10.6084/m9.figshare.6396005). CharKey is accessible using the free software Xper 2 , specifically conceived for taxonomic description and computer aided-identification.  
  Address Ecole Pratique des Hautes Etudes, PSL Research University, Paris, France  
  Corporate Author Thesis  
  Publisher Brill Academic Publishers Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 09281541 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 864  
Permanent link to this record
 

 
Author Franco, W.; Ladino, N.;Delabie, J.H.C.;Dejean, A.;Orivel, J.;Fichaux, M.; Groc, S.;Leponce, M.;Feitosa, R.M. doi  openurl
  Title First checklist of the ants (Hymenoptera: Formicidae) of French Guiana Type Journal Article
  Year 2019 Publication Zootaxa Abbreviated Journal  
  Volume 4674 Issue 5 Pages 509-543  
  Keywords  
  Abstract We provide here a checklist of the ants of French Guiana, an overseas department of France situated in northern South America, with a very low human population density and predominantly covered by old-growth tropical rainforests. Based on 165 scientific papers, specimens deposited in collections, and unpublished surveys, a total of 659 valid species and subspecies from 84 genera and 12 subfamilies is presented. Although far from complete, these numbers represent approximately 10% of the ant diversity known to occur in the Neotropical realm. Additionally, three ant genera and 119 species are reported for the first time for French Guiana. Finally, five species are recognized as erroneous records for the the department in the literature. This checklist significantly expands the basic knowledge of the ants in the Guiana Shield, one of the world’s most important biodiversity hotspots.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 886  
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Author Leroy, C.; Maes, A.Q.; Louisanna, E.; Séjalon-Delmas, N. url  doi
openurl 
  Title How significant are endophytic fungi in bromeliad seeds and seedlings? Effects on germination, survival and performance of two epiphytic plant species Type Journal Article
  Year 2019 Publication Fungal Ecology Abbreviated Journal Fungal Ecol.  
  Volume 39 Issue Pages 296-306  
  Keywords Aechmea; Bromeliads; Endophytic fungi; Fusarium spp.; Germination; Survival; Trichoderma spp.; Vertical transmission  
  Abstract In bromeliads, nothing is known about the associations fungi form with seeds and seedling roots. We investigated whether fungal associations occur in the seeds and seedling roots of two epiphytic Aechmea species, and we explored whether substrate and fungal associations contribute to seed germination, and seedling survival and performance after the first month of growth. We found a total of 21 genera and 77 species of endophytic fungi in the seeds and seedlings for both Aechmea species by Illumina MiSeq sequencing. The fungal associations in seeds were found in the majority of corresponding seedlings, suggesting that fungi are transmitted vertically. Substrate quality modulated the germination and growth of seedlings, and beneficial endophytic fungi were not particularly crucial for germination but contributed positively to survival and growth. Overall, this study provides the first evidence of an endophytic fungal community in both the seeds and seedlings of two epiphytic bromeliads species that subsequently benefit plant growth. © 2019 Elsevier Ltd and British Mycological Society  
  Address INRA, UMR Ecologie des Forêts de Guyane (AgroParisTech, CIRAD, CNRS, INRA, Université de Guyane, Université des Antilles), Campus Agronomique, BP 316, Kourou cedex, F-97379, France  
  Corporate Author Thesis  
  Publisher Elsevier Ltd Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 17545048 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 867  
Permanent link to this record
 

