TY  - JOUR
AU  - Honorio Coronado, E.N.
AU  - Blanc-Jolivet, C.
AU  - Mader, M.
AU  - García-Dávila, C.R.
AU  - Sebbenn, A.M.
AU  - Meyer-Sand, B.R.V.
AU  - Paredes-Villanueva, K.
AU  - Tysklind, N.
AU  - Troispoux, V.
AU  - Massot, M.
AU  - Degen, B.
PY  - 2019//
TI  - Development of nuclear and plastid SNP markers for genetic studies of Dipteryx tree species in Amazonia
T2  - Conserv. Genet. Res.
JO  - Conservation Genetics Resources
SP  - 333
EP  - 336
VL  - 11
IS  - 3
N2  - We developed nuclear and plastid single nucleotide polymorphism (SNP) and insertion/deletion (INDEL) markers for Dipteryx species using a combination of restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing. Of the total 315 loci genotyped using a MassARRAY platform, 292 loci were variable and polymorphic among the 73 sampled individuals from French Guiana, Brasil, Peru, and Bolivia. A final set of 56 nuclear SNPs, 26 chloroplast SNPs, 2 chloroplast INDELs, and 32 mitochondrial SNPs identifying significant population structure was developed. This set of loci will be useful for studies on population genetics of Dipteryx species in Amazonia.
SN  - 1877-7260
UR  - https://doi.org/10.1007/s12686-019-01081-3
UR  - http://dx.doi.org/10.1007/s12686-019-01081-3
N1  - exported from refbase (http://php.ecofog.gf/refbase/show.php?record=906), last updated on Mon, 06 Jan 2020 16:18:11 -0300
ID  - HonorioCoronado_etal2019
ER  -