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Author Dezerald, O.; Leroy, C.; Corbara, B.; Dejean, A.; Talaga, S.; Céréghino, R.
Title Environmental drivers of invertebrate population dynamics in Neotropical tank bromeliads Type Journal Article
Year 2017 Publication Freshwater Biology Abbreviated Journal Freshw Biol
Volume 62 Issue 2 Pages 229-242
Keywords food webs; freshwater invertebrates; growth rate; life history; rainforest
Abstract Tank bromeliads form a conspicuous, yet neglected freshwater habitat in Neotropical forests. Recent studies driven by interests in medical entomology, fundamental aspects of bromeliad ecology and experimental research on food webs have, however, prompted increasing interest in bromeliad aquatic ecosystems. As yet, there is nothing in the literature about the life histories and environmental drivers of invertebrate population dynamics in tank bromeliads.

Based on fortnightly samples taken over one year, size frequency plots and individual dry masses allowed us to establish the life cycles and growth rates of the dominant aquatic invertebrates in a common bromeliad species of French Guiana. Linear mixed-effect models and Mantel tests were used to predict changes in density, biomass, and growth rates in relation to temperature, rainfall, humidity and detrital resources.

Annual variations in invertebrate densities and biomasses could be described according to three types of distribution: unimodal, bimodal or almost constant. Despite seasonal variations, precipitation, temperature, relative humidity and detritus concentration accounted significantly for changes in density and biomass, but we found no significant responses in growth rates of most invertebrate species. Species rather displayed non-seasonal life cycles with overlapping cohorts throughout the year. There was also a trend for delayed abundance peaks among congeneric species sharing similar functional traits, suggesting temporal partitioning of available resources.

Beyond novel knowledge, quantitative information on life histories is important to predict food-web dynamics under the influence of external forcing and self-organisation. Our results suggest that changes in species distribution that will affect population dynamics through biotic interactions in space and/or time could have greater effects on food webs and ecosystem functioning than changes in environmental factors per se.
Address
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ISSN (down) 1365-2427 ISBN Medium
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Notes Approved no
Call Number EcoFoG @ webmaster @ Serial 716
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Author Houel, E.; Rodrigues, A.M.S.; Jahn-Oyac, A.; Bessière, J.-M.; Eparvier, V.; Deharo, E.; Stien, D.
Title In vitro antidermatophytic activity of Otacanthus azureus (Linden) Ronse essential oil alone and in combination with azoles Type Journal Article
Year 2014 Publication Journal of Applied Microbiology Abbreviated Journal J. Appl. Microbiol.
Volume 116 Issue 2 Pages 288-294
Keywords Antifungal activity; Azoles; Dermatophytes; Essential oil; Otacanthus azureus; Synergy
Abstract Aims: We determined the chemical composition and investigated the antifungal activity of Otacanthus azureus (Linden) Ronse essential oil (EO) against a range of dermatophytes alone or in combination with azole antifungals. Methods and Results: Aerial parts of the plant were steam-distilled and the obtained oil was analysed by gas chromatography/mass spectrometry and 1H-NMR. It was shown to be largely composed of sesquiterpenes, with the main component being β-copaen-4-α-ol. Using broth microdilution techniques, this oil was found to have remarkable in vitro antifungal activities. Minimum inhibitory concentrations as low as 4 μg ml-1 were recorded. The analysis of the combined effect of the O. azureus EO with azoles using chequerboard assays revealed a synergism between the EO and ketoconazole, fluconazole or itraconazole against Trichophyton mentagrophytes. Notably, the O. azureus essential oil showed low cytotoxicity to VERO cells. Conclusions: The O. azureus essential oil alone or in combination with azoles is a promising antifungal agent in the treatment for human dermatomycoses caused by filamentous fungi. Significance and Impact of the Study: There is much interest in the study of essential oils for the discovery of new antimicrobial drugs. This study has highlighted the antidermatophytic activity of the O. azureus EO. © 2013 The Society for Applied Microbiology.
Address Institut de Recherche pour le Développement (IRD), UMR 152 Pharma-DEV, Toulouse, France
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ISSN (down) 13645072 (Issn) ISBN Medium
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Notes Export Date: 9 February 2014; Source: Scopus; Coden: Jamif; Language of Original Document: English; Correspondence Address: Houël, E.; CNRS – UMR Ecologie des Forêts de Guyane (EcoFoG), Institut Pasteur de la Guyane, 23 Avenue Pasteur, BP6010, 97306 Cayenne Cedex, French Guiana; email: emeline.houel@ecofog.gf Approved no
Call Number EcoFoG @ webmaster @ Serial 526
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Author Duplais, C.; Papon, N.; Courdavault, V.
Title Tracking the Origin and Evolution of Plant Metabolites Type Journal Article
Year 2020 Publication Trends in Plant Science Abbreviated Journal Trends Plant Sci.
