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Author Orivel, J.; Lambs, L.; Male, P.J.G.; Leroy, C.; Grangier, J.; Otto, T.; Quilichini, A.; Dejean, A. openurl 
  Title Dynamics of the association between a long-lived understory myrmecophyte and its specific associated ants Type Journal Article
  Year 2011 Publication Oecologia Abbreviated Journal Oecologia  
  Volume 165 Issue 2 Pages 369-376  
  Keywords Allomerus decemarticulatus; Hirtella physophora; Lifespan; Mutualism; Myrmecophyte  
  Abstract (up) Myrmecophytic symbioses are widespread in tropical ecosystems and their diversity makes them useful tools for understanding the origin and evolution of mutualisms. Obligate ant-plants, or myrmecophytes, provide a nesting place, and, often, food to a limited number of plant-ant species. In exchange, plant-ants protect their host plants from herbivores, competitors and pathogens, and can provide them with nutrients. Although most studies to date have highlighted a similar global pattern of interactions in these systems, little is known about the temporal structuring and dynamics of most of these associations. In this study we focused on the association between the understory myrmecophyte Hirtella physophora (Chrysobalanaceae) and its obligate ant partner Allomerus decemarticulatus (Myrmicinae). An examination of the life histories and growth rates of both partners demonstrated that this plant species has a much longer lifespan (up to about 350 years) than its associated ant colonies (up to about 21 years). The size of the ant colonies and their reproductive success were strongly limited by the available nesting space provided by the host plants. Moreover, the resident ants positively affected the vegetative growth of their host plant, but had a negative effect on its reproduction by reducing the number of flowers and fruits by more than 50%. Altogether our results are important to understanding the evolutionary dynamics of ant-plant symbioses. The highly specialized interaction between long-lived plants and ants with a shorter lifespan produces an asymmetry in the evolutionary rates of the interaction which, in return, can affect the degree to which the interests of the two partners converge.  
  Address [Orivel, Jerome; Leroy, Celine; Quilichini, Angelique; Dejean, Alain] CNRS, UMR Ecol Forets Guyane, F-97379 Kourou, France, Email: jerome.orivel@ecofog.gf  
  Corporate Author Thesis  
  Publisher Springer Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0029-8549 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000286224900012 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 295  
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Author Malé, P.-J.G.; Leroy, C.; Lusignan, L.; Petitclerc, F.; Quilichini, A.; Orivel, J. doi  openurl
  Title The reproductive biology of the myrmecophyte, Hirtella physophora, and the limitation of negative interactions between pollinators and ants Type Journal Article
  Year 2015 Publication Arthropod-Plant Interactions Abbreviated Journal Arthropod-Plant Interactions  
  Volume 9 Issue 1 Pages 23-31  
  Keywords Ant-plant; Ant–pollinator interactions; Floral structure and display; Plant reproductive biology; Spatial and temporal segregation  
  Abstract (up) Myrmecophytism occurs in plants that offer ants a nesting space and, often, food rewards in exchange for protection from predators and competitors. Such biotic protection by ants can, however, interfere with the activity of pollinators leading to potential negative consequences for the plant’s reproduction. In this study, we focused on the association between the understory myrmecophyte, Hirtella physophora (Chrysobalanaceae), and its obligate ant partner, Allomerus decemarticulatus (Myrmicinae). We investigated the reproductive biology of H. physophora and the putative mechanisms that may limit ant–pollinator conflict. Our results show that H. physophora is an obligate outcrosser, self-incompatible, and potentially insect-pollinated species. The reproduction of H. physophora relies entirely on pollen transfer by pollinators that are likely quite specific. Potential interference between flower-visiting insects during pollination may also be lessened by a spatial and temporal segregation of ant and pollinator activities, thus enabling pollen transfer and fruit production. © 2014, Springer Science+Business Media Dordrecht.  
