| Records |
| Author |
Arranz, S.E.; Avarre, J.-C.; Balasundaram, C.; Bouza, C.; Calcaterra, N.B.; Cezilly, F.; Chen, S.-L.; Cipriani, G.; Cruz, V.P.; D'Esposito, D.; Daniel, C.; Dejean, A.; Dharaneedharan, S.; Díaz, J.; Du, M.; Durand, J.-D.; Dziadek, J.; Foresti, F.; Peng-Cheng, F.; Gao, Q.-B.; García, G.; Gauffre-Autelin, P.; Giovino, A.; Goswami, M.; Guarino, C.; Guerra-Varela, J.; Gutiérrez, V.; Harris, D.J.; Heo, M.-S.; Khan, G.; Kim, M.; Lakra, W.S.; Lauth, J.; Leclercq, P.; Lee, J.; Lee, S.-H.; Lee, S.; Lee, T.; Li, Y.-H.; Liu, H.; Liu, S.; Malé, P.-J.G.; Mandhan, R.P.; Martinez, P.; Mayer, V.E.; Mendel, J.; Mendes, N.J.; Mendonça, F.F.; Minias, A.; Minias, P.; Oh, K.-S.; Oliveira, C.; Orivel, J.; Orsini, L.; Pardo, B.G.; Perera, A.; Procaccini, G.; Rato, C.; Ríos, N.; Scibetta, S.; Sharma, B.S.; Sierens, T.; Singh, A.; Terer, T.; Triest, L.; Urbánková, S.; Vera, M.; Villanova, G.V.; Voglmayr, H.; Vyskočilová, M.; Wang, H.; Wang, J.-L.; Wattier, R.A.; Xing, R.; Yadav, K.; Yin, G.; Yuan, Y.; Yun, J.-C.; Zhang, F.-Q.; Zhang, J.-H.; Zhuang, Z. |
| Title |
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2012-31 January 2013 |
Type |
Journal Article |
| Year |
2013 |
Publication |
Molecular Ecology Resources |
Abbreviated Journal |
Mol. Ecol. Resour. |
| Volume |
13 |
Issue |
3 |
Pages |
546-549 |
| Keywords |
|
| Abstract |
This article documents the addition of 268 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Alburnoides bipunctatus, Chamaerops humilis, Chlidonias hybrida, Cyperus papyrus, Fusarium graminearum, Loxigilla barbadensis, Macrobrachium rosenbergii, Odontesthes bonariensis, Pelteobagrus vachelli, Posidonia oceanica, Potamotrygon motoro, Rhamdia quelen, Sarotherodon melanotheron heudelotii, Sibiraea angustata, Takifugu rubripes, Tarentola mauritanica, Trimmatostroma sp. and Wallago attu. These loci were cross-tested on the following species: Alburnoides fasciatus, Alburnoides kubanicus, Alburnoides maculatus, Alburnoides ohridanus, Alburnoides prespensis, Alburnoides rossicus, Alburnoides strymonicus, Alburnoides thessalicus, Alburnoides tzanevi, Carassius carassius, Fusarium asiaticum, Leucaspius delineatus, Loxigilla noctis dominica, Pelecus cultratus, Phoenix canariensis, Potamotrygon falkneri, Trachycarpus fortune and Vimba vimba. © 2013 Blackwell Publishing Ltd. |
Address  |
Key Laboratory of Eco-Environments of Three Gorges Reservoir Region, Ministry of Education, School of Life Sciences, Southwest University, Chongqing, 400715, China |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
1755098x (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 2 May 2013; Source: Scopus; :doi 10.1111/1755-0998.12095; Language of Original Document: English; Correspondence Address: Arranz, S.E.; Molecular Ecology Resources Editorial Office, 6270 University Blvd, Vancouver, BC, V6T 1Z4, Canada; email: editorial.office@molecol.com |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
484 |
| Permanent link to this record |
| |
|
| |
| Author |
Malé, P.-J.G.; Leroy, C.; Dejean, A.; Quilichini, A.; Orivel, J. |
| Title |
An ant symbiont directly and indirectly limits its host plant's reproductive success |
Type |
Journal Article |
| Year |
2012 |
Publication |
Evolutionary Ecology |
Abbreviated Journal |
Evol. Ecol. |
| Volume |
26 |
Issue |
1 |
Pages |
55-63 |
| Keywords |
Cheater; Evolutionary conflict; Mutualism breakdown; Myrmecophyte; Pollination |
| Abstract |
In theory, mutualisms are intrinsically unstable, and the search for the maximum profit at the minimum cost should lead every mutualist to become a parasite. From an empirical point of view, mutualisms are ubiquitous and of major importance to ecosystems, suggesting the existence of mechanisms that enhance the maintenance of such relationships. We focused on the obligatory myrmecophytic association between the Neotropical plant Hirtella physophora (Chrysobalanaceae) and the ant Allomerus decemarticulatus (Myrmicinae). The plant shelters the ants in leaf pouches in exchange for protection from phytophagous insects. We experimentally demonstrated that the ants partially castrate their host plant by destroying almost two-thirds of its floral buds. The ants also impede pollination through their presence and interactions with pollinators. These results reveal that ant activity negatively affects the plant's reproduction both directly and indirectly. This dual negative effect does not result in the complete castration of the plant. We also highlight major limitations to plant reproduction due to the spontaneous abscission of flowers and to the limited quantity and/or poor quality of the pollen. These limitations must not be overlooked since they can alter the outcome of the association of H. physophora with its ant partner. We therefore conclude that the evolutionary fate of the relationship depends on both ant castration intensity and obstacles to plant fertilization not related to the presence of ants. © 2011 Springer Science+Business Media B.V. |