Volume 25 Issue 12 Pages 1182-1184
Keywords enzyme evolution; iridoids; Lamiaceae; nepetalactone; plant metabolites
Abstract Iridoids are monoterpenes that are produced by various plants as chemical defense molecules. Lichman et al. recently described the timeline of molecular events that underpin the re-emergence of iridoid biosynthesis in an independent lineage of aromatic plants (catnip). This study represents a benchmark for studying enzyme and metabolite evolution in different clades across the tree of life. © 2020 Elsevier Ltd
Address Biomolécules et Biotechnologies Végétales (BBV) EA 2106, Université de Tours, Tours, France
Corporate Author Thesis
Publisher Elsevier Ltd Place of Publication Editor
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ISSN (down) 13601385 (Issn) ISBN Medium
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Notes Approved no
Call Number EcoFoG @ webmaster @ Serial 937
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Author Rowland, L.; Hill, T.C.; Stahl, C.; Siebicke, L.; Burban, B.; Zaragoza-Castells, J.; Ponton, S.; Bonal, D.; Meir, P.; Williams, M.
Title Evidence for strong seasonality in the carbon storage and carbon use efficiency of an Amazonian forest Type Journal Article
Year 2014 Publication Global Change Biology Abbreviated Journal Global Change Biol.
Volume 20 Issue 3 Pages 979-991
Keywords Carbon use efficiency; Dalec; Data assimilation; Ecosystem respiration; French Guiana; Seasonal carbon fluxes; Tropical forest
Abstract The relative contribution of gross primary production and ecosystem respiration to seasonal changes in the net carbon flux of tropical forests remains poorly quantified by both modelling and field studies. We use data assimilation to combine nine ecological time series from an eastern Amazonian forest, with mass balance constraints from an ecosystem carbon cycle model. The resulting analysis quantifies, with uncertainty estimates, the seasonal changes in the net carbon flux of a tropical rainforest which experiences a pronounced dry season. We show that the carbon accumulation in this forest was four times greater in the dry season than in the wet season and that this was accompanied by a 5% increase in the carbon use efficiency. This seasonal response was caused by a dry season increase in gross primary productivity, in response to radiation and a similar magnitude decrease in heterotrophic respiration, in response to drying soils. The analysis also predicts increased carbon allocation to leaves and wood in the wet season, and greater allocation to fine roots in the dry season. This study demonstrates implementation of seasonal variations in parameters better enables models to simulate observed patterns in data. In particular, we highlight the necessity to simulate the seasonal patterns of heterotrophic respiration to accurately simulate the net carbon flux seasonal tropical forest. © 2013 The Authors Global Change Biology Published by John Wiley & Sons Ltd.
Address Research School of Biology, Division of Plant Sciences, Australian National University, Canberra, ACT, 0200, Australia
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ISSN (down) 13541013 (Issn) ISBN Medium
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Notes Cited By (since 1996):1; Export Date: 24 February 2014; Source: Scopus; Language of Original Document: English; Correspondence Address: Rowland, L.; School of Geosciences, University of Edinburgh, Edinburgh, EH9 3JN, United Kingdom; email: lucy.rowland@ed.ac.uk; Funding Details: FT110100457, ARC, Australian Research Council; Funding Details: NE/F002149/1, NERC, Natural Environment Research Council; Funding Details: NE/J011002/1, NERC, Natural Environment Research Council Approved no
Call Number EcoFoG @ webmaster @ Serial 529
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Author Esquivel-Muelbert, A.; Baker, T.R.; Dexter, K.G.; Lewis, S.L.; Brienen, R.J.W.; Feldpausch, T.R.; Lloyd, J.; Monteagudo-Mendoza, A.; Arroyo, L.; Álvarez-Dávila, E.; Higuchi, N.; Marimon, B.S.; Marimon-Junior, B.H.; Silveira, M.; Vilanova, E.; Gloor, E.; Malhi, Y.; Chave, J.; Barlow, J.; Bonal, D.; Davila Cardozo, N.; Erwin, T.; Fauset, S.; Hérault, B.; Laurance, S.; Poorter, L.; Qie, L.; Stahl, C.; Sullivan, M.J.P.; ter Steege, H.; Vos, V.A.; Zuidema, P.A.; Almeida, E.; Almeida de Oliveira, E.; Andrade, A.; Vieira, S.A.; Aragão, L.; Araujo-Murakami, A.; Arets, E.; Aymard C, G.A.; Baraloto, C.; Camargo, P.B.; Barroso, J.G.; Bongers, F.; Boot, R.; Camargo, J.L.; Castro, W.; Chama Moscoso, V.; Comiskey, J.; Cornejo Valverde, F.; Lola da Costa, A.C.; del Aguila Pasquel, J.; Di Fiore, A.; Fernanda Duque, L.; Elias, F.; Engel, J.; Flores Llampazo, G.; Galbraith, D.; Herrera Fernández, R.; Honorio Coronado, E.; Hubau, W.; Jimenez-Rojas, E.; Lima, A.J.N.; Umetsu, R.K.; Laurance, W.; Lopez-Gonzalez, G.; Lovejoy, T.; Aurelio Melo Cruz, O.; Morandi, P.S.; Neill, D.; Núñez Vargas, P.; Pallqui Camacho, N.C.; Parada Gutierrez, A.; Pardo, G.; Peacock, J.; Peña-Claros, M.; Peñuela-Mora, M.C.; Petronelli, P.; Pickavance, G.C.; Pitman, N.; Prieto, A.; Quesada, C.; Ramírez-Angulo, H.; Réjou-Méchain, M.; Restrepo Correa, Z.; Roopsind, A.; Rudas, A.; Salomão, R.; Silva, N.; Silva Espejo, J.; Singh, J.; Stropp, J.; Terborgh, J.; Thomas, R.; Toledo, M.; Torres-Lezama, A.; Valenzuela Gamarra, L.; van de Meer, P.J.; van der Heijden, G.; van der Hout, P.; Vasquez Martinez, R.; Vela, C.; Vieira, I.C.G.; Phillips, O.L.