  Address IRD, UMR AMAP (botAnique et bioinforMatique de l’Architecture des Plantes), Boulevard de la Lironde, TA A-51/PS2Montpellier Cedex 5, France  
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  Notes Export Date: 9 April 2015 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 593  
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Author Goulamoussene, Y.; Bedeau, C.; Descroix, L.; Linguet, L.; Herault, B. pdf  url
doi  openurl
  Title Environmental control of natural gap size distribution in tropical forests Type Journal Article
  Year 2017 Publication Biogeosciences Abbreviated Journal Biogeosciences  
  Volume 14 Issue 2 Pages 353-364  
  Keywords  
  Abstract (up) Natural disturbances are the dominant form of forest regeneration and dynamics in unmanaged tropical forests. Monitoring the size distribution of treefall gaps is important to better understand and predict the carbon budget in response to land use and other global changes. In this study, we model the size frequency distribution of natural canopy gaps with a discrete power law distribution. We use a Bayesian framework to introduce and test, using Monte Carlo Markov chain and Kuo-Mallick algorithms, the effect of local physical environment on gap size distribution. We apply our methodological framework to an original light detecting and ranging dataset in which natural forest gaps were delineated over 30 000 ha of unmanaged forest. We highlight strong links between gap size distribution and environment, primarily hydrological conditions and topography, with large gaps being more frequent on floodplains and in wind-exposed areas. In the future, we plan to apply our methodological framework on a larger scale using satellite data. Additionally, although gap size distribution variation is clearly under environmental control, variation in gap size distribution in time should be tested against climate variability. © Author(s) 2017.  
  Address Cirad, UMR EcoFoG, AgroParisTech, CNRS, Inra, Univ Antilles, Univ Guyane, Kourou, French Guiana  
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  Notes Export Date: 7 February 2017 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 729  
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Author Falkowski, M.; Jahn-Oyac, A.; Odonne, G.; Flora, C.; Estevez, Y.; Touré, S.; Boulogne, I.; Robinson, J.-C.; Béreau, D.; Petit, P.; Azam, D.; Coke, M.; Issaly, J.; Gaborit, P.; Stien, D.; Eparvier, V.; Dusfour, I.; Houël, E. url  doi
openurl 
  Title Towards the optimization of botanical insecticides research: Aedes aegypti larvicidal natural products in French Guiana Type Journal Article
  Year 2020 Publication Acta Tropica Abbreviated Journal  
  Volume 201 Issue 105179 Pages  
  Keywords Amazonian chemodiversity; Chemical defense; Culicidae; Mosquito larvicides; Quasi-Poisson generalized linear model; Screening optimization  
  Abstract (up) Natural products have proven to be an immeasurable source of bioactive compounds. The exceptional biodiversity encountered in Amazonia, alongside a rich entomofauna and frequent interactions with various herbivores is the crucible of a promising chemodiversity. This prompted us to search for novel botanical insecticides in French Guiana. As this French overseas department faces severe issues linked to insects, notably the strong incidence of vector-borne infectious diseases, we decided to focus our research on products able to control the mosquito Aedes aegypti. We tested 452 extracts obtained from 85 species originating from 36 botanical families and collected in contrasted environments against an Ae. aegypti laboratory strain susceptible to all insecticides, and a natural population resistant to both pyrethroid and organophosphate insecticides collected in Cayenne for the most active of them. Eight species (Maytenus oblongata Reissek, Celastraceae; Costus erythrothyrsus Loes., Costaceae; Humiria balsamifera Aubl., Humiriaceae; Sextonia rubra (Mez) van der Werff, Lauraceae; Piper hispidum Sw., Piperaceae; Laetia procera (Poepp.) Eichl., Salicaceae; Matayba arborescens (Aubl.) Radlk., Sapindaceae; and Cupania scrobitulata Rich., Sapindaceae) led to extracts exhibiting more than 50% larval mortality after 48 h of exposition at 100 µg/mL against the natural population and were considered active. Selectivity and phytochemistry of these extracts were therefore investigated and discussed, and some active compounds highlighted. Multivariate analysis highlighted that solvents, plant tissues, plant family and location had a significant effect on mortality while light, available resources and vegetation type did not. Through this case study we highlighted that plant defensive chemistry mechanisms are crucial while searching for novel insecticidal products.  
  Address INRS-Institut Armand Frappier, Groupe recherche en écologie microbienne, 531 boulevard des prairies, Laval, QC H7V 1B7, Canada  
  Corporate Author Thesis  
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  Notes Approved no  
  Call Number EcoFoG @ webmaster @ Serial 888  
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Author Niamké, F.B.; Amusant, N.; Kadio, A.A.; Thevenon, M.-F.; Nourissier, S.; Adima, A.A.; Jay-Allemand, C.; Chaix, G. url  openurl
  Title Rapid prediction of phenolic compounds as chemical markers for the natural durability of teak (Tectona grandis Linn f.) heartwood by near infrared spectroscopy Type Journal Article
  Year 2014 Publication Journal of Near Infrared Spectroscopy Abbreviated Journal J. Near Infrared Spectrosc.  
