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Scotti, I.; Calvo-Vialettes, L.; Scotti-Saintagne, C.; Citterio, M.; Degen, B.; Bonal, D. |
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Title |
Genetic variation for growth, morphological, and physiological traits in a wild population of the Neotropical shade tolerant rainforest tree Sextonia rubra (Mez) van der Werff (Lauraceae) |
Type |
Journal Article |
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Year |
2010 |
Publication |
Tree Genetics & Genomes |
Abbreviated Journal |
Tree Genet. Genomes |
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Volume |
6 |
Issue |
2 |
Pages |
319-329 |
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Keywords |
Ecophysiological traits; Heritability; Guiana shield; Amazon; Ecological genetics |
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Abstract |
Quantitative genetic diversity is a fundamental component of the interaction between natural populations and their environment. In breeding programmes, quantitative genetic studies on tropical trees have so far focused on fast-growing, light-demanding species, but no information exists on shade-tolerant, slow-growing species. For this study, 27 3-year-old open-pollinated families of the Neotropical shade-tolerant rainforest tree Sextonia rubra were measured in semicontrolled conditions for 20 morphological, growth, and photosynthesis traits; the effect of genetic relatedness, habitat of provenance, and mother tree status on seedling traits was analysed. Nine traits displayed significant genetic effects, while mother tree status and habitat effects were not significant (P > 0.05) for an y trait. Estimated heritability varied between 0.14 and 0.28, with growth-related traits having the highest values. Additive genetic variation correlated positively with nonheritable variation, suggesting that ecological-evolutionary factors increasing or decreasing additive genetic variance may also affect nonheritable variation in the same direction. Our results suggest that quantitative genetic variability should be taken into account in ecological studies on, and in the management of, natural tropical rainforests; further research is needed to investigate genetic x environment interactions, in particular from the point of view of the genetic response of shade-tolerant plant species to variations in light availability. |
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[Scotti, Ivan; Scotti-Saintagne, Caroline; Bonal, Damien] INRA, Unite Mixte Rech Ecol Forets Guyane, Kourou 97387, French Guiana, Email: ivan.scotti@ecofog.gf |
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SPRINGER HEIDELBERG |
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1614-2942 |
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ISI:000274112600015 |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
68 |
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Schwalm, C.R.; Williams, C.A.; Schaefer, K.; Arneth, A.; Bonal, D.; Buchmann, N.; Chen, J.Q.; Law, B.E.; Lindroth, A.; Luyssaert, S.; Reichstein, M.; Richardson, A.D. |
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Title |
Assimilation exceeds respiration sensitivity to drought: A FLUXNET synthesis |
Type |
Journal Article |
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Year |
2010 |
Publication |
Global Change Biology |
Abbreviated Journal |
Glob. Change Biol. |
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Volume |
16 |
Issue |
2 |
Pages |
657-670 |
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Keywords |
biome; carbon cycling; drought; eddy covariance; evaporative fraction; FLUXNET; synthesis |
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Abstract |
The intensification of the hydrological cycle, with an observed and modeled increase in drought incidence and severity, underscores the need to quantify drought effects on carbon cycling and the terrestrial sink. FLUXNET, a global network of eddy covariance towers, provides dense data streams of meteorological data, and through flux partitioning and gap filling algorithms, estimates of net ecosystem productivity (F-NEP), gross ecosystem productivity (P), and ecosystem respiration (R). We analyzed the functional relationship of these three carbon fluxes relative to evaporative fraction (EF), an index of drought and site water status, using monthly data records from 238 micrometeorological tower sites distributed globally across 11 biomes. The analysis was based on relative anomalies of both EF and carbon fluxes and focused on drought episodes by biome and climatic season. Globally P was approximate to 50% more sensitive to a drought event than R. Network-wide drought-induced decreases in carbon flux averaged -16.6 and -9.3 g C m-2 month-1 for P and R, i.e., drought events induced a net decline in the terrestrial sink. However, in evergreen forests and wetlands drought was coincident with an increase in P or R during parts of the growing season. The most robust relationships between carbon flux and EF occurred during climatic spring for F-NEP and in climatic summer for P and R. Upscaling flux sensitivities to a global map showed that spatial patterns for all three carbon fluxes were linked to the distribution of croplands. Agricultural areas exhibited the highest sensitivity whereas the tropical region had minimal sensitivity to drought. Combining gridded flux sensitivities with their uncertainties and the spatial grid of FLUXNET revealed that a more robust quantification of carbon flux response to drought requires additional towers in all biomes of Africa and Asia as well as in the cropland, shrubland, savannah, and wetland biomes globally. |
