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Author Goulamoussene, Y.; Bedeau, C.; Descroix, L.; Linguet, L.; Herault, B.
Title Environmental control of natural gap size distribution in tropical forests Type Journal Article
Year 2017 Publication Biogeosciences Abbreviated Journal Biogeosciences
Volume 14 Issue 2 Pages 353-364
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Abstract Natural disturbances are the dominant form of forest regeneration and dynamics in unmanaged tropical forests. Monitoring the size distribution of treefall gaps is important to better understand and predict the carbon budget in response to land use and other global changes. In this study, we model the size frequency distribution of natural canopy gaps with a discrete power law distribution. We use a Bayesian framework to introduce and test, using Monte Carlo Markov chain and Kuo-Mallick algorithms, the effect of local physical environment on gap size distribution. We apply our methodological framework to an original light detecting and ranging dataset in which natural forest gaps were delineated over 30 000 ha of unmanaged forest. We highlight strong links between gap size distribution and environment, primarily hydrological conditions and topography, with large gaps being more frequent on floodplains and in wind-exposed areas. In the future, we plan to apply our methodological framework on a larger scale using satellite data. Additionally, although gap size distribution variation is clearly under environmental control, variation in gap size distribution in time should be tested against climate variability. © Author(s) 2017.
Address Cirad, UMR EcoFoG, AgroParisTech, CNRS, Inra, Univ Antilles, Univ Guyane, Kourou, French Guiana
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Notes Export Date: 7 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 729
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Author Lamarre, G.P.A.; Decaëns, T.; Rougerie, R.; Barbut, J.; Dewaard, J.R.; Hebert, P.D.N.; Herbin, D.; Laguerre, M.; Thiaucourt, P.; Bonifacio Martins, M.
Title An integrative taxonomy approach unveils unknown and threatened moth species in Amazonian rainforest fragments Type Journal Article
Year 2016 Publication Insect Conservation and Diversity Abbreviated Journal Insect Conserv Divers
Volume 9 Issue 5 Pages 475-479
Keywords Amazonian forest; Belém center of endemism; centinelan extinction; conservation; DNA barcoding; Lepidoptera; species discovery
Abstract This study focuses on the importance in hyperdiverse regions, such as the Amazonian forest, of accelerating and optimising the census of invertebrate communities.
We carried out low-intensity sampling of tropical moth (Lepidoptera) assemblages in disturbed forest fragments in Brazil.
We combined DNA barcoding and taxonomists’ expertise to produce fast and accurate surveys of local diversity, including the recognition and census of undescribed and endemic species.
Integrating expert knowledge of species distributions, we show that despite limited sampling effort, our approach revealed an unexpectedly high number of new and endemic species in severely threatened tropical forest fragments.
These results highlight the risk of silent centinelan extinctions and emphasise the urgent need for accelerated invertebrate surveys in high-endemism and human-impacted tropical forests.
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Call Number (down) EcoFoG @ webmaster @ Serial 730
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Author Lamarre, G.P.A.; Herault, B.; Fine, P.V.A.; Vedel, V.; Lupoli, R.; Mesones, I.; Baraloto, C.
Title Taxonomic and functional composition of arthropod assemblages across contrasting Amazonian forests Type Journal Article
Year 2016 Publication Journal of Animal Ecology Abbreviated Journal Journal of Animal Ecology
Volume 85 Issue 1 Pages 227-239
Keywords Amazon; Arthropod community; Environmental filtering; Forest habitat; French Guiana; Functional composition; Mass sampling; Peru; Trophic cascades
Abstract Arthropods represent most of global biodiversity, with the highest diversity found in tropical rain forests. Nevertheless, we have a very incomplete understanding of how tropical arthropod communities are assembled. We conducted a comprehensive mass sampling of arthropod communities within three major habitat types of lowland Amazonian rain forest, including terra firme clay, white-sand and seasonally flooded forests in Peru and French Guiana. We examined how taxonomic and functional composition (at the family level) differed across these habitat types in the two regions. The overall arthropod community composition exhibited strong turnover among habitats and between regions. In particular, seasonally flooded forest habitats of both regions comprised unique assemblages. Overall, 17·7% (26 of 147) of arthropod families showed significant preferences for a particular habitat type. We present a first reproducible arthropod functional classification among the 147 taxa based on similarity among 21 functional traits describing feeding source, major mouthparts and microhabitats inhabited by each taxon. We identified seven distinct functional groups whose relative abundance contrasted strongly across the three habitats, with sap and leaf feeders showing higher abundances in terra firme clay forest. Our novel arthropod functional classification provides an important complement to link these contrasting patterns of composition to differences in forest functioning across geographical and environmental gradients. This study underlines that both environment and biogeographical processes are responsible for driving arthropod taxonomic composition while environmental filtering is the main driver of the variance in functional composition. © 2016 British Ecological Society.
