| Records |
Author  |
Henkel, T.W.; Wilson, A.W.; Aime, M.C.; Dierks, J.; Uehling, J.K.; Roy, M.; Schimann, H.; Wartchow, F.; Mueller, G.M. |
| Title |
Cantharellaceae of Guyana II: New species of Craterellus, new South American distribution records for Cantharellus guyanensis and Craterellus excelsus, and a key to the Neotropical taxa |
Type |
Journal Article |
| Year |
2014 |
Publication |
Mycologia |
Abbreviated Journal |
Mycologia |
| Volume |
106 |
Issue |
2 |
Pages |
307-324 |
| Keywords |
Cantharellales; Coccoloba; Dicymbe; Ectomycorrhizae; Guiana shield; Tropical fungi |
| Abstract |
Craterellus olivaceoluteus sp. nov. and Craterellus cinereofimbriatus sp. nov. are described as new to science. These fungi were collected from Guyana in association with ectomycorrhizal host trees in the genera Dicymbe (Fabaceae subfam. Caesalpinioideae) and Pakaraimaea (Dipterocarpaceae). Cantharellus guyanensis Mont., originally described from French Guiana, is redescribed from recent collections from Guyana, with additional range extensions for the species provided based on material examined from French Guiana, Venezuela, and north central, northeastern and southern Brazil, circumscribing nearly the entire Guiana Shield region and beyond. A new distribution record from French Guiana is provided for Craterellus excelsus T.W. Henkel & Aime. Macromorphological, micromorphological and habitat data are provided for the new species and C. guyanensis as well as DNA sequence data from the nuclear ribosomal regions of the internal transcribed spacer (ITS) and 28S large subunit (LSU); additional sequence data is provided for C. guyanensis and C. excelsus specimens collected outside Guyana. The relationships of these taxa within the Cantharellaceae were evaluated with phylogenetic analyses of ITS and LSU sequence data. This work brings the total number of Cantharellaceae species known from Guyana to eight. A key to the Cantharellus and Craterellus species known from the lowland Neotropics and extralimital montane Central and South America is provided. © 2014 by The Mycological Society of America. |
| Address |
Department of Biological Sciences, Boise State University, Boise, ID, 83725, United States |
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Allen Press Inc. |
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15572536 (Issn) |
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Export Date: 10 June 2014; Coden: Mycoa; Correspondence Address: Henkel, T.W.; Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, United States; email: twh5@humboldt.edu; Funding Details: DEB-0732968, NSF, National Science Foundation |
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EcoFoG @ webmaster @ |
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546 |
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| Author |
Herault, B. |
| Title |
Reconciling niche and neutrality through the Emergent Group approach |
Type |
Journal Article |
| Year |
2007 |
Publication |
Perspectives in Plant Ecology Evolution and Systematics |
Abbreviated Journal |
Perspect. Plant Ecol. Evol. Syst. |
| Volume |
9 |
Issue |
2 |
Pages |
71-78 |
| Keywords |
Biodiversity; ecological equivalency; biological traits; neutral theory; niche differentiation; redundancy |
| Abstract |
Both niche and neutral theories have been suggested as potential frameworks for modelling biodiversity. Niche models assume that biological traits represent evolutionary adaptations and define individuals in terms of functional trade-offs. Neutral models assume that all individuals at a single trophic level are functionally equivalent on a per capita basis with respect to their birth, death, dispersal and speciation. The opinion of many researchers is that neutral and niche processes operate simultaneously to generate diversity without knowing how the unification of both models can be achieved. Recently, several theoretical papers have reported evidence on the evolutionary emergence of niche structures shaping the emergence of groups of similar species. In this way, an Emergent Group is defined as a set of species that have a similar functional niche owing to a convergent ecological strategy. Central to the Emergent Group concept are the assumptions of functional equivalence within and of functional divergence between Emergent Groups. Within an Emergent Group, species richness is subject to a zero-sum rule set by the balance between the rate of individual loss and of immigration. Between Emergent Groups, tradeoffs such as seed size/seedling competitivity, investment in reproductive system/investment in vegetative systems or competitive ability/predator invulnerability are cornerstones of the evolutionary divergence. Delineating Emergent Groups amounts to reaching a compromise between maximizing niche differentiation (i.e. maximizing differences in functional tradeoffs) between Emergent Groups and maximizing neutrality within Emergent Groups. Up to now, the Emergent Group concept has been mostly proposed by theoretical scientists but it should be tested by empirical ecologists. The way in which niche and neutral models could be combined provides a profitable opportunity for theoretical and empirical scientists to collaborate fruitfully. (c) 2007 Rubel Foundation, ETH Zurich. Published by Elsevier GmbH. All rights reserved. |
