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Lamarre, G.P.A.; Decaëns, T.; Rougerie, R.; Barbut, J.; Dewaard, J.R.; Hebert, P.D.N.; Herbin, D.; Laguerre, M.; Thiaucourt, P.; Bonifacio Martins, M. |
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An integrative taxonomy approach unveils unknown and threatened moth species in Amazonian rainforest fragments |
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2016 |
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Insect Conservation and Diversity |
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Insect Conserv Divers |
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9 |
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5 |
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475-479 |
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Amazonian forest; Belém center of endemism; centinelan extinction; conservation; DNA barcoding; Lepidoptera; species discovery |
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This study focuses on the importance in hyperdiverse regions, such as the Amazonian forest, of accelerating and optimising the census of invertebrate communities.
We carried out low-intensity sampling of tropical moth (Lepidoptera) assemblages in disturbed forest fragments in Brazil.
We combined DNA barcoding and taxonomists’ expertise to produce fast and accurate surveys of local diversity, including the recognition and census of undescribed and endemic species.
Integrating expert knowledge of species distributions, we show that despite limited sampling effort, our approach revealed an unexpectedly high number of new and endemic species in severely threatened tropical forest fragments.
These results highlight the risk of silent centinelan extinctions and emphasise the urgent need for accelerated invertebrate surveys in high-endemism and human-impacted tropical forests. |
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EcoFoG @ webmaster @ |
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Odonne, G.; van den Bel, M.; Burst, M.; Brunaux, O.; Bruno, M.; Dambrine, E.; Davy, D.; Desprez, M.; Engel, J.; Ferry, B.; Freycon, V.; Grenand, P.; Jérémie, S.; Mestre, M.; Molino, J.-F.; Petronelli, P.; Sabatier, D.; Hérault, B. |
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Long-term influence of early human occupations on current forests of the Guiana Shield |
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2019 |
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Ecology |
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Ecology |
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100 |
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10 |
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e02806 |
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Amazonian forest; archaeology; ethnobotany; Guiana Shield; historical ecology; pre-Columbian settlements; ring-ditched hills; alluvial plain; anthropogenic effect; archaeology; basal area; database; ethnobotany; forest ecosystem; historical ecology; occupation; paleoecology; species diversity; Amazonia; French Guiana; Guyana Shield; Annonaceae; Arecaceae; Burseraceae; Lauraceae; Lecythidaceae; Brazil; forest; French Guiana; human; occupation; tree; Brazil; Forests; French Guiana; Humans; Occupations; Trees |
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To decipher the long-term influences of pre-Columbian land occupations on contemporary forest structure, diversity, and functioning in Amazonia, most of the previous research focused on the alluvial plains of the major rivers of the Amazon basin. Terra firme, that is, nonflooded forests, particularly from the Guiana Shield, are yet to be explored. In this study, we aim to give new insights into the subtle traces of pre-Columbian influences on present-day forests given the archaeological context of terra firme forests of the Guiana Shield. Following archaeological prospects on 13 sites in French Guiana, we carried out forest inventories inside and outside archaeological sites and assessed the potential pre-Columbian use of the sampled tree species using an original ethnobotanical database of the Guiana Shield region. Aboveground biomass (320 and 380 T/ha, respectively), basal area (25–30 and 30–35 m2/ha, respectively), and tree density (550 and 700 stem/ha, respectively) were all significantly lower on anthropized plots (As) than on nonanthropized plots (NAs). Ancient human presence shaped the species composition of the sampled forests with Arecaceae, Burseraceae, and Lauraceae significantly more frequent in As and Annonaceae and Lecythidaceae more frequent in NAs. Although alpha diversity was not different between As and NAs, the presence of pre-Columbian sites enhances significantly the forest beta diversity at the landscape level. Finally, trees with edible fruits are positively associated with pre-Columbian sites, whereas trees used for construction or for their bark are negatively associated with pre-Columbian sites. Half a millennium after their abandonment, former occupied places from the inner Guiana Shield still bear noticeable differences with nonanthropized places. Considering the lack of data concerning archaeology of terra firme Amazonian forests, our results suggest that pre-Columbian influences on the structure (lower current biomass), diversity (higher beta diversity), and composition (linked to the past human tree uses) of current Amazonian forests might be more important than previously thought. © 2019 by the Ecological Society of America |
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Institut National Polytechnique Félix Houphouet-Boigny (INP-HB), Yamoussoukro, Ivory Coast, Cote d'Ivoire |
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Ecological Society of America |
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00129658 (Issn) |
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EcoFoG @ webmaster @ |
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919 |