Title Compositional response of Amazon forests to climate change Type Journal Article
Year 2019 Publication Global Change Biology Abbreviated Journal Global Change Biol.
Volume 25 Issue 1 Pages 39-56
Keywords bioclimatic niches; climate change; compositional shifts; functional traits; temporal trends; tropical forests; bioclimatology; climate change; floristics; lowland environment; niche; temporal variation; tropical forest; Amazonia; carbon dioxide; water; biodiversity; Brazil; classification; climate change; ecosystem; forest; physiology; season; tree; tropic climate; Biodiversity; Brazil; Carbon Dioxide; Climate Change; Ecosystem; Forests; Seasons; Trees; Tropical Climate; Water
Abstract Most of the planet's diversity is concentrated in the tropics, which includes many regions undergoing rapid climate change. Yet, while climate-induced biodiversity changes are widely documented elsewhere, few studies have addressed this issue for lowland tropical ecosystems. Here we investigate whether the floristic and functional composition of intact lowland Amazonian forests have been changing by evaluating records from 106 long-term inventory plots spanning 30 years. We analyse three traits that have been hypothesized to respond to different environmental drivers (increase in moisture stress and atmospheric CO 2 concentrations): maximum tree size, biogeographic water-deficit affiliation and wood density. Tree communities have become increasingly dominated by large-statured taxa, but to date there has been no detectable change in mean wood density or water deficit affiliation at the community level, despite most forest plots having experienced an intensification of the dry season. However, among newly recruited trees, dry-affiliated genera have become more abundant, while the mortality of wet-affiliated genera has increased in those plots where the dry season has intensified most. Thus, a slow shift to a more dry-affiliated Amazonia is underway, with changes in compositional dynamics (recruits and mortality) consistent with climate-change drivers, but yet to significantly impact whole-community composition. The Amazon observational record suggests that the increase in atmospheric CO 2 is driving a shift within tree communities to large-statured species and that climate changes to date will impact forest composition, but long generation times of tropical trees mean that biodiversity change is lagging behind climate change.
Address Museu Paraense Emílio Goeldi, Pará, Brazil
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Publisher Blackwell Publishing Ltd Place of Publication Editor
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ISSN (down) 13541013 (Issn) ISBN Medium
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Notes Cited By :21; Export Date: 6 January 2020; Correspondence Address: Esquivel-Muelbert, A.; School of Geography, University of LeedsUnited Kingdom; email: adriane.esquivel@gmail.com Approved no
Call Number EcoFoG @ webmaster @ Serial 905
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Author Kattge, J.; Bönisch, G.; Díaz, S.; Lavorel, S.; Prentice, I.C.; Leadley, P.; Tautenhahn, S.; Werner, G.D.A.; Aakala, T.; Abedi, M.; Acosta, A.T.R.; Adamidis, G.C.; Adamson, K.; Aiba, M.; Albert, C.H.; Alcántara, J.M.; Alcázar C, C.; Aleixo, I.; Ali, H.; Amiaud, B.; Ammer, C.; Amoroso, M.M.; Anand, M.; Anderson, C.; Anten, N.; Antos, J.; Apgaua, D.M.G.; Ashman, T.