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Author Bertani, S.; Houel, E.; Bourdy, G.; Stien, D.; Jullian, V.; Landau, I.; Deharo, E. openurl 
  Title Quassia amara L. (Simaroubaceae) leaf tea: Effect of the growing stage and desiccation status on the antimalarial activity of a traditional preparation Type Journal Article
  Year 2007 Publication Journal of Ethnopharmacology Abbreviated Journal J. Ethnopharmacol.  
  Volume 111 Issue 1 Pages 40-42  
  Keywords antimalarial; Quassia amara; quassinoids; simalikalactone D; traditional medicine  
  Abstract (down) In French Guiana, Quassia amara L. (Simaroubaceae) leaf tea is a well-known widely used traditional antimalarial remedy. Impact of the vegetal sampling condition on in vivo and in vitro antimalarial activity was assessed. Traditional infusions were prepared with juvenile or mature leaves, both either fresh or dried. Results showed that growing stage and freshness of vegetal material exert a striking effect on antimalarial activity, both in vitro and in vivo. By far, leaf tea made from fresh juvenile (FJ) Quassia amara leaves was the most active. In vitro, active component (simalikalactone D) concentration correlates biological activities, although unexplained subtle variations were observed. In vivo, tea made with dried juvenile (DJ) leaves displays a peculiar behavior, meaning that some components may help simalikalactone D delivery or may be active in vivo only, therefore enhancing the expected curative effect of the traditional preparation. (c) 2006 Elsevier Ireland Ltd. All rights reserved.  
  Address Univ Toulouse 3, Ctr IRD, UMR 152, IRD, F-97323 Cayenne Cx, Guyana, Email: eric.deharo@ird.fr  
  Corporate Author Thesis  
  Publisher ELSEVIER IRELAND LTD Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0378-8741 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000246059600007 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 164  
Permanent link to this record
 

 
Author Leroy, C.; Maes, A.Q.; Louisanna, E.; Séjalon-Delmas, N. url  doi
openurl 
  Title How significant are endophytic fungi in bromeliad seeds and seedlings? Effects on germination, survival and performance of two epiphytic plant species Type Journal Article
  Year 2019 Publication Fungal Ecology Abbreviated Journal Fungal Ecol.  
  Volume 39 Issue Pages 296-306  
  Keywords Aechmea; Bromeliads; Endophytic fungi; Fusarium spp.; Germination; Survival; Trichoderma spp.; Vertical transmission  
  Abstract (down) In bromeliads, nothing is known about the associations fungi form with seeds and seedling roots. We investigated whether fungal associations occur in the seeds and seedling roots of two epiphytic Aechmea species, and we explored whether substrate and fungal associations contribute to seed germination, and seedling survival and performance after the first month of growth. We found a total of 21 genera and 77 species of endophytic fungi in the seeds and seedlings for both Aechmea species by Illumina MiSeq sequencing. The fungal associations in seeds were found in the majority of corresponding seedlings, suggesting that fungi are transmitted vertically. Substrate quality modulated the germination and growth of seedlings, and beneficial endophytic fungi were not particularly crucial for germination but contributed positively to survival and growth. Overall, this study provides the first evidence of an endophytic fungal community in both the seeds and seedlings of two epiphytic bromeliads species that subsequently benefit plant growth. © 2019 Elsevier Ltd and British Mycological Society  
  Address INRA, UMR Ecologie des Forêts de Guyane (AgroParisTech, CIRAD, CNRS, INRA, Université de Guyane, Université des Antilles), Campus Agronomique, BP 316, Kourou cedex, F-97379, France  
  Corporate Author Thesis  
  Publisher Elsevier Ltd Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 17545048 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 867  
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Author Cochard, H.; Coste, S.; Chanson, B.; Guehl, J.M.; Nicolini, E. openurl 
  Title Hydraulic architecture correlates with bud organogenesis and primary shoot growth in beech (Fagus sylvatica) Type Journal Article
  Year 2005 Publication Tree Physiology Abbreviated Journal Tree Physiol.  
  Volume 25 Issue 12 Pages 1545-1552  
  Keywords development; hydraulic conductance; leaf primordia; meristem; xylem  
  Abstract (down) In beech (Fagus sylvatica L.), the number of leaf primordia preformed in the buds determines the length and the type (long versus short) of annual growth units, and thus, branch growth and architecture. We analyzed the correlation between the number of leaf primordia and the hydraulic conductance of the vascular system connected to the buds. Terminal buds of short growth units and axillary buds of long growth units on lower branches of mature trees were examined. Buds with less than four and more than five leaf primordia formed short and long growth units, respectively. Irrespective of the type of growth unit the bud was formed on, the occurrence of a large number of leaf primordia was associated with high xylem hydraulic conductance. Xylem conductance was correlated to the area of the outermost annual ring. These results suggest that organogenesis and primary growth in buds correlates with secondary growth of the growth units and thus with their hydraulic architecture. Possible causal relationships between the variables are discussed.  