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[Schwalm, Christopher R.; Williams, Christopher A.] Clark Univ, Grad Sch Geog, Worcester, MA 01610 USA, Email: cschwalm@clarku.edu |
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WILEY-BLACKWELL PUBLISHING, INC |
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1354-1013 |
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ISI:000274419400014 |
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EcoFoG @ eric.marcon @ |
Serial |
69 |
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Chave, J.; Navarrete, D.; Almeida, S.; Alvarez, E.; Aragao, L.E.O.C.; Bonal, D.; Chatelet, P.; Silva-Espejo, J.E.; Goret, J.Y.; von Hildebrand, P.; Jimenez, E.; Patino, S.; Penuela, M.C.; Phillips, O.L.; Stevenson, P.; Malhi, Y. |
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Title |
Regional and seasonal patterns of litterfall in tropical South America |
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Journal Article |
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Year |
2010 |
Publication |
Biogeosciences |
Abbreviated Journal |
Biogeosciences |
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Volume |
7 |
Issue |
1 |
Pages |
43-55 |
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The production of aboveground soft tissue represents an important share of total net primary production in tropical rain forests. Here we draw from a large number of published and unpublished datasets (n=81 sites) to assess the determinants of litterfall variation across South American tropical forests. We show that across old-growth tropical rainforests, litterfall averages 8.61 +/- 1.91 Mg ha(-1) yr(-1) (mean +/- standard deviation, in dry mass units). Secondary forests have a lower annual litterfall than old-growth tropical forests with a mean of 8.01 +/- 3.41 Mg ha(-1) yr(-1). Annual litterfall shows no significant variation with total annual rainfall, either globally or within forest types. It does not vary consistently with soil type, except in the poorest soils (white sand soils), where litterfall is significantly lower than in other soil types (5.42 +/- 1.91 Mg ha(-1) yr(-1)). We also study the determinants of litterfall seasonality, and find that it does not depend on annual rainfall or on soil type. However, litterfall seasonality is significantly positively correlated with rainfall seasonality. Finally, we assess how much carbon is stored in reproductive organs relative to photosynthetic organs. Mean leaf fall is 5.74 +/- 1.83 Mg ha(-1) yr(-1) (71% of total litterfall). Mean allocation into reproductive organs is 0.69 +/- 0.40 Mg ha(-1) yr(-1) (9% of total litterfall). The investment into reproductive organs divided by leaf litterfall increases with soil fertility, suggesting that on poor soils, the allocation to photosynthetic organs is prioritized over that to reproduction. Finally, we discuss the ecological and biogeochemical implications of these results. |
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[Chave, J.] CNRS UPS, Lab Evolut & Divers Biol, UMR 5174, Toulouse, France, Email: chave@cict.fr |
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COPERNICUS GESELLSCHAFT MBH |
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1726-4170 |
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ISI:000274058100004 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
70 |
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Author |
Coutand, C.; Chevolot, M.; Lacointe, A.; Rowe, N.; Scotti, I. |
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Title |
Mechanosensing of stem bending and its interspecific variability in five neotropical rainforest species |
Type |
Journal Article |
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Year |
2010 |
Publication |
Annals of Botany |
Abbreviated Journal |
Ann. Bot. |
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Volume |
105 |
Issue |
2 |
Pages |
341-347 |
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Keywords |
Mechanosensing; interspecific variability; trees; lianas; rain forest; neotropical species; bending; biomechanics; Bauhinia; Eperua; Symphonia; Tachigali |
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Abstract |