Address International Center for Tropical Botany, Department of Biological Sciences, International Center for Tropical Botany, Florida International University, Miami, FL, United States
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Notes Cited By :1; Export Date: 17 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 731
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Author Boulogne, I.; Constantino, R.; Amusant, N.; Falkowski, M.; Rodrigues, A.M.S.; Houel, E.
Title Ecology of termites from the genus Nasutitermes (Termitidae: Nasutitermitinae) and potential for science-based development of sustainable pest management programs Type Journal Article
Year 2017 Publication Journal of Pest Science Abbreviated Journal Journal of Pest Science
Volume 90 Issue 1 Pages 19-37
Keywords Antimicrobial and insecticidal botanical extracts; Ipm; Nasutitermes corniger; Sustainable management; Taxonomic history; Termitidae
Abstract The genus Nasutitermes is among the most abundant wood-feeding Termitidae and an extremely diverse and heterogeneous group in terms of its biogeography and morphology. Despite the major role of several Nasutitermes species as structural pests, the phylogenetic status of this genus is still unclear, along with a confused taxonomy and species identification remaining difficult. The first aim of this review was thus to gather and discuss studies concerning the taxonomic status of the genus Nasutitermes in order to clarify this crucial point. Then, our goal was to gain new insights into the management of N. corniger, considered to be the most economically detrimental pest of this genus in South America and a Nasutitermes model species, while filtering available information concerning its biology through the prism of termite control, as well as critically examine the existing methods. We indeed strongly believe that increasing our knowledge of this species’ biological strategies is the key to progress in the challenging question of their sustainable management. © 2016, Springer-Verlag Berlin Heidelberg.
Address Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique, Sorbonne Universités, Université Pierre et Marie Curie, CNRS, Banyuls/Mer, France
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Notes Export Date: 17 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 732
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Author Lehnebach, R.; Morel, H.; Bossu, J.; Le Moguédec, G.; Amusant, N.; Beauchene, J.; Nicolini, E.
Title Heartwood/sapwood profile and the tradeoff between trunk and crown increment in a natural forest: the case study of a tropical tree (Dicorynia guianensis Amsh., Fabaceae) Type Journal Article
Year 2017 Publication Trees – Structure and Function Abbreviated Journal Trees – Structure and Function
Volume 31 Issue 1 Pages 199-214
Keywords Dicorynia guianensis; Growth allocation; Heartwood; Ontogeny; Sapwood; Tropical tree
Abstract Key message: Sapwood area and the radial growth rate of the trunk follow the same pattern at breast height, with an initial increase and subsequent constant value, resulting from the increasing growth allocation toward the crown rather than tree decline. Heartwood area and heartwood volume in the trunk increase more rapidly after this shift occurs. Abstract: Sapwood (SW) and heartwood (HW) are two functionally distinct classifications of wood in perennial stems for which quantities can vary greatly in tropical trees. Numerous positive correlations have been found between the radial growth rate (RGR) and SW quantity; however, variations in the SW/HW quantities have not been studied in light of the ontogenetic variation of RGR. Wood core sampling, intensive measurements of tree structure (number of branches, stem volumes), and radial growth monitoring were performed on an abundant and highly exploited tree species in French Guiana (Dicorynia guianensis) to investigate the relationship between RGR, SW/HW quantity, tree structure, and their variations on the course of a tree’s ontogeny. SW area and RGR followed the same pattern of variation throughout tree development, both increasing first and reaching a steady state after 50 cm DBH (diameter at breast height). After this value, we observed a strong increase in both the HW area and HW volume increment, concomitant with a more rapid increase in crown volume. The stabilization of RGR for trees with DBH > 50 cm was related not to a tree’s decline but rather to an increasing wood allocation to the crown, confirming that RGR at breast height is a poor indicator of whole-tree growth for bigger individuals. We also confirmed that HW formation is an ontogenetic process managing SW quantity that is continuously and increasingly produced within the crown as the tree grows. This study highlights the effect of growth-mediated ontogenetic changes on the localization of water and carbohydrate storage within a tree, resulting from SW and HW dynamics throughout tree ontogeny. © 2016, Springer-Verlag Berlin Heidelberg.