| Address |
Jardin Botanique Henri Gaussen, 39 Allées Jules Guesde, 31062 Toulouse, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
02697653 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 2 January 2012; Source: Scopus; Coden: Evece; doi: 10.1007/s10682-011-9485-7; Language of Original Document: English; Correspondence Address: Malé, P.-J. G.; CNRS, EDB (Laboratoire Evolution et Diversité Biologique), UMR 5174, Université Paul Sabatier, 118 Route de Narbonne, 31062 Toulouse Cedex 9, France; email: pjmale@cict.fr |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
377 |
| Permanent link to this record |
| |
|
| |
| Author |
Talaga, S.; Petitclerc, F.; Carrias, J.-F.; Dezerald, O.; Leroy, C.; Céréghino, R.; Dejean, A. |
| Title |
Environmental drivers of community diversity in a neotropical urban landscape: a multi-scale analysis |
Type |
Journal Article |
| Year |
2017 |
Publication |
Landscape Ecology |
Abbreviated Journal |
Landscape Ecology |
| Volume |
32 |
Issue |
9 |
Pages |
1805-1818 |
| Keywords |
Aquatic metacommunity; Landscape ecology; Mosquitoes; Neotropics; Scale dependency; Tank bromeliads; Urban ecology |
| Abstract |
Context: Many aquatic communities are linked by the aerial dispersal of multiple, interacting species and are thus structured by processes occurring in both the aquatic and terrestrial compartments of the ecosystem. Objectives: To evaluate the environmental factors shaping the aquatic macroinvertebrate communities associated with tank bromeliads in an urban landscape. Methods: Thirty-two bromeliads were georeferenced to assess the spatial distribution of the aquatic meta-habitat in one city. The relative influence of the aquatic and terrestrial habitats on the structure of macroinvertebrate communities was analyzed at four spatial scales (radius = 10, 30, 50, and 70 m) using redundancy analyses. Results: We sorted 18,352 aquatic macroinvertebrates into 29 taxa. Water volume and the amount of organic matter explained a significant part of the taxa variance, regardless of spatial scale. The remaining variance was explained by the meta-habitat size (i.e., the water volume for all of the bromeliads within a given surface area), the distance to the nearest building at small scales, and the surface area of buildings plus ground cover at larger scales. At small scales, the meta-habitat size influenced the two most frequent mosquito species in opposite ways, suggesting spatial competition and coexistence. Greater vegetation cover favored the presence of a top predator. Conclusions: The size of the meta-habitat and urban landscape characteristics influence the structure of aquatic communities in tank bromeliads, including mosquito larval abundance. Modifications to this landscape will affect both the terrestrial and aquatic compartments of the urban ecosystem, offering prospects for mosquito management during urban planning. © 2017, Springer Science+Business Media B.V. |
| Address |
IRD; UMR AMAP (botAnique et Modélisation de l’Architecture des Plantes et des végétations), Boulevard de la Lironde, TA A‐51/PS2, Montpellier Cedex 5, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
|
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 18 December 2017 |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
777 |
| Permanent link to this record |
| |
|
| |
| Author |
Odonne, G.; Berger, F.; Stien, D.; Grenand, P.; Bourdy, G. |
| Title |
Treatment of leishmaniasis in the Oyapock basin (French Guiana): A K.A.P. survey and analysis of the evolution of phytotherapy knowledge amongst Wayãpi Indians |
Type |
Journal Article |
| Year |
2011 |
Publication |
Journal of Ethnopharmacology |
Abbreviated Journal |
J. Ethnopharmacol. |
| Volume |
137 |
Issue |
3 |
Pages |
1228-1239 |
| Keywords |
Camopi River; French Guiana; Intercultural exchanges; K.A.P.; Knowledge attitude and practices; Knowledge evolution; Leishmaniasis; Oyapock River; Quantitative ethnopharmacology; Teko; Traditional remedies; Wayãpi |
| Abstract |
Ethnopharmacological relevance: Cutaneous leishmaniasis is a neglected disease with a high incidence in French Guiana, mainly in the middle and upper Oyapock basin, where Amerindian and some Brazilian people live. The main goals of this work were (i) to assess the knowledge about leishmaniasis in the different populations of the middle and upper Oyapock basin, (ii) to study the therapeutic strategies adopted by people affected by leishmaniasis and (iii) to document the use of phytotherapeutic remedies for leishmaniasis. Knowledge, attitudes and practices (K.A.P.) related to this disease and its treatments have been studied according to cultural group and geographical settlement. Within the Wayãpi group, the evolution of the knowledge of phytoremedies over the last 20 years has been characterised by literature-based comparisons. Materials and methods: A total