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Nicolini, E.; Beauchene, J.; De La Vallee, B.L.; Ruelle, J.; Mangenet, T.; Heuret, P. |
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Title |
Dating branch growth units in a tropical tree using morphological and anatomical markers: The case of Parkia velutina Benoist (Mimosoïdeae) |
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Journal Article |
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2012 |
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Annals of Forest Science |
Abbreviated Journal |
Ann. Forest Sci. |
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69 |
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5 |
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543-555 |
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Crown development; Deciduousness; Dendrochronology; French Guiana; Growth ring; Phenology; Tree architecture; Wood anatomy |
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• Context In tropical areas, studies based on the retrospective analysis of tree development have focused principally on growth ring research. The interpretation of primary growth markers is overlooked although it opens perspectives to provide long time-series on tree-crown development. • Aims This study focused on Parkia velutina, an emergent tree of neotropical rain forests. Our objectives were (1) to characterize the phenological cycle of this species, and (2) to identify temporally interpretable morphological and anatomical markers. • Methods We collected dominant branches in 14 adult trees and identified growth markers that limit longitudinal and radial increments. We coupled this approach with a 2-year phenological survey of 20 trees. • Results Leaf shedding, growth unit elongation and growth ring formation define the phenological cycle. At tree scale, this cycle is synchronous and affects all axes. At population scale, trees can be desynchronized. This cycle is annual despite some slight variability. Successive growth units and growth rings are easily identifiable. • Conclusion Dating a branch by counting the number of growth units or growth rings is possible in many years with a reasonable error. Nevertheless, estimating their precise month of formation in order to study climatic influences remains difficult. © INRA/Springer-Verlag France 2012. |
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INRA, UMR AMAP, TA A-51/PS2, Montpellier 34398, France |
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12864560 (Issn) |
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Export Date: 27 September 2012; Source: Scopus; Coden: Afosf; doi: 10.1007/s13595-011-0172-1; Language of Original Document: English; Correspondence Address: Nicolini, E.; Unité Mixte de Recherche CIRAD-CNRS-INRA-IRD-Université Montpellier 2, BotAnique et BioinforMatique de l'Architecture des Plantes (AMAP), BP 701, Kourou 97387, French Guiana; email: eric-andre.nicolini@cirad.fr |
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EcoFoG @ webmaster @ |
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436 |
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Rutishauser, E.; Barthelemy, D.; Blanc, L.; Nicolini, E.A. |
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Title |
Crown fragmentation assessment in tropical trees: Method, insights and perspectives |
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Journal Article |
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2011 |
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Forest Ecology and Management |
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For. Ecol. Manage. |
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261 |
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3 |
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400-407 |
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Crown assessment; Crown fragmentation; Tree mortality; Forest dynamics |
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Decreasing growth rate (Feeley et al., 2007) and large die-back due to drought (Phillips et al., 2009) suggest that tropical forests are suffering recent climate changes. Forest vulnerability to external factors (e.g. air pollution, acid rain) is widely studied in northern countries, while only a few attempts have investigated crown integrity in the Tropics. The method needs to be generic enough to account for the large number of species and crown shapes encountered in tropical forests. In the present study, we developed and tested a novel field method that estimates crown fragmentation (main branch mortality (MB) and secondary branch mortality (SB)), liana infestation (LI) and crown position (CP) in the canopy. The relationship between crown fragmentation and annual growth rate (agr) was investigated through multiple regression. Six out of eight canopy tree species showed significant growth decline with increasing crown fragmentation. Higher probability of death was also found in trees with severe crown fragmentation. The capacity of such crown assessment to depict tree vitality in a forest stand is discussed along with potential applications in both forest science and management. (C) 2010 Elsevier B.V. All rights reserved. |