Address CIRAD, UMR EcoFoG, BP701, Kourou Cedex, French Guiana
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Notes Export Date: 19 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 733
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Author Schimann, H.; Bach, C.; Lengelle, J.; Louisanna, E.; Barantal, S.; Murat, C.; Buée, M.
Title Diversity and Structure of Fungal Communities in Neotropical Rainforest Soils: The Effect of Host Recurrence Type Journal Article
Year 2017 Publication Microbial Ecology Abbreviated Journal Microbial Ecology
Volume 73 Issue 2 Pages 310-320
Keywords Amazonian forest; Fungal communities; Host recurrence; Litter; Second-generation sequencing; Soil
Abstract The patterns of the distribution of fungal species and their potential interactions with trees remain understudied in Neotropical rainforests, which harbor more than 16,000 tree species, mostly dominated by endomycorrhizal trees. Our hypothesis was that tree species shape the non-mycorrhizal fungal assemblages in soil and litter and that the diversity of fungal communities in these two compartments is partly dependent on the coverage of trees in the Neotropical rainforest. In French Guiana, a long-term plantation and a natural forest were selected to test this hypothesis. Fungal ITS1 regions were sequenced from soil and litter samples from within the vicinity of tree species. A broad range of fungal taxa was found, with 42 orders and 14 classes. Significant spatial heterogeneity in the fungal communities was found without strong variation in the species richness and evenness among the tree plots. However, tree species shaped the fungal assemblages in the soil and litter, explaining up to 18 % of the variation among the communities in the natural forest. These results demonstrate that vegetation cover has an important effect on the structure of fungal assemblages inhabiting the soil and litter in Amazonian forests, illustrating the relative impact of deterministic processes on fungal community structures in these highly diverse ecosystems. © 2016, Springer Science+Business Media New York.
Address Equipe Environnement et Microbiologie, Institut Pluridisciplinaire de Recherche en Environnement et Matériaux, Université de Pau et Pays de l’Adour, Pau, France
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Notes Export Date: 19 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 734
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Author Phillips, O.L.; Brienen, R.J.W.; Gloor, E.; Baker, T.R.; Lloyd, J.; Lopez-Gonzalez, G.; Monteagudo-Mendoza, A.; Malhi, Y.; Lewis, S.L.; Vásquez Martinez, R.; Alexiades, M.; Álvarez Dávila, E.; Alvarez-Loayza, P.; Andrade, A.; Aragão, L.E.O.C.; Araujo-Murakami, A.; Arets, E.J.M.M.; Arroyo, L.; Aymard, G.A.; Bánki, O.S.; Baraloto, C.; Barroso, J.; Bonal, D.; Boot, R.G.A.; Camargo, J.L.C.; Castilho, C.V.; Chama, V.; Chao, K.J.; Chave, J.; Comiskey, J.A.; Valverde, F.C.; da Costa, L.; de Oliveira, E.A.; Di Fiore, A.; Erwin, T.L.; Fauset, S.; Forsthofer, M.; Galbraith, D.R.; Grahame, E.S.; Groot, N.; Herault, B.; Higuchi, N.; Honorio Coronado, E.N.; Keeling, H.; Killeen, T.J.; Laurance, W.F.; Laurance, S.; Licona, J.; Magnusson, W.E.; Marimon, B.S.; Marimon-Junior, B.H.; Mendoza, C.; Neill, D.A.; Nogueira, E.M.; Núñez, P.; Pallqui Camacho, N.C.; Parada, A.; Pardo-Molina, G.; Peacock, J.; Peña-Claros, M.; Pickavance, G.C.; Pitman, N.C.A.; Poorter, L.; Prieto, A.; Quesada, C.A.; Ramírez, F.; Ramírez-Angulo, H.; Restrepo, Z.; Roopsind, A.; Rudas, A.; Salomão, R.P.; Schwarz, M.; Silva, N.; Silva-Espejo, J.E.; Silveira, M.; Stropp, J.; Talbot, J.; ter Steege, H.; Teran-Aguilar, J.; Terborgh, J.; Thomas-Caesar, R.; Toledo, M.; Torello-Raventos, M.; Umetsu, R.; van der Heijden, G.M.F.; van der Hout, P.; Guimarães Vieira, I.C.; Vieira, S.A.; Vilanova, E.; Vos, V.A.; Zagt, R.J.; Alarcon, A.; Amaral, I.; Camargo, P.B.; Brown, I.F.; Blanc, L.; Burban, B.; Cardozo, N.; Engel, J.; de Freitas, M.A.; de Oliveira, A.; Fredericksen, T.S.; Ferreira, L.; Hinojosa, N.T.; Jimenez, E.; Lenza, E.; Mendoza, C.; Mendoza Polo, I.; Peña Cruz, A.; Peñuela, M.C.; Petronelli, P.; Singh, J.; Maquirino, P.; Serano, J.; Sota, A.; Oliveira dos Santos, C.; Ybarnegaray, J.; Ricardo, J.