In rain forests, sapling survival is highly dependent on the regulation of trunk slenderness (height/diameter ratio): shade-intolerant species have to grow in height as fast as possible to reach the canopy but also have to withstand mechanical loadings (wind and their own weight) to avoid buckling. Recent studies suggest that mechanosensing is essential to control tree dimensions and stability-related morphogenesis. Differences in species slenderness have been observed among rainforest trees; the present study thus investigates whether species with different slenderness and growth habits exhibit differences in mechanosensitivity. Recent studies have led to a model of mechanosensing (sum-of-strains model) that predicts a quantitative relationship between the applied sum of longitudinal strains and the plant's responses in the case of a single bending. Saplings of five different neotropical species (Eperua falcata, E. grandiflora, Tachigali melinonii, Symphonia globulifera and Bauhinia guianensis) were subjected to a regimen of controlled mechanical loading phases (bending) alternating with still phases over a period of 2 months. Mechanical loading was controlled in terms of strains and the five species were subjected to the same range of sum of strains. The application of the sum-of-strain model led to a dose-response curve for each species. Dose-response curves were then compared between tested species. The model of mechanosensing (sum-of-strain model) applied in the case of multiple bending as long as the bending frequency was low. A comparison of dose-response curves for each species demonstrated differences in the stimulus threshold, suggesting two groups of responses among the species. Interestingly, the liana species B. guianensis exhibited a higher threshold than other Leguminosae species tested. This study provides a conceptual framework to study variability in plant mechanosensing and demonstrated interspecific variability in mechanosensing. |
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[Coutand, Catherine; Lacointe, Andre] Univ Clermont Ferrand, INRA, PIAF, UMR 547, F-63000 Clermont Ferrand, France, Email: coutand@clermont.inra.fr |
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OXFORD UNIV PRESS |
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0305-7364 |
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ISI:000274347000025 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
71 |
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Author |
Baraloto, C.; Paine, C.E.T.; Patino, S.; Bonal, D.; Herault, B.; Chave, J. |
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Title |
Functional trait variation and sampling strategies in species-rich plant communities |
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Journal Article |
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Year |
2010 |
Publication |
Functional Ecology |
Abbreviated Journal |
Funct. Ecol. |
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Volume |
24 |
Issue |
1 |
Pages |
208-216 |
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Keywords |
French Guiana; functional diversity; plant traits; specific leaf area; wood density; sampling design; tropical forest |
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Abstract |
P> Despite considerable interest in the application of plant functional traits to questions of community assembly and ecosystem structure and function, there is no consensus on the appropriateness of sampling designs to obtain plot-level estimates in diverse plant communities. We measured 10 plant functional traits describing leaf and stem morphology and ecophysiology for all trees in nine 1-ha plots in terra firme lowland tropical rain forests of French Guiana (N = 4709). We calculated, by simulation, the mean and variance in trait values for each plot and each trait expected under seven sampling methods and a range of sampling intensities. Simulated sampling methods included a variety of spatial designs, as well as the application of existing data base values to all individuals of a given species. For each trait in each plot, we defined a performance index for each sampling design as the proportion of resampling events that resulted in observed means within 5% of the true plot mean, and observed variance within 20% of the true plot variance. The relative performance of sampling designs was consistent for estimations of means and variances. Data base use had consistently poor performance for most traits across all plots, whereas sampling one individual per species per plot resulted in relatively high performance. We found few differences among different spatial sampling strategies; however, for a given strategy, increased intensity of sampling resulted in markedly improved accuracy in estimates of trait mean and variance. We also calculated the financial cost of each sampling design based on data from our 'every individual per plot' strategy and estimated the sampling and botanical effort required. The relative performance of designs was strongly positively correlated with relative financial cost, suggesting that sampling investment returns are relatively constant. Our results suggest that trait sampling for many objectives in species-rich plant communities may require the considerable effort of sampling at least one individual of each species in each plot, and that investment in complete sampling, though great, may be worthwhile for at least some traits. |
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Address |