 
Author Maurice, L.; López, F.; Becerra, S.; Jamhoury, H.; Le Menach, K.; Dévier, M.-H.; Budzinski, H.; Prunier, J.; Juteau-Martineau, G.; Ochoa-Herrera, V.; Quiroga, D.; Schreck, E. doi  openurl
  Title Drinking water quality in areas impacted by oil activities in Ecuador: Associated health risks and social perception of human exposure Type Journal Article
  Year 2019 Publication Science of the Total Environment Abbreviated Journal Sci. Total Environ.  
  Volume 690 Issue Pages 1203-1217  
  Keywords Demineralized waters; Domestic waters; Hydrocarbons; Metal(loid)s; Oil activities; Social risk perception; Benzene refining; Health; Health risks; Hydrocarbons; Petroleum refineries; Petroleum refining; Polycyclic aromatic hydrocarbons; Potable water; Risk assessment; Risk perception; Toluene; Trace elements; Water quality; Water wells; Zinc; Arsenic concentration; Demineralized water; Domestic water; Information sources; Living conditions; Microbiological analysis; Natural backgrounds; Oil activities; Water distribution systems  
  Abstract The unregulated oil exploitation in the Northern Ecuadorian Amazon Region (NEAR), mainly from 1964 to the 90's, led to toxic compounds largely released into the environment. A large majority of people living in the Amazon region have no access to drinking water distribution systems and collects water from rain, wells or small streams. The concentrations of major ions, trace elements, PAHs (polycyclic aromatic hydrocarbons) and BTEX (benzene, toluene, ethylbenzene, xylenes) were analyzed in different water sources to evaluate the impacts of oil extraction and refining. Samples were taken from the NEAR and around the main refinery of the country (Esmeraldas Oil Refinery/State Oil Company of Ecuador) and were compared with domestic waters from the Southern region, not affected by petroleum activities. In most of the samples, microbiological analysis revealed a high level of coliforms representing significant health risks. All measured chemical compounds in waters were in line with national and international guidelines, except for manganese, zinc and aluminum. In several deep-water wells, close to oil camps, toluene concentrations were higher than the natural background while PAHs concentrations never exceeded individually 2 ng·L−1. Water ingestion represented 99% of the total exposure pathways for carcinogenic and non-carcinogenic elements (mainly zinc) in adults and children, while 20% to 49% of the Total Cancer Risk was caused by arsenic concentrations. The health index (HI) indicates acceptable chronic effects for domestic use according the US-EPA thresholds. Nevertheless, these limits do not consider the cocktail effects of metallic and organic compounds. Furthermore, they do not include the social determinants of human exposure, such as socio-economic living conditions or vulnerability. Most (72%) of interviewed families knew sanitary risks but a discrepancy was observed between knowledge and action: religious beliefs, cultural patterns, information sources, experience and emotions play an important role front to exposure. © 2019  
  Address Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel HillNC 2759, United States  
  Corporate Author Thesis  
  Publisher Elsevier B.V. Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00489697 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 877  
Permanent link to this record
 

 
Author Aubry-Kientz, M.; Rossi, V.; Cornu, G.; Wagner, F.; Herault, B. pdf  url
doi  openurl
  Title Temperature rising would slow down tropical forest dynamic in the Guiana Shield Type Journal Article
  Year 2019 Publication Scientific Reports Abbreviated Journal Sci. Rep.  
  Volume 9 Issue Pages 10235  
  Keywords article; biomass; climate change; controlled study; diagnostic test accuracy study; driver; human; joint; mortality rate; precipitation; prediction; sensitivity analysis; simulation; statistics; tree growth; tropical rain forest; water stress  
  Abstract Increasing evidence shows that the functioning of the tropical forest biome is intimately related to the climate variability with some variables such as annual precipitation, temperature or seasonal water stress identified as key drivers of ecosystem dynamics. How tropical tree communities will respond to the future climate change is hard to predict primarily because several demographic processes act together to shape the forest ecosystem general behavior. To overcome this limitation, we used a joint individual-based model to simulate, over the next century, a tropical forest community experiencing the climate change expected in the Guiana Shield. The model is climate dependent: temperature, precipitation and water stress are used as predictors of the joint growth and mortality rates. We ran simulations for the next century using predictions of the IPCC 5AR, building three different climate scenarios (optimistic RCP2.6, intermediate, pessimistic RCP8.5) and a control (current climate). The basal area, above-ground fresh biomass, quadratic diameter, tree growth and mortality rates were then computed as summary statistics to characterize the resulting forest ecosystem. Whatever the scenario, all ecosystem process and structure variables exhibited decreasing values as compared to the control. A sensitivity analysis identified the temperature as the strongest climate driver of this behavior, highlighting a possible temperature-driven drop of 40% in average forest growth. This conclusion is alarming, as temperature rises have been consensually predicted by all climate scenarios of the IPCC 5AR. Our study highlights the potential slow-down danger that tropical forests will face in the Guiana Shield during the next century. © 2019, The Author(s).  
  Address Institut National Polytechnique Félix Houphouët-Boigny (INP-HB), Yamoussoukro, Cote d'Ivoire  
  Corporate Author Thesis  
  Publisher Nature Publishing Group Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 20452322 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 878  
Permanent link to this record
 