| Address |
[Herault, Bruno] Univ Antilles Guyane, UMR Ecol Forets Guyane, F-97379 Kourou, France, Email: Bruno.Herault@cirad.fr |
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ELSEVIER GMBH, URBAN & FISCHER VERLAG |
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1433-8319 |
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ISI:000251685100002 |
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no |
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EcoFoG @ eric.marcon @ |
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147 |
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| Author |
Herault, B.; Bachelot, B.; Poorter, L.; Rossi, V.; Bongers, F.; Chave, J.; Paine, C.E.T.; Wagner, F.; Baraloto, C. |
| Title |
Functional traits shape ontogenetic growth trajectories of rain forest tree species |
Type |
Journal Article |
| Year |
2011 |
Publication |
Journal of Ecology |
Abbreviated Journal |
J. Ecol. |
| Volume |
99 |
Issue |
6 |
Pages |
1431-1440 |
| Keywords |
Bayesian modelling; Functional traits; Growth modelling; Leaf economics; Leaf-height-seed strategy; Plant development and life-history traits; Plant strategy; Stem economics; Tropical rain forest |
| Abstract |
1.Functional traits are posited to explain interspecific differences in performance, but these relationships are difficult to describe for long-lived organisms such as trees, which exhibit strong ontogenetic changes in demographic rates. Here, we use a size-dependent model of tree growth to test the extent to which of 17 functional traits related to leaf and stem economics, adult stature and seed size predict the ontogenetic trajectory of tree growth. 2.We used a Bayesian modelling framework to parameterize and contrast three size-dependent diameter growth models using 16years of census data from 5524 individuals of 50 rain forest tree species: a size-dependent model, a size-dependent model with species-specific parameters and a size-dependent model based on functional traits. 3.Most species showed clear hump-shaped ontogenetic growth trajectories and, across species, maximum growth rate varied nearly tenfold, from 0.58 to 5.51mmyear-1. Most species attained their maximum growth at 60% of their maximum size, whereas the magnitude of ontogenetic changes in growth rate varied widely among species. 4.The Trait-Model provided the best compromise between explained variance and model parsimony and needed considerably fewer parameters than the model with species terms. 5.Stem economics and adult stature largely explained interspecific differences in growth strategy. Maximum absolute diameter growth rates increased with increasing adult stature and leaf δ13C and decreased with increasing wood density. Species with light wood had the greatest potential to modulate their growth, resulting in hump-shaped ontogenetic growth curves. Seed size and leaf economics, generally thought to be of paramount importance for plant performance, had no significant relationships with the growth parameters. 6.Synthesis. Our modelling approach offers a promising way to link demographic parameters to their functional determinants and hence to predict growth trajectories in species-rich communities with little parameter inflation, bridging the gap between functional ecology and population demography. © 2011 The Authors. Journal of Ecology © 2011 British Ecological Society. |
| Address |
Department of Biology, University of Florida, Gainesville, FL 32611, United States |
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00220477 (Issn) |
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Export Date: 21 October 2011; Source: Scopus; Coden: Jecoa; doi: 10.1111/j.1365-2745.2011.01883.x; Language of Original Document: English; Correspondence Address: Hérault, B.; Université des Antilles et de la Guyane, UMR Ecologie des Forêts de Guyane, 97387 Kourou Cedex, France; email: bruno.herault@ecofog.gf |
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EcoFoG @ webmaster @ |
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342 |
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Herault, B.; Beauchene, J.; Muller, F.; Wagner, F.; Baraloto, C.; Blanc, L.; Martin, J.M. |
| Title |
Modeling decay rates of dead wood in a neotropical forest |
Type |
Journal Article |
| Year |
2010 |
Publication |
Oecologia |
Abbreviated Journal |
