Fanin, N., Barantal, S., Fromin, N., Schimann, H., Schevin, P., & Hattenschwiler, S. (2012). Distinct Microbial Limitations in Litter and Underlying Soil Revealed by Carbon and Nutrient Fertilization in a Tropical Rainforest. PLoS ONE, 7(12), e49990.
Abstract: Human-caused alterations of the carbon and nutrient cycles are expected to impact tropical ecosystems in the near future. Here we evaluated how a combined change in carbon (C), nitrogen (N) and phosphorus (P) availability affects soil and litter microbial respiration and litter decomposition in an undisturbed Amazonian rainforest in French Guiana. In a fully factorial C (as cellulose), N (as urea), and P (as phosphate) fertilization experiment we analyzed a total of 540 litterbag-soil pairs after a 158-day exposure in the field. Rates of substrate-induced respiration (SIR) measured in litter and litter mass loss were similarly affected by fertilization showing the strongest stimulation when N and P were added simultaneously. The stimulating NP effect on litter SIR increased considerably with increasing initial dissolved organic carbon (DOC) concentrations in litter, suggesting that the combined availability of N, P, and a labile C source has a particularly strong effect on microbial activity. Cellulose fertilization, however, did not further stimulate the NP effect. In contrast to litter SIR and litter mass loss, soil SIR was reduced with N fertilization and showed only a positive effect in response to P fertilization that was further enhanced with additional C fertilization. Our data suggest that increased nutrient enrichment in the studied Amazonian rainforest can considerably change microbial activity and litter decomposition, and that these effects differ between the litter layer and the underlying soil. Any resulting change in relative C and nutrient fluxes between the litter layer and the soil can have important consequences for biogeochemical cycles in tropical forest ecosystems. © 2012 Fanin et al.
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Bompy, F., Imbert, D., & Dulormne, M. (2015). Impact patterns of soil salinity variations on the survival rate, growth performances, and physiology of Pterocarpus officinalis seedlings. Trees – Structure and Function, 29(1), 119–128.
Abstract: Key message: Pterocarpus officinalisis able to (1) improve its acclimation capacity if soil salinity increases slowly and (2) benefit from afreshwater episode.
Abstract: One likely effect of global change is an increase of the amplitude of salt variations in the soil of brackish coastal wetland forests. In the Antilles, such forests are dominated by the species Pterocarpus officinalis. The study aimed to determine the effect of 3 salinity levels (freshwater, moderate, and hypersalinity—i.e., 0, 10, and 30 ‰, respectively) and 3 patterns of salinity variation (fast or slow salinity increase, fluctuating salinity) on the growth and ecophysiology of P. officinalis seedlings. P. officinalis proved tolerant to 10 ‰ salinity, even if at this salt concentration the water constraint altered the plant’s water status and reduced stomatal conductance. No impact of the pattern of salinity variation was observed at 10 ‰. Seedlings were strongly affected by hypersalinity, but were able to acclimatize efficiently and to improve their performances (higher survival, total biomass, and photosynthesis) when salinity increased slowly. Young P. officinalis were also able to take advantage of a freshwater episode on the longer term, certainly through leaf desalination associated with enhanced photosynthesis and water use efficiency. Higher soil salinity and more intense dry seasons in the context of climate change could affect the stand-level regeneration potential of P. officinalis seedlings. © 2014, Springer-Verlag Berlin Heidelberg.
Keywords: Acclimation; Leaf chemical composition; Leaf gas exchange; NaCl salinity; Tropical swamp forest; Vegetative growth
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Lambs, L., Bompy, F., & Dulormne, M. (2018). Using an “isotopic spike” from a tropical storm to understand water exchange on a large scale: Case study of Hurricane Rafael in the lesser antilles archipelago, October 2012. Rapid Communications in Mass Spectrometry, 32(6), 457–468.
Abstract: Rationale: Studies of wetland eco-hydrology in tropical coastal areas are scarce, and the use of water stable isotopes can be of great help. Key constraints for their analysis are (i) the small difference in delta18O values between seawater and old evaporated freshwater, and (ii) the fact that the presence of old brackish water limits the determination of the water origin and dynamic. Methods: The water from tropical storms displays distinctively depleted heavy stable isotopes, in comparison with usual tropical rainfall without strong convective thunderstorms. During tropical storms, such as Hurricane Rafael in mid-October 2012, the rainfall delta18O signal can be decreased by many units. This effect is called an “isotopic spike”, and it could be used as a temporal marker of the water fluxes. Results: Water samples, with delta18O values as low as −8.9/1000, were collected on the islands of Guadeloupe and Saint-Martin during Hurricane Rafael, whereas the usual range of groundwater or mean rainfall delta18O values is around −2.8 +/- 0.5 /1000, as measured from 2009 to 2012. These water “isotopic spikes” allow us to show a surface freshwater uptake by mangrove trees in Guadeloupe, and in Saint-Martin, to calculate the water renewal of the salt ponds and pools. Conclusions: The “isotopic spikes” generated by tropical storms are generally used to track back past storm events, as recorded in trees and stalagmites. Here, the propagation of isotopic spike is followed to improve the understanding of the freshwater circulation and the water dynamic within coastal ecosystems influenced by seawater.
