Legeay, J., Husson, C., Boudier, B., Louisanna, E., Baraloto, C., Schimann, H., et al. (2020). Surprising low diversity of the plant pathogen Phytophthora in Amazonian forests. Environ. Microbiol., 22(12), 5019–5032.
Abstract: The genus Phytophthora represents a group of plant pathogens with broad global distribution. The majority of them cause the collar and root-rot of diverse plant species. Little is known about Phytophthora communities in forest ecosystems, especially in the Neotropical forests where natural enemies could maintain the huge plant diversity via negative density dependence. We characterized the diversity of soil-borne Phytophthora communities in the North French Guiana rainforest and investigated how they are structured by host identity and environmental factors. In this little-explored habitat, 250 soil cores were sampled from 10 plots hosting 10 different plant families across three forest environments (Terra Firme, Seasonally Flooded and White Sand). Phytophthora diversity was studied using a baiting approach and metabarcoding (High-Throughput Sequencing) on environmental DNA extracted from both soil samples and baiting-leaves. These three approaches revealed very similar communities, characterized by an unexpected low diversity of Phytophthora species, with the dominance of two cryptic species close to Phytophthora heveae. As expected, the Phytophthora community composition of the French Guiana rainforest was significantly impacted by the host plant family and environment. However, these plant pathogen communities are very small and are dominated by generalist species, questioning their potential roles as drivers of plant diversity in these Amazonian forests. © 2020 Society for Applied Microbiology and John Wiley & Sons Ltd.
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Prunier, J., Maurice, L., Perez, E., Gigault, J., Pierson Wickmann, A. - C., Davranche, M., et al. (2019). Trace metals in polyethylene debris from the North Atlantic subtropical gyre. Environ. Pollut., 245, 371–379.
Abstract: Plastic pollution in the marine environment poses threats to wildlife and habitats through varied mechanisms, among which are the transport and transfer to the food web of hazardous substances. Still, very little is known about the metal content of plastic debris and about sorption/desorption processes, especially with respect to weathering. In this study, plastic debris collected from the North Atlantic subtropical gyre was analyzed for trace metals; as a comparison, new packaging materials were also analyzed. Both the new items and plastic debris showed very scattered concentrations. The new items contained significant amounts of trace metals introduced as additives, but globally, metal concentrations were higher in the plastic debris. The results provide evidence that enhanced metal concentrations increase with the plastic state of oxidation for some elements, such as As, Ti, Ni, and Cd. Transmission electron microscopy showed the presence of mineral particles on the surface of the plastic debris. This work demonstrates that marine plastic debris carries complex mixtures of heavy metals. Such materials not only behave as a source of metals resulting from intrinsic plastic additives but also are able to concentrate metals from ocean water as mineral nanoparticles or adsorbed species. Plastic debris collected from the North Atlantic subtropical gyre was analyzed for trace metals. Marine plastic debris carry complex mixtures of heavy metals but it is evidence that plastic oxidation favors their adsorption.
Keywords: metals'accumulation; Microplastic; Plastic debris; Polyethylene; Polymer
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Lenoir, A., Touchard, A., Devers, S., Christidès, J. - P., Boulay, R., & Cuvillier-Hot, V. (2014). Ant cuticular response to phthalate pollution. Environ. Sci. Pollut. Res., 21(23), 13446–13451.
Abstract: Phthalates are common atmospheric contaminants used in the plastic industry. Ants have been shown to constitute good bioindicators of phthalate pollution. Hence, phthalates remain trapped on ant cuticles which are mostly coated with long-chain hydrocarbons. In this study, we artificially contaminated Lasius niger ants with four phthalates: dibutyl phthalate (DBP), diisobutyl phthalate (DiBP), di(2-ethylhexyl) phthalate (DEHP), and benzyl butyl phthalate (BBP). The first three have previously been found on ants in nature in Touraine (France), while the fourth has not. The four phthalates disappeared rapidly (less than 5 days) from the cuticles of live ants. In contrast, on the cuticles of dead ants, DEHP quantities remained unchanged over time. These results indicate that phthalates are actively absorbed by the cuticles of live ants. Cuticular absorption of phthalates is nonspecific because eicosane, a nonnatural hydrocarbon on L. niger cuticle, was similarly absorbed. Ants are important ecological engineers and may serve as bioindicators of ecosystem health. We also suggest that ants and more generally terrestrial arthropods may contribute to the removal of phthalates from the local environment.
Keywords: Absorption; Ants; Bbp; Bioindicator; Cuticle; Dbp; Dehp; DiBP; Phthalates; Pollutants
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Devault, D. A., Beilvert, B., & Winterton, P. (2017). Ship breaking or scuttling? A review of environmental, economic and forensic issues for decision support. Environ. Sci. Pollut. Res., 24(33), 25741–25774.