Title Carbon uptake by mature Amazon forests has mitigated Amazon nations' carbon emissions Type Journal Article
Year 2017 Publication Carbon Balance and Management Abbreviated Journal Carbon Balance and Management
Volume 12 Issue 1 Pages
Keywords Amazonia; Carbon balance; Carbon sink; Climate change; Ecosystem service; Land use change; Sequestration; Tropical forests
Abstract Background: Several independent lines of evidence suggest that Amazon forests have provided a significant carbon sink service, and also that the Amazon carbon sink in intact, mature forests may now be threatened as a result of different processes. There has however been no work done to quantify non-land-use-change forest carbon fluxes on a national basis within Amazonia, or to place these national fluxes and their possible changes in the context of the major anthropogenic carbon fluxes in the region. Here we present a first attempt to interpret results from ground-based monitoring of mature forest carbon fluxes in a biogeographically, politically, and temporally differentiated way. Specifically, using results from a large long-term network of forest plots, we estimate the Amazon biomass carbon balance over the last three decades for the different regions and nine nations of Amazonia, and evaluate the magnitude and trajectory of these differentiated balances in relation to major national anthropogenic carbon emissions. Results: The sink of carbon into mature forests has been remarkably geographically ubiquitous across Amazonia, being substantial and persistent in each of the five biogeographic regions within Amazonia. Between 1980 and 2010, it has more than mitigated the fossil fuel emissions of every single national economy, except that of Venezuela. For most nations (Bolivia, Colombia, Ecuador, French Guiana, Guyana, Peru, Suriname) the sink has probably additionally mitigated all anthropogenic carbon emissions due to Amazon deforestation and other land use change. While the sink has weakened in some regions since 2000, our analysis suggests that Amazon nations which are able to conserve large areas of natural and semi-natural landscape still contribute globally-significant carbon sequestration. Conclusions: Mature forests across all of Amazonia have contributed significantly to mitigating climate change for decades. Yet Amazon nations have not directly benefited from providing this global scale ecosystem service. We suggest that better monitoring and reporting of the carbon fluxes within mature forests, and understanding the drivers of changes in their balance, must become national, as well as international, priorities. © 2017 The Author(s).
Address University of Leeds, School of Geography, Leeds, United Kingdom
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Notes Export Date: 20 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 735
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Author Duval, R.; Duplais, C.
Title Fluorescent natural products as probes and tracers in biology Type Journal Article
Year 2017 Publication Natural Product Reports Abbreviated Journal Natural Product Reports
Volume 34 Issue 2 Pages 161-193
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Abstract Covering: 1985 up to the end of 2016 Fluorescence is a remarkable property of many natural products in addition to their medicinal and biological values. Herein, we provide a review on these peculiar secondary metabolites to stimulate prospecting of them as original fluorescent tracers, endowed with unique photophysical properties and with applications in most fields of biology. The compounds are spectrally categorized (i.e. fluorescing from violet to the near infra-red) and further structurally classified within each category. Natural products selected for their high impact in modern fluorescence-based biological studies are highlighted throughout the article. Finally, we discuss aspects of chemical ecology where fluorescent natural products might have key evolutionary roles and thus open new research directions in the field. © 2017 The Royal Society of Chemistry.
Address CNRS, UMR 8172 EcoFoG (Ecologie des Forêts de Guyane), AgroParisTech, Cirad, INRA, Université des Antilles, Université de Guyane, 23 avenue Pasteur, Cayenne, France
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Notes Export Date: 23 February 2017 Approved no
Call Number (down) EcoFoG @ webmaster @ Serial 736
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Author Odonne, G.; Houel, E.; Bourdy, G.; Stien, D.