  Volume 22 Issue 1 Pages 35-43  
  Keywords Heartwood; Hplc; Natural durability; NIR spectroscopy; Phenolic; Prediction; Quinone; Tectona grandis  
  Abstract (up) Near infrared (NIR) spectroscopy provides rapid and non-destructive analysis of wood properties and composition. In this study, we aimed to use NIR measurement for the prediction of teak phenolic compounds, which are chemical markers for natural durability of wood. Twenty-seven teak trees from two geographical zones (Malaysia and Ivory Coast) were used. On ground heartwood samples, the content of total phenolics and individual quinones (tectoquinone, 2-(hydroxymethyl)anthraquinone, 2-anthraquinone carboxylic acid, 1,4-naphthoquinoneand 4c,5c-dihydroxy-epiisocatalponol) were determined using high performance liquid chromatography (HPLC). Partial least squares (PLS) regression with NIR spectra on the same samples and phenolic data was used to build NIR models for phenolic contents. The PLS models for the total predicted phenolics and three quinone contents (tectoquinone, 2-(hydroxymethyl) anthraquinone, and 4¢,5¢-dihydroxy-epiisocatalponol) showed a good ratio of performance to deviation (RPD ≥ 2.5), strong coefficients of determination (r2 ≥ 0.8) and the prediction errors were consistent with the reference method. These results demonstrate that NIR spectroscopy can be reliable for the evaluation of total phenolics and individual quinones in teak heartwood wood meal. NIR spectroscopy is a promising technique for rapidly providing information on the quinone contents in teak wood and indirectly for knowing its natural durability. This finding leads to a precise, non-destructive tool for teak wood quality evaluation. © IM Publications LLP 2014.  
  Address CIRAD-UMR AGAP, Department of Forest Science, ESALQ / University of São Paulo, Avenue Pàdua Dias 11, CEP 13418-900, Piracicaba-SP, Brazil  
  Corporate Author Thesis  
  Publisher N I R Publications Place of Publication Editor  
  Language Summary Language Original Title  
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  Series Volume Series Issue Edition  
  ISSN 17516552 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 20 May 2014; Source: Scopus; Language of Original Document: English; Correspondence Address: Niamké, F.B.; LAPISEN, Groupe de Recherche en Chimie des Eaux et des Substances Naturelles, Institut National Polytechnique Houphouët Boigny, BP 1313, Yamoussoukro, Cote d'Ivoire Approved no  
  Call Number EcoFoG @ webmaster @ Serial 542  
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Author Paine, C.E.T.; Norden, N.; Chave, J.; Forget, P.-M.; Fortunel, C.; Dexter, K.G.; Baraloto, C. url  openurl
  Title Phylogenetic density dependence and environmental filtering predict seedling mortality in a tropical forest Type Journal Article
  Year 2012 Publication Ecology Letters Abbreviated Journal Ecol. Lett.  
  Volume 15 Issue 1 Pages 34-41  
  Keywords Community assembly; Density dependence; French Guiana; Generalised linear mixed models; Janzen-Connell hypothesis; Seedling recruitment; Species coexistence; Survival  
  Abstract (up) Negative density dependence (NDD) and environmental filtering (EF) shape community assembly, but their relative importance is poorly understood. Recent studies have shown that seedling's mortality risk is positively related to the phylogenetic relatedness of neighbours. However, natural enemies, whose depredations often cause NDD, respond to functional traits of hosts rather than phylogenetic relatedness per se. To understand the roles of NDD and EF in community assembly, we assessed the effects on seedling mortality of functional similarity, phylogenetic relatedness and stem density of neighbouring seedlings and adults in a species-rich tropical forest. Mortality risks increased for common species when their functional traits departed substantially from the neighbourhood mean, and for all species when surrounded by close relatives. This indicates that NDD affects community assembly more broadly than does EF, and leads to the tentative conclusion that natural enemies respond to phylogenetically correlated traits. Our results affirm the prominence of NDD in structuring species-rich communities. © 2011 Blackwell Publishing Ltd/CNRS.  