  Address INRA UBP, UMR PIAF, F-63039 Clermont Ferrand, France, Email: cochard@clermont.inra.fr  
  Corporate Author Thesis  
  Publisher HERON PUBLISHING Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0829-318X ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000234019900008 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 281  
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Author Dejean, A.; Compin, A.; Leponce, M.; Azémar, F.; Bonhomme, C.; Talaga, S.; Pelozuelo, L.; Hénaut, Y.; Corbara, B. url  doi
openurl 
  Title Ants impact the composition of the aquatic macroinvertebrate communities of a myrmecophytic tank bromeliad Type Journal Article
  Year 2018 Publication Comptes Rendus Biologies Abbreviated Journal  
  Volume 341 Issue 3 Pages 200-207  
  Keywords Aquatic macroinvertebrates; Ant-plant relationships; Diversity; Food webs; Tank bromeliads; Macro-invertébrés aquatiques; Relations plantes-fourmis; Diversité; Réseaux trophiques; Broméliacées à réservoirs  
  Abstract (down) In an inundated Mexican forest, 89 out of 92 myrmecophytic tank bromeliads (Aechmea bracteata) housed an associated ant colony: 13 sheltered Azteca serica, 43 Dolichoderus bispinosus, and 33 Neoponera villosa. Ant presence has a positive impact on the diversity of the aquatic macroinvertebrate communities (n=30 bromeliads studied). A Principal Component Analysis (PCA) showed that the presence and the species of ant are not correlated to bromeliad size, quantity of water, number of wells, filtered organic matter or incident radiation. The PCA and a generalized linear model showed that the presence of Azteca serica differed from the presence of the other two ant species or no ants in its effects on the aquatic invertebrate community (more predators). Therefore, both ant presence and species of ant affect the composition of the aquatic macroinvertebrate communities in the tanks of A. bracteata, likely due to ant deposition of feces and other waste in these tanks. Résumé Dans une forêt inondable du Mexique, sur 92 individus de la broméliacée myrmécophyte Aechmea bracteata, seuls trois étaient dépourvus d’une colonie de fourmis, 13 abritaient Azteca serica, 43 Dolichoderus bispinosus et 33 Neoponera villosa. La présence des fourmis favorise la diversité au sein des communautés aquatiques de macro-invertébrés (30 broméliacées étudiées, index de Shannon, profils de diversité). Une analyse en composantes principales (ACP) montre que la présence de fourmis n’est pas corrélée avec la taille de la plante, la quantité d’eau, le nombre de puits, la quantité de matière organique et la radiation incidente. L’ACP et un modèle mixte généralisé montrent un impact d’Azteca serica (comparé aux autres cas) attribuable à une plus grande quantité de prédateurs (effet top–down). La présence et l’identité des fourmis jouent un rôle sur la composition des communautés de macro-invertébrés aquatiques à travers des interactions directes, les ouvrières évacuant fèces et déchets dans les réservoirs.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1631-0691 ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 821  
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Author Marti, G.; Eparvier, V.; Moretti, C.; Prado, S.; Grellier, P.; Hue, N.; Thoison, O.; Delpech, B.; Gueritte, F.; Litaudon, M. openurl 
  Title Antiplasmodial benzophenone derivatives from the root barks of Symphonia globulifera (Clusiaceae) Type Journal Article
  Year 2010 Publication Phytochemistry Abbreviated Journal Phytochemistry  
  Volume 71 Issue 8-9 Pages 964-974  
  Keywords Symphonia globulifera; Clusiaceae; Benzophenone; Symphonone; Antiplasmodial; LC/ESI-MS  
  Abstract (down) In an effort to find antimalarial drugs, a systematic in vitro evaluation on a chloroquine-resistant strain of Plasmodium falciparum (FcB1) was undertaken on sixty plant extracts collected in French Guiana. The ethyl acetate extract obtained from the root barks of Symphonia globulifera exhibited a strong antiplasmodial activity (97% at 10 μg/ml). The phytochemical investigation of this extract led to the isolation of nine polycyclic polyprenylated acylphloroglucinol (PPAPs) compounds and two oxidized derivatives. All compounds showed antiplasmodial activity with IC(50)s ranged from 2.1 to 10.1 μM. A LC/ESI-MSn study performed on polyprenylated benzophenones previously isolated from Moronobea coccinea provided a reliable method for their detection in the extract and structural elucidation. (C) 2010 Elsevier Ltd. All rights reserved.  