[Baraloto, Christopher; Patino, Sandra; Bonal, Damien] INRA, UMR Ecol Forets Guyane, F-97387 Kourou, French Guiana, Email: chris.baraloto@ecofog.gf |
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WILEY-BLACKWELL PUBLISHING, INC |
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ISSN |
0269-8463 |
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Notes |
ISI:000273455500024 |
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no |
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Call Number |
EcoFoG @ eric.marcon @ |
Serial |
72 |
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Author |
Courtois, E.A.; Paine, C.E.T.; Blandinieres, P.A.; Stien, D.; Bessiere, J.M.; Houel, E.; Baraloto, C.; Chave, J. |
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Title |
Diversity of the Volatile Organic Compounds Emitted by 55 Species of Tropical Trees: a Survey in French Guiana |
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Journal Article |
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Year |
2009 |
Publication |
Journal of Chemical Ecology |
Abbreviated Journal |
J. Chem. Ecol. |
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Volume |
35 |
Issue |
11 |
Pages |
1349-1362 |
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Keywords |
VOCs; Chemical diversity; Sesquiterpenes; Tropical; French Guiana |
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Abstract |
Volatile organic compounds (VOCs) are produced by a broad range of organisms, from bacteria to mammals, and they represent a vast chemical diversity. In plants, one of the preeminent roles of VOCs is their repellent or cytotoxic activity, which helps the plant deter its predators. Most studies on VOCs emitted by vegetative parts have been conducted in model plant species, and little is known about patterns of VOC emissions in diverse plant communities. We conducted a survey of the VOCs released immediately after mechanical damage of the bark and the leaves of 195 individual trees belonging to 55 tropical tree species in a lowland rainforest of French Guiana. We discovered a remarkably high chemical diversity, with 264 distinct VOCs and a mean of 37 compounds per species. Two monoterpenes (alpha-pinene and limonene) and two sesquiterpenes (beta-caryophyllene and alpha-copaene), which are known to have cytotoxic and deterrent effects, were the most frequent compounds in the sampled species. As has been established for floral scents, the blend of VOCs is largely species-specific and could be used to discriminate among 43 of the 55 sampled species. The species with the most diverse blends were found in the Sapindales, Laurales, and Magnoliales, indicating that VOC diversity is not uniformly distributed among tropical species. Interspecific variation in chemical diversity was caused mostly by variation in sesquiterpenes. This study emphasizes three aspects of VOC emission by tropical tree species: the species-specificity of the mixtures, the importance of sesquiterpenes, and the wide-ranging complexity of the mixtures. |
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Address |
[Courtois, Elodie A.; Blandinieres, Pierre-Alain; Stien, Didier; Houel, Emeline] CNRS, UMR Ecofog, F-97337 Cayenne, France, Email: courtois@cict.fr |
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SPRINGER |
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ISSN |
0098-0331 |
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ISI:000273086100009 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
73 |
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Cabanillas, B.J.; Le Lamer, A.C.; Castillo, D.; Arevalo, J.; Rojas, R.; Odonne, G.; Bourdy, G.; Moukarzel, B.; Sauvain, M.; Fabre, N. |
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Title |
Caffeic Acid Esters and Lignans from Piper sanguineispicum |
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Journal Article |
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Year |
2010 |
Publication |
Journal of Natural Products |
Abbreviated Journal |
J. Nat. Prod. |
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Volume |
73 |
Issue |
11 |
Pages |
1884-1890 |
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Abstract |
Three new caffeic acid esters (1-3), four new lignans (4-7), and the known compounds (7'S)-parabenzlactone (8), dihydrocubebin (9), and justiflorinol (10) have been isolated from leaves of Piper sanguineispicum. Their structures were determined by spectroscopic methods, including 1D and 2D NMR, HRCIMS, CD experiments, and chemical methods. Compounds 1-10 were assessed for their antileishmanial potential against axenic amastigote forms of Leishmania amazonensis. Caffeic acid esters 1 and 3 exhibited the best antileishmanial activity (IC50 2.0 and 1.8 μM, respectively) with moderate cytotoxicity on murine macrophages. |
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[Cabanillas, Billy Joel; Le Lamer, Anne-Cecile; Odonne, Guillaume; Bourdy, Genevieve; Moukarzel, Beatrice; Sauvain, Michel; Fabre, Nicolas] Univ Toulouse, UPS, UMR 152, Lab Pharmacochim Subst Nat & Pharmacophores Redox, F-31062 Toulouse 9, France, Email: michel.sauvain@ird.fr |