-L.; Asmara, D.H.; Asner, G.P.; Aspinwall, M.; Atkin, O.; Aubin, I.; Baastrup-Spohr, L.; Bahalkeh, K.; Bahn, M.; Baker, T.; Baker, W.J.; Bakker, J.P.; Baldocchi, D.; Baltzer, J.; Banerjee, A.; Baranger, A.; Barlow, J.; Barneche, D.R.; Baruch, Z.; Bastianelli, D.; Battles, J.; Bauerle, W.; Bauters, M.; Bazzato, E.; Beckmann, M.; Beeckman, H.; Beierkuhnlein, C.; Bekker, R.; Belfry, G.; Belluau, M.; Beloiu, M.; Benavides, R.; Benomar, L.; Berdugo-Lattke, M.L.; Berenguer, E.; Bergamin, R.; Bergmann, J.; Bergmann Carlucci, M.; Berner, L.; Bernhardt-Römermann, M.; Bigler, C.; Bjorkman, A.D.; Blackman, C.; Blanco, C.; Blonder, B.; Blumenthal, D.; Bocanegra-González, K.T.; Boeckx, P.; Bohlman, S.; Böhning-Gaese, K.; Boisvert-Marsh, L.; Bond, W.; Bond-Lamberty, B.; Boom, A.; Boonman, C.C.F.; Bordin, K.; Boughton, E.H.; Boukili, V.; Bowman, D.M.J.S.; Bravo, S.; Brendel, M.R.; Broadley, M.R.; Brown, K.A.; Bruelheide, H.; Brumnich, F.; Bruun, H.H.; Bruy, D.; Buchanan, S.W.; Bucher, S.F.; Buchmann, N.; Buitenwerf, R.; Bunker, D.E.; Bürger, J.; Burrascano, S.; Burslem, D.F.R.P.; Butterfield, B.J.; Byun, C.; Marques, M.; Scalon, M.C.; Caccianiga, M.; Cadotte, M.; Cailleret, M.; Camac, J.; Camarero, J.J.; Campany, C.; Campetella, G.; Campos, J.A.; Cano-Arboleda, L.; Canullo, R.; Carbognani, M.; Carvalho, F.; Casanoves, F.; Castagneyrol, B.; Catford, J.A.; Cavender-Bares, J.; Cerabolini, B.E.L.; Cervellini, M.; Chacón-Madrigal, E.; Chapin, K.; Chapin, F.S.; Chelli, S.; Chen, S.-C.; Chen, A.; Cherubini, P.; Chianucci, F.; Choat, B.; Chung, K.-S.; Chytrý, M.; Ciccarelli, D.; Coll, L.; Collins, C.G.; Conti, L.; Coomes, D.; Cornelissen, J.H.C.; Cornwell, W.K.; Corona, P.; Coyea, M.; Craine, J.; Craven, D.; Cromsigt, J.P.G.M.; Csecserits, A.; Cufar, K.; Cuntz, M.; da Silva, A.C.; Dahlin, K.M.; Dainese, M.; Dalke, I.; Dalle Fratte, M.; Dang-Le, A.T.; Danihelka, J.; Dannoura, M.; Dawson, S.; de Beer, A.J.; De Frutos, A.; De Long, J.R.; Dechant, B.; Delagrange, S.; Delpierre, N.; Derroire, G.; Dias, A.S.; Diaz-Toribio, M.H.; Dimitrakopoulos, P.G.; Dobrowolski, M.; Doktor, D.; Dřevojan, P.; Dong, N.; Dransfield, J.; Dressler, S.; Duarte, L.; Ducouret, E.; Dullinger, S.; Durka, W.; Duursma, R.; Dymova, O.; E-Vojtkó, A.; Eckstein, R.L.; Ejtehadi, H.; Elser, J.; Emilio, T.; Engemann, K.; Erfanian, M.B.; Erfmeier, A.; Esquivel-Muelbert, A.; Esser, G.; Estiarte, M.; Domingues, T.F.; Fagan, W.F.; Fagúndez, J.; Falster, D.S.; Fan, Y.; Fang, J.; Farris, E.; Fazlioglu, F.; Feng, Y.; Fernandez-Mendez, F.; Ferrara, C.; Ferreira, J.; Fidelis, A.; Finegan, B.; Firn, J.; Flowers, T.J.; Flynn, D.F.B.; Fontana, V.; Forey, E.; Forgiarini, C.; François, L.; Frangipani, M.; Frank, D.; Frenette-Dussault, C.; Freschet, G.T.; Fry, E.L.; Fyllas, N.M.; Mazzochini, G.G.; Gachet, S.; Gallagher, R.; Ganade, G.; Ganga, F.; García-Palacios, P.; Gargaglione, V.; Garnier, E.; Garrido, J.L.; de Gasper, A.L.; Gea-Izquierdo, G.; Gibson, D.; Gillison, A.N.; Giroldo, A.; Glasenhardt, M.-C.; Gleason, S.; Gliesch, M.; Goldberg, E.; Göldel, B.; Gonzalez-Akre, E.; Gonzalez-Andujar, J.L.; González-Melo, A.; González-Robles, A.; Graae, B.J.; Granda, E.; Graves, S.; Green, W.A.; Gregor, T.; Gross, N.; Guerin, G.R.; Günther, A.; Gutiérrez, A.G.; Haddock, L.; Haines, A.; Hall, J.; Hambuckers, A.; Han, W.; Harrison, S.P.; Hattingh, W.; Hawes, J.E.; He, T.; He, P.; Heberling, J.M.; Helm, A.; Hempel, S.; Hentschel, J.; Hérault, B.; Hereş, A.-M.; Herz, K.; Heuertz, M.; Hickler, T.; Hietz, P.; Higuchi, P.; Hipp, A.L.; Hirons, A.; Hock, M.; Hogan, J.A.; Holl, K.; Honnay, O.; Hornstein, D.; Hou, E.; Hough-Snee, N.; Hovstad, K.A.; Ichie, T.; Igić, B.; Illa, E.; Isaac, M.; Ishihara, M.; Ivanov, L.; Ivanova, L.; Iversen, C.M.; Izquierdo, J.; Jackson, R.B.; Jackson, B.; Jactel, H.; Jagodzinski, A.M.; Jandt, U.; Jansen, S.; Jenkins, T.; Jentsch, A.; Jespersen, J.R.P.; Jiang, G.