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[Rutishauser, Ervan; Eric-Andre, Nicolini] Cirad UMR AMAP, F-34398 Montpellier 5, France, Email: er.rutishauser@gmail.com |
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ELSEVIER SCIENCE BV |
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0378-1127 |
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ISI:000287333000009 |
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EcoFoG @ webmaster @ |
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293 |
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Gourlet-Fleury, S.; Blanc, L.; Picard, N.; Sist, P.; Dick, J.; Nasi, R.; Swaine, M.D.; Forni, E. |
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Grouping species for predicting mixed tropical forest dynamics: looking for a strategy |
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Journal Article |
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2005 |
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Annals of Forest Science |
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Ann. For. Sci. |
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62 |
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8 |
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785-796 |
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cross-comparisons; functional groups; modelling strategy; species classifications |
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The high species diversity of mixed tropical forests hinders the development of forest dynamic models. A solution commonly adopted is to cluster species in groups. There are various methods for grouping species that can be linked to three strategies (i) the ecological subjective strategy, (ii) the ecological data-driven strategy, and (iii) the dynamic process strategy. In the first two strategies a species will be assigned to a single group while in the latter strategy, a specific grouping is defined for each process of population dynamics ( typically based on recruitment, growth, mortality). Little congruency or convergence is observed in the literature between any two classifications of species. This may be explained by the independence between the sets of tree characters used to build species groups, or by the intra-specific variability of these characters. We therefore recommend the dynamic process strategy as the most convenient strategy for building groups of species. |
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Cirad Foret, F-34398 Montpellier, France, Email: sylvie.gourlet-fleury@cirad.fr |
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EDP SCIENCES S A |
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1286-4560 |
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ISI:000233972500001 |
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EcoFoG @ eric.marcon @ |
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228 |
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Soudani, K.; Hmimina, G.; Delpierre, N.; Pontailler, J.-Y.; Aubinet, M.; Bonal, D.; Caquet, B.; de Grandcourt, A.; Burban, B.; Flechard, C.; Guyon, D.; Granier, A.; Gross, P.; Heinesh, B.; Longdoz, B.; Loustau, D.; Moureaux, C.; Ourcival, J.-M.; Rambal, S.; Saint André, L.; Dufrêne, E. |
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Ground-based Network of NDVI measurements for tracking temporal dynamics of canopy structure and vegetation phenology in different biomes |
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Journal Article |
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2012 |
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Remote Sensing of Environment |
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Remote Sens. Environ. |
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123 |
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234-245 |
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Crops; Evergreen and deciduous forests; Ground-based NDVI; Herbaceous savanna; NDVI time-series; Phenology; Tropical rain forest |
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Plant phenology characterises the seasonal cyclicity of biological events such as budburst, flowering, fructification, leaf senescence and leaf fall. These biological events are genetically pre-determined but also strongly modulated by climatic conditions, particularly temperature, daylength and water availability. Therefore, the timing of these events is considered as a good indicator of climate change impacts and as a key parameter for understanding and modelling vegetation-climate interactions. In situ observations, empirical or bioclimatic models and remotely sensed time-series data constitute the three possible ways for monitoring the timing of plant phenological events. Remote sensing has the advantage of being the only way of surface sampling at high temporal frequency and, in the case of satellite-based remote sensing, over large regions. Nevertheless, exogenous factors, particularly atmospheric conditions, lead to some uncertainties on the seasonal course of surface reflectance and cause bias in the identification of vegetation phenological events. Since 2005, a network of forest and herbaceous sites has been equipped with laboratory made NDVI sensors to monitor the temporal dynamics of canopy structure and phenology