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Falkowski, M.; Jahn-Oyac, A.; Odonne, G.; Flora, C.; Estevez, Y.; Touré, S.; Boulogne, I.; Robinson, J.-C.; Béreau, D.; Petit, P.; Azam, D.; Coke, M.; Issaly, J.; Gaborit, P.; Stien, D.; Eparvier, V.; Dusfour, I.; Houël, E. |
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Towards the optimization of botanical insecticides research: Aedes aegypti larvicidal natural products in French Guiana |
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2020 |
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Acta Tropica |
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201 |
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105179 |
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Amazonian chemodiversity; Chemical defense; Culicidae; Mosquito larvicides; Quasi-Poisson generalized linear model; Screening optimization |
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Natural products have proven to be an immeasurable source of bioactive compounds. The exceptional biodiversity encountered in Amazonia, alongside a rich entomofauna and frequent interactions with various herbivores is the crucible of a promising chemodiversity. This prompted us to search for novel botanical insecticides in French Guiana. As this French overseas department faces severe issues linked to insects, notably the strong incidence of vector-borne infectious diseases, we decided to focus our research on products able to control the mosquito Aedes aegypti. We tested 452 extracts obtained from 85 species originating from 36 botanical families and collected in contrasted environments against an Ae. aegypti laboratory strain susceptible to all insecticides, and a natural population resistant to both pyrethroid and organophosphate insecticides collected in Cayenne for the most active of them. Eight species (Maytenus oblongata Reissek, Celastraceae; Costus erythrothyrsus Loes., Costaceae; Humiria balsamifera Aubl., Humiriaceae; Sextonia rubra (Mez) van der Werff, Lauraceae; Piper hispidum Sw., Piperaceae; Laetia procera (Poepp.) Eichl., Salicaceae; Matayba arborescens (Aubl.) Radlk., Sapindaceae; and Cupania scrobitulata Rich., Sapindaceae) led to extracts exhibiting more than 50% larval mortality after 48 h of exposition at 100 µg/mL against the natural population and were considered active. Selectivity and phytochemistry of these extracts were therefore investigated and discussed, and some active compounds highlighted. Multivariate analysis highlighted that solvents, plant tissues, plant family and location had a significant effect on mortality while light, available resources and vegetation type did not. Through this case study we highlighted that plant defensive chemistry mechanisms are crucial while searching for novel insecticidal products. |
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INRS-Institut Armand Frappier, Groupe recherche en écologie microbienne, 531 boulevard des prairies, Laval, QC H7V 1B7, Canada |
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EcoFoG @ webmaster @ |
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888 |
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Engel, J.; Brousseau, L.; Baraloto, C. |
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GuiaTreeKey, a multi-access electronic key to identify tree genera in French Guiana |
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2016 |
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PhytoKeys |
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PhytoKeys |
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68 |
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1 |
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27-44 |
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Amazonia; Electronic key; French Guiana; Morphological characters; Neotropics; Trees identification; Xper2 |
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The tropical rainforest of Amazonia is one of the most species-rich ecosystems on earth, with an estimated 16000 tree species. Due to this high diversity, botanical identification of trees in the Amazon is difficult, even to genus, often requiring the assistance of parataxonomists or taxonomic specialists. Advances in informatics tools offer a promising opportunity to develop user-friendly electronic keys to improve Amazonian tree identification. Here, we introduce an original multi-access electronic key for the identification of 389 tree genera occurring in French Guiana terra-firme forests, based on a set of 79 morphological characters related to vegetative, floral and fruit characters. Its purpose is to help Amazonian tree identification and to support the dissemination of botanical knowledge to non-specialists, including forest workers, students and researchers from other scientific disciplines. The electronic key is accessible with the free access software Xper2, and the database is publicly available on figshare: https://figshare.com/s/75d890b7d707e0ffc9bf (doi: 10.6084/m9.figshare.2682550). © Julien Engel et al. |
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International Center for Tropical Botany, Department of Biological Sciences, Florida International University, 11200 SW 8th Street, Miami, FL, United States |
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Export Date: 8 September 2016 |
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693 |
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Eva, H.D.; Belward, A.S.; De Miranda, E.E.; Di Bella, C.M.; Gond, V.; Huber, O.; Jones, S.; Sgrenzaroli, M.; Fritz, S. |
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A land cover map of South America |
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2004 |
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Global Change Biology |
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Glob. Change Biol. |
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731-744 |
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Amazonia; ecosystems; land cover; mapping; South America; vegetation classes |
