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Lang, G.; Marcon, E.; Puech, F. |
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Title |
Distance-based measures of spatial concentration: introducing a relative density function |
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Journal Article |
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Year |
2020 |
Publication |
Annals of Regional Science |
Abbreviated Journal |
Ann. Reg. Sci. |
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Volume |
64 |
Issue |
2 |
Pages |
243-265 |
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Agglomeration; Aggregation; Economic geography; Point patterns; Spatial concentration; accuracy assessment; econometrics; economic activity; economic geography; industrial agglomeration; industrial location; location decision; spatial analysis; spatial distribution |
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For more than a decade, distance-based methods have been widely employed and constantly improved in spatial economics. These methods are a very useful tool for accurately evaluating the spatial distribution of economic activity. We introduce a new distance-based statistical measure for evaluating the spatial concentration of industries. The m function is the first relative density function to be proposed in economics. This tool supplements the typology of distance-based methods recently drawn up by Marcon and Puech (J Econ Geogr 3(4):409–428, 2003). By considering several simulated and real examples, we show the advantages and the limits of the m function for detecting spatial structures in economics. © 2019, Springer-Verlag GmbH Germany, part of Springer Nature. |
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RITM, Univ. Paris-Sud, Université Paris-Saclay and CREST, Sceaux, France |
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05701864 (Issn) |
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EcoFoG @ webmaster @ |
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976 |
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Ziegler, C.; Dusenge, M.E.; Nyirambangutse, B.; Zibera, E.; Wallin, G.; Uddling, J. |
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Title |
Contrasting Dependencies of Photosynthetic Capacity on Leaf Nitrogen in Early- and Late-Successional Tropical Montane Tree Species |
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Journal Article |
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Year |
2020 |
Publication |
Frontiers in Plant Science |
Abbreviated Journal |
Front. Plant Sci. |
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Volume |
11 |
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500479 |
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Keywords |
allocation; early successional; late successional; nitrogen; photosynthesis; tropical montane forests |
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Differences in photosynthetic capacity among tree species and tree functional types are currently assumed to be largely driven by variation in leaf nutrient content, particularly nitrogen (N). However, recent studies indicate that leaf N content is often a poor predictor of variation in photosynthetic capacity in tropical trees. In this study, we explored the relative importance of area-based total leaf N content (Ntot) and within-leaf N allocation to photosynthetic capacity versus light-harvesting in controlling the variation in photosynthetic capacity (i.e. Vcmax, Jmax) among mature trees of 12 species belonging to either early (ES) or late successional (LS) groups growing in a tropical montane rainforest in Rwanda, Central Africa. Photosynthetic capacity at a common leaf temperature of 25˚C (i.e. maximum rates of Rubisco carboxylation, Vcmax25 and of electron transport, Jmax25) was higher in ES than in LS species (+ 58% and 68% for Vcmax25 and Jmax25, respectively). While Ntot did not significantly differ between successional groups, the photosynthetic dependency on Ntot was markedly different. In ES species, Vcmax25 was strongly and positively related to Ntot but this was not the case in LS species. However, there was no significant trade-off between relative leaf N investments in compounds maximizing photosynthetic capacity versus compounds maximizing light harvesting. Both leaf dark respiration at 25˚C (+ 33%) and, more surprisingly, apparent photosynthetic quantum yield (+ 35%) was higher in ES than in LS species. Moreover, Rd25 was positively related to Ntot for both ES and LS species. Our results imply that efforts to quantify carbon fluxes of tropical montane rainforests would be improved if they considered contrasting within-leaf N allocation and photosynthetic Ntot dependencies between species with different successional strategies. © Copyright © 2020 Ziegler, Dusenge, Nyirambangutse, Zibera, Wallin and Uddling. |
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Department of Biology, The University of Western Ontario, London, ON, Canada |
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Frontiers Media S.A. |
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1664462x (Issn) |
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EcoFoG @ webmaster @ |
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953 |
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Levionnois, S.; Coste, S.; Nicolini, E.; Stahl, C.; Morel, H.; Heuret, P. |
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Title |
Scaling of petiole anatomies, mechanics and vasculatures with leaf size in the widespread Neotropical pioneer tree species Cecropia obtusa Trécul (Urticaceae) |
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Journal Article |
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Year |
2020 |
Publication |
Tree physiology |
Abbreviated Journal |
Tree Physiol. |
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Volume |
40 |
Issue |
2 |
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245-258 |
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Keywords |