of 144 questionnaires were administered in all the villages of the upper Oyapock and Camopi basins. Correspondence analyses were used for multivariate analysis. Plant species were identified at the Cayenne Herbarium (CAY). Results: The biomedical concept of leishmaniasis correlates well with the Teko and Wayãpi concepts of kalasapa and kalasapau. Although the vector of this disease was not correctly identified, the most commonly cited aetiology (74.5%) was vector-borne, and related epidemiological schemes correlate well with the one encountered in French Guiana. Theoretically and practically, health centres were the most commonly used resource for diagnostic in instances of leishmaniasis infection (65.9%), independently of the patient's cultural group, along with the use of pharmaceutical drugs (85.3%). Pharmaceuticals were commonly utilised despite the frequent (51.5%) use of phytotherapeutic remedies, alone or in combination with drugs. The most cited medicinal plant species for the treatment of leishmaniasis included Eleutherine bulbosa (Mill.) Urb. (Iridaceae, cited 14 times), Euterpe oleracea Mart. (Arecaceae, 9), Cecropia obtusa Trecul (Cecropiaceae, 8), Jatropha curcas L. (Euphorbiaceae, 7), Ceiba pentandra (L.) Gaertn. (Bombacaceae, 6) and Carica papaya L. (Caricaceae, 6). Multiple correspondence analyses demonstrated that the species used in leishmaniasis remedies are more prone to vary by the user's place of residence than by their cultural origin, which indicates that exchange of knowledge about leishmaniasis remedies has occurred across different cultural groups. Literature-based comparisons between the remedies for leishmaniasis used by the Wayãpi during the 1980s showed a striking evolution, both in terms of diversity of species and number of plants used. The large number of species shared with other Guianese groups argues for intercultural exchange and may explain the majority (57.1%) of the newly used species highlighted in our study. Conclusions: Leishmaniasis is a well-known disease in the studied area. Phytotherapeutic treatments are still in use, although they are not the main source of remedies, and should undergo pharmacological studies to evaluate their potential therapeutic value. © 2011 Elsevier Ireland Ltd. All rights reserved. |
| Address |
IRD, UMR152, F-31062 Toulouse Cedex 9, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
03788741 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 8 November 2011; Source: Scopus; Article in Press; Coden: Joetd; doi: 10.1016/j.jep.2011.07.044; Language of Original Document: English; Correspondence Address: Odonne, G.; CNRS-UMR Ecofog, Université des Antilles et de la Guyane, 97337 Cayenne Cedex, Franceemail: guillaume.odonne@gmail.com |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
368 |
| Permanent link to this record |
| |
|
| |
| Author |
Hamon, P.; Duroy, P.-O.; Dubreuil-Tranchant, C.; Mafra D'Almeida Costa, P.; Duret, C.; Razafinarivo, N.J.; Couturon, E.; Hamon, S.; De Kochko, A.; Poncet, V.; Guyot, R. |
| Title |
Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae) |
Type |
Journal Article |
| Year |
2011 |
Publication |
Molecular Genetics and Genomics |
Abbreviated Journal |
Mol. Genet. Genomics |
| Volume |
285 |
Issue |
6 |
Pages |
447-460 |
| Keywords |
Coffea; Evolution; Genetic diversity; LTR-retrotransposons; article; coffee; controlled study; Divo; gene amplification; gene dosage; gene expression; gene insertion; gene locus; gene sequence; genetic identification; genetic polymorphism; genetic variability; molecular cloning; Nana; nonhuman; nucleotide sequence; phylogeny; plant evolution; plant gene; priority journal; Psilanthus; random amplified microsatellite; retroposon; Rubiaceae; species differentiation; tree; Ty1 copia gene; Coffea; Genes, Plant; Genome, Plant; Phylogeny; Retroelements |
| Abstract |
In the study, we developed new markers for phylogenetic relationships and intraspecies differentiation in Coffea. Nana and Divo, two novel Ty1-copia LTR-retrotransposon families, were isolated through C. canephora BAC clone sequencing. Nana- and Divo-based markers were used to test their: (1) ability to resolve recent phylogenetic relationships; (2) efficiency in detecting intra-species differentiation. Sequence-specific amplification polymorphism (SSAP), retrotransposon-microsatellite amplified polymorphism (REMAP) and retrotransposon-based insertion polymorphism (RBIP) approaches were applied to 182 accessions (31 Coffea species and one Psilanthus accession). Nana- and Divo-based markers revealed contrasted transpositional histories. At the BAC clone locus, RBIP results on C. canephora demonstrated that Nana insertion took place prior to C. canephora differentiation, while Divo insertion occurred after differentiation. Combined SSAP and REMAP data showed that Nana could resolve Coffea lineages, while Divo was efficient at a lower taxonomic level. The combined results indicated that the retrotransposon-based markers were useful in highlighting Coffea genetic diversity and the chronological pattern of speciation/differentiation events. Ongoing complete sequencing of the C. canephora genome will soon enable exhaustive identification of LTR-RTN families, as well as more precise in-depth analyses on contributions to genome size variation and Coffea evolution. © 2011 Springer-Verlag. |