 
Author Vleminckx, J.; Schimann, H.; Decaëns, T.; Fichaux, M.; Vedel, V.; Jaouen, G.; Roy, M.; Lapied, E.; Engel, J.; Dourdain, A.; Petronelli, P.; Orivel, J.; Baraloto, C. pdf  doi
openurl 
  Title Coordinated community structure among trees, fungi and invertebrate groups in Amazonian rainforests Type Journal Article
  Year 2019 Publication Scientific Reports Abbreviated Journal Sci. Rep.  
  Volume 9 Issue Pages 11337  
  Keywords  
  Abstract Little is known regarding how trophic interactions shape community assembly in tropical forests. Here we assess multi-taxonomic community assembly rules using a rare standardized coordinated inventory comprising exhaustive surveys of five highly-diverse taxonomic groups exerting key ecological functions: trees, fungi, earthworms, ants and spiders. We sampled 36 1.9-ha plots from four remote locations in French Guiana including precise soil measurements, and we tested whether species turnover was coordinated among groups across geographic and edaphic gradients. All species group pairs exhibited significant compositional associations that were independent from soil conditions. For some of the pairs, associations were also partly explained by soil properties, especially soil phosphorus availability. Our study provides evidence for coordinated turnover among taxonomic groups beyond simple relationships with environmental factors, thereby refining our understanding regarding the nature of interactions occurring among these ecologically important groups. © 2019, The Author(s).  
  Address CIRAD, UMR Ecologie des Forêts de Guyane, Campus agronomique, BP 316, Kourou Cedex, 97379, France  
  Corporate Author Thesis  
  Publisher Nature Publishing Group Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 20452322 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 879  
Permanent link to this record
 

 
Author Richard-Hansen, C.; Davy, D.; Longin, G.; Gaillard, L.; Renoux, F.; Grenand, P.; Rinaldo, R. pdf  url
doi  openurl
  Title Hunting in French Guiana Across Time, Space and Livelihoods Type Journal Article
  Year 2019 Publication Frontiers in Ecology and Evolution Abbreviated Journal  
  Volume 7 Issue Pages 289  
  Keywords  
  Abstract Hunting sustainability in Amazonian ecosystems is a key challenge for modern stakeholders. Predictive models have evolved from first mostly biological data-based to more recent modelling including human behavior. We analyze here the hunting data collected in French Guiana through a panel of indices aiming at drawing the puzzle of parameters influencing hunting activity and impact in various socio ecological conditions across the country. Data were collected from five different study sites differing in cultural origins and remoteness from market economy, and over a ten years period. Most indices show an impact on wildlife populations, and using a full set of indicators allowed us to better understand some underlying mechanisms that lead to a community’s hunting profile. The results showed that there are noticeable differences between the study sites in the practices and the ways hunters face the changes in environment and resources availability  
  Address  
  Corporate Author Thesis  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 2296-701x ISBN Medium  
  Area Expedition Conference  
  Notes (down) Approved no  
  Call Number EcoFoG @ webmaster @ Serial 880  
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