at an intra-daily time step. In this study, we present recent results obtained in several contrasting biomes in France, French Guiana, Belgium and Congo. These sites represent a gradient of vegetation ecosystems: the main evergreen and deciduous forest ecosystems in temperate climate region, an evergreen tropical rain forest in French Guiana, an herbaceous savanna ecosystem in Congo, and a succession of three annual crops in Belgium. In this paper, (1) we provide an accurate description of the seasonal dynamics of vegetation cover in these different ecosystems (2) we identify the most relevant remotely sensed markers from NDVI time-series for determining the dates of the main phenological events that characterize these ecosystems and (3) we discuss the relationships between temporal canopy dynamics and climate factors. In addition to its importance for phenological studies, this ground-based Network of NDVI measurement provides data needed for the calibration and direct validation of satellite observations and products. © 2012 Elsevier Inc. |
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INRA, Unité Biogéochimie des Ecosystèmes Forestiers, Champenoux, France |
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00344257 (Issn) |
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Export Date: 16 August 2012; Source: Scopus; Coden: Rseea; doi: 10.1016/j.rse.2012.03.012; Language of Original Document: English; Correspondence Address: Soudani, K.; University of Paris-Sud, CNRS, AgroParisTech, Laboratoire Ecologie Systematique et Evolution, Faculty of Sciences of OrsayFrance; email: kamel.soudani@u-psud.fr |
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EcoFoG @ webmaster @ |
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422 |
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Hmimina, G.; Dufrêne, E.; Pontailler, J.-Y.; Delpierre, N.; Aubinet, M.; Caquet, B.; de Grandcourt, A.; Burban, B.; Flechard, C.; Granier, A.; Gross, P.; Heinesch, B.; Longdoz, B.; Moureaux, C.; Ourcival, J.-M.; Rambal, S.; Saint André, L.; Soudani, K. |
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Evaluation of the potential of MODIS satellite data to predict vegetation phenology in different biomes: An investigation using ground-based NDVI measurements |
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2013 |
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Remote Sensing of Environment |
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132 |
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145-158 |
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Crops; Deciduous forests; Evergreen forests; Ground-based NDVI; Modis; Phenology |
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Vegetation phenology is the study of the timing of seasonal events that are considered to be the result of adaptive responses to climate variations on short and long time scales. In the field of remote sensing of vegetation phenology, phenological metrics are derived from time series of optical data. For that purpose, considerable effort has been specifically focused on developing noise reduction and cloud-contaminated data removal techniques to improve the quality of remotely-sensed time series. Comparative studies between time series composed of satellite data acquired under clear and cloudy conditions and from radiometric data obtained with high accuracy from ground-based measurements constitute a direct and effective way to assess the operational use and limitations of remote sensing for predicting the main plant phenological events. In the present paper, we sought to explicitly evaluate the potential use of MODerate resolution Imaging Spectroradiometer (MODIS) remote sensing data for monitoring the seasonal dynamics of different types of vegetation cover that are representative of the major terrestrial biomes, including temperate deciduous forests, evergreen forests, African savannah, and crops. After cloud screening and filtering, we compared the temporal patterns and phenological metrics derived from in situ NDVI time series and from MODIS daily and 16-composite products. We also evaluated the effects of residual noise and the influence of data gaps in MODIS NDVI time series on the identification of the most relevant metrics for vegetation phenology monitoring. The results show that the inflexion points of a model fitted to a MODIS NDVI time series allow accurate estimates of the onset of greenness in the spring and the onset of yellowing in the autumn in deciduous forests (RMSE ≤ one week). Phenological metrics identical to those provided with the MODIS Global Vegetation Phenology product (MDC12Q2) are less robust to data gaps, and they can be subject to large biases of approximately two weeks or more during the autumn phenological transitions. In the evergreen forests, in situ NDVI time series describe the phenology with high fidelity despite small temporal changes in the canopy foliage. However, MODIS is unable to provide consistent phenological patterns. In crops and savannah, MODIS NDVI time series reproduce the general temporal patterns of phenology, but significant discrepancies appear between MODIS and ground-based NDVI time series during very localized periods of time depending on the weather conditions and spatial heterogeneity within the MODIS pixel. In the rainforest, the temporal pattern exhibited by a MODIS 16-day composite NDVI time series is more likely due to a pattern of noise in the NDVI data structure according to both rainy and dry seasons rather than to phenological changes. More investigations are needed, but in all cases, this result leads us to conclude that MODIS time series in tropical rainforests should be interpreted with great caution. © 2013 Elsevier Inc. |