Oecologia |
| Volume |
164 |
Issue |
1 |
Pages |
243-251 |
| Keywords |
Amazonia; Carbon cycle; Decomposition; Selective logging; Rainforest; Coarse woody debris |
| Abstract |
Variation of dead wood decay rates among tropical trees remains one source of uncertainty in global models of the carbon cycle. Taking advantage of a broad forest plot network surveyed for tree mortality over a 23-year period, we measured the remaining fraction of boles from 367 dead trees from 26 neotropical species widely varying in wood density (0.23-1.24 g cm(-3)) and tree circumference at death time (31.5-272.0 cm). We modeled decay rates within a Bayesian framework assuming a first order differential equation to model the decomposition process and tested for the effects of forest management (selective logging vs. unexploited), of mode of death (standing vs. downed) and of topographical levels (bottomlands vs. hillsides vs. hilltops) on wood decay rates. The general decay model predicts the observed remaining fraction of dead wood (R (2) = 60%) with only two biological predictors: tree circumference at death time and wood specific density. Neither selective logging nor local topography had a differential effect on wood decay rates. Including the mode of death into the model revealed that standing dead trees decomposed faster than downed dead trees, but the gain of model accuracy remains rather marginal. Overall, these results suggest that the release of carbon from tropical dead trees to the atmosphere can be simply estimated using tree circumference at death time and wood density. |
| Address |
[Herault, Bruno; Wagner, Fabien; Martin, Jean-Michel] Univ Antilles Guyane, UMR EcoFoG, F-97387 Kourou, France, Email: bruno.herault@ecofog.gf |
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0029-8549 |
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ISI:000280962200023 |
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no |
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EcoFoG @ eric.marcon @ |
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45 |
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| Author |
Herault, B.; Bornet, A.; Tremolieres, M. |
| Title |
Redundancy and niche differentiation among the European invasive Elodea species |
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Journal Article |
| Year |
2008 |
Publication |
Biological Invasions |
Abbreviated Journal |
Biol. Invasions |
| Volume |
10 |
Issue |
7 |
Pages |
1099-1107 |
| Keywords |
biological traits; functional equivalence; invasivness; niche overlapping; waterweeds |
| Abstract |
Community ecologists implicitly assume redundancy when they aggregate species into functional groups. But there have been remarkably few empirical efforts to investigate the accuracy of this concept in situ. The concept of redundancy could be roughly split into two components: the ecological redundancy (similar response to environmental variations involving similar ecological processes) and the functional redundancy (similar biological trait combinations shaping similar functional processes). Both types of redundancy are tested among the 3 invasive European Elodeas. In 11 sites and during two successive years 2004-2005, the cover growth rate of each Elodea species was monthly recorded. To test ecological redundancy, cover growth rates were related to a large suite of environmental variables. To test functional redundancy, 13 biological traits involved in competitive relationships were measured each month. Firstly, the redundancy hypothesis looks problematic for Elodea ernstiae. Indeed, the later possess numerous biological traits involved in light competition and niche overlap with the other Elodeas is very low. Secondly, ecological and functional redundancy can be successfully applied to Elodea canadensis and Elodea nuttallii. They share a large suite of biological traits leading to wide niche overlaps through the growing season. And the measured environmental variables do not differentially influence their growth rates, which are, in turn, controlled by a similar group of biological traits. In this way, the different invasiveness patterns of E. canadensis and E. nuttallii could be solely due to the ecological drift and their ecological dynamic could follow neutral rules. |
| Address |
[Herault, Bruno] Univ Antilles Guyane, INRA, UMR Ecol Forets Guyane, F-97379 Kourou, France, Email: Bruno.Herault@cirad.fr |
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1387-3547 |
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ISI:000258704400015 |
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no |
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EcoFoG @ eric.marcon @ |
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131 |
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| Author |
Herault, B.; Honnay, O. |
