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Levis, C., Costa, F. R. C., Bongers, F., Peña-Claros, M., Clement, C. R., Junqueira, A. B., et al. (2017). Persistent effects of pre-Columbian plant domestication on Amazonian forest composition. Science, 355(6328), 925–931.
Abstract: The marks of prehistoric human societies on tropical forests can still be detected today. Levis et al. performed a basin-wide comparison of plant distributions, archaeological sites, and environmental data. Plants domesticated by pre-Columbian peoples are much more likely to be dominant in Amazonian forests than other species. Furthermore, forests close to archaeological sites often have a higher abundance and richness of domesticated species. Thus, modern-day Amazonian tree communities across the basin remain largely structured by historical human use.Science, this issue p. 925The extent to which pre-Columbian societies altered Amazonian landscapes is hotly debated. We performed a basin-wide analysis of pre-Columbian impacts on Amazonian forests by overlaying known archaeological sites in Amazonia with the distributions and abundances of 85 woody species domesticated by pre-Columbian peoples. Domesticated species are five times more likely than nondomesticated species to be hyperdominant. Across the basin, the relative abundance and richness of domesticated species increase in forests on and around archaeological sites. In southwestern and eastern Amazonia, distance to archaeological sites strongly influences the relative abundance and richness of domesticated species. Our analyses indicate that modern tree communities in Amazonia are structured to an important extent by a long history of plant domestication by Amazonian peoples.
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Talaga, S., Dejean, A., Azémar, F., Dumont, Y., & Leroy, C. (2020). Impacts of biotic and abiotic parameters on immature populations of Aedes aegypti. J. Pest Sci., 93(3), 941–952.
Abstract: In recent centuries, the mosquito Aedes aegypti has spread into most urban areas throughout the tropics. This species is considered the main vector of the chikungunya, dengue, yellow fever and Zika viruses and causes major public health issues. The aim of this study is to investigate the relative influence of biotic and abiotic parameters on immature populations of Ae. aegypti. During a one-year-long field experiment, we monitored 108 macroinvertebrate aquatic communities inhabiting four types of water containers across three different urbanized sites in a Neotropical city. A multimodel inference approach revealed that, in addition to abiotic parameters, biotic interactions with aquatic organisms had an important influence on the abundance of Ae. aegypti and that the urbanized site considered influences the outcomes of the interactions. Controphic species other than mosquitoes aided Ae. aegypti development, suggesting a mechanism of facilitation through a chain of processes. However, the abundance of Ae. aegypti was lowered by competition with native mosquito species in the slightly urbanized area and by predation in more urbanized areas. Competitive displacement and reduction, as well as predation by native aquatic organisms, can be considered a form of ecosystem service. The conservation and/or augmentation of natural enemies should improve the short- and long-term success of incompatible and/or sterile insect techniques, thus opening up perspectives for the future of mosquito management. © 2020, Springer-Verlag GmbH Germany, part of Springer Nature.
Keywords: Biocontrol agents; Competition; Ecosystem services; Mosquito control; Mosquito management; Predation; abiotic factor; biotic factor; competitive displacement; disease vector; maturation; mosquito; pest control; Aedes aegypti; Hexapoda; Zika virus
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Pickett, K. M., Carpenter, J. M., & Dejean, A. (2009). “Basal” but not primitive: the nest of Apoica arborea de Saussure, 1854 (Insecta, Hymenoptera, Vespidae, Polistinae). Zoosystema, 31(4), 945–948.
Abstract: The first nest of Apoica arborea ever collected is reported. Characteristics of the unusual nest design are discussed relative to other members of the genus Apoica and other epiponine genera. The characteristics of its nest architecture are a mosaic of primitive and derived features for the Polistinae, and thus the nest design is not properly interpreted as the primitive condition from which other swarm-founding wasp nest designs are derived. The frequent conflation of “basal” and primitive is discussed.
Keywords: Insecta; Hymenoptera; Vespidae; Polistinae; Apoica; social wasps; nest architecture; mosaic evolution
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Haettenschwiler, S., Coq, S., Barantal, S., & Handa, I. T. (2011). Leaf traits and decomposition in tropical rainforests: revisiting some commonly held views and towards a new hypothesis. New Phytol., 189(4), 950–965.