allometry; leaf size; petiole anatomy; scaling; theoretical hydraulic conductivity; vessel widening; xylem |
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Although the leaf economic spectrum has deepened our understanding of leaf trait variability, little is known about how leaf traits scale with leaf area. This uncertainty has resulted in the assumption that leaf traits should vary by keeping the same pace of variation with increases in leaf area across the leaf size range. We evaluated the scaling of morphological, tissue-surface and vascular traits with overall leaf area, and the functional significance of such scaling. We examined 1,271 leaves for morphological traits, and 124 leaves for anatomical and hydraulic traits, from 38 trees of Cecropia obtusa Trécul (Urticaceae) in French Guiana. Cecropia is a Neotropical genus of pioneer trees that can exhibit large laminas (0.4 m2 for C. obtusa), with leaf size ranging by two orders of magnitude. We measured (i) tissue fractions within petioles and their second moment of area, (ii) theoretical xylem hydraulic efficiency of petioles and (iii) the extent of leaf vessel widening within the hydraulic path. We found that different scaling of morphological trait variability allows for optimisation of lamina display among larger leaves, especially the positive allometric relationship between lamina area and petiole cross-sectional area. Increasing the fraction of pith is a key factor that increases the geometrical effect of supportive tissues on mechanical rigidity and thereby increases carbon-use efficiency. We found that increasing xylem hydraulic efficiency with vessel size results in lower leaf lamina area: xylem ratios, which also results in potential carbon savings for large leaves. We found that the vessel widening is consistent with hydraulic optimisation models. Leaf size variability modifies scaling of leaf traits in this large-leaved species. © The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permission@oup.com. |
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UMR AMAP, CIRAD, CNRS, IRD, Université de Montpellier, Montpellier, 34398, France |
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NLM (Medline) |
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17584469 (Issn) |
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Export Date: 16 March 2020 |
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EcoFoG @ webmaster @ |
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921 |
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Binelli, G.; Montaigne, W.; Sabatier, D.; Scotti-Saintagne, C.; Scotti, I. |
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Discrepancies between genetic and ecological divergence patterns suggest a complex biogeographic history in a Neotropical genus |
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Journal Article |
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Year |
2020 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecology and Evolution |
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Volume |
10 |
Issue |
11 |
Pages |
4726-4738 |
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Keywords |
allopatric divergence; Amazon; Guiana Shield; interspecific gene flow; Myristicaceae; secondary contact; Virola |
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Abstract |
Phylogenetic patterns and the underlying speciation processes can be deduced from morphological, functional, and ecological patterns of species similarity and divergence. In some cases, though, species retain multiple similarities and remain almost indistinguishable; in other cases, evolutionary convergence can make such patterns misleading; very often in such cases, the “true” picture only emerges from carefully built molecular phylogenies, which may come with major surprises. In addition, closely related species may experience gene flow after divergence, thus potentially blurring species delimitation. By means of advanced inferential methods, we studied molecular divergence between species of the Virola genus (Myristicaceae): widespread Virola michelii and recently described, endemic V. kwatae, using widespread V. surinamensis as a more distantly related outgroup with different ecology and morphology—although with overlapping range. Contrary to expectations, we found that the latter, and not V. michelii, was sister to V. kwatae. Therefore, V. kwatae probably diverged from V. surinamensis through a recent morphological and ecological shift, which brought it close to distantly related V. michelii. Through the modeling of the divergence process, we inferred that gene flow between V. surinamensis and V. kwatae stopped soon after their divergence and resumed later, in a classical secondary contact event which did not erase their ecological and morphological differences. While we cannot exclude that initial divergence occurred in allopatry, current species distribution and the absence of geographical barriers make complete isolation during speciation unlikely. We tentatively conclude that (a) it is possible that divergence occurred in allopatry/parapatry and (b) secondary contact did not suppress divergence. © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. |
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INRAE, URFM, Avignon, France |
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John Wiley and Sons Ltd |
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20457758 (Issn) |
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EcoFoG @ webmaster @ |
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963 |
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Longo, M.; Saatchi, S.; Keller, M.; Bowman, K.; Ferraz, A.; Moorcroft, P.R.; Morton, D.C.; Bonal, D.; Brando, P.; Burban, B.; Derroire, G.; dos-Santos, M.N.; Meyer, V.; Saleska, S.; Trumbore, S.; Vincent, G. |
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Title |
Impacts of Degradation on Water, Energy, and Carbon Cycling of the Amazon Tropical Forests |
