%0 Journal Article
%T Development of nuclear and plastid SNP markers for genetic studies of Dipteryx tree species in Amazonia
%A Honorio Coronado, E.N.
%A Blanc-Jolivet, C.
%A Mader, M.
%A García-Dávila, C.R.
%A Sebbenn, A.M.
%A Meyer-Sand, B.R.V.
%A Paredes-Villanueva, K.
%A Tysklind, N.
%A Troispoux, V.
%A Massot, M.
%A Degen, B.
%J Conservation Genetics Resources
%D 2019
%V 11
%N 3
%@ 1877-7260
%F HonorioCoronado_etal2019
%O exported from refbase (http://php.ecofog.gf/refbase/show.php?record=906), last updated on Mon, 06 Jan 2020 16:18:11 -0300
%X We developed nuclear and plastid single nucleotide polymorphism (SNP) and insertion/deletion (INDEL) markers for Dipteryx species using a combination of restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing. Of the total 315 loci genotyped using a MassARRAY platform, 292 loci were variable and polymorphic among the 73 sampled individuals from French Guiana, Brasil, Peru, and Bolivia. A final set of 56 nuclear SNPs, 26 chloroplast SNPs, 2 chloroplast INDELs, and 32 mitochondrial SNPs identifying significant population structure was developed. This set of loci will be useful for studies on population genetics of Dipteryx species in Amazonia.
%U https://doi.org/10.1007/s12686-019-01081-3
%U http://dx.doi.org/10.1007/s12686-019-01081-3
%P 333-336