| Address |
IRD, UMR DIADE, BP 50172, Sainte Clotilde Cedex, La Réunion 97492, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
16174615 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 21 October 2011; Source: Scopus; Coden: Mggoa; doi: 10.1007/s00438-011-0617-0; PubMed ID: 21505885; Language of Original Document: English; Correspondence Address: Hamon, P.; IRD, UMR DIADE, BP 64501, Montpellier Cedex 5, France; email: perla.hamon@ird.fr; Molecular Sequence Numbers: GENBANK: DV666936, HM755952, HM755953;; Chemicals/CAS: Retroelements |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
344 |
| Permanent link to this record |
| |
|
| |
| Author |
Mony, R.; Dejean, A.; Bilong, C.F.B.; Kenne, M.; Rouland-Lefèvre, C. |
| Title |
Melissotarsus ants are likely able to digest plant polysaccharides |
Type |
Journal Article |
| Year |
2013 |
Publication |
Comptes Rendus – Biologies |
Abbreviated Journal |
C. R. Biol. |
| Volume |
336 |
Issue |
10 |
Pages |
500-504 |
| Keywords |
Ant-plant interactions; Degradation of plant material; Enzymatic activity; Melissotarsus ants |
| Abstract |
Melissotarsus ants have an extremely specialized set of behaviours. Both workers and gynes tunnel galleries in their host tree bark. Workers walk with their mesothoracic legs pointing upwards and tend Diaspididae hemiptera for their flesh. The ants use their forelegs to plug the galleries with silk that they secrete themselves. We hypothesised that the ants' energetic needs for nearly constant gallery digging could be satisfied through the absorption of host tree tissues; so, using basic techniques, we examined the digestive capacities of workers from two species. We show that workers are able to degrade oligosaccharides and heterosides as well as, to a lesser degree, polysaccharides. This is one of the rare reports on ants able to digest plant polysaccharides other than starch. © 2013 Académie des sciences. |
| Address |
IRD, UMR BIOEMCO-IBIOS, 32, rue Henri-Varagnat, 93143 Bondy cedex, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
16310691 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 6 December 2013; Source: Scopus; Coden: Crboc; doi: 10.1016/j.crvi.2013.08.003; Language of Original Document: English; Correspondence Address: Dejean, A.; Université de Toulouse, UPS, Ecolab, 118, route de Narbonne, 31062 Toulouse, France; email: alain.dejean@wanadoo.fr; References: Hölldobler, B., Wilson, E.O., (1990) The Ants, , Harvard University Press Cambridge, MA, USA 730 p; Duchesne, L.C., Larson, D.W., Cellulose and the evolution of plant life (1989) BioScience, 39, pp. 238-241; Watanabe, H., Tokuda, G., Cellulolytic Systems in Insects (2010) Annu. Rev. Entomol., 55, pp. 609-632; Wenzel, M., Schonig, I., Berchtold, M., Kampfer, P., König, K., Aerobic and facultatively anaerobic cellulolytic bacteria from the gut of the Termite Zootermopsis angusticollis (2002) J. Appl. Microbiol., 92, pp. 32-40; Brune, A., Microbial symbioses in the digestive tract of lower termites (2011) Beneficial Microorganisms in Multicellular Life Forms, pp. 3-25. , E. Rosenberg, U. Gophna, Heidelberg Springer; Tokuda, G., Watanabe, H., Hidden cellulases in termites: Revision of an old hypothesis (2007) Biol. Lett., 3, pp. 336-339; Nobre, T., Aanen, D.K., Fungiculture or termite husbandry? The ruminant hypothesis (2012) Insects, 3, pp. 307-323; Zientz, E., Feldhaar, H., Stoll, S., Gross, R., Insights into the microbial world associated with ants (2005) Arch. Microbiol., 184, pp. 199-206; Aylward, F., Burnum, K.E., Scott, J.J., Suen, G., Tringe, S.G., Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens (2012) ISME J., pp. 1-14; Cook, S.C., Davidson, D.W., Nutritional and functional biology of exudate-feeding ants (2006) Entomol. Exp. Appl., 118, pp. 1-10; He, H., Chen, Y., Zhang, Y., Wei, C., Bacteria associated with gut lumen of Camponotus japonicus Mayr (2011) Environ. Entomol., 40, pp. 1405-1409; Blochmann, F., Über das Vorkommen von bakterienähnlichen Gebilden in den Geweben und Eiern verschiedener Insekten (1892) Zentbl. Bakteriol., 11, pp. 234-240; Feldhaar, H., Straka, J., Krischke, M., Berthold, K., Stoll, S., Nutritional upgrading for omnivorous carpenter ants by the endosymbiont Blochmannia (2007) BMC Biol., 5, p. 48; De Souza, D.J., Bézier, A., Depoix, D., Drezen, J.M., Lenoir, A., Blochmannia endosymbionts improve colony growth and immune defence in the ant Camponotus fellah (2009) BMC Microbiol., 9, p. 29; Van Borm, S., Buschinger, A., Boomsma, J.J., Billen, J., Tetraponera