  Address Department of Biology, University of Florida, Gainesville, FL 32611, United States  
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  ISSN 1461023x (Issn) ISBN Medium  
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  Notes Export Date: 13 December 2011; Source: Scopus; Coden: Eclef; doi: 10.1111/j.1461-0248.2011.01705.x; Language of Original Document: English; Correspondence Address: Paine, C.E.T.; Institut für Evolutionsbiologie und Umweltwissenschaften, Universität Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland; email: timothy.paine@ieu.uzh.ch Approved no  
  Call Number EcoFoG @ webmaster @ Serial 373  
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Author Paine, C.E.T.; Baraloto, C.; Chave, J.; Herault, B. openurl 
  Title Functional traits of individual trees reveal ecological constraints on community assembly in tropical rain forests Type Journal Article
  Year 2011 Publication Oikos Abbreviated Journal Oikos  
  Volume 120 Issue 5 Pages 720-727  
  Keywords  
  Abstract (up) Niche differentiation and ecological filtering are primary ecological processes that shape community assembly, but their relative importance remains poorly understood. Analyses of the distributions of functional traits can provide insight into the community structure generated by these processes. We predicted the trait distributions expected under the ecological processes of niche differentiation and environmental filtering, then tested these predictions with a dataset of 4672 trees located in nine 1-ha plots of tropical rain forest in French Guiana. Five traits related to leaf function (foliar N concentration, chlorophyll content, toughness, tissue density and specific leaf area), and three traits related to stem function (trunk sapwood density, branch sapwood density, and trunk bark thickness), as well as laminar surface area, were measured on every individual tree. There was far more evidence for environmental filtering than for niche differentiation in these forests. Furthermore, we contrasted results from species-mean and individual-level trait values. Analyses that took within-species trait variation into account were far more sensitive indicators of niche differentiation and ecological filtering. Species-mean analyses, by contrast, may underestimate the effects of ecological processes on community assembly. Environmental filtering appeared somewhat more intense on leaf traits than on stem traits, whereas niche differentiation affected neither strongly. By accounting for within-species trait variation, we were able to more properly consider the ecological interactions among individual trees and between individual trees and their environment. In so doing, our results suggest that the ecological processes of niche differentiation and environmental filtering may be more pervasive than previously believed.  
  Address [Paine, C. E. Timothy] ENGREF, UMR Ecol Forets Guyane, Kourou 97387, French Guiana, Email: timothy.paine@ieu.uzh.ch  
  Corporate Author Thesis  
  Publisher Wiley-Blackwell Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0030-1299 ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000289740200008 Approved no  
  Call Number EcoFoG @ webmaster @ Serial 313  
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Author Laurans, M.; Martin, O.; Nicolini, E.; Vincent, G. url  openurl
  Title Functional traits and their plasticity predict tropical trees regeneration niche even among species with intermediate light requirements Type Journal Article
  Year 2012 Publication Journal of Ecology Abbreviated Journal J. Ecol.  
  Volume 100 Issue 6 Pages 1440-1452  
  Keywords Canopy disturbance; Determinants of plant community diversity and structure; Growth rate; Irradiance; Leaf life span; Leaf mass per area; Niche differentiation; Phenotypic plasticity; Shade tolerance; Tropical moist forest  
  Abstract (up) Niche differentiation is a key issue in the current debate on community assembly mechanisms. In highly diverse moist tropical forests, tree species sensitivity to canopy openness is thought to be a major axis in niche differentiation. In the past, the syndrome of traits driving the demographic trade-off involved in the niche-based theory of coexistence has always been established among species situated at the two extremities of the shade-tolerance gradient, even though most tropical tree species have intermediate light requirements. In addition, trait plasticity has seldom been linked to tropical tree species distribution along environmental gradients. This article examines covariations between leaf traits, whole-plant traits and niche parameters among 14 tree species with intermediate light requirements in French Guiana and across a range of canopy openness. Each functional trait measured under field conditions was characterized by a median value and a degree of plasticity expressed under contrasting light regimes. Niche differentiation was characterized in terms of spatial light gradient. We first examined covariations between functional traits then explored to what degree the median value and plasticity in functional traits could predict light niche characteristics at the sapling stage and the ontogenetic change in light availability estimated by adult stature. Leaf mass per area (LMA) was positively correlated with leaf life span (LLS); species with higher LMA and higher LLS displayed lower diameter growth rates (GRs) and lower responsiveness to canopy gap at both whole-plant and population levels. This proved that the relationships previously established over a broader range of species held true within the narrow range of the light requirements covered. Height GR plasticity accounted for 49% of the variation in light niche optimum. LMA plasticity, unlike LLS plasticity, was significantly correlated with light niche breadth and adult stature. Synthesis. This study demonstrates the relevance of considering the phenotypic plasticity in functional traits in community ecology, particularly for quantifying breadth of species distribution over environmental gradients. Our findings did not support Hubbell's hypothesis of functional equivalence and suggest that even a rather subtle variation in forest canopy disturbance promotes the coexistence of tropical tree species. © 2012 The Authors. Journal of Ecology © 2012 British Ecological Society.  