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Journal Article |
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Year |
2020 |
Publication |
Journal of Geophysical Research: Biogeosciences |
Abbreviated Journal |
J. Geophys. Res. Biogeosci. |
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Volume |
125 |
Issue |
8 |
Pages |
e2020JG005677 |
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Keywords |
Amazon; drought; ecosystem modeling; evapotranspiration; forest degradation; remote sensing; carbon cycle; deforestation; dry season; evapotranspiration; hydrological cycle; logging (timber); net primary production; remote sensing; sensible heat flux; tropical forest; understory; water stress; Amazon River |
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Selective logging, fragmentation, and understory fires directly degrade forest structure and composition. However, studies addressing the effects of forest degradation on carbon, water, and energy cycles are scarce. Here, we integrate field observations and high-resolution remote sensing from airborne lidar to provide realistic initial conditions to the Ecosystem Demography Model (ED-2.2) and investigate how disturbances from forest degradation affect gross primary production (GPP), evapotranspiration (ET), and sensible heat flux (H). We used forest structural information retrieved from airborne lidar samples (13,500 ha) and calibrated with 817 inventory plots (0.25 ha) across precipitation and degradation gradients in the eastern Amazon as initial conditions to ED-2.2 model. Our results show that the magnitude and seasonality of fluxes were modulated by changes in forest structure caused by degradation. During the dry season and under typical conditions, severely degraded forests (biomass loss ≥66%) experienced water stress with declines in ET (up to 34%) and GPP (up to 35%) and increases of H (up to 43%) and daily mean ground temperatures (up to 6.5°C) relative to intact forests. In contrast, the relative impact of forest degradation on energy, water, and carbon cycles markedly diminishes under extreme, multiyear droughts, as a consequence of severe stress experienced by intact forests. Our results highlight that the water and energy cycles in the Amazon are driven by not only climate and deforestation but also the past disturbance and changes of forest structure from degradation, suggesting a much broader influence of human land use activities on the tropical ecosystems. ©2020. The Authors. |
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AMAP, Univ Montpellier, IRD, CIRAD, CNRS, INRAE, Montpellier, France |
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Blackwell Publishing Ltd |
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21698953 (Issn) |
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EcoFoG @ webmaster @ |
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957 |
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Falkowski, M.; Jahn-Oyac, A.; Odonne, G.; Flora, C.; Estevez, Y.; Touré, S.; Boulogne, I.; Robinson, J.-C.; Béreau, D.; Petit, P.; Azam, D.; Coke, M.; Issaly, J.; Gaborit, P.; Stien, D.; Eparvier, V.; Dusfour, I.; Houël, E. |
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Towards the optimization of botanical insecticides research: Aedes aegypti larvicidal natural products in French Guiana |
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Journal Article |
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Year |
2020 |
Publication |
Acta Tropica |
Abbreviated Journal |
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Volume |
201 |
Issue |
105179 |
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Amazonian chemodiversity; Chemical defense; Culicidae; Mosquito larvicides; Quasi-Poisson generalized linear model; Screening optimization |
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Natural products have proven to be an immeasurable source of bioactive compounds. The exceptional biodiversity encountered in Amazonia, alongside a rich entomofauna and frequent interactions with various herbivores is the crucible of a promising chemodiversity. This prompted us to search for novel botanical insecticides in French Guiana. As this French overseas department faces severe issues linked to insects, notably the strong incidence of vector-borne infectious diseases, we decided to focus our research on products able to control the mosquito Aedes aegypti. We tested 452 extracts obtained from 85 species originating from 36 botanical families and collected in contrasted environments against an Ae. aegypti laboratory strain susceptible to all insecticides, and a natural population resistant to both pyrethroid and organophosphate insecticides collected in Cayenne for the most active of them. Eight species (Maytenus oblongata Reissek, Celastraceae; Costus erythrothyrsus Loes., Costaceae; Humiria balsamifera Aubl., Humiriaceae; Sextonia rubra (Mez) van der Werff, Lauraceae; Piper hispidum Sw., Piperaceae; Laetia procera (Poepp.) Eichl., Salicaceae; Matayba arborescens (Aubl.) Radlk., Sapindaceae; and Cupania scrobitulata Rich., Sapindaceae) led to extracts exhibiting more than 50% larval mortality after 48 h of exposition at 100 µg/mL against the natural population and were considered active. Selectivity and phytochemistry of these extracts were therefore investigated and discussed, and some active compounds highlighted. Multivariate analysis highlighted that solvents, plant tissues, plant family and location had a significant effect on mortality while light, available resources and vegetation type did not. Through this case study we highlighted that plant defensive chemistry mechanisms are crucial while searching for novel insecticidal products. |
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INRS-Institut Armand Frappier, Groupe recherche en écologie microbienne, 531 boulevard des prairies, Laval, QC H7V 1B7, Canada |
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EcoFoG @ webmaster @ |