Abstract: Proper estimates of decomposition are essential for tropical forests, given their key role in the global carbon (C) cycle. However, the current paradigm for litter decomposition is insufficient to account for recent observations and may limit model predictions for highly diverse tropical ecosystems. In light of recent findings from a nutrient-poor Amazonian rainforest, we revisit the commonly held views that: litter traits are a mere legacy of live leaf traits; nitrogen (N) and lignin are the key litter traits controlling decomposition; and favourable climatic conditions result in rapid decomposition in tropical forests. Substantial interspecific variation in litter phosphorus (P) was found to be unrelated to variation in green leaves. Litter nutrients explained no variation in decomposition, which instead was controlled primarily by nonlignin litter C compounds at low concentrations with important soil fauna effects. Despite near-optimal climatic conditions, tropical litter decomposition proceeded more slowly than in a climatically less favourable temperate forest. We suggest that slow decomposition in the studied rainforest results from a syndrome of poor litter C quality beyond a simple lignin control, enforcing energy starvation of decomposers. We hypothesize that the litter trait syndrome in nutrient-poor tropical rainforests may have evolved to increase plant access to limiting nutrients via mycorrhizal associations.
Keywords: energy starvation; French Guiana; litter quality; mycorrhizas; nutrient cycling; nutrient limitation; phosphorus; soil fauna
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Barraza, F., Schreck, E., Lévêque, T., Uzu, G., Lopez, F., Ruales, J., et al. (2017). Cadmium bioaccumulation and gastric bioaccessibility in cacao: A field study in areas impacted by oil activities in Ecuador. Environmental Pollution, 229, 950–963.
Abstract: Cacao from South America is especially used to produce premium quality chocolate. Although the European Food Safety Authority has not established a limit for cadmium (Cd) in chocolate raw material, recent studies demonstrate that Cd concentrations in cacao beans can reach levels higher than the legal limits for dark chocolate (0.8 mg kg−1, effective January 1st, 2019). Despite the fact that the presence of Cd in agricultural soils is related to contamination by fertilizers, other potential sources must be considered in Ecuador. This field study was conducted to investigate Cd content in soils and cacao cultivated on Ecuadorian farms in areas impacted by oil activities. Soils, cacao leaves, and pod husks were collected from 31 farms in the northern Amazon and Pacific coastal regions exposed to oil production and refining and compared to two control areas. Human gastric bioaccessibility was determined in raw cacao beans and cacao liquor samples in order to assess potential health risks involved. Our results show that topsoils (0–20 cm) have higher Cd concentrations than deeper layers, exceeding the Ecuadorian legislation limit in 39% of the sampling sites. Cacao leaves accumulate more Cd than pod husks or beans but, nevertheless, 50% of the sampled beans have Cd contents above 0.8 mg kg−1. Root-to-cacao transfer seems to be the main pathway of Cd uptake, which is not only regulated by physico-chemical soil properties but also agricultural practices. Additionally, natural Cd enrichment by volcanic inputs must not be neglected. Finally, Cd in cacao trees cannot be considered as a tracer of oil activities. Assuming that total Cd content and its bioaccessible fraction (up to 90%) in cacao beans and liquor is directly linked to those in chocolate, the health risk associated with Cd exposure varies from low to moderate.
Keywords: Cacao; Cadmium; Ecuador; Health risk assessment; Uptake and bioaccumulation
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Cereghino, R., Leroy, C., Carrias, J. F., Pelozuelo, L., Segura, C., Bosc, C., et al. (2011). Ant-plant mutualisms promote functional diversity in phytotelm communities. Funct. Ecol., 25(5), 954–963.