-F.; Johansen, J.L.; Johnson, D.; Jokela, E.J.; Joly, C.A.; Jordan, G.J.; Joseph, G.S.; Junaedi, D.; Junker, R.R.; Justes, E.; Kabzems, R.; Kane, J.; Kaplan, Z.; Kattenborn, T.; Kavelenova, L.; Kearsley, E.; Kempel, A.; Kenzo, T.; Kerkhoff, A.; Khalil, M.I.; Kinlock, N.L.; Kissling, W.D.; Kitajima, K.; Kitzberger, T.; Kjøller, R.; Klein, T.; Kleyer, M.; Klimešová, J.; Klipel, J.; Kloeppel, B.; Klotz, S.; Knops, J.M.H.; Kohyama, T.; Koike, F.; Kollmann, J.; Komac, B.; Komatsu, K.; König, C.; Kraft, N.J.B.; Kramer, K.; Kreft, H.; Kühn, I.; Kumarathunge, D.; Kuppler, J.; Kurokawa, H.; Kurosawa, Y.; Kuyah, S.; Laclau, J.-P.; Lafleur, B.; Lallai, E.; Lamb, E.; Lamprecht, A.; Larkin, D.J.; Laughlin, D.; Le Bagousse-Pinguet, Y.; le Maire, G.; le Roux, P.C.; le Roux, E.; Lee, T.; Lens, F.; Lewis, S.L.; Lhotsky, B.; Li, Y.; Li, X.; Lichstein, J.W.; Liebergesell, M.; Lim, J.Y.; Lin, Y.-S.; Linares, J.C.; Liu, C.; Liu, D.; Liu, U.; Livingstone, S.; Llusià, J.; Lohbeck, M.; López-García, Á.; Lopez-Gonzalez, G.; Lososová, Z.; Louault, F.; Lukács, B.A.; Lukeš, P.; Luo, Y.; Lussu, M.; Ma, S.; Maciel Rabelo Pereira, C.; Mack, M.; Maire, V.; Mäkelä, A.; Mäkinen, H.; Malhado, A.C.M.; Mallik, A.; Manning, P.; Manzoni, S.; Marchetti, Z.; Marchino, L.; Marcilio-Silva, V.; Marcon, E.; Marignani, M.; Markesteijn, L.; Martin, A.; Martínez-Garza, C.; Martínez-Vilalta, J.; Mašková, T.; Mason, K.; Mason, N.; Massad, T.J.; Masse, J.; Mayrose, I.; McCarthy, J.; McCormack, M.L.; McCulloh, K.; McFadden, I.R.; McGill, B.J.; McPartland, M.Y.; Medeiros, J.S.; Medlyn, B.; Meerts, P.; Mehrabi, Z.; Meir, P.; Melo, F.P.L.; Mencuccini, M.; Meredieu, C.; Messier, J.; Mészáros, I.; Metsaranta, J.; Michaletz, S.T.; Michelaki, C.; Migalina, S.; Milla, R.; Miller, J.E.D.; Minden, V.; Ming, R.; Mokany, K.; Moles, A.T.; Molnár, A., V; Molofsky, J.; Molz, M.; Montgomery, R.A.; Monty, A.; Moravcová, L.; Moreno-Martínez, A.; Moretti, M.; Mori, A.S.; Mori, S.; Morris, D.; Morrison, J.; Mucina, L.; Mueller, S.; Muir, C.D.; Müller, S.C.; Munoz, F.; Myers-Smith, I.H.; Myster, R.W.; Nagano, M.; Naidu, S.; Narayanan, A.; Natesan, B.; Negoita, L.; Nelson, A.S.; Neuschulz, E.L.; Ni, J.; Niedrist, G.; Nieto, J.; Niinemets, Ü.; Nolan, R.; Nottebrock, H.; Nouvellon, Y.; Novakovskiy, A.; Nystuen, K.O.; O'Grady, A.; O'Hara, K.; O'Reilly-Nugent, A.; Oakley, S.; Oberhuber, W.; Ohtsuka, T.; Oliveira, R.; Öllerer, K.; Olson, M.E.; Onipchenko, V.; Onoda, Y.; Onstein, R.E.; Ordonez, J.C.; Osada, N.; Ostonen, I.; Ottaviani, G.; Otto, S.; Overbeck, G.E.; Ozinga, W.A.; Pahl, A.T.; Paine, C.E.T.; Pakeman, R.J.; Papageorgiou, A.C.; Parfionova, E.; Pärtel, M.; Patacca, M.; Paula, S.; Paule, J.; Pauli, H.; Pausas, J.G.; Peco, B.; Penuelas, J.; Perea, A.; Peri, P.L.; Petisco-Souza, A.C.; Petraglia, A.; Petritan, A.M.; Phillips, O.L.; Pierce, S.; Pillar, V.D.; Pisek, J.; Pomogaybin, A.; Poorter, H.; Portsmuth, A.; Poschlod, P.; Potvin, C.; Pounds, D.; Powell, A.S.; Power, S.A.; Prinzing, A.; Puglielli, G.; Pyšek, P.; Raevel, V.; Rammig, A.; Ransijn, J.; Ray, C.A.; Reich, P.B.; Reichstein, M.; Reid, D.E.B.; Réjou-Méchain, M.; de Dios, V.R.; Ribeiro, S.; Richardson, S.; Riibak, K.; Rillig, M.C.; Riviera, F.; Robert, E.M.R.; Roberts, S.; Robroek, B.; Roddy, A.; Rodrigues, A.V.; Rogers, A.; Rollinson, E.; Rolo, V.; Römermann, C.; Ronzhina, D.; Roscher, C.; Rosell, J.A.; Rosenfield, M.F.; Rossi, C.; Roy, D.B.; Royer-Tardif, S.; Rüger, N.; Ruiz-Peinado, R.; Rumpf, S.B.; Rusch, G.M.; Ryo, M.; Sack, L.; Saldaña, A.; Salgado-Negret, B.; Salguero-Gomez, R.; Santa-Regina, I.; Santacruz-García, A.C.; Santos, J.; Sardans, J.; Schamp, B.; Scherer-Lorenzen, M.; Schleuning, M.; Schmid, B.; Schmidt, M.; Schmitt, S.; Schneider, J.V.; Schowanek, S.D.; Schrader, J.; Schrodt, F.; Schuldt, B.; Schurr, F.; Selaya