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INRA, Unité Biogéochimie des Ecosystèmes Forestiers, Champenoux, France |
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Export Date: 21 February 2013; Source: Scopus |
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EcoFoG @ webmaster @ |
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467 |
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Baraloto, C.; Forget, P.M. |
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Seed size, seedling morphology, and response to deep shade and damage in neotropical rain forest trees |
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2007 |
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American Journal of Botany |
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Am. J. Bot. |
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94 |
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6 |
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901-911 |
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cotyledons; French Guiana; functional morphology; herbivory; life history; phylogeny; regeneration strategy; shade tolerance |
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To investigate the existence of coordinated sets of seedling traits adapted to contrasting establishment conditions, we examined evolutionary convergence in seedling traits for 299 French Guianan woody plant species and the stress response in a shadehouse of species representing seed size gradients within five major cotyledon morphology types. The French Guianan woody plant community has larger seeds than other tropical forest communities and the largest proportion of hypogeal cotyledon type (59.2%) reported for tropical forests. Yet the community includes many species with intermediate size seeds that produce seedlings with different cotyledonal morphologies. A split-plot factorial design with two light levels (0.8% and 16.1% PAR) and four damage treatments (control, seed damage, leaf damage, stem damage) was used in the shadehouse experiment. Although larger-seeded species had higher survival and slower growth, these patterns were better explained by cotyledon type than by seed mass. Even larger-seeded species with foliar cotyledons grew faster than species with reserve-type cotyledons, and survival after stem grazing was five times higher in seedlings with hypogeal cotyledons than with epigeal cotyledons. Thus, to predict seedling performance using seed size, seedling morphology must also be considered. |
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Inst Natl Rech Agronom, UMR, Ecol Forets Guyane, Kourou, France, Email: baraloto.c@kourou.cirad.fr |
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BOTANICAL SOC AMER INC |
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0002-9122 |
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ISI:000249830600001 |
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EcoFoG @ eric.marcon @ |
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159 |
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Suedile, F.; Robert, F.; Roos, C.; Lebrini, M. |
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Corrosion inhibition of zinc by Mansoa alliacea plant extract in sodium chloride media: Extraction, Characterization and Electrochemical Studies |
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Journal Article |
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2014 |
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Electrochimica Acta |
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Electrochim Acta |
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133 |
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631-638 |
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Corrosion; Inhibition; Mansoa alliacea; sodium chloride; zinc |
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Ethanol extract of Mansoa alliacea was tested as corrosion inhibitor for zinc in NaCl 3% media using polarization and electrochemical impedance spectroscopy (EIS). Potentiodynamic polarization curves indicated that the plant extract behaves as mixed-type inhibitor. Impedance measurements showed that there are two phenomena in the process of inhibition. The results obtained show that this plant extract could serve as an effective inhibitor for the corrosion of zinc in NaCl 3% media. The extract obtained give inhibition around 90%. The experimental data obtained from EIS method show a frequency distribution and therefore a modelling element with frequency dispersion behaviour, a constant phase element (CPEα,Q) has been used. Graphical methods are illustrated by synthetic data to determine the parameter of CPE (α, Q). Polarization curves show that Mansoa alliacea extract affects the anodic and cathodic reactions and the corrosion potential values were shifted to the positive potentials in the presence of the crude extract. Studies on the phytochemical constituents of the total extract were also established. Electrochemical studies, on the chemical families present in the crude extract, were also carried out to find the main constituents responsible for corrosion inhibition properties of the plant extract. © 2014 Elsevier Ltd. |