Abstract: 1. Our understanding of the contribution of interspecific interactions to functional diversity in nature lags behind our knowledge of spatial and temporal patterns. Although two-species mutualisms are found in all types of ecosystems, the study of their ecological influences on other community members has mostly been limited to third species, while their influence on entire communities remains largely unexplored. 2. We hypothesized that mutualistic interactions between two respective ant species and an epiphyte mediate the biological traits composition of entire invertebrate communities that use the same host plant, thereby affecting food webs and functional diversity at the community level. 3. Aechmea mertensii (Bromeliaceae) is both a phytotelm ('plant-held water') and an ant-garden epiphyte. We sampled 111 bromeliads (111 aquatic invertebrate communities) associated with either the ant Pachycondyla goeldii or Camponotus femoratus. The relationships between ants, bromeliads and invertebrate abundance data were examined using a redundancy analysis. Biological traits information for invertebrates was structured using a fuzzy-coding technique, and a co-inertia analysis between traits and abundance data was used to interpret functional differences in bromeliad ecosystems. 4. The vegetative traits of A. mertensii depended on seed dispersion by C. femoratus and P. goeldii along a gradient of local conditions. The ant partner selected sets of invertebrates with traits that were best adapted to the bromeliads' morphology, and so the composition of the biological traits of invertebrate phytotelm communities depends on the identity of the ant partner. Biological traits suggest a bottom-up control of community structure in C. femoratus-associated phytotelmata and a greater structuring role for predatory invertebrates in P. goeldii-associated plants. 5. This study presents new information showing that two-species mutualisms affect the functional diversity of a much wider range of organisms. Most biological systems form complex networks where nodes (e. g. species) are more or less closely linked to each other, either directly or indirectly, through intermediate nodes. Our observations provide community-level information about biological interactions and functional diversity, and perspectives for further observations intended to examine whether large-scale changes in interacting species/community structure over broad geographical and anthropogenic gradients affect ecosystem functions.
Keywords: ant gardens; biodiversity; bromeliads; community functions; forest; French Guiana; invertebrates; phytotelmata; two-species mutualism
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Marti, G., Eparvier, V., Moretti, C., Prado, S., Grellier, P., Hue, N., et al. (2010). Antiplasmodial benzophenone derivatives from the root barks of Symphonia globulifera (Clusiaceae). Phytochemistry, 71(8-9), 964–974.
Abstract: In an effort to find antimalarial drugs, a systematic in vitro evaluation on a chloroquine-resistant strain of Plasmodium falciparum (FcB1) was undertaken on sixty plant extracts collected in French Guiana. The ethyl acetate extract obtained from the root barks of Symphonia globulifera exhibited a strong antiplasmodial activity (97% at 10 μg/ml). The phytochemical investigation of this extract led to the isolation of nine polycyclic polyprenylated acylphloroglucinol (PPAPs) compounds and two oxidized derivatives. All compounds showed antiplasmodial activity with IC(50)s ranged from 2.1 to 10.1 μM. A LC/ESI-MSn study performed on polyprenylated benzophenones previously isolated from Moronobea coccinea provided a reliable method for their detection in the extract and structural elucidation. (C) 2010 Elsevier Ltd. All rights reserved.
Keywords: Symphonia globulifera; Clusiaceae; Benzophenone; Symphonone; Antiplasmodial; LC/ESI-MS
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Feldpausch, T. R., Phillips, O. L., Brienen, R. J. W., Gloor, E., Lloyd, J., Lopez-Gonzalez, G., et al. (2016). Amazon forest response to repeated droughts. Global Biogeochemical Cycles, 30(7), 964–982.