Garvizu, G.; Semchenko, M.; Seymour, C.; Sfair, J.C.; Sharpe, J.M.; Sheppard, C.S.; Sheremetiev, S.; Shiodera, S.; Shipley, B.; Shovon, T.A.; Siebenkäs, A.; Sierra, C.; Silva, V.; Silva, M.; Sitzia, T.; Sjöman, H.; Slot, M.; Smith, N.G.; Sodhi, D.; Soltis, P.; Soltis, D.; Somers, B.; Sonnier, G.; Sørensen, M.V.; Sosinski, E.E., Jr.; Soudzilovskaia, N.A.; Souza, A.F.; Spasojevic, M.; Sperandii, M.G.; Stan, A.B.; Stegen, J.; Steinbauer, K.; Stephan, J.G.; Sterck, F.; Stojanovic, D.B.; Strydom, T.; Suarez, M.L.; Svenning, J.-C.; Svitková, I.; Svitok, M.; Svoboda, M.; Swaine, E.; Swenson, N.; Tabarelli, M.; Takagi, K.; Tappeiner, U.; Tarifa, R.; Tauugourdeau, S.; Tavsanoglu, C.; te Beest, M.; Tedersoo, L.; Thiffault, N.; Thom, D.; Thomas, E.; Thompson, K.; Thornton, P.E.; Thuiller, W.; Tichý, L.; Tissue, D.; Tjoelker, M.G.; Tng, D.Y.P.; Tobias, J.; Török, P.; Tarin, T.; Torres-Ruiz, J.M.; Tóthmérész, B.; Treurnicht, M.; Trivellone, V.; Trolliet, F.; Trotsiuk, V.; Tsakalos, J.L.; Tsiripidis, I.; Tysklind, N.; Umehara, T.; Usoltsev, V.; Vadeboncoeur, M.; Vaezi, J.; Valladares, F.; Vamosi, J.; van Bodegom, P.M.; van Breugel, M.; Van Cleemput, E.; van de Weg, M.; van der Merwe, S.; van der Plas, F.; van der Sande, M.T.; van Kleunen, M.; Van Meerbeek, K.; Vanderwel, M.; Vanselow, K.A.; Vårhammar, A.; Varone, L.; Vasquez Valderrama, M.Y.; Vassilev, K.; Vellend, M.; Veneklaas, E.J.; Verbeeck, H.; Verheyen, K.; Vibrans, A.; Vieira, I.; Villacís, J.; Violle, C.; Vivek, P.; Wagner, K.; Waldram, M.; Waldron, A.; Walker, A.P.; Waller, M.; Walther, G.; Wang, H.; Wang, F.; Wang, W.; Watkins, H.; Watkins, J.; Weber, U.; Weedon, J.T.; Wei, L.; Weigelt, P.; Weiher, E.; Wells, A.W.; Wellstein, C.; Wenk, E.; Westoby, M.; Westwood, A.; White, P.J.; Whitten, M.; Williams, M.; Winkler, D.E.; Winter, K.; Womack, C.; Wright, I.J.; Wright, S.J.; Wright, J.; Pinho, B.X.; Ximenes, F.; Yamada, T.; Yamaji, K.; Yanai, R.; Yankov, N.; Yguel, B.; Zanini, K.J.; Zanne, A.E.; Zelený, D.; Zhao, Y.-P.; Zheng, J.; Zheng, J.; Ziemińska, K.; Zirbel, C.R.; Zizka, G.; Zo-Bi, I.C.; Zotz, G.; Wirth, C.; The Nutrient Network
Title TRY plant trait database – enhanced coverage and open access Type Journal Article
Year 2020 Publication Global Change Biol. Abbreviated Journal Global Change Biol.
Volume 26 Issue 1 Pages 119-188
Keywords data coverage; data integration; data representativeness; functional diversity; plant traits; TRY plant trait database; biodiversity; data processing; database; ecological modeling; environmental factor; growth; intraspecific competition; access to information; biodiversity; ecology; ecosystem; plant; Access to Information; Biodiversity; Ecology; Ecosystem; Plants
Abstract Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits—almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.
Address Institute for Biology and Environmental Sciences, University Oldenburg, Oldenburg, Germany
Corporate Author Thesis
Publisher Blackwell Publishing Ltd Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN (down) 13541013 (Issn) ISBN Medium
Area Expedition Conference
Notes Approved no
Call Number EcoFoG @ webmaster @ Serial 918
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Author Schwalm, C.R.; Williams, C.A.; Schaefer, K.; Arneth, A.; Bonal, D.; Buchmann, N.; Chen, J.Q.; Law, B.E.; Lindroth, A.; Luyssaert, S.; Reichstein, M.; Richardson, A.D.
Title Assimilation exceeds respiration sensitivity to drought: A FLUXNET synthesis Type Journal Article
Year 2010 Publication Global Change Biology Abbreviated Journal Glob. Change Biol.