Abstract: In a globalized world, the world trade fleet plays a pivotal role in limiting transport costs. But, the management of obsolete ships is an acute problem, with most Ship Recycling Facilities (SRF) situated in developing countries. They are renowned for their controversial work and safety conditions and their environmental impact. Paradoxically, dismantlement is paid for by the shipowners in accordance with international conventions therefore it is more profitable for them to sell off ships destined for scrapping. Scuttling, the alternative to scrapping, is assessed in the present review to compare the cost/benefit ratios of the two approaches. Although scrapping provides employment and raw materials – but with environmental, health and safety costs – scuttling provides fisheries and diving tourism opportunities but needs appropriate management to avoid organic and metal pollution, introduction of invasive species and exacerbation of coastal erosion. It is also limited by appropriate bottom depth, ship type and number. The present review inventories the environmental, health, safety, economic, and forensic aspects of each alternative. © 2016, Springer-Verlag Berlin Heidelberg.
Keywords: Artificial reef; Diving; Ship recycling; Ship Recycling Facilities; Shipbreaking; Tourism; Working conditions; Wrecks; artificial reef; coastal erosion; coastal zone management; cost-benefit analysis; decision support system; developing world; economic impact; environmental economics; environmental impact assessment; environmental issue; facility location; health and safety; invasive species; profitability; recycling; shipping; tourism; working conditions; wreck; analysis; decision support system; economics; international cooperation; pollution; prevention and control; procedures; recycling; ship; statistics and numerical data; Decision Support Techniques; Environmental Pollution; Internationality; Recycling; Ships
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Baudrimont, M., Arini, A., Guégan, C., Venel, Z., Gigault, J., Pedrono, B., et al. (2020). Ecotoxicity of polyethylene nanoplastics from the North Atlantic oceanic gyre on freshwater and marine organisms (microalgae and filter-feeding bivalves). Environ. Sci. Pollut. Res., 27(4), 3746–3755.
Abstract: Each year, 5 to 10 million tons of plastic waste is dumped in the oceans via freshwaters and accumulated in huge oceanic gyres. Under the effect of several abiotic factors, macro plastic wastes (or plastic wastes with macro sizes) are fractionated into microplastics (MP) and finally reach the nanometric size (nanoplastic NP). To reveal potential toxic impacts of these NPs, two microalgae, Scenedemus subspicatus (freshwater green algae), and Thalassiosira weissiflogii (marine diatom) were exposed for up to 48 h at 1, 10, 100, 1000, and 10,000 μg/L to reference polyethylene NPs (PER) or NPs made from polyethylene collected in the North Atlantic gyre (PEN, 7th continent expedition in 2015). Freshwater filter-feeding bivalves, Corbicula fluminea, were exposed to 1000 μg/L of PER and PEN for 48 h to study a possible modification of their filtration or digestion capacity. The results show that PER and PEN do not influence the cell growth of T. weissiflogii, but the PEN exposure causes growth inhibition of S. subspicatus for all exposure concentrations tested. This growth inhibition is enhanced for a higher concentration of PER or PEN (10,000 μg/L) in S. subspicatus. The marine diatom T. weissiflogii appears to be less impacted by plastic pollution than the green algae S. subspicatus for the exposure time. Exposure to NPs does not lead to any alteration of bivalve filtration; however, fecal and pseudo-fecal production increased after PEN exposure, suggesting the implementation of rejection mechanisms for inedible particles. © 2019, Springer-Verlag GmbH Germany, part of Springer Nature.
Keywords: Cordicula fluminea; Ecotoxicity; Nanoplastics; Polyethylene; Scenedesmus subspicatus; Thalassiosira weissiflogii; bivalve; concentration (composition); ecotoxicology; filter feeder; gyre; microalga; nanoparticle; plastic waste; pollution exposure; polymer; Atlantic Ocean; Atlantic Ocean (North); Bivalvia; Chlorophyta; Corbicula fluminea; Desmodesmus subspicatus; Nitzschia alba; Thalassiosira
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Lehours, A. - C., Jeune, A. - H. L., Aguer, J. - P., Céréghino, R., Corbara, B., Kéraval, B., et al. (2016). Unexpectedly high bacteriochlorophyll a concentrations in neotropical tank bromeliads. Environmental Microbiology Reports, 8(5), 689–698.
Abstract: The contribution of bacteriochlorophyll a (BChl a) to photosynthetically driven electron transport is generally low in aquatic and terrestrial systems. Here, we provide evidence that anoxygenic bacterial phototrophy is widespread and substantial in water retained by tank bromeliads of a primary rainforest in French Guiana. An analysis of the water extracted from 104 randomly selected tank bromeliads using infrared fluorimetry suggested the overall presence of abundant anoxygenic phototrophic bacterial populations. We found that purple bacteria dominated these populations responsible for unusually high BChl a/chlorophyll a ratios (>50%). Our data suggest that BChl a-based phototrophy in tank bromeliads can have significant effects on the ecology of tank-bromeliad ecosystems and on the carbon and energy fluxes in Neotropical forests.
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Piponiot, C., Rödig, E., Putz, F. E., Rutishauser, E., Sist, P., Ascarrunz, N., et al. (2019). Can timber provision from Amazonian production forests be sustainable? Environmental Research Letters, 14(6), 064014.