| Title |
Using life-history traits to achieve a functional classification of habitats |
Type |
Journal Article |
| Year |
2007 |
Publication |
Applied Vegetation Science |
Abbreviated Journal |
Appl. Veg. Sci. |
| Volume |
10 |
Issue |
1 |
Pages |
73-80 |
| Keywords |
forest connectivity; functional group; habitat typology; land-use history; riverine forest; species functional unity |
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Question: To establish a habitat classification based on functional group co-occurrence that may help the drawing up of conservation plans. Location: Riverine forest fragments in the Grand-duche de Luxembourg, Europe. Methods: Forest fragments were surveyed for their abundance of vascular plants. These were clustered into emergent groups according to 14 life-traits related to plant dispersal, establishment and persistence. Forest fragments were classified according to similar distribution of the identified emergent groups. Environmental factors were related to the emergent group richness in each forest type using generalized linear models. Results: Contrary to former species centred classifications, only two groups of forests, each with clearly different emergent group composition and conservation requirements, were detected: (1) swamp forests characterized by anemogamous perennials, annuals and hydrochorous perennials and (2) moist forests characterized by barochorous perennials, small geophytes and zoochorous phanerophytes. From a conservation point of view, priority should be given to large swamp forest with intact flooding regimes. This is in accordance with the high wind and water dispersal capacities of their typical emergent groups. For the moist forests, conservation priorities should be high forest connectivity and historical continuity since dispersal and establishment of their characteristic emergent groups are highly limited. Conclusions: The described methodology, situated at an intermediate integration level between the individual species and whole community descriptors, takes advantage of both conservation plans built for single species and the synthetic power of broad ecological measures. |
| Address |
Univ Liege, Dept Environm Sci & Management, B-6700 Arlon, Belgium, Email: bruno.herault@cirad.fr |
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OPULUS PRESS UPPSALA AB |
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1402-2001 |
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ISI:000245934700009 |
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no |
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EcoFoG @ eric.marcon @ |
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218 |
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| Author |
Herault, B.; Ouallet, J.; Blanc, L.; Wagner, F.; Baraloto, C. |
| Title |
Growth responses of neotropical trees to logging gaps |
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Journal Article |
| Year |
2010 |
Publication |
Journal of Applied Ecology |
Abbreviated Journal |
J. Appl. Ecol. |
| Volume |
47 |
Issue |
4 |
Pages |
821-831 |
| Keywords |
canopy openings; functional traits; incidence function model; light partitioning; selective logging; tree growth rates; tropical rain forest |
| Abstract |
P>1. Modelling growth strategies among tropical trees is an important objective in predicting the response of tree dynamics to selective logging and in gaining insights into the ecological processes that structure tree communities in managed tropical forests. 2. We developed a disturbance index to model the effects of distance to and area of logging gaps on stem radial growth rates. This index was tested using census data of 43 neotropical tree species, representing a variety of life-history strategies and developmental stages, from a selectively logged forest at Paracou, French Guiana. Growth strategies were analyzed in light of two indicators: the inherent species growth rate (when disturbance index is null) and the species reaction (change in growth rate) to logging gaps. 3. Across species, the predicted inherent growth rates in unlogged forest ranged from 0 center dot 25 to 6 center dot 47 mm year-1, with an average growth of 2 center dot 29 mm year-1. Ontogenetic shifts in inherent growth rate were found in 26 of the 43 species. 4. Species growth response to logging gaps varied widely among species but was significantly positive for 27 species. The effect of ontogeny on growth response to logging was retained for 14 species, and species with inherent fast growth rate (5 mm year-1) responded less to logging gap disturbances than did species with slow inherent growth (1 mm year-1). 5. Functional traits explained 19-42% of the variation in the inherent growth rate and in species' response across all developmental stages. Whereas maximum diameters and seed mass were strong predictors of inherent growth rate, maximum height, wood density, mode of germination and stem architecture were additionally involved in tree growth response. 6. Synthesis and applications: This study provides a necessary framework for developing predictive post-logging growth models for the thousands of species comprising tropical forests and is sufficiently general to apply to a broad range of managed tropical forests. |