  Address UMR AMAP, IRD, TA A-51/PS2, Bd de la Lironde, France  
  Corporate Author Thesis  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 00220477 (Issn) ISBN Medium  
  Area Expedition Conference  
  Notes Export Date: 7 November 2012; Source: Scopus; Coden: Jecoa; doi: 10.1111/j.1365-2745.2012.02007.x; Language of Original Document: English; Correspondence Address: Laurans, M.; UMR, AMAP, CIRAD TA A-51/PS1, Bd de la Lironde, 34398 Montpellier Cedex 5, France; email: laurans@cirad.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 445  
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Author Baraloto, C.; Hardy, O.J.; Paine, C.E.T.; Dexter, K.G.; Cruaud, C.; Dunning, L.T.; Gonzalez, M.-A.; Molino, J.-F.; Sabatier, D.; Savolainen, V.; Chave, J. url  openurl
  Title Using functional traits and phylogenetic trees to examine the assembly of tropical tree communities Type Journal Article
  Year 2012 Publication Journal of Ecology Abbreviated Journal J. Ecol.  
  Volume 100 Issue 3 Pages 690-701  
  Keywords Competition; Determinants of plant community diversity and structure; Environmental filtering; French Guiana; Functional traits; Limiting similarity; Niche; Phylogenetic signal; Tropical forests  
  Abstract (up) Niche theory proposes that species differences underlie both coexistence within communities and the differentiation in species composition among communities via limiting similarity and environmental filtering. However, it has been difficult to extend niche theory to species-rich communities because of the empirical challenge of quantifying niches for many species. This has motivated the development of functional and phylogeny-based approaches in community ecology, which represent two different means of approximating niche attributes. Here, we assess the utility of plant functional traits and phylogenetic relationships in predicting community assembly processes using the largest trait and phylogenetic data base to date for any set of species-rich communities. We measured 17 functional traits for all 4672 individuals of 668 tree species co-occurring in nine tropical rain forest plots in French Guiana. Trait variation was summarized into two ordination axes that reflect species niche overlap. We also generated a dated molecular phylogenetic tree based on DNA sequencing of two plastid loci (rbcL and matK) comprising 97% of the individuals and 91% of the species in the plots. We found that, on average, co-occurring species had greater functional and, to a lesser extent, phylogenetic similarity than expected by chance. We also found that functional traits and their ordination loadings showed significant, albeit weak, phylogenetic signal, suggesting that phylogenetic distance provides pertinent information on niche overlap in tropical tree communities. Synthesis. We provide the most comprehensive examination to date of the relative importance of environmental filtering and limiting similarity in structuring tropical tree communities. Our results confirm that environmental filtering is the overriding influence on community assembly in these species-rich systems. © 2012 The Authors. Journal of Ecology © 2012 British Ecological Society.  
  Address Royal Botanic Gardens, Kew, Richmond TW9 3DS, United Kingdom  
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  ISSN 00220477 (Issn) ISBN Medium  
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  Notes Export Date: 24 April 2012; Source: Scopus; Coden: Jecoa; doi: 10.1111/j.1365-2745.2012.01966.x; Language of Original Document: English; Correspondence Address: Chave, J.; Université Paul Sabatier, CNRS, UMR 5174 Laboratoire Evolution et Diversité Biologique, 31062 Toulouse, France; email: chave@cict.fr Approved no  
  Call Number EcoFoG @ webmaster @ Serial 393  
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Author Fouquet, A.; Dubut, V.; Hataway, R.; Scotti-Saintagne, C.; Scotti, I.; Noonan, B. doi  openurl
  Title Isolation and characterisation of 19 microsatellite loci from the Amazonian frog Adenomera andreae (Amphibia: Anura: Leptodactylidae) Type Journal Article
  Year 2009 Publication Conservation Genetics Resources Abbreviated Journal Conserv. Genet. Res.  
  Volume 1 Issue 1 Pages 217-220  
  Keywords Biomedicine  
  Abstract (up) Nineteen novel microsatellite loci were isolated from Adenomera andreae, a widespread Amazonian frog considered to be a species complex. Three multiplex kits were optimized. Genetic diversity was assessed in 66 individuals sampled in three populations along the West of the Approuague River catchment (French Guiana). We also tested the multiplex kits in four other Adenomera and nine Leptodactylus species with 43.4 and 17.5% success respectively.  
  Address  
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  Publisher Springer Netherlands Place of Publication Editor  
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  ISSN 1877-7252 ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number EcoFoG @ eric.marcon @ Serial 185  
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