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Laboratoire Matériaux et Molécules en Milieux Amazonien, UAG – UMR ECOFOG Campus Troubiran, Route de Baduel, 97337 Cayenne, French Guiana |
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Elsevier Ltd |
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00134686 (Issn) |
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Export Date: 18 June 2014; Coden: Elcaa; Correspondence Address: Lebrini, M.; Laboratoire Matériaux et Molécules en Milieux Amazonien, UAG – UMR ECOFOG Campus Troubiran, Route de Baduel, 97337 Cayenne, French Guiana; email: mounim.lebrini@guyane.univ-ag.fr |
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548 |
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Baudrimont, M.; Arini, A.; Guégan, C.; Venel, Z.; Gigault, J.; Pedrono, B.; Prunier, J.; Maurice, L.; Ter Halle, A.; Feurtet-Mazel, A. |
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Ecotoxicity of polyethylene nanoplastics from the North Atlantic oceanic gyre on freshwater and marine organisms (microalgae and filter-feeding bivalves) |
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2020 |
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Environmental Science and Pollution Research |
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Environ. Sci. Pollut. Res. |
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27 |
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4 |
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3746-3755 |
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Cordicula fluminea; Ecotoxicity; Nanoplastics; Polyethylene; Scenedesmus subspicatus; Thalassiosira weissiflogii; bivalve; concentration (composition); ecotoxicology; filter feeder; gyre; microalga; nanoparticle; plastic waste; pollution exposure; polymer; Atlantic Ocean; Atlantic Ocean (North); Bivalvia; Chlorophyta; Corbicula fluminea; Desmodesmus subspicatus; Nitzschia alba; Thalassiosira |
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Each year, 5 to 10 million tons of plastic waste is dumped in the oceans via freshwaters and accumulated in huge oceanic gyres. Under the effect of several abiotic factors, macro plastic wastes (or plastic wastes with macro sizes) are fractionated into microplastics (MP) and finally reach the nanometric size (nanoplastic NP). To reveal potential toxic impacts of these NPs, two microalgae, Scenedemus subspicatus (freshwater green algae), and Thalassiosira weissiflogii (marine diatom) were exposed for up to 48 h at 1, 10, 100, 1000, and 10,000 μg/L to reference polyethylene NPs (PER) or NPs made from polyethylene collected in the North Atlantic gyre (PEN, 7th continent expedition in 2015). Freshwater filter-feeding bivalves, Corbicula fluminea, were exposed to 1000 μg/L of PER and PEN for 48 h to study a possible modification of their filtration or digestion capacity. The results show that PER and PEN do not influence the cell growth of T. weissiflogii, but the PEN exposure causes growth inhibition of S. subspicatus for all exposure concentrations tested. This growth inhibition is enhanced for a higher concentration of PER or PEN (10,000 μg/L) in S. subspicatus. The marine diatom T. weissiflogii appears to be less impacted by plastic pollution than the green algae S. subspicatus for the exposure time. Exposure to NPs does not lead to any alteration of bivalve filtration; however, fecal and pseudo-fecal production increased after PEN exposure, suggesting the implementation of rejection mechanisms for inedible particles. © 2019, Springer-Verlag GmbH Germany, part of Springer Nature. |
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UMR IMRCP 5623, Université Paul Sabatier, CNRS, 118, route de Narbonne, Toulouse, 31062, France |
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Springer |
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Cited By :1; Export Date: 23 March 2020; Coden: Esple; Correspondence Address: Baudrimont, M.; UMR EPOC 5805, Université de Bordeaux—CNRS, Place du Dr Peyneau, France; email: magalie.baudrimont@u-bordeaux.fr |
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EcoFoG @ webmaster @ |
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925 |
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Szilagyi, A.; Scheuring, I.; Edwards, D.P.; Orivel, J.; Yu, D.W. |
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The evolution of intermediate castration virulence and ant coexistence in a spatially structured environment |
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2009 |
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Ecology Letters |
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Ecol. Lett. |
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12 |
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12 |
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1306-1316 |