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888 |
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Birer, C.; Moreau, C.S.; Tysklind, N.; Zinger, L.; Duplais, C. |
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Disentangling the assembly mechanisms of ant cuticular bacterial communities of two Amazonian ant species sharing a common arboreal nest |
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Journal Article |
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Year |
2020 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol. Ecol. |
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Volume |
29 |
Issue |
7 |
Pages |
1372-1385 |
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ant gardens; bacterial communities; cuticular microbiome; insect cuticle; metabarcoding |
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Bacteria living on the cuticle of ants are generally studied for their protective role against pathogens, especially in the clade of fungus-growing ants. However, little is known regarding the diversity of cuticular bacteria in other ant host species, as well as the mechanisms leading to the composition of these communities. Here, we used 16S rRNA gene amplicon sequencing to study the influence of host species, species interactions and the pool of bacteria from the environment on the assembly of cuticular bacterial communities on two phylogenetically distant Amazonian ant species that frequently nest together inside the roots system of epiphytic plants, Camponotus femoratus and Crematogaster levior. Our results show that (a) the vast majority of the bacterial community on the cuticle is shared with the nest, suggesting that most bacteria on the cuticle are acquired through environmental acquisition, (b) 5.2% and 2.0% of operational taxonomic units (OTUs) are respectively specific to Ca. femoratus and Cr. levior, probably representing their respective core cuticular bacterial community, and (c) 3.6% of OTUs are shared between the two ant species. Additionally, mass spectrometry metabolomics analysis of metabolites on the cuticle of ants, which excludes the detection of cuticular hydrocarbons produced by the host, were conducted to evaluate correlations among bacterial OTUs and m/z ion mass. Although some positive and negative correlations are found, the cuticular chemical composition was weakly species-specific, suggesting that cuticular bacterial communities are prominently environmentally acquired. Overall, our results suggest the environment is the dominant source of bacteria found on the cuticle of ants. © 2020 John Wiley & Sons Ltd |
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Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, PSL Université Paris, Paris, France |
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Blackwell Publishing Ltd |
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09621083 (Issn) |
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EcoFoG @ webmaster @ |
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975 |
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Dejean, A.; Petitclerc, F.; Azémar, F. |
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Seasonality influences ant-mediated nutrient acquisition (myrmecotrophy) by a Neotropical myrmecophyte |
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Journal Article |
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2020 |
Publication |
Evolutionary Ecology |
Abbreviated Journal |
Evol. Ecol. |
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34 |
Issue |
4 |
Pages |
645-657 |
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Keywords |
Ant-plant relationships; Mutualism; Myrmecophyte; Myrmecotrophy; Phenology; Stable isotopes; ant; herb; host plant; life cycle; myrmecochory; myrmecophyte; Neotropical Region; phenology; seasonality; stable isotope; understory; Gentianaceae; Tachia; Tachia guianensis |
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Tachia guianensis (Gentianaceae), a Neotropical understory myrmecophyte, shelters ant colonies in its hollow trunks and branches (domatia). In turn, it is protected from defoliators and obtains nutrients from ant-produced wastes (myrmecotrophy). Aiming to verify if seasonality influences nitrogen assimilation via ant wastes using the stable isotope nitrogen-15, we first studied Tachia’s phenology and its seasonal leaf production, and then the life cycle of its two more frequent guest ant species. We found that leaf production was much higher during the rainy than the dry season. Mature guest ant colonies produced sexuals regardless of the season and the net weight of the waste piles inside the domatia did not vary between seasons, so that the availability of nutrients to their host plant is steady year-long. By providing the two most frequent mutualistic guest ant species with food enriched with nitrogen-15, we showed that Tachia individuals assimilate more nitrogen from ant wastes during the rainy season, when the plant is physiologically active, compared to the dry season. Thus, one can deduce that the increase in nitrogen assimilation during the rainy season is determined by the increase in Tachia’s physiological activity during that season. Information gathered through a bibliographic compilation confirms that none of the 15 ant species known to be associated with myrmecophytes for which the life cycle was studied is characterized by seasonal reproduction (which would result in fluctuating waste production). The same is true for 49.7% of 167 tropical ant species (seasonal production for the remaining species). We concluded that, in contrast to the non-seasonal ant colony reproductive cycle, Tachia’s phenology determines the myrmecotrophic assimilation rate. © 2020, Springer Nature Switzerland AG. |
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CNRS, UMR EcoFoG, AgroParisTech, CIRAD, INRAE, Université des Antilles, Université de Guyane, Kourou, 97310, France |
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Springer |