Abstract: The Amazon Basin has experienced more variable climate over the last decade, with a severe and widespread drought in 2005 causing large basin-wide losses of biomass. A drought of similar climatological magnitude occurred again in 2010; however, there has been no basin-wide ground-based evaluation of effects on vegetation. We examine to what extent the 2010 drought affected forest dynamics using ground-based observations of mortality and growth from an extensive forest plot network. We find that during the 2010 drought interval, forests did not gain biomass (net change: −0.43 Mg ha−1, confidence interval (CI): −1.11, 0.19, n = 97), regardless of whether forests experienced precipitation deficit anomalies. This contrasted with a long-term biomass sink during the baseline pre-2010 drought period (1998 to pre-2010) of 1.33 Mg ha−1 yr−1 (CI: 0.90, 1.74, p < 0.01). The resulting net impact of the 2010 drought (i.e., reversal of the baseline net sink) was −1.95 Mg ha−1 yr−1 (CI:−2.77, −1.18; p < 0.001). This net biomass impact was driven by an increase in biomass mortality (1.45 Mg ha−1 yr−1 CI: 0.66, 2.25, p < 0.001) and a decline in biomass productivity (−0.50 Mg ha−1 yr−1, CI:−0.78, −0.31; p < 0.001). Surprisingly, the magnitude of the losses through tree mortality was unrelated to estimated local precipitation anomalies and was independent of estimated local pre-2010 drought history. Thus, there was no evidence that pre-2010 droughts compounded the effects of the 2010 drought. We detected a systematic basin-wide impact of the 2010 drought on tree growth rates across Amazonia, which was related to the strength of the moisture deficit. This impact differed from the drought event in 2005 which did not affect productivity. Based on these ground data, live biomass in trees and corresponding estimates of live biomass in lianas and roots, we estimate that intact forests in Amazonia were carbon neutral in 2010 (−0.07 Pg C yr−1 CI:−0.42, 0.23), consistent with results from an independent analysis of airborne estimates of land-atmospheric fluxes during 2010. Relative to the long-term mean, the 2010 drought resulted in a reduction in biomass carbon uptake of 1.1 Pg C, compared to 1.6 Pg C for the 2005 event. ©2016. American Geophysical Union. All Rights Reserved.
Keywords: carbon; forest productivity; precipitation; tree mortality; vegetation dynamics; water deficit
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Malé, P. - J. G., Bardon, L., Besnard, G., Coissac, E., Delsuc, F., Engel, J., et al. (2014). Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family. Mol. Ecol. Resour., 14(5), 966–975.
Abstract: Whole genome sequencing is helping generate robust phylogenetic hypotheses for a range of taxonomic groups that were previously recalcitrant to classical molecular phylogenetic approaches. As a case study, we performed a shallow shotgun sequencing of eight species in the tropical tree family Chrysobalanaceae to retrieve large fragments of high-copy number DNA regions and test the potential of these regions for phylogeny reconstruction. We were able to assemble the nuclear ribosomal cluster (nrDNA), the complete plastid genome (ptDNA) and a large fraction of the mitochondrial genome (mtDNA) with approximately 1000×, 450× and 120× sequencing depth respectively. The phylogenetic tree obtained with ptDNA resolved five of the seven internal nodes. In contrast, the tree obtained with mtDNA and nrDNA data were largely unresolved. This study demonstrates that genome skimming is a cost-effective approach and shows potential in plant molecular systematics within Chrysobalanaceae and other under-studied groups. © 2014 John Wiley & Sons Ltd.
Keywords: Next-generation sequencing; Organellar genome; Phylogenomics; Tropical trees
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Morel, H., Mangenet, T., Beauchene, J., Ruelle, J., Nicolini, E., Heuret, P., et al. (2015). Seasonal variations in phenological traits: leaf shedding and cambial activity in Parkia nitida Miq. and Parkia velutina Benoist (Fabaceae) in tropical rainforest. Trees – Structure and Function, 29(4), 973–984.
Abstract: Key message: In French Guiana, the leaf and cambium phenologies should not be considered only as exogenous-driven processes, as the dry season, but also as endogenous-driven, as tree development stage. Abstract: Studies of the periodicity of wood formation provide essential data on tree age and on factors that control tree growth. The aim of this work was to investigate cambial phenology and its relation with leaf phenology and climatic seasonality in two briefly deciduous tropical rainforest species belonging to the genus Parkia. Wood microcores were collected every 15 days from April 2009 to February 2012 from five trees of each species. The microcores were stained with cresyl violet acetate to facilitate counting the number of cells in the cambial zone, in the radial enlargement zone and wall-thickening zone. At the same time, we observed leaf shedding pattern in the crown of the same trees. In both species, cambial activity was significantly reduced during the leafless period. In P. nitida, these two concomitant events were observed during the dry season whereas in P. velutina they can occur anytime in the year with no apparent link with seasonality. In conclusion, the period of reduced cambial activity in some tropical rainforest trees may be independent of rainfall seasonality and not necessarily follow an annual cycle. It appears that leaf phenology is a good proxy to estimate cambial activity. © 2015, Springer-Verlag Berlin Heidelberg.
Keywords: Cambial activity; Climate; French Guiana; Leaf shedding pattern; Tropical rainforest
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