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Ruelle, J., Beauchene, J., Thibaut, A., & Thibaut, B. (2007). Comparison of physical and mechanical properties of tension and opposite wood from ten tropical rainforest trees from different species. Ann. For. Sci., 64(5), 503–510.
Abstract: On 10 trees from 10 species of French Guyana tropical rainforest in a clear active process of restoring verticality growth strains were measured in situ in order to determine the occurrence of tension wood within samples. Wood specimens were cut in the vicinity of the growth strains measurements in order to measure some mechanical and physical properties. As suspected, tensile growth strains was very much higher in tension wood zone, because longitudinal modulus of elasticity was slightly higher. Longitudinal shrinkage was also much higher in tension wood than in opposite wood.
Keywords: tension wood; opposite wood; tropical rainforest; physical and mechanical properties
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Ruelle, J., Yoshida, M., Clair, B., & Thibaut, B. (2007). Peculiar tension wood structure in Laetia procera (Poepp.) Eichl. (Flacourtiaceae). Trees-Struct. Funct., 21(3), 345–355.
Abstract: Tension wood of Laetia procera (Poepp.) Eichl. (Flacourtiaceae), a neo-tropical forest species, shows a peculiar secondary wall structure, with an alternance of thick and thin layers, while opposite wood of this species has a typical secondary wall structure (S1 + S2 + S3). Samples for the study of microstructural properties were collected upon the estimation of growth stresses in the living tree, in order to analyze the correlation of the former with the latter. Investigation using optical microscopy, scanning electron microscopy and UV microspectrophotometry allowed the description of the anatomy, ultra-structure and chemistry of this peculiar polylaminate secondary wall. In the thick layers, cellulose microfibril angle is very low (i.e., microfibril orientation is close to fibre axis) and cellulose microfibrils are well organized and parallel to each other. In the thin layers, microfibrils (only observable in the inner layer) are less organized and are oriented with a large angle relative to the axis of the cell. Thick layers are lightly lignified although thin layers show a higher content of lignin, close to that of opposite wood secondary wall. The more the wood was under tensile stress, the less the secondary wall was lignified, and lower the syringyl on guaiacyl lignin units' ratio was. The innermost layer of the secondary wall looks like a typical S3 layer with large microfibril angle and lignin occurrence. The interest of this kind of structure for the understanding of stress generation is discussed.
Keywords: tension wood; tropical rainforest species; UV microspectrophotometry; scanning electron microscopy; cellulose microfibril angle
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Schimann, H., Joffre, R., Roggy, J. C., Lensi, R., & Domenach, A. M. (2007). Evaluation of the recovery of microbial functions during soil restoration using near-infrared spectroscopy. Appl. Soil Ecol., 37(3), 223–232.
Abstract: Microbial-based indicators, such as C and N contents or microbial functions involved in C and N cycles, are currently used to describe the status of soils in disturbed areas. Microbial functions are more accurate indicators but their measurement for studies at the ecosystem level remains problematical because of the huge spatial variability of these processes and, consequently, of the large number of soil samples which must be analyzed. Our goal was to test the capacity of near-infrared reflectance spectroscopy (NIRS) to predict respiration and denitrification but also carbon and nitrogen contents of soils submitted to various procedures of restoration. To achieve this objective, we took advantage of an experiment conducted on a reforestation system established after open-cast gold mining in French Guiana. In this experimental station, plantations of various ages and various soil textures were at our disposal. Our results showed that both plantations and soil texture had a strong impact on the recovery of soil functioning: carbon and nitrogen contents, respiration and denitrification increased with age of plantation and clay content. Calibrations were performed between spectral data and microbial-based indicators using partial least squares regression (PLS). The results showed that C and N contents were accurately predicted. Microbial functions were less precisely predicted with results more accurate on clayey soils than on sandy soils. In clayey soils, perturbed or restored soils and the year of plantation were discriminated very efficiently through principal component analyses of spectral signatures (over 80% of variance explained on the first two axes). Near-infrared spectroscopy may thus be extended to the prediction of functional soil parameters, but the capacity of this method must be strengthened by expending the databases with other soils in other contexts. The possibility of using NIRS provides many opportunities for understanding both the temporal dynamics and the spatial variability of the recovery of key microbial functions during soil restoration. (c) 2007 Elsevier B.V. All rights reserved.
Keywords: NIRS; microbial activities; respiration; denitrification; carbon; nitrogen; soil functioning; restoration
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Bereau, M., Bonal, D., Louisanna, E., & Garbaye, J. (2005). Do mycorrhizas improve tropical tree seedling performance under water stress and low light conditions? A case study with Dicorynia guianensis (Caesalpiniaceae). J. Trop. Ecol., 21, 375–381.
