Abstract: In French Guiana, the population growth will result in an increase in demand for agricultural products and thus, will lead to an increase in the amount of tropical forests converted into cropland or pasture. Impacts of different agricultural systems on greenhouse gas (GHG) fluxes have not been studied in French Guiana. In this context, the fire-free chop-and-mulch method was used to convert a tropical forest site to agriculture. This study focused on soil nitrous oxide (N<inf>2</inf>O) emissions and we compared four land uses: (1) the undisturbed tropical forest, (2) recently converted grassland and recently converted croplands (fertilized soybean/maize rotation) with either (3) disk tillage or (4) no tillage.N<inf>2</inf>O measurements were obtained through the chamber technique and conducted over a 1-year period (measurements began 19 months after the forest was cleared). N<inf>2</inf>O fluxes were related to soil parameters measured at each sampling date: nitrate and ammonium contents, gravimetric water content (GWC) and temperature. Through the entire period, the mean (± standard error) and median N<inf>2</inf>O fluxes were 3.8 ± 0.5 and 2.7 gNha-1day-1, respectively for undisturbed tropical forest and 2.4 ± 0.9 and 0.8gNha-1day-1, respectively for grassland (mowed Brachiaria ruziziensis). For croplands, no significant difference was found for N<inf>2</inf>O emissions between both agricultural practices. The mean (± standard error) and median N<inf>2</inf>O fluxes were 8.5 ± 1.2 and 4.0 gNha-1day-1, respectively for disk tillage plots and 8.5 ± 1.3 and 3.6gNha-1day-1, respectively for no tillage plots. Nitrogen inputs (due to the application of fertilizer or due to the mineralization of crop residues) led to higher N<inf>2</inf>O fluxes, resulting in significantly higher mean N<inf>2</inf>O emissions from croplands compared to the forest, when only considering land use effect on N<inf>2</inf>O fluxes in a statistical model. The soil nitrate content, GWC and temperature had a significant positive effect on N<inf>2</inf>O fluxes. Taking into account these soil parameters in another statistical model, N<inf>2</inf>O emissions from croplands were not higher than the natural N<inf>2</inf>O emissions from tropical forest soils. Our results suggest that, if more forest will have to be converted in the course of the expected population growth in French Guiana, it could have low impact on the soil N<inf>2</inf>O fluxes (similar to natural fluxes from forest) with the improving of farming techniques (for example modification of the splitting of N-fertilizer) in the cropping plots. © 2015 Elsevier B.V.

Abstract: Chronoamperometry is known to be an efficient way to form electroactive biofilms (EAB) on conductive electrodes. For the first time, tropical mangrove sediments are analyzed as a potential inoculum to form MFC anodes with the use of acetate as substrate. The performance of the EAB-coated carbon cloth electrodes are evaluated according to the maximal current density, the coulombic efficiency and the cyclic voltammogramms. Working electrodes (WE) polarized at -0.2V/SCE gave better results compared to -0.4V/SCE and 0.0V/SCE. The maximal current density attained was 12A/m 2 with a CE of 24%. Contributions of the EAB in the generation of current were discussed and mechanisms of electronic transfer by the bacteria were discussed. Epifluorescence and SEM images showed the evolution of the biofilms on the electrode surface and the heterogeneity of the structure. © 2012 Elsevier Ltd.

Abstract: Recent evolutionary studies clearly indicate that evolution is mainly driven by changes in the complex mechanisms of gene regulation and not solely by polymorphism in protein-encoding genes themselves. After a short description of the cis-regulatory mechanism, we intend in this review to argue that by applying newly available technologies and by merging research areas such as evolutionary and developmental biology, population genetics, ecology and molecular cell biology it is now possible to study evolution in an integrative way. We contend that, by analysing the effects of promoter sequence variation on phenotypic diversity in natural populations, we will soon be able to break the barrier between the study of extant genetic variability and the study of major developmental changes. This will lead to an integrative view of evolution at different scales. Because of their sessile nature and their continuous development, plants must permanently regulate their gene expression to react to their environment, and can, therefore, be considered as a remarkable model for these types of studies. (C) 2010 Elsevier Ireland Ltd. All rights reserved.

Abstract: European beech (Fagus sylvatica L.) is one of the most economically and ecologically important deciduous trees in Europe, yet little is known about its genomic diversity and its adaptive potential. Here, we detail the discovery and analysis of 573 single nucleotide polymorphisms (SNPs) from 58 candidate gene fragments that are potentially involved in abiotic stress response and budburst phenology using a panel of 96 individuals from southeastern France. The mean nucleotide diversity was low (θ π = 2.2 × 10-3) but extremely variable among gene fragments (range from 0.02 to 10), with genes carrying insertion/deletion mutations exhibiting significantly higher diversity. The decay of linkage disequilibrium (LD) measured at gene fragments >800 base pairs was moderate (the half distance of r 2 was 154 bp), consistent with the low average population-scaled recombination rate (ρ = 5.4 × 10-3). Overall, the population-scaled recombination rate estimated in F. sylvatica was lower than for other angiosperm tree genera (such as Quercus or Populus) and similar to conifers. As a methodological perspective, we explored the effect of minimum allele frequency (MAF) on LD and showed that higher MAF resulted in slower decay of LD. It is thus essential that the same MAF is used when comparing the decay of LD among different studies and species. Our results suggest that genome-wide association mapping can be a potentially efficient approach in F. sylvatica, which has a relatively small genome size. © 2013 Springer-Verlag Berlin Heidelberg.

Abstract: Amazonian droughts are predicted to become increasingly frequent and intense, and the vulnerability of Amazonian trees has become increasingly documented. However, little is known about the physiological mechanisms and the diversity of drought tolerance of tropical trees due to the lack of quantitative measurements. Leaf water potential at wilting or turgor loss point (π<inf>tlp</inf>) is a determinant of the tolerance of leaves to drought stress and contributes to plant-level physiological drought tolerance. Recently, it has been demonstrated that leaf osmotic water potential at full hydration (π<inf>o</inf>) is tightly correlated with π<inf>tlp</inf>. Estimating π<inf>tlp</inf> from osmometer measurements of π<inf>o</inf> is much faster than the standard pressure-volume curve approach of π<inf>tlp</inf> determination. We used this technique to estimate π<inf>tlp</inf> for 165 trees of 71 species, at three sites within forests in French Guiana. Our data set represents a significant increase in available data for this trait for tropical tree species. Tropical trees showed a wider range of drought tolerance than previously found in the literature, π<inf>tlp</inf> ranging from -1·4 to -3·2 MPa. This range likely corresponds in part to adaptation and acclimation to occasionally extreme droughts during the dry season. Leaf-level drought tolerance varied across species, in agreement with the available published observations of species variation in drought-induced mortality. On average, species with a more negative π<inf>tlp</inf> (i.e. with greater leaf-level drought tolerance) occurred less frequently across the region than drought-sensitive species. Across individuals, π<inf>tlp</inf> correlated positively but weakly with leaf toughness (R2 = 0·22, P = 0·04) and leaf thickness (R2 = 0·03, P = 0·03). No correlation was detected with other functional traits (leaf mass per area, leaf area, nitrogen or carbon concentrations, carbon isotope ratio, sapwood density or bark thickness). The variability in π<inf>tlp</inf> among species indicates a potential for highly diverse species responses to drought within given forest communities. Given the weak correlations between π<inf>tlp</inf> and traditionally measured plant functional traits, vegetation models seeking to predict forest response to drought should integrate improved quantification of comparative drought tolerance among tree species. © 2015 British Ecological Society.