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EcoFoG @ webmaster @ |
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956 |
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Privet, K.; Vedel, V.; Fortunel, C.; Orivel, J.; Martinez, Q.; Cerdan, A.; Baraloto, C.; Pétillon, J. |
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Relative effciency of pitfall trapping vs. nocturnal hand collecting in assessing soil-dwelling spider diversity along a structural gradient of neotropical habitats |
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Journal Article |
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2020 |
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Diversity |
Abbreviated Journal |
Diversity |
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12 |
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2 |
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81 |
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Araneae; Diversity indices; Functional diversity; Guiana shield; Sampling methods; Species richness; Turnover; Araneae |
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Assessing spider diversity remains a great challenge, especially in tropical habitats where dozens of species can locally co-occur. Pitfall trapping is one of the most widely used techniques to collect spiders, but it suffers from several biases, and its accuracy likely varies with habitat complexity. In this study, we compared the efficiency of passive pitfall trapping versus active nocturnal hand collecting (\"HC) to capture low understory-dwelling spider taxonomical (morpho-species) and functional (hunting guilds) diversity along a structural gradient of habitats in French Guiana. We focused on four habitats describing a structural gradient: garden to the orchard to the forest edge to the undisturbed forest. Overall, estimated morpho-species richness and composition did not vary consistently between habitats, but abundances of ground-hunting spiders decreased significantly with increasing habitat complexity. We found habitat-dependence differences in taxonomic diversity between sampling strategies: NHC revealed higher diversity in the orchard, whereas pitfalls resulted in higher diversity in the forest. Species turnover resulted in high dissimilarity in species composition between habitats using either method. This study shows how pitfall trapping is influenced by habitat structure, rendering this sampling method incomplete for complex, tropical environments. However, pitfall traps remain a valuable component of inventories because they sample distinct assemblage of spiders. © 2020 by the authors. |
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International Center for Tropical Botany, Department of Biological Sciences, Florida International University, 11200 S.W. 8th Street, Miami, FL 33199, United States |
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Mdpi Ag |
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Export Date: 16 March 2020; Correspondence Address: Privet, K.; CNRS, Ecobio (Ecosystèmes, biodiversité, évolution), Université de RennesFrance; email: kprivet@hotmail.fr |
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EcoFoG @ webmaster @ |
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923 |
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Sardans, J.; Urbina, I.; Grau, O.; Asensio, D.; Ogaya, R.; Peñuelas, J. |
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Long-term drought decreases ecosystem C and nutrient storage in a Mediterranean holm oak forest |
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Journal Article |
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2020 |
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Environmental and Experimental Botany |
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Environ. Exp. Bot. |
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177 |
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104135 |
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Aridity; Carbon stocks; Climate change; Nitrogen; Phosphorus; Potassium; Stoichiometry; carbon sequestration; deciduous forest; drought; experimental study; forest soil; long-term change; Mediterranean environment; net ecosystem exchange; nutrient cycling; shrub; stoichiometry; Mediterranean Sea; Phillyrea latifolia |
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Aridity has increased in recent decades in the Mediterranean Basin and is projected to continue to increase in the coming decades. We studied the consequences of drought on the concentrations, stoichiometries and stocks of carbon (C), nitrogen (N), phosphorus (P) and potassium (K) in leaves, foliar litter of a three dominant woody species and soil of a Mediterranean montane holm oak forest where soil-water content was experimentally reduced (15 % lower than the control plots) for 15 years. Nitrogen stocks were lower in the drought plots than in the control plots (8.81 ± 1.01 kg ha−1 in the forest canopy and 856 ± 120 kg ha−1 in the 0−15 cm soil layer), thus representing 7 and 18 % lower N stocks in the canopy and soil respectively. δ15N was consistently higher under drought conditions in all samples, indicating a general loss of N. Foliar C and K stocks were also lower but to a lesser extent than N. Decreases in biomass and C and N stocks due to drought were smallest for the most dominant tall shrub, Phillyrea latifolia, so our results suggest a lower capacity of this forest to store C and nutrients but also substantial resulting changes in forest structure with increasing drought. © 2020 Elsevier B.V. |
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Cirad, UMR EcoFoG (AgroParisTech, CNRS, Inra, Univ Antilles, Univ Guyane), Campus Agronomique, Kourou, 97310, French Guiana |
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Elsevier B.V. |
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00988472 (Issn) |
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954 |
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