  Address [Marti, Guillaume; Hue, Nathalie; Thoison, Odile; Delpech, Bernard; Gueritte, Francoise; Litaudon, Marc] CNRS, Inst Chim Subst Nat, Ctr Rech Gif, F-91198 Gif Sur Yvette, France, Email: marc.litaudon@icsn.cnrs-gif.fr  
  Corporate Author Thesis  
  Publisher PERGAMON-ELSEVIER SCIENCE LTD Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0031-9422 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000279077400016 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 284  
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Author Jaouen, G.; Sagne, A.; Buyck, B.; Decock, C.; Louisanna, E.; Manzi, S.; Baraloto, C.; Roy, M.; Schimann, H. pdf  url
doi  openurl
  Title Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset Type Journal Article
  Year 2019 Publication Scientific data Abbreviated Journal  
  Volume 6 Issue 206 Pages  
  Keywords  
  Abstract (down) In Amazonia, the knowledge about Fungi remains patchy and biased towards accessible sites. This is particularly the case in French Guiana where the existing collections have been confined to few coastal localities. Here, we aimed at filling the gaps of knowledge in undersampled areas of this region, particularly focusing on the Basidiomycota. From 2011, we comprehensively collected fruiting-bodies with a stratified and reproducible sampling scheme in 126 plots. Sites of sampling reflected the main forest habitats of French Guiana in terms of soil fertility and topography. The dataset of 5219 specimens gathers 245 genera belonging to 75 families, 642 specimens are barcoded. The dataset is not a checklist as only 27% of the specimens are identified at the species level but 96% are identified at the genus level. We found an extraordinary diversity distributed across forest habitats. The dataset is an unprecedented and original collection of Basidiomycota for the region, making specimens available for taxonomists and ecologists. The database is publicly available in the GBIF repository ( https://doi.org/10.15468/ymvlrp ).  
  Address Department of Biological Science, Florida International University, FL, Miami, 33199, United States  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 28 October 2019 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 891  
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Author Leroy, C.; Sabatier, S.; Wahyuni, N.S.; Barczi, J.F.; Dauzat, J.; Laurans, M.; Auclair, D. openurl 
  Title Virtual trees and light capture: a method for optimizing agroforestry stand design Type Journal Article
  Year 2009 Publication Agroforestry Systems Abbreviated Journal Agrofor. Syst.  
  Volume 77 Issue 1 Pages 37-47  
  Keywords Acacia mangium; Tectona grandis; Agroforestry; Light interception; Plant architecture; Simulation; 3D virtual plant  
  Abstract (down) In agroforestry systems, the distribution of light transmitted under tree canopies can be a limiting factor for the development of intercrops. The light available for intercrops depends on the quantity of light intercepted by tree canopies and, consequently, on the architecture of the tree species present. The influence of tree architecture on light transmission was analysed using dynamic 3D architectural models. The architectural analysis of Acacia mangium and Tectona grandis was performed in Indonesian agroforestry systems with trees aged from 1 to 3 years. 3D virtual trees were then generated with the AmapSim simulation software and 3D virtual experiments in which tree age, planting density, planting pattern and pruning intensity varied were reconstructed in order to simulate light available for the crop. Canopy closure of trees was more rapid in A. mangium than in T. grandis agroforestry systems; after 3 years the quantity of light available for A. mangium intercrops was three times lower than under T. grandis. Simulations with A. mangium showed that practices such as pruning and widening tree spacing enable to increase the total transmitted light within the stand. On T. grandis, modification of the tree row azimuth resulted in changes in the spatial and seasonal distribution of light available for the intercrops. These results are discussed in terms of agroforestry system management.  
  Address [Sabatier, Sylvie; Barczi, Jean-Francois; Dauzat, Jean; Laurans, Marilyne] CIRAD, UMR AMAP Botan & Bioinformat Architecture Plantes, F-34398 Montpellier 5, France, Email: sylvie-annabel.sabatier@cirad.fr  
  Corporate Author Thesis  
  Publisher SPRINGER Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0167-4366 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000268865600004 Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 199  
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Author Devault, D.A.; Beilvert, B.; Winterton, P. url  doi
openurl 
  Title Ship breaking or scuttling? A review of environmental, economic and forensic issues for decision support Type Journal Article
  Year 2017 Publication Environmental Science and Pollution Research Abbreviated Journal Environ. Sci. Pollut. Res.  