Volume 16 Issue 2 Pages 657-670
Keywords biome; carbon cycling; drought; eddy covariance; evaporative fraction; FLUXNET; synthesis
Abstract The intensification of the hydrological cycle, with an observed and modeled increase in drought incidence and severity, underscores the need to quantify drought effects on carbon cycling and the terrestrial sink. FLUXNET, a global network of eddy covariance towers, provides dense data streams of meteorological data, and through flux partitioning and gap filling algorithms, estimates of net ecosystem productivity (F-NEP), gross ecosystem productivity (P), and ecosystem respiration (R). We analyzed the functional relationship of these three carbon fluxes relative to evaporative fraction (EF), an index of drought and site water status, using monthly data records from 238 micrometeorological tower sites distributed globally across 11 biomes. The analysis was based on relative anomalies of both EF and carbon fluxes and focused on drought episodes by biome and climatic season. Globally P was approximate to 50% more sensitive to a drought event than R. Network-wide drought-induced decreases in carbon flux averaged -16.6 and -9.3 g C m-2 month-1 for P and R, i.e., drought events induced a net decline in the terrestrial sink. However, in evergreen forests and wetlands drought was coincident with an increase in P or R during parts of the growing season. The most robust relationships between carbon flux and EF occurred during climatic spring for F-NEP and in climatic summer for P and R. Upscaling flux sensitivities to a global map showed that spatial patterns for all three carbon fluxes were linked to the distribution of croplands. Agricultural areas exhibited the highest sensitivity whereas the tropical region had minimal sensitivity to drought. Combining gridded flux sensitivities with their uncertainties and the spatial grid of FLUXNET revealed that a more robust quantification of carbon flux response to drought requires additional towers in all biomes of Africa and Asia as well as in the cropland, shrubland, savannah, and wetland biomes globally.
Address [Schwalm, Christopher R.; Williams, Christopher A.] Clark Univ, Grad Sch Geog, Worcester, MA 01610 USA, Email: cschwalm@clarku.edu
Corporate Author Thesis
Publisher WILEY-BLACKWELL PUBLISHING, INC Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN (down) 1354-1013 ISBN Medium
Area Expedition Conference
Notes ISI:000274419400014 Approved no
Call Number EcoFoG @ eric.marcon @ Serial 69
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Author Fisher, J.B.; Malhi, Y.; Bonal, D.; Da Rocha, H.R.; De Araujo, A.C.; Gamo, M.; Goulden, M.L.; Hirano, T.; Huete, A.R.; Kondo, H.; Kumagai, T.; Loescher, H.W.; Miller, S.; Nobre, A.D.; Nouvellon, Y.; Oberbauer, S.F.; Panuthai, S.; Roupsard, O.; Saleska, S.; Tanaka, K.; Tanaka, N.; Tu, K.P.; Von Randow, C.
Title The land-atmosphere water flux in the tropics Type Journal Article
Year 2009 Publication Global Change Biology Abbreviated Journal Glob. Change Biol.
Volume 15 Issue 11 Pages 2694-2714
Keywords Amazon; eddy covariance; evaporation; evapotranspiration; ISLSCP-II; LBA; model; remote sensing; tropical
Abstract Tropical vegetation is a major source of global land surface evapotranspiration, and can thus play a major role in global hydrological cycles and global atmospheric circulation. Accurate prediction of tropical evapotranspiration is critical to our understanding of these processes under changing climate. We examined the controls on evapotranspiration in tropical vegetation at 21 pan-tropical eddy covariance sites, conducted a comprehensive and systematic evaluation of 13 evapotranspiration models at these sites, and assessed the ability to scale up model estimates of evapotranspiration for the test region of Amazonia. Net radiation was the strongest determinant of evapotranspiration (mean evaporative fraction was 0.72) and explained 87% of the variance in monthly evapotranspiration across the sites. Vapor pressure deficit was the strongest residual predictor (14%), followed by normalized difference vegetation index (9%), precipitation (6%) and wind speed (4%). The radiation-based evapotranspiration models performed best overall for three reasons: (1) the vegetation was largely decoupled from atmospheric turbulent transfer (calculated from X decoupling factor), especially at the wetter sites; (2) the resistance-based models were hindered by difficulty in consistently characterizing canopy (and stomatal) resistance in the highly diverse vegetation; (3) the temperature-based models inadequately captured the variability in tropical evapotranspiration. We evaluated the potential to predict regional evapotranspiration for one test region: Amazonia. We estimated an Amazonia-wide evapotranspiration of 1370 mm yr(-1), but this value is dependent on assumptions about energy balance closure for the tropical eddy covariance sites; a lower value (1096 mm yr(-1)) is considered in discussion on the use of flux data to validate and interpolate models.
Address [Fisher, Joshua B.; Malhi, Yadvinder] Univ Oxford, Environm Change Inst, Sch Geog & Environm, Oxford OX1 3QY, England, Email: joshbfisher@gmail.com
Corporate Author Thesis
Publisher WILEY-BLACKWELL PUBLISHING, INC Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN (down) 1354-1013 ISBN Medium
Area Expedition Conference
Notes ISI:000270662000011 Approved no
Call Number EcoFoG @ eric.marcon @ Serial 101
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Author Malhi, Y.; Aragao, L.E.O.C.; Metcalfe, D.B.; Paiva, R.; Quesada, C.A.; Almeida, S.; Anderson, L.; Brando, P.; Chambers, J.Q.; da Costa, A.C.L.; Hutyra, L.R.; Oliveira, P.; Patino, S.; Pyle, E.H.; Robertson, A.L.; Teixeira, L.M.
Title Comprehensive assessment of carbon productivity, allocation and storage in three Amazonian forests Type Journal Article
Year 2009 Publication Global Change Biology Abbreviated Journal Glob. Change Biol.