| Address |
[Herault, Bruno] Univ Antilles Guyane, UMR Ecol Forets Guyane, F-97387 Kourou, France, Email: bruno.herault@ecofog.gf |
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WILEY-BLACKWELL PUBLISHING, INC |
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0021-8901 |
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ISI:000279405100012 |
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no |
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EcoFoG @ eric.marcon @ |
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53 |
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| Author |
Herault, B.; Thoen, D. |
| Title |
How habitat area, local and regional factors shape plant assemblages in isolated closed depressions |
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Journal Article |
| Year |
2009 |
Publication |
Acta Oecologica-International Journal of Ecology |
Abbreviated Journal |
Acta Oecol.-Int. J. Ecol. |
| Volume |
35 |
Issue |
3 |
Pages |
385-392 |
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Closed depressions; Colonization; Connectivity; Fragmented habitats; Emergent Groups; Open and forested landscape; Life-history traits |
| Abstract |
Classifying species by shared life-history traits is important if common ecological response groups are to be identified among different species. We investigated how habitat area, local and regional factors shape plant communities in small isolated closed depressions, and how the species richness is related to the interplay between environmental factors and specific life-history trait combinations. In Central-Western Europe, 169 closed depressions were completely Surveyed for plant presence in two highly contrasted landscapes (forested and open landscapes). All species were clustered into 9 Emergent Groups based oil 10 life-history traits related to plant dispersal, establishment and persistence. Habitat areas were related to species presence using logistic regressions. Most Emergent Groups were more area-dependent in open than in forested landscapes, owing to heterogeneous light levels in forest weakening the species-area relationship. In open landscapes, Floating Hydrophytes were severely underrepresented in very small depressions, owing to the absence of waterfowl poulation. Local environmental and regional factors were related to species richness using Generalized Linear Models. In open landscapes, local environmental factors such as water conductivity or soil productivity are respectively the main predictors. In forested landscapes, the abundance of most Emergent Groups Was better predicted by regional factors, i.e., habitat connectivity and distance to the forest edge. Forested landscapes strongly impeded the closed depressions' colonization by the less mobile Emergent Groups Such as Large-seeded Perennials. (C) 2009 Elsevier Masson SAS. All rights reserved. |
| Address |
[Herault, Bruno] Univ Antilles Guyane, UMR EcoFoG, F-97387 Kourou, France, Email: bruno.herault@ecofog.gf |
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GAUTHIER-VILLARS/EDITIONS ELSEVIER |
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1146-609X |
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ISI:000266174400006 |
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EcoFoG @ eric.marcon @ |
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112 |
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Herault, B.; Thoen, D. |
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Diversity of plant assemblages in isolated depressional wetlands from Central-Western Europe |
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Journal Article |
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2008 |
Publication |
Biodiversity and Conservation |
Abbreviated Journal |
Biodivers. Conserv. |
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17 |
Issue |
9 |
Pages |
2169-2183 |
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closed depressions; connectivity; fens; forest; grassland; habitat area; landscape matrix |