ants have gut symbionts related to nitrogen-fixing root-nodule bacteria (2002) Proc. R. Soc. Lond. B., 269, pp. 2023-2027; Eilmus, S., Heil, M., Bacterial associates of arboreal ants and their putative functions in an obligate ant-plant mutualism (2009) Appl. Env. Microbiol., 75, pp. 4324-4332; Russell, J.A., Moreau, C.S., Goldman-Huertas, B., Fujiwara, M., Lohman, D.J., Pierce, N.E., Bacterial gut symbionts are tightly linked with the evolution of herbivory in ants (2009) Proc. Natl. Acad. Sci. USA, 106, pp. 21236-21241; Delage-Darchen, B., Une fourmi de Côte d'Ivoire: Melissotarsus titubans Del., N. Sp. (1972) Insect. Soc., 19, pp. 213-226; Prins, A.J., Ben-Dov, Y., Rust, D.J., A new observation on the association between ants (Hymenoptera: Formicidae) and armoured scale insects (Homoptera: Diaspididae) (1975) J. Entomol. Soc. S. Afr., 38, pp. 211-216; Mony, R., Kenne, M., Dejean, A., (2002) Biology and Ecology of Pest Ants of the Genus Melissotarsus (Formicidae: Myrmicinae), with Special Reference to Tropical Fruit Tree Attacks, Sociobiology, 40, pp. 645-654; Mony, R., Fisher, B.L., Kenne, M., Tindo, M., Dejean, A., Behavioural ecology of bark-digging ants of the genus Melissotarsus (2007) Funct. Ecosyst. Commun., 1, pp. 121-128; Fisher, B.L., Robertson, H.G., Silk production by adult workers of the ant Melissotarsus emeryi (Hymenoptera, Formicidae) in South African fynbos (1999) Insect. Soc., 46, pp. 78-83; Sanson, G., The biomechanics of browsing and grazing (2006) Am. J. Bot., 93, pp. 1531-1545; Clissold, F., Sanson, G.D., Read, J., The paradoxical effects nutrient ratios and supply rates on an outbreaking insect herbivore, the Australian plague locust (2006) J. Anim. Ecol., 75, pp. 1000-1013; Cannon, C.A., (1998) Nutritional Ecology of the Carpenter Ant Camponotus Pennsylvanicus (De Geer): Macronutrient Preference and Particle Consumption, , (PhD thesis) Blacsburg VA; Eisner, T., A comparative morphological study of the proventriculus of ants (Hymenoptera, Formicidae) (1957) Bull. Mus. Comp. Zool., 116, pp. 441-490; Caetano, F.H., Can we use the digestive tract for phyllogenetic studies in ants (1990) Social Insects and the Environment, pp. 321-322. , G.K. Veeresh, B. Mallik, C.A. Viraktamath, Oxford & IBH publishing co. New Dehli; Delage, B., Recherches sur l'alimentation des fourmis granivores Messor capitatus Latr (1962) Insect. Soc., 9, pp. 137-143; Oettler, J., Johnson, R.A., The old ladies of the seed harvester ant Pogonomyrmex rugosus: Foraging performed by two groups of workers (2009) J. Insect. Behav., 22, pp. 217-226; Abbott, A., Nutrient dynamic of ants (1977) Production Ecology of Ants and Termites, pp. 233-244. , M.V. Brian, Cambridge University Press Cambridge; D'Ettorre, P., Mora, P., Dibangou, V., Rouland, C., Errard, C., The role of symbiotic fungus in the digestive metabolism of two species of fungus-growing ants (2002) J. Comp. Physiol. B, 172, pp. 169-176; Rouland, C., Lenoir, F., Lepage, M., The role of the symbiotic fungus in the digestive metabolism of several species of fungus-growing termites (1991) Comp. Biochem. Physiol., 99 A, pp. 657-663; Williams, J., Villaroya, H., Petek Galactosidase, F., II, III and IV from seeds of Trifolium repens (1978) Biochem. J., 175, pp. 1069-1077; Werner, W., Rey, H.G., Wielinger, R.H., Properties of a new chromogen for determination of glucose in blood according to the COD/POD method (1970) Anal. Chem., 252, pp. 224-228; Mora, P., Rouland, C., Comparison of hydrolytic enzyme produced during growth on carboidrate substrated by Termitomyces associates of Pseudacanthotermes spiniger and Microtermes subhyalinus (isopteran: Termitidae) (1994) Sociobiology, 26, pp. 39-53; Koning, R.E., Secondary Growth. Plant Physiology Information, , http://plantphys.info/plant_biology/secondary.shtml; Scheffrahn, R.H., Termites (Isoptera) (2008) Encyclopedia of Entomology Part 20, pp. 3737-3747. , J.L. Capinera, Springer Berlin; Richard, F.J., Mora, P., Errard, C., Rouland, C., Digestive capacities of leaf-cutting ants and the contribution of their cultivar to the degradation of plant material (2005) J. Comp. Physiol. B, 175, pp. 297-303; Ayre, G.L., The relationships between food and digestive enzymes in five species of ants (Hymenoptera: Formicidae) (1967) Can. Entomol., 99, pp. 408-411; Went, F.W., Wheeler, J., Wheeler, G.C., Feeding and digestion in some ants (Veromessor and Manica) (1972) BioScience, 22, pp. 82-88; Moller, I.E., De Fine Licht, H.H., Harholt, J., Willats, G.T., Boomsma, J.J., The dynamics of plant cell-wall polysaccharide decomposition in leaf-cutting ant fungus garden (2011) PloS ONE, 6, p. 17506 |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
516 |
| Permanent link to this record |
| |
|
| |
| Author |
Laurans, M.; Herault, B.; Vieilledent, G.; Vincent, G. |
| Title |
Vertical stratification reduces competition for light in dense tropical forests |
Type |
Journal Article |