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A digital land cover map of South America has been produced using remotely sensed satellite data acquired between 1995 and the year 2000. The mapping scale is defined by the 1 km spatial resolution of the map grid-cell. In order to realize the product, different sources of satellite data were used, each source providing either a particular parameter of land cover characteristic required by the legend, or mapping a particular land cover class. The map legend is designed both to fit requirements for regional climate modelling and for studies on land cover change. The legend is also compatible with a wider, global, land cover mapping exercise, which seeks to characterize the world's land surface for the year 2000. As a first step, the humid forest domain has been validated using a sample of high-resolution satellite images. The map demonstrates both the major incursions of agriculture into the remaining forest domains and the extensive areas of agriculture, which now dominate South America's grasslands. |
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Commiss European Communities, Joint Res Ctr, Inst Environm & Sustainabil, TP 440, I-21020 Ispra, Italy, Email: hugh.eva@jrc.it |
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BLACKWELL PUBLISHING LTD |
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ISI:000221421600015 |
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EcoFoG @ eric.marcon @ |
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Fine, P.V.A.; Metz, M.R.; Lokvam, J.; Mesones, I.; Zuniga, J.M.A.; Lamarre, G.P.A.; Pilco, M.V.; Baraloto, C. |
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Insect herbivores, chemical innovation, and the evolution of habitat specialization in Amazonian trees |
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2013 |
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Ecology |
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Ecology |
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94 |
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1764-1775 |
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Amazonia; Ecological speciation; Ecotypes; Herbivory; Natural enemies; Plant defense; Protium subserratum; Terra firme forests; Tropical rain forests; White-sand forests |
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Herbivores are often implicated in the generation of the extraordinarily diverse tropical flora. One hypothesis linking enemies to plant diversification posits that the evolution of novel defenses allows plants to escape their enemies and expand their ranges. When range expansion involves entering a new habitat type, this could accelerate defense evolution if habitats contain different assemblages of herbivores and/or divergent resource availabilities that affect plant defense allocation. We evaluated this hypothesis by investigating two sister habitat specialist ecotypes of Protium subserratum (Burseraceae), a common Amazonian tree that occurs in white-sand and terra firme forests. We collected insect herbivores feeding on the plants, assessed whether growth differences between habitats were genetically based using a reciprocal transplant experiment, and sampled multiple populations of both lineages for defense chemistry. Protium subserratum plants were attacked mainly by chrysomelid beetles and cicadellid hemipterans. Assemblages of insect herbivores were dissimilar between populations of ecotypes from different habitats, as well as from the same habitat 100 km distant. Populations from terra firme habitats grew significantly faster than white-sand populations; they were taller, produced more leaf area, and had more chlorophyll. White-sand populations expressed more dry mass of secondary compounds and accumulated more flavone glycosides and oxidized terpenes, whereas terra firme populations produced a coumaroylquinic acid that was absent from white-sand populations. We interpret these results as strong evidence that herbivores and resource availability select for divergent types and amounts of defense investment in white-sand and terra firme lineages of Protium subserratum, which may contribute to habitat-mediated speciation in these trees. © 2013 by the Ecological Society of America. |
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Department of Biology, University of Florida, Gainesville, FL 32611, United States |
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Export Date: 30 August 2013; Source: Scopus; Coden: Ecola; doi: 10.1890/12-1920.1; Language of Original Document: English; Correspondence Address: Department of Integrative Biology, 1005 Valley Life Sciences Building 3140, University of California, Berkeley, CA 94720-3140, United States |
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Odonne, G.; Houel, E.; Bourdy, G.; Stien, D. |
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Treating leishmaniasis in Amazonia: A review of ethnomedicinal concepts and pharmaco-chemical analysis of traditional treatments to inspire modern phytotherapies |
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2017 |
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Journal of Ethnopharmacology |
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Journal of Ethnopharmacology |
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199 |
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211-230 |
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Amazonia; Distribution indexes; Ethnomedecine; Interculturality; Leishmaniasis; Medicinal plants; Traditional medicine |