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Cooperation; evolution of virulence; host-pathogen; mutualism; myrmecophyte; parasite; rock-paper-scissors; spatial games; tolerance; trade-off |
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Theory suggests that spatial structuring should select for intermediate levels of virulence in parasites, but empirical tests are rare and have never been conducted with castration (sterilizing) parasites. To test this theory in a natural landscape, we construct a spatially explicit model of the symbiosis between the ant-plant Cordia nodosa and its two, protecting ant symbionts, Allomerus and Azteca. Allomerus is also a castration parasite, preventing fruiting to increase colony fecundity. Limiting the dispersal of Allomerus and host plant selects for intermediate castration virulence. Increasing the frequency of the mutualist, Azteca, selects for higher castration virulence in Allomerus, because seeds from Azteca-inhabited plants are a public good that Allomerus exploits. These results are consistent with field observations and, to our knowledge, provide the first empirical evidence supporting the hypothesis that spatial structure can reduce castration virulence and the first such evidence in a natural landscape for either mortality or castration virulence. |
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[Edwards, David P.; Yu, Douglas W.] Univ E Anglia, Sch Biol Sci, Norwich NR4 7TJ, Norfolk, England, Email: dougwyu@gmail.com |
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WILEY-BLACKWELL PUBLISHING, INC |
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ISI:000271631500006 |
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De Souza, F.C.; Dexter, K.G.; Phillips, O.L.; Brienen, R.J.W.; Chave, J.; Galbraith, D.R.; Gonzalez, G.L.; Mendoza, A.M.; Toby Pennington, R.; Poorter, L.; Alexiades, M.; Álvarez-Dávila, E.; Andrade, A.; Aragão, L.E.O.C.; Araujo-Murakami, A.; Arets, E.J.M.M.; Aymard C., G.A.; Baraloto, C.; Barroso, J.G.; Bonal, D.; Boot, R.G.A.; Camargo, J.L.C.; Comiskey, J.A.; Valverde, F.C.; De Camargo, P.B.; Di Fiore, A.; Elias, F.; Erwin, T.L.; Feldpausch, T.R.; Ferreira, L.; Fyllas, N.M.; Gloor, E.; Herault, B.; Herrera, R.; Higuchi, N.; Coronado, E.N.H.; Killeen, T.J.; Laurance, W.F.; Laurance, S.; Lloyd, J.; Lovejoy, T.E.; Malhi, Y.; Maracahipes, L.; Marimon, B.S.; Marimon-Junior, B.H.; Mendoza, C.; Morandi, P.; Neill, D.A.; Vargas, P.N.; Oliveira, E.A.; Lenza, E.; Palacios, W.A.; Peñuela-Mora, M.C.; Pipoly, J.J., III; Pitman, N.C.A.; Prieto, A.; Quesada, C.A.; Ramirez-Angulo, H.; Rudas, A.; Ruokolainen, K.; Salomão, R.P.; Silveira, M.; Stropp, J.; Steege, H.T.; Thomas-Caesar, R.; Van Der Hout, P.; Van Der Heijden, G.M.F.; Van Der Meer, P.J.; Vasquez, R.V.; Vieira, S.A.; Vilanova, E.; Vos, V.A.; Wang, O.; Young, K.R.; Zagt, R.J.; Baker, T.R. |
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Evolutionary heritage influences amazon tree ecology |
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2016 |
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Proceedings of the Royal Society B: Biological Sciences |
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Proceedings of the Royal Society B: Biological Sciences |
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283 |
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20161587 |
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Convergent evolution; Divergent selection; Phylogenetic signal; Trait; Tropical tree |
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Lineages tend to retain ecological characteristics of their ancestors through time. However, for some traits, selection during evolutionary history may have also played a role in determining trait values. To address the relative importance of these processes requires large-scale quantification of traits and evolutionary relationships among species. The Amazonian tree flora comprises a high diversity of angiosperm lineages and species with widely differing life-history characteristics, providing an excellent system to investigate the combined influences of evolutionary heritage and selection in determining trait variation. We used trait data related to the major axes of life-history variation among tropical trees (e.g. growth and mortality rates) from 577 inventory plots in closed-canopy forest, mapped onto a phylogenetic hypothesis spanning more than 300 genera including all major angiosperm clades to test for evolutionary constraints on traits. We found significant phylogenetic signal (PS) for all traits, consistent with evolutionarily related genera having more similar characteristics than expected by chance. Although there is also evidence for repeated evolution of pioneer and shade tolerant lifehistory strategies within independent lineages, the existence of significant PS allows clearer predictions of the links between evolutionary diversity, ecosystem function and the response of tropical forests to global change. © 2016 The Authors. |
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Department of Geography and the Environment, University of Texas at Austin, Austin, TX, United States |
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Export Date: 17 January 2017 |
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