| Year |
2014 |
Publication |
Forest Ecology and Management |
Abbreviated Journal |
For. Ecol. Manage. |
| Volume |
329 |
Issue |
|
Pages |
79-88 |
| Keywords |
Adult stature; French Guiana; Hierarchical bayesian model; Local crowding; Niche partitioning; Bayesian networks; Growth rate; Adult stature; French Guiana; Hierarchical Bayesian modeling; Local crowding; Niche partitioning; Reforestation |
| Abstract |
Differential growth response to light level is widely accepted as a potential mechanism for maintaining tree species richness in tropical forests. The position of tree species in the hierarchy of the canopy is considered an important indicator of species light capture and growth strategy. Paradoxically, the relative importance of species identity and competition for light in determining individual tree growth is poorly documented at the adult stage. In this study, we used a hierarchical Bayesian model to quantify the overall importance of species identity, light and belowground competition as determinants of tree growth in French Guiana tropical forest. Light competitive status is assessed by a crown exposure score and below ground competition is estimated from local crowding. We examined species sensitivity to both types of competition in relation to adult stature. Our results are based on annual diameter increments of more than 13,510 stems from 282 species monitored over 10years. Mean annual growth rate was 0.11cmy-1 with species identity explaining 35% of the individual variation in growth rate. Crown exposure and local crowding explained 3.5% and 2.4% of the variation in growth rate, respectively. Predicted changes in growth rate as crown exposure (resp. local crowding) index changed from lower to upper interquartile level was 0.03cmy-1 (resp. 0.02cmy-1). Species sensitivity to crown exposure and to local crowding were positively correlated (i) with predicted growth rate at high-light standardized conditions and (ii) with adult stature.This vertical niche partitioning is invoked to explain the limited contribution made by level of light competition for predicting individual tropical tree growth as the community-level response is dominated by the abundance of small-statured species with low sensitivity to light level.Light appears to drive the stem growth rate of tropical trees through species differentiation more than through individual tree growth limitation. This vertical stratification complements the previously reported regeneration niche and together these provide evidence for light niche partitioning in the three-dimensional space of tropical forests. © 2014 Elsevier B.V. |
| Address |
IRD, UMR AMAP, TA A-51/PS1, Bd de la Lironde, 34398 Montpellier Cedex 5, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
Elsevier |
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
03781127 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 30 July 2014; Coden: Fecmd; Correspondence Address: Laurans, M.; CIRAD, UMR AMAP, TA A-51/PS1, Bd de la Lironde, 34398 Montpellier Cedex 5, France; email: laurans@cirad.fr |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
551 |
| Permanent link to this record |
| |
|
| |
| Author |
Vincent, G.; Weissenbacher, E.; Sabatier, D.; Blanc, L.; Proisy, C.; Couteron, P. |
| Title |
Detection des variations de structure de peuplements en foret dense tropicale humide par lidar aeroporte |
Type |
Journal Article |
| Year |
2010 |
Publication |
Revue Francaise de Photogrammetrie et de Teledetection |
Abbreviated Journal |
Rev. Fr. Photogramm. Teledetect. |
| Volume |
191 |
Issue |
|
Pages |
42-51 |
| Keywords |
Above-ground biomass estimation; Canopy height model; Stem diameter distribution; Tropical moist forest; Above ground biomass; Above ground level; Airborne LiDAR; Basal area; Canopy Height Models; Carbon stocks; Characterisation; Classical fields; Coefficient of variation; Diameter distributions; Digital terrain model; Flooded areas; Forest ecology; Forest structure; Forest type; High spatial resolution; Individual tree; LIDAR data; Light detection and ranging; Local statistics; Long term; Management issues; Natural forests; Natural variation; Pearson correlation coefficients; Quadratic mean diameter; Soil characteristics; Soil cover; Spatial changes; Spatial resolution; Stem density; Stem diameter; Stem height; Strong correlation; Tree height; Tropical moist forest; Tropical rain forest; Vegetation structure; Vertical accuracy; Water regime; Discriminant analysis; Ecology; Optical radar; Remote sensing; Soils; Statistics; Stem cells; Temperature control; Tropics; Vegetation; Forestry; Biomass; Discriminant Analysis; Ecology; Forest Canopy; Forestry; Radar; Remote Sensing; Stems; Temperature Control; Tropical Atmospheres |
| Abstract |