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Ethnopharmacological relevance Cutaneous and mucocutaneous leishmaniasis are neglected tropical diseases that occur in all intertropical regions of the world. Amazonian populations have developed an abundant knowledge of the disease and its remedies. Therefore, we undertook to review traditional antileishmanial plants in Amazonia and have developed new tools to analyze this somewhat dispersed information. Material and methods A literature review of traditional remedies for cutaneous/mucocutaneous leishmaniasis in the Amazon was conducted and the data obtained was used to calculate distribution indexes designed to highlight the most relevant uses in Amazonia. The cultural distribution index represents the distribution rate of a given taxon among different cultural groups and was calculated as the ratio of the number of groups using the taxon to the total number of groups cited. The geographical distribution index allowed us to quantify spatial distribution of a taxon's uses in Amazonia and was calculated geometrically by measuring the average distance between the points where uses have been reported and the barycenter of those points. The general distribution index was defined as an arithmetic combination of the previous two and provides information on both cultural and spatial criteria. Results 475 use reports, concerning 291 botanical species belonging to 83 families have been gathered depicted from 29 sources. Uses concern 34 cultural groups. While the use of some taxa appears to be Pan-Amazonian, some others are clearly restricted to small geographical regions. Particular attention has been paid to the recipes and beliefs surrounding treatments. Topical application of the remedies dominated the other means of administration and this deserves particular attention as the main treatments against Neotropical leishmaniasis are painful systemic injections. The data set was analyzed using the previously defined distribution indexes and the most relevant taxa were further discussed from a phytochemical and pharmacological point of view. Conclusions The Amazonian biodiversity and cultural heritage host a fantastic amount of data whose systematic investigation should allow a better large-scale understanding of the dynamics of traditional therapies and the consequent discovery of therapeutic solutions for neglected diseases. Distribution indices are indeed powerful tools for emphasizing the most relevant treatments against a given disease and should be very useful in the meta-analysis of other regional pharmacopeia. This focus on renowned remedies that have not yet benefitted from extended laboratory studies, could stimulate future research on new treatments of natural origin for leishmaniasis. © 2017 Elsevier Ireland Ltd |
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Sorbonne Universités, UPMC Univ Paris 06, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique, Banyuls-sur-Mer, France |
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Export Date: 27 February 2017 |
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Hérault, B.; Piponiot, C. |
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Key drivers of ecosystem recovery after disturbance in a neotropical forest: Long-term lessons from the Paracou experiment, French Guiana |
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2018 |
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Forest Ecosystems |
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Forest Ecosystems |
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5 |
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2 |
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Amazonia; Carbon fluxes; Climate change; Ecological resilience; Ecosystem modeling; Tropical forests |
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Background: Natural disturbance is a fundamental component of the functioning of tropical rainforests let to natural dynamics, with tree mortality the driving force of forest renewal. With ongoing global (i.e. land-use and climate) changes, tropical forests are currently facing deep and rapid modifications in disturbance regimes that may hamper their recovering capacity so that developing robust predictive model able to predict ecosystem resilience and recovery becomes of primary importance for decision-making: (i) Do regenerating forests recover faster than mature forests given the same level of disturbance? (ii) Is the local topography an important predictor of the post-disturbance forest trajectories? (iii) Is the community functional composition, assessed with community weighted-mean functional traits, a good predictor of carbon stock recovery? (iv) How important is the climate stress (seasonal drought and/or soil water saturation) in shaping the recovery trajectory? Methods: Paracou is a large scale forest disturbance experiment set up in 1984 with nine 6.25 ha plots spanning on a large disturbance gradient where 15 to 60% of the initial forest ecosystem biomass were removed. More than 70,000 trees belonging to ca. 700 tree species have then been censused every 2 years up today. Using this unique dataset, we aim at deciphering the endogenous (forest structure and composition) and exogenous (local environment and climate stress) drivers of ecosystem recovery in time. To do so, we disentangle carbon recovery into demographic processes (recruitment, growth, mortality fluxes) and cohorts (recruited trees, survivors). Results: Variations in the pre-disturbance forest structure or in local environment do not shape significantly the ecosystem recovery rates. Variations in the pre-disturbance forest composition and in the post-disturbance climate significantly change the forest recovery trajectory. Pioneer-rich forests have slower recovery rates than assemblages of late-successional species. Soil water saturation during the wet season strongly impedes ecosystem recovery but not seasonal drought. From a sensitivity analysis, we highlight the pre-disturbance forest composition and the post-disturbance climate conditions as the primary factors controlling the recovery trajectory. Conclusions: Highly-disturbed forests and secondary forests because they are composed of a lot of pioneer species will be less able to cope with new disturbance. In the context of increasing tree mortality due to both (i) severe droughts imputable to climate change and (ii) human-induced perturbations, tropical forest management should focus on reducing disturbances by developing Reduced Impact Logging techniques. |