Abstract: Around 30 Mm3 of sawlogs are extracted annually by selective logging of natural production forests in Amazonia, Earth’s most extensive tropical forest. Decisions concerning the management of these production forests will be of major importance for Amazonian forests’ fate. To date, no regional assessment of selective logging sustainability supports decision-making. Based on data from 3500 ha of forest inventory plots, our modelling results show that the average periodic harvests of 20 m3 ha−1 will not recover by the end of a standard 30 year cutting cycle. Timber recovery within a cutting cycle is enhanced by commercial acceptance of more species and with the adoption of longer cutting cycles and lower logging intensities. Recovery rates are faster in Western Amazonia than on the Guiana Shield. Our simulations suggest that regardless of cutting cycle duration and logging intensities, selectively logged forests are unlikely to meet timber demands over the long term as timber stocks are predicted to steadily decline. There is thus an urgent need to develop an integrated forest resource management policy that combines active management of production forests with the restoration of degraded and secondary forests for timber production. Without better management, reduced timber harvests and continued timber production declines are unavoidable.
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Lang, G., & Marcon, E. (2013). Testing randomness of spatial point patterns with the Ripley statistic. ESAIM PS, 17, 767–788.
Abstract: Aggregation patterns are often visually detected in sets of location data. These clusters may be the result of interesting dynamics or the effect of pure randomness. We build an asymptotically Gaussian test for the hypothesis of randomness corresponding to a homogeneous Poisson point process. We first compute the exact first and second moment of the Ripley K-statistic under the homogeneous Poisson point process model. Then we prove the asymptotic normality of a vector of such statistics for different scales and compute its covariance matrix. From these results, we derive a test statistic that is chi-square distributed. By a Monte-Carlo study, we check that the test is numerically tractable even for large data sets and also correct when only a hundred of points are observed
Keywords: Central limit theorem, goodness-of-fit test, Höffding decomposition, null, point pattern, Poisson process, null
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Sierra, J., Daudin, D., Domenach, A. M., Nygren, P., & Desfontaines, L. (2007). Nitrogen transfer from a legume tree to the associated grass estimated by the isotopic signature of tree root exudates: A comparison of the N-15 leaf feeding and natural N-15 abundance methods. Eur. J. Agron., 27(2-4), 178–186.
Abstract: Nitrogen (N) transfer from legume trees to associated crops is a key factor for the N economy of low-input agroforestry systems. In this work, we presented a new approach to estimate N transfer based on the N-15 content of root exudates and N released by root turnover of the donor plant (Gliricidia sepium) and the temporal change of the N-15 content of the receiver plant (Dichanthium aristatum). The study was carried out in greenhouse using two isotopic methods: N-15 leaf feeding (LF) and the natural N-15 abundance (NA). Measurements of exudate N-15 were made at several dates before and after tree pruning. A time-dependent box model was devised to quantify N transfer in time and to make comparisons between the isotopic methods. In NA, although tree roots and exudates presented a similar N-15 signature before tree pruning, exudates were strongly depleted in N-15 after pruning. In LF, exudates were always depleted in N-15 in relation to tree roots. Hence, the current assumption used in N transfer studies concerning the equal N-15/N-14 distribution in tissues of the donor plant and in its excreted N was not confirmed in our study. Before pruning, N transfer functioned as a two-N-source system (soil N and exudates N) and both isotopic methods provided similar estimates: 11-12% for LF and 10-15% for NA. Calculations per-formed with the model indicated that N transfer occurred with small or nil fractionation of N-15 in exudates. After pruning, there was a third N source associated with N released from tree root turnover. During this period, the isotopic signature of the receiver plant showed a transient state due to the progressive decrease of N-15 content of that N source. The amount of N derived from the tree represented 65% of the total N content of the. grass at the end of the experiments. (c) 2007 Elsevier B.V. All rights reserved.
Keywords: agroforestry; box model; gliricidia sepium; N-15 fractionation; root turnover; tree pruning
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Male, P. J. G., Loiseau, A., Estoup, A., Quilichini, A., & Orivel, J. (2010). Characterization of polymorphic microsatellite loci in the neotropical plant-ant Allomerus decemarticulatus (Formicidae: Myrmicinae) and multiplexing with other microsatellites from the ant subfamily Myrmicinae. Eur. J. Entomol., 107(4), 673–675.
Abstract: Five polymorphic microsatellite loci of the arboreal ant Allomerus decemarticulatus (Myrmicinae) were isolated and characterized. The amplification and polymorphism of seven additional microsatellite loci, previously developed for the ant species A. octoarticulatus and Wasmannia auropunctata, were also tested and the amplification conditions necessary for genotyping the complete set of 12 multiplexed markers in A. decemarticulatus determined. The number of alleles per locus ranged from three to 15 and observed heterozygosity varied front 0.09 to 0.95. Cross-species amplification of these loci was also successfully achieved in additional species of the same ant subfamily, Myrmicinae. This set of microsatellite markers will be used in studies on the mating system and population genetic structure of Myrmicinae in general and A. decemarticulatus in particular.
Keywords: Hymenoptera; Formicidae; Myrmicinae; Allomerus; ant-plant mutualism; microsatellites; plant-ant
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