Characterisation of forest structure is a major stake for forestry, species conservation, carbon stock estimates and many forest ecology and management issues. At large scale natural forest structure tends to vary according to climate and geomorphomology (Paget, 1999; Steege et al., 2006) while soil characteristics (and notably water regime) and syMgenetic stage add some finer scale variation (Oldeman, 1989; Sabatier et al., 1997). Forest structure characterisation traditionally relies on field-based collection of individual tree dimensions such as stem diameter and stem height sampled across tracks of forest (Hall et al., 1998). However, such field intensive methods are costly, and of low accuracy regarding measures of tree heights. Airborne light detection and ranging (LiDAR) technology provides horizontal and vertical Information at high spatial resolutions and vertical accuracies (Lim et al., 2003; Hyyppä et al., 2004). It has the potential for gathering vegetation structure data over large areas rapidly at moderate cost and hence is of particular relevance for poorly sampled, difficult to access and largely unexplored tropical rainforests. In this study we examined the ability of airborne LiDAR to detect spatial changes in the structure of dense tropical rain forest and we probed this remote sensing approach against local statistics derived from stem diameters (i.e. classical field data information) mapped across a large track of forest at a long term experimental site in French Guyana. The large variability in forest structure occurring at the experimental site is du to natural variation of the soil cover (and notably drainage properties) combined with various logging intensities applied 15 years before the LiDAR data were acquired. On this basis ten different forest types were identified at the site (figure 1 and 3). Various stem based statistics were computed for a series of meshes with cells ranging from 30 by 30 m plots to 250 by 250 m plots. These statistics included basal area, stem density, quadratic mean diameter, and diameter distribution percentiles. Similarly local statistics were extracted either from the Canopy Height Model (e.g. median height, mean height, standard height deviation, height coefficient of variation, height percentiles, frequency of hits below 5 m above ground level). Additionally a wetness index (Böhner et al., 2002) was computed at each node of a 5 by 5 m grid from the Digital Terrain Model also extracted from the LiDAR data set. We used both types of cell statistics to discriminate the various forest types. Comparison between the two approaches for a range of spatial resolution is available from in table 1. Results indicate that LiDAR based statistics are essentially as powerful as field based statistics to discriminate forest types at coarse scale. This reflects the very strong correlation between the CHM and the field based stem diameter data. For example (figure 5) the Pearson correlation coefficient between median height and quadratic mean diameter for cells of 125 by 125 m is 0.945 (n=0.72). When a finer resolution is required however as for the detection of seasonally flooded bottomland forest along thalwegs, then LiDAR technology proves more efficient than field based inventories as it combines information from the DTM and the CHM. The wetness index alone correctly retrieves about 2 thirds of the seasonally flooded areas. All in all, discriminant analysis performance of the LiDAR derived information approaches 80% when classifying forests cover at the finest scale of 5 by 5m into 10 different types and reaches 87% when a coarser classification Into 6 forest types is considered (figure 4). |
| Address |
IRD, UMR AMAP, Montpellier, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
17689791 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Cited By (since 1996): 1; Export Date: 21 October 2011; Source: Scopus; Language of Original Document: French; Correspondence Address: Vincent, G.; IRD, UMR AMAP, Kourou – BP 701 (CIRAD) 97387 Kourou cedex -Guyane, France |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
351 |
| Permanent link to this record |
| |
|
| |
| Author |
Hibert, F.; Taberlet, P.; Chave, J.; Scotti-Saintagne, C.; Sabatier, D.; Richard-Hansen, C. |
| Title |
Unveiling the Diet of Elusive Rainforest Herbivores in Next Generation Sequencing Era? The Tapir as a Case Study |
Type |
Journal Article |
| Year |
2013 |
Publication |
PLoS ONE |
Abbreviated Journal |
PLoS ONE |
| Volume |
8 |
Issue |
4 |
Pages |
e60799 |
| Keywords |
|
| Abstract |