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Université de la Guyane, UMR EcoFoG (AgroParistech, Cirad, CNRS, Inra, Université des Antilles), Campus Agronomique, Kourou, French Guiana, 97310, France |
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Cited By :1; Export Date: 1 September 2018 |
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Piponiot, C.; Cabon, A.; Descroix, L.; Dourdain, A.; Mazzei, L.; Ouliac, B.; Rutishauser, E.; Sist, P.; Herault, B. |
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A methodological framework to assess the carbon balance of tropical managed forests |
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2016 |
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Carbon Balance and Management |
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Carbon Balance and Management |
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11 |
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1 |
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Amazonia; Carbon cycle; Error propagation; Production forests; Selective logging |
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Background: Managed forests are a major component of tropical landscapes. Production forests as designated by national forest services cover up to 400 million ha, i.e. half of the forested area in the humid tropics. Forest management thus plays a major role in the global carbon budget, but with a lack of unified method to estimate carbon fluxes from tropical managed forests. In this study we propose a new time- and spatially-explicit methodology to estimate the above-ground carbon budget of selective logging at regional scale. Results: The yearly balance of a logging unit, i.e. the elementary management unit of a forest estate, is modelled by aggregating three sub-models encompassing (i) emissions from extracted wood, (ii) emissions from logging damage and deforested areas and (iii) carbon storage from post-logging recovery. Models are parametrised and uncertainties are propagated through a MCMC algorithm. As a case study, we used 38 years of National Forest Inventories in French Guiana, northeastern Amazonia, to estimate the above-ground carbon balance (i.e. the net carbon exchange with the atmosphere) of selectively logged forests. Over this period, the net carbon balance of selective logging in the French Guianan Permanent Forest Estate is estimated to be comprised between 0.12 and 1.33 Tg C, with a median value of 0.64 Tg C. Uncertainties over the model could be diminished by improving the accuracy of both logging damage and large woody necromass decay submodels. Conclusions: We propose an innovating carbon accounting framework relying upon basic logging statistics. This flexible tool allows carbon budget of tropical managed forests to be estimated in a wide range of tropical regions. © 2016 The Author(s). |
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CNRS, UMR EcoFoG, AgroParisTech, Inra, Université de la Guyane, Université des Antilles, Cirad, Campus Agronomique, Kourou, French Guiana |
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Export Date: 1 September 2016 |
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EcoFoG @ webmaster @ |
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688 |
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Herault, B.; Beauchene, J.; Muller, F.; Wagner, F.; Baraloto, C.; Blanc, L.; Martin, J.M. |
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Modeling decay rates of dead wood in a neotropical forest |
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2010 |
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Oecologia |
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Oecologia |
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164 |
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1 |
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243-251 |
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Amazonia; Carbon cycle; Decomposition; Selective logging; Rainforest; Coarse woody debris |
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Variation of dead wood decay rates among tropical trees remains one source of uncertainty in global models of the carbon cycle. Taking advantage of a broad forest plot network surveyed for tree mortality over a 23-year period, we measured the remaining fraction of boles from 367 dead trees from 26 neotropical species widely varying in wood density (0.23-1.24 g cm(-3)) and tree circumference at death time (31.5-272.0 cm). We modeled decay rates within a Bayesian framework assuming a first order differential equation to model the decomposition process and tested for the effects of forest management (selective logging vs. unexploited), of mode of death (standing vs. downed) and of topographical levels (bottomlands vs. hillsides vs. hilltops) on wood decay rates. The general decay model predicts the observed remaining fraction of dead wood (R (2) = 60%) with only two biological predictors: tree circumference at death time and wood specific density. Neither selective logging nor local topography had a differential effect on wood decay rates. Including the mode of death into the model revealed that standing dead trees decomposed faster than downed dead trees, but the gain of model accuracy remains rather marginal. Overall, these results suggest that the release of carbon from tropical dead trees to the atmosphere can be simply estimated using tree circumference at death time and wood density. |
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[Herault, Bruno; Wagner, Fabien; Martin, Jean-Michel] Univ Antilles Guyane, UMR EcoFoG, F-97387 Kourou, France, Email: bruno.herault@ecofog.gf |
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0029-8549 |
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ISI:000280962200023 |
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EcoFoG @ eric.marcon @ |
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45 |
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