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A closed depression is defined as a geomorphologic element where a sediment depository is encircled by hillslopes. Despite the fact that closed depressions are often the only stagnant water points in many European landscapes, few ecological researches on their plant assemblages have been done. The main goal of this study was to give first results of the environmental factors responsible for the vegetation composition, richness and rarity in the closed depressions of the Lorraine biogeographical district (Belgium, France and grand-duche de Luxembourg). We surveyed for plant presence 85 forest and 77 grassland closed depressions. For each site, wetland area, local environmental factors and regional connectivities registered. For each species, the Ellenberg values were compiled. To investigate the main source of variation in species composition and in species richness (including richness in rare species), Non-metric Multidimensional Scaling analyses and Generalized Linear Models were respectively used. Species pools in forest (forest and preforest species) and in grassland (bog plants, pioneers, helophytes) were quite different. In both landscapes, a gradient from plants typical of basic high-productive soils to plants typical of acid low-productive soils reflects a shared successional gradient. The accumulation of organic matter allowed the establishment of Sphagnum spp., which slowly acidified the soil and thus acted as ecosystem engineers for the arrival of bog plants. Moreover, the species composition was additionally driven by the plant light tolerance in forests and by the plant water requirements in grasslands. Mechanisms of species accumulation (increase in species richness) were different in forests and in grasslands: respectively related to the plant light tolerance and to the wetland area. At the regional level, the averaged soil productivity was negatively related to the richness in rare species. Indeed, perennial highly-competitive plants such as Glyceria spp., Iris pseudacorus or Urtica dioica impeded the establishment of smaller and rarer species. At the habitat level, isolated closed depressions (due to either low connectivity or low grazing pressure) have more habitat rare species, giving evidences of dispersal limitation in plant assemblages of closed depressions. |
| Address |
[Herault, Bruno] Inst Bot, Ctr Ecol Vegetale & Hydrol, F-67083 Strasbourg, France, Email: bruno.herault@cirad.fr |
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SPRINGER |
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0960-3115 |
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ISI:000257486400008 |
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EcoFoG @ eric.marcon @ |
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135 |
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Heu, Katy ; Romoli, Ottavia ; Schonbeck, Johan Claes ; Ajenoe, Rachel ; Epelboin, Yanouk ; Kircher, Verena ; Houel, Emeline ; Estevez, Yannick ; Gendrin, Mathilde |
| Title |
The Effect of Secondary Metabolites Produced by Serratia marcescens on Aedes aegypti and Its Microbiota |
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Journal Article |
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2021 |
Publication |
Frontiers in Microbiology |
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12 |
Issue |
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Pages |
645701 |
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Serratia marcescens is a bacterial species widely found in the environment, which very efficiently colonizes mosquitoes. In this study, we isolated a red-pigmented S. marcescens strain from our mosquito colony (called S. marcescens VA). This red pigmentation is caused by the production of prodigiosin, a molecule with antibacterial properties. To investigate the role of prodigiosin on mosquito- S. marcescens interactions, we produced two white mutants of S. marcescens VA by random mutagenesis. Whole genome sequencing and chemical analyses suggest that one mutant has a nonsense mutation in the gene encoding prodigiosin synthase, while the other one is deficient in the production of several types of secondary metabolites including prodigiosin and serratamolide. We used our mutants to investigate how S. marcescens secondary metabolites affect the mosquito and its microbiota. Our in vitro tests indicated that S. marcescens VA inhibits the growth of several mosquito microbiota isolates using a combination of prodigiosin and other secondary metabolites, corroborating published data. This strain requires secondary metabolites other than prodigiosin for its proteolytic and hemolytic activities. In the mosquito, we observed that S. marcescens VA is highly virulent to larvae in a prodigiosin-dependent manner, while its virulence on adults is lower and largely depends on other metabolites |
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Frontiers Media |
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| ISSN |
|
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
|
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
1024 |
| Permanent link to this record |