Characterizing the trophic relationships between large herbivores and the outstanding plant diversity in rainforest is a major challenge because of their elusiveness. This is crucial to understand the role of these herbivores in the functioning of the rainforest ecosystems. We tested a non-invasive approach based on the high-throughput sequencing of environmental samples using small plant plastid sequences (the trnL P6 loop) and ribosomal ITS1 primers, referred to as DNA metabarcoding, to investigate the diet of the largest neotropical herbivore, the lowland tapir. Sequencing was performed on plant DNA extracted from tapir faeces collected at the Nouragues station, a protected area of French Guiana. In spite of a limited sampling, our approach reliably provided information about the lowland tapir's diet at this site. Indeed, 95.1% and 74.4% of the plant families and genera identified thanks to the trnL P6 loop, respectively, matched with taxa already known to be consumed by tapirs. With this approach we were able to show that two families and eight new genera are also consumed by the lowland tapir. The taxonomic resolution of this method is limited to the plant family and genera. Complementary barcodes, such as a small portion of ITS1, can be used to efficiently narrow identifications down to the species in some problematic families. We will discuss the remaining limitations of this approach and how useful it is at this stage to unravel the diet of elusive rainforest herbivores and better understand their role as engineers of the ecosystem. © 2013 Hibert et al. |
| Address |
IRD, UMR AMAP, Montpellier, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
19326203 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
Export Date: 16 April 2013; Source: Scopus; Art. No.: e60799; :doi 10.1371/journal.pone.0060799; Language of Original Document: English; Correspondence Address: Hibert, F.; Direction Etudes et Recherches, Office National de la Chasse et de la Faune Sauvage, Kourou, French Guiana; email: fabricenz@gmail.com |
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
481 |
| Permanent link to this record |
| |
|
| |
| Author |
Denis, T.; Hérault, B.; Brunaux, O.; Guitet, S.; Richard-Hansen, C. |
| Title |
Weak environmental controls on the composition and diversity of medium and large-sized vertebrate assemblages in neotropical rain forests of the Guiana Shield |
Type |
Journal Article |
| Year |
2018 |
Publication |
Diversity and Distributions |
Abbreviated Journal |
Diversity Distrib. |
| Volume |
24 |
Issue |
11 |
Pages |
1545-1559 |
| Keywords |
biodiversity; birds; functional traits; mammals; refugia hypothesis; spatial patterns; Aves; Mammalia; Vertebrata |
| Abstract |
Aim: Despite their often high-trophic position and their contribution to many ecosystem functions, little is known about the factors affecting assemblage structure of medium- and large-sized neotropical vertebrates. We examined the relative roles played by the physical and biological environment, and by purely spatial processes, in shaping the composition and diversities of these vertebrate assemblages. Then, based on the theory that the Guianan forest cover shrank to isolated pockets during the late Pleistocene–Holocene, we tested if the past forest refugia may have shaped current vertebrate assemblages. Location: French Guiana, Guiana Shield, South America. Methods: Abundances of 19 medium- and large-sized vertebrates were estimated at 21 locations in undisturbed Guianan rain forests. Using taxonomic, functional and phylogenetic metrics, we partitioned the effects of a range of physical and biological environmental conditions and purely spatial predictors in shaping both assemblage composition and (alpha and beta) diversities. Results: We identified a significant, but weak relationship between taxonomic, functional and phylogenetic assemblage composition and environmental conditions. Assemblage diversity patterns were mainly explained by spatial predictors irrespective of the metrics. Current assemblage diversities are correlated with Pleistocene–Holocene forest history, with the highest alpha diversities outside of putative forest refugia, and the highest beta diversities inside these areas. Main conclusions: Current vertebrate assemblage composition is not strongly marked by common environmental factors. Our main conclusion is that assemblage composition results from individual species responses to the environment. Our findings also suggest that dispersal-related processes or more probably historical processes shape (alpha and beta) diversity patterns. In fact, forest fragmentation during Pleistocene–Holocene climate changes could have led to isolated vertebrate assemblages evolving into unique species assemblages creating the current high beta diversity inside refugia, whereas the lower habitat stability outside of refugia could have led to mixed assemblages in areas recolonized by forest vertebrates (current high alpha diversity outside of refugia). |
| Address |
IRD, UMR AMAP (Cirad, CNRS, INRA, Université de Montpellier), Montpellier, France |
| Corporate Author |
|
Thesis |
|
| Publisher |
Blackwell Publishing Ltd |
Place of Publication |
|
Editor |
|
| Language |
|
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
13669516 (Issn) |
ISBN |
|
Medium |
|
| Area |
|
Expedition |
|
Conference |
|
| Notes |
|
Approved |
no |
| Call Number |
EcoFoG @ webmaster @ |
Serial |
833 |
| Permanent link to this record |
