PT Journal
AU Chaves, C
   Blanc-Jolivet, C
   Sebbenn, A
   Mader, M
   Meyer-Sand, B
   Paredes-Villanueva, K
   Honorio Coronado, E
   Garcia-Davila, C
   Tysklind, N
   Troispoux, V
   Massot, M
   Degen, B
TI Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees
SO Conservation Genetics Resources
JI Conserv. Gen. Res.
PY 2019
BP 329
EP 331
VL 11
IS 3
DI 10.1007/s12686-018-1077-1
DE DNA fingerprints; Geographical origin; MiSeq; RADSeq
AB We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed. © 2018, Springer Nature B.V.
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