Volume 15 Issue 5 Pages 1255-1274
Keywords allocation; Amazonia; carbon; growth; litterfall; productivity; respiration; roots; soil; tropical forest
Abstract The allocation and cycling of carbon (C) within forests is an important component of the biospheric C cycle, but is particularly understudied within tropical forests. We synthesise reported and unpublished results from three lowland rainforest sites in Amazonia (in the regions of Manaus, Tapajos and Caxiuana), all major sites of the Large-Scale Biosphere-Atmosphere Programme (LBA). We attempt a comprehensive synthesis of the C stocks, nutrient status and, particularly, the allocation and internal C dynamics of all three sites. The calculated net primary productivities (NPP) are 10.1 +/- 1.4 Mg C ha(-1) yr(-1) (Manaus), 14.4 +/- 1.3 Mg C ha(-1) yr(-1) (Tapajos) and 10.0 +/- 1.2 Mg C ha(-1) yr(-1) (Caxiuana). All errors bars report standard errors. Soil and leaf nutrient analyses indicate that Tapajos has significantly more plant-available phosphorus and calcium. Autotrophic respiration at all three sites (14.9-21.4 Mg C ha yr(-1)) is more challenging to measure, with the largest component and greatest source of uncertainty being leaf dark respiration. Comparison of measured soil respiration with that predicted from C cycling measurements provides an independent constraint. It shows general good agreement at all three sites, with perhaps some evidence for measured soil respiration being less than expected. Twenty to thirty percent of fixed C is allocated belowground. Comparison of gross primary productivity (GPP), derived from ecosystem flux measurements with that derived from component studies (NPP plus autotrophic respiration) provides an additional crosscheck. The two approaches are in good agreement, giving increased confidence in both approaches to estimating GPP. The ecosystem carbon-use efficiency (CUEs), the ratio of NPP to GPP, is similar at Manaus (0.34 +/- 0.10) and Caxiuana (0.32 +/- 0.07), but may be higher at Tapajos (0.49 +/- 0.16), although the difference is not significant. Old growth or infertile tropical forests may have low CUE compared with recently disturbed and/or fertile forests.
Address [Malhi, Yadvinder; Aragao, Luiz Eduardo O. C.; Metcalfe, Daniel B.; Anderson, Liana] Sch Geog & Environm, Environm Change Inst, Oxford OX1 3QY, England, Email: yadvinder.malhi@ouce.ox.ac.uk
Corporate Author Thesis
Publisher WILEY-BLACKWELL PUBLISHING, INC Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN (down) 1354-1013 ISBN Medium
Area Expedition Conference
Notes ISI:000265033700015 Approved no
Call Number EcoFoG @ eric.marcon @ Serial 117
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Author Bonal, D.; Bosc, A.; Ponton, S.; Goret, J.Y.; Burban, B.; Gross, P.; Bonnefond, J.M.; Elbers, J.; Longdoz, B.; Epron, D.; Guehl, J.M.; Granier, A.
Title Impact of severe dry season on net ecosystem exchange in the Neotropical rainforest of French Guiana Type Journal Article
Year 2008 Publication Global Change Biology Abbreviated Journal Glob. Change Biol.
Volume 14 Issue 8 Pages 1917-1933
Keywords dry season; ecosystem respiration; eddy covariance; gross ecosystem productivity; Neotropical rainforest; net ecosystem productivity; soil drought; solar radiation
Abstract The lack of information on the ways seasonal drought modifies the CO2 exchange between Neotropical rainforest ecosystems and the atmosphere and the resulting carbon balance hinders our ability to precisely predict how these ecosystems will respond as global environmental changes force them to face increasingly contrasting conditions in the future. To address this issue, seasonal variations in daily net ecosystem productivity (NEPd) and two main components of this productivity, daily total ecosystem respiration (R-Ed) and daily gross ecosystem productivity (GEP(d)), were estimated over 2 years at a flux tower site in French Guiana, South America (5 degrees 16'54'N, 52 degrees 54'44'W). We compared seasonal variations between wet and dry periods and between dry periods of contrasting levels of intensity (i.e. mild vs. severe) during equivalent 93-day periods. During the wet periods, the ecosystem was almost in balance with the atmosphere (storage of 9.0 g C m(-2)). Seasonal dry periods, regardless of their severity, are associated with higher incident radiation and lower R-Ed combined with reduced soil respiration associated with low soil water availability. During the mild dry period, as is normally the case in this region, the amount of carbon stored in the ecosystem was 32.7 g C m(-2). Severe drought conditions resulted in even lower R-Ed, whereas the photosynthetic activity was only moderately reduced and no change in canopy structure was observed. Thus, the severe dry period was characterized by greater carbon storage (64.6 g C m(-2)), emphasizing that environmental conditions, such as during a severe drought, modify the CO2 exchange between Neotropical rainforest ecosystems and the atmosphere and potentially the resulting carbon balance.
Address [Bonal, Damien; Goret, Jean-Yves; Burban, Benoit] INRA, UMR Ecol Forets Guyane, Kourou 97387, French Guiana, Email: damien.bonal@kourou.cirad.fr
Corporate Author Thesis
Publisher BLACKWELL PUBLISHING Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN (down) 1354-1013 ISBN Medium
Area Expedition Conference
Notes ISI:000257712400015 Approved no
Call Number EcoFoG @ eric.marcon @ Serial 133
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