Title Treating leishmaniasis in Amazonia: A review of ethnomedicinal concepts and pharmaco-chemical analysis of traditional treatments to inspire modern phytotherapies Type Journal Article
Year 2017 Publication Journal of Ethnopharmacology Abbreviated Journal Journal of Ethnopharmacology
Volume 199 Issue Pages 211-230
Keywords Amazonia; Distribution indexes; Ethnomedecine; Interculturality; Leishmaniasis; Medicinal plants; Traditional medicine
Abstract Ethnopharmacological relevance Cutaneous and mucocutaneous leishmaniasis are neglected tropical diseases that occur in all intertropical regions of the world. Amazonian populations have developed an abundant knowledge of the disease and its remedies. Therefore, we undertook to review traditional antileishmanial plants in Amazonia and have developed new tools to analyze this somewhat dispersed information. Material and methods A literature review of traditional remedies for cutaneous/mucocutaneous leishmaniasis in the Amazon was conducted and the data obtained was used to calculate distribution indexes designed to highlight the most relevant uses in Amazonia. The cultural distribution index represents the distribution rate of a given taxon among different cultural groups and was calculated as the ratio of the number of groups using the taxon to the total number of groups cited. The geographical distribution index allowed us to quantify spatial distribution of a taxon's uses in Amazonia and was calculated geometrically by measuring the average distance between the points where uses have been reported and the barycenter of those points. The general distribution index was defined as an arithmetic combination of the previous two and provides information on both cultural and spatial criteria. Results 475 use reports, concerning 291 botanical species belonging to 83 families have been gathered depicted from 29 sources. Uses concern 34 cultural groups. While the use of some taxa appears to be Pan-Amazonian, some others are clearly restricted to small geographical regions. Particular attention has been paid to the recipes and beliefs surrounding treatments. Topical application of the remedies dominated the other means of administration and this deserves particular attention as the main treatments against Neotropical leishmaniasis are painful systemic injections. The data set was analyzed using the previously defined distribution indexes and the most relevant taxa were further discussed from a phytochemical and pharmacological point of view. Conclusions The Amazonian biodiversity and cultural heritage host a fantastic amount of data whose systematic investigation should allow a better large-scale understanding of the dynamics of traditional therapies and the consequent discovery of therapeutic solutions for neglected diseases. Distribution indices are indeed powerful tools for emphasizing the most relevant treatments against a given disease and should be very useful in the meta-analysis of other regional pharmacopeia. This focus on renowned remedies that have not yet benefitted from extended laboratory studies, could stimulate future research on new treatments of natural origin for leishmaniasis. © 2017 Elsevier Ireland Ltd
Address Sorbonne Universités, UPMC Univ Paris 06, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique, Banyuls-sur-Mer, France
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Author Dezecache, Camille; Faure, Emmanuel; Gond, Valéry; Salles, Jean-Michel; Vieilledent, Ghislain; Herault, Bruno
Title Gold-rush in a forested El Dorado: deforestation leakages and the need for regional cooperation Type Journal Article
Year 2017 Publication Environmental Research Letters Abbreviated Journal
Volume 12 Issue 3 Pages 034013
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Abstract Tropical forests of the Guiana Shield are the most affected by gold-mining in South America, experiencing an exponential increase in deforestation since the early 2000’s. Using yearly deforestation data encompassing Guyana, Suriname, French Guiana and the Brazilian State of Amapá, we demonstrated a strong relationship between deforestation due to gold-mining and gold-prices at the regional scale. In order to assess additional drivers of deforestation due to gold-mining, we focused on the national scale and highlighted the heterogeneity of the response to gold-prices under different political contexts. Deforestation due to gold-mining over the Guiana Shield occurs mainly in Guyana and Suriname. On the contrary, past and current repressive policies in Amapá and French Guiana likely contribute to the decorrelation of deforestation and gold prices. In this work, we finally present a case study focusing on French Guiana and Suriname, two neighbouring countries with very different levels of law enforcement against illegal gold-mining. We developed a modelling framework to estimate potential deforestation leakages from French Guiana to Suriname in the border areas. Based on our assumptions, we estimated a decrease in deforestation due to gold-mining of approx. 4300 hectares in French Guiana and an increase of approx. 12 100 hectares in Suriname in response to the active military repression of illegal gold-mining launched in French Guiana. Gold-mining in the Guiana Shield provides challenging questions regarding REDD+ implementation. These questions are discussed at the end of this study and are important to policy makers who need to provide sustainable alternative employment to local populations in order to ensure the effectiveness of environmental policies.
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