  Volume 24 Issue 33 Pages 25741-25774  
  Keywords Artificial reef; Diving; Ship recycling; Ship Recycling Facilities; Shipbreaking; Tourism; Working conditions; Wrecks; artificial reef; coastal erosion; coastal zone management; cost-benefit analysis; decision support system; developing world; economic impact; environmental economics; environmental impact assessment; environmental issue; facility location; health and safety; invasive species; profitability; recycling; shipping; tourism; working conditions; wreck; analysis; decision support system; economics; international cooperation; pollution; prevention and control; procedures; recycling; ship; statistics and numerical data; Decision Support Techniques; Environmental Pollution; Internationality; Recycling; Ships  
  Abstract (down) In a globalized world, the world trade fleet plays a pivotal role in limiting transport costs. But, the management of obsolete ships is an acute problem, with most Ship Recycling Facilities (SRF) situated in developing countries. They are renowned for their controversial work and safety conditions and their environmental impact. Paradoxically, dismantlement is paid for by the shipowners in accordance with international conventions therefore it is more profitable for them to sell off ships destined for scrapping. Scuttling, the alternative to scrapping, is assessed in the present review to compare the cost/benefit ratios of the two approaches. Although scrapping provides employment and raw materials – but with environmental, health and safety costs – scuttling provides fisheries and diving tourism opportunities but needs appropriate management to avoid organic and metal pollution, introduction of invasive species and exacerbation of coastal erosion. It is also limited by appropriate bottom depth, ship type and number. The present review inventories the environmental, health, safety, economic, and forensic aspects of each alternative. © 2016, Springer-Verlag Berlin Heidelberg.  
  Address Département Langues et Gestion, Université Toulouse III – Paul Sabatier, 118 route de Narbonne, Toulouse cedex 09, 31062, France  
  Corporate Author Thesis  
  Publisher Springer Verlag Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 09441344 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 869  
Permanent link to this record
 

 
Author Buckland, S.T.; Yuan, Y.; Marcon, E. pdf  url
doi  openurl
  Title Measuring temporal trends in biodiversity Type Journal Article
  Year 2017 Publication AStA Advances in Statistical Analysis Abbreviated Journal AStA Advances in Statistical Analysis  
  Volume 101 Issue 4 Pages 461-474  
  Keywords Biodiversity measures; Diversity profiles; Geometric mean; Species similarity; Turnover measures  
  Abstract (down) In 2002, nearly 200 nations signed up to the 2010 target of the Convention for Biological Diversity, ‘to significantly reduce the rate of biodiversity loss by 2010’. To assess whether the target was met, it became necessary to quantify temporal trends in measures of diversity. This resulted in a marked shift in focus for biodiversity measurement. We explore the developments in measuring biodiversity that was prompted by the 2010 target. We consider measures based on species proportions, and also explain why a geometric mean of relative abundance estimates was preferred to such measures for assessing progress towards the target. We look at the use of diversity profiles, and consider how species similarity can be incorporated into diversity measures. We also discuss measures of turnover that can be used to quantify shifts in community composition arising, for example, from climate change. © 2017, The Author(s).  
  Address UMR EcoFoG, AgroParisTech, Campus Agronomique, BP 316, Kourou, French Guiana, France  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Cited By :1; Export Date: 2 November 2017 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 769  
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Author Devault, D.A.; Lévi, Y.; Karolak, S. url  doi
openurl 
  Title Applying sewage epidemiology approach to estimate illicit drug consumption in a tropical context: Bias related to sewage temperature and pH Type Journal Article
  Year 2017 Publication Science of the Total Environment Abbreviated Journal Science of the Total Environment  
  Volume 584-585 Issue Pages 252-258  
  Keywords Cannabis; Degradation; H2s; Half-life; Illicit drugs; Wastewater  
  Abstract (down) Illicit drug consumption can be estimated from drug target residue (DTR) in wastewater, with the reliability of results being partly linked to DTR stability in the sewage network. However, wastewater temperature and pH drive the stability of molecules and, in this context, tropical conditions must be studied to specify the impact of residence time in the sewage network on DTR degradation. Warmth enhances biotic and abiotic processes such as degradation, leading to a decrease in oxygen content, and consequently, early diagenesis conditions in wastewater. In this study, we conduct laboratory studies under acidic pH and high temperature (30 °C) conditions to determine the degradation half-lives of cocaine (COC), tetrahydrocannabinol, and heroine targets, allowing COC/benzoylecgonine (BZE) ratio variations to be predicted in sewage networks. A rapid COC degradation is observed, as already reported in the literature but without a short-term significant difference between 20 °C and 30 °C. Acidic pH seems to prevent degradation. Thus, theoretically, the use of COC as DTR is only reliable in acidic conditions, with the decrease in COC concentration being 6% at 8 h, but over 40% in other conditions. By contrast, the use of BZE as DTR to estimate COC consumption, which is performed in practice, can be undertaken with the same back-calculation equation as used in temperate countries. However, 11-nor-delta-9-carboxytetrahydrocannabinol stability is more influenced by high temperature: concentration levels after 24 h are 20% lower at 30 °C than at 20 °C, corresponding to a 20% and 40% decrease, respectively. Based on a mean residence time of 8 h, underestimated cannabis consumption is close to 15% in tropical contexts, which is double that of temperate areas. © 2017 Elsevier B.V.  
  Address Public Health and Environnement Laboratory, UMR 8079 Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 8 March 2017 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 741  
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