Abstract: We tested the response of seedlings of Diconyina guianensis, a major timber tree species of French Guiana, to mycorrhizal symbiosis and water limitation in a semi-con trolled experiment under natural light conditions. Under well-watered conditions, mycorrhizal colonization resulted in an increase of net photosynthesis, growth and phosphorus uptake. When submitted to water stress, no growth reduction of mycorrhizal seedlings was observed. Mycorrhizal seedlings were more sensitive to drought than non-mycorrhizal ones in terms of carbon assimilation, but not with regard to stomatal closure. In contrast to previous studies on temperate tree seedlings, this result precludes a mycorrhizal effect on the hydraulic properties of this species. Furthermore, our results suggest that below a specific threshold of soil moisture, carbon assimilation of D. guianensis seedlings was decreased by the mycorrhizal symbiosis. This is probably related to the competition between the plant and its host fungus for carbon allocation under low light intensity, even though it did not seem to have a significant effect on mortality in our experiment.
Keywords: French Guiana; leaf gas exchange; mycorrhizal symbiosis; tropical forest; water limitation
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Nirma, C., Eparvier, V., & Stien, D. (2013). Antifungal agents from Pseudallescheria boydii SNB-CN73 isolated from a nasutitermes sp. termite. J. Nat. Prod., 76(5), 988–991.
Abstract: Defense mutualisms between social insects and microorganisms have been described in the literature. The present article describes the discovery of a Pseudallescheria boydii strain isolated from Nasutitermes sp. The microbial symbiont produces two antifungal metabolites: tyroscherin and N-methyltyroscherin, a compound not previously described in the literature. Methylation of tyroscherin has confirmed the structure of N-methyltyroscherin. Both compounds are effective antifungal agents with favorable selectivity indices for Candida albicans and Trichophyton rubrum. © 2013 The American Chemical Society and American Society of Pharmacognosy.
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Fromin, N., Saby, N. P. A., Lensi, R., Brunet, D., Porte, B., Domenach, A. - M., et al. (2013). Spatial variability of soil microbial functioning in a tropical rainforest of French Guiana using nested sampling. Geoderma, 197-198, 98–107.
Abstract: Understanding the pattern in spatial distribution of soil microbial processes is critical to understand the environmental factors that regulate them as well as to scale up these processes to ecosystem. Soil samples from a 1. ha tropical rainforest plot (Paracou, French Guiana) were analyzed according a nested sampling approach using different separation distances ranging from 0.4 to 40. m. The variability of substrate induced respiration (SIR) and of denitrification enzyme activity (DEA) was characterized in relation to various soil properties (total C and N contents, NIRS related index of soil organic matter quality, SOMQ, and index of tree influence potential, IP). The variability of SIR and DEA was higher than that of environmental properties. The patterns of accumulated variance as a function of distance varied among the soil properties. The variability of SIR and DEA mainly occurred at small (1. m) scale (and at the 10-40. m-scales for SIR), probably reflecting the quality of litter input that results of the influence of local assemblage of different tree species, though changes in the soil N and C contents. Indeed, total soil C and N contents explained the microbial properties at every scale. Coefficients of codispersion showed that neither SOMQ nor IP did correlate with SIR and DEA, and confirmed that total C and N contents explained microbial properties in a scale dependent and complex manner. Such spatial dependency underlines the importance of soil heterogeneity in this tropical forest with implications for sampling strategies when studying the microbial processes and their response to disturbances. © 2012 Elsevier B.V.
Keywords: Denitrification; Respiration; Scale dependent process; Soil microbial processes; Soil organic matter; Tree influence potential
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Fromin, N., Porte, B., Lensi, R., Hamelin, J., Domenach, A. - M., Buatois, B., et al. (2012). Spatial variability of the functional stability of microbial respiration process: A microcosm study using tropical forest soil. J. Soils Sed., 12(7), 1030–1039.
Abstract: Purpose: Understanding the ability of ecosystem processes to resist to and to recover from disturbances is critical to sustainable land use. However, the spatial variability of the stability has rarely been addressed. Here, we investigated the functional stability of a soil microbial process for 24 soils collected from adjacent locations from a 0. 3 ha tropical rainforest plot in Paracou, French Guiana. Materials and methods: The 24 locations were characterized regarding soil chemical and biological (microbial diversity) parameters and forest structure. The corresponding soils were submitted to an experimental transient heat disturbance during a microcosm experiment. The response of the respiration process was followed using substrate-induced respiration (SIR). Results and discussion: The response of soil SIR to heat disturbance varied widely between samples. The variability of the SIR response increased just after the disturbance, and a global rather homogeneous decrease in SIR rates was observed 15 and 30 days after. The stability of SIR in response to heat disturbance could not be related to either the genetic or the metabolic diversity of the microbial community. The initial level of SIR before the disturbance was the soil variable that best correlated with the impact of the disturbance: the soil locations with the highest initial SIR rates were the most affected 15 and 30 days after the heat disturbance. Conclusions: Such a heterogeneous response suggests that the response of soil processes to a disturbance will be difficult to assess from only local-scale analyses and highlights the need for spatial explicitness in understanding biogeochemical processes. © 2012 Springer-Verlag.
Keywords: Disturbance; Diversity-stability relationship; Microbial diversity; Substrate-induced respiration
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