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AMER CHEMICAL SOC |
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0163-3864 |
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ISI:000284559100024 |
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no |
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EcoFoG @ eric.marcon @ |
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74 |
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Roggy, J.C.; Nicolini, E.; Imbert, P.; Caraglio, Y.; Bosc, A.; Heuret, P. |
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Title |
Links between tree structure and functional leaf traits in the tropical forest tree Dicorynia guianensis Amshoff (Caesalpiniaceae) |
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Journal Article |
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Year |
2005 |
Publication |
Annals of Forest Science |
Abbreviated Journal |
Ann. For. Sci. |
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Volume |
62 |
Issue |
6 |
Pages |
553-564 |
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Keywords |
Dicorynia guianensis; leaf structure; functional leaf traits; plasticity; tree structure |
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Abstract |
This study looked at the interactive effects of tree architectural stage of development (ASD) and light availability on different plant traits (growth parameters, leaf morpho-anatomy and photosynthetic capacities) in the tropical species Dicorynia guianensis. A qualitative architectural analysis was used to categorize tree individuals sampled along a natural light gradient. The results show that some traits could have an ASD-dependence at the whole plant and leaf level without control of light. The changes observed relate to vigour thresholds the plant has to reach to shift from one ASD to another (i.e., the number of nodes and the internodes length per Growth Unit). Light conditions do not modify these thresholds but may modify the time they are crossed. Tree height was found strongly modulated by light conditions; hence, at a similar height, individuals may belong to different ASD. At the functional level, a decrease in N-m, and A(maxm) was observed with increasing light availability, while N-a increased and A(maxa) remained unaffected. An ASD effect was also observed on Amaxa and LMA but not on Amaxm. These results demonstrated a weak ability of photosynthetic plasticity in response to light conditions, and that variations of leaf photosynthetic variables according to ASD can be explained by modifications in leaf nitrogen and LMA. Questions on the reliability of a height-based sampling strategy for evaluating the phenotypic plasticity of trees in relation to light conditions are raised. |
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Address |
INRA, Ecol Forets Guyane, ENGREF, UMR CIRAD, F-97387 Kourou, Guyane Francais, France, Email: roggy.j@cirad.fr |
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EDP SCIENCES S A |
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1286-4560 |
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ISI:000232084400009 |
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no |
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EcoFoG @ eric.marcon @ |
Serial |
229 |
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Author |
Vedel, V.; Scotti, I. |
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Title |
Promoting the promoter |
Type |
Journal Article |
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Year |
2011 |
Publication |
Plant Science |
Abbreviated Journal |
Plant Sci. |
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Volume |
180 |
Issue |
2 |
Pages |
182-189 |
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Keywords |
cis-Regulation; Evolutionary and developmental biology; Integrative evolution; Plant development; Population genetics; Transcription |
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Abstract |
Recent evolutionary studies clearly indicate that evolution is mainly driven by changes in the complex mechanisms of gene regulation and not solely by polymorphism in protein-encoding genes themselves. After a short description of the cis-regulatory mechanism, we intend in this review to argue that by applying newly available technologies and by merging research areas such as evolutionary and developmental biology, population genetics, ecology and molecular cell biology it is now possible to study evolution in an integrative way. We contend that, by analysing the effects of promoter sequence variation on phenotypic diversity in natural populations, we will soon be able to break the barrier between the study of extant genetic variability and the study of major developmental changes. This will lead to an integrative view of evolution at different scales. Because of their sessile nature and their continuous development, plants must permanently regulate their gene expression to react to their environment, and can, therefore, be considered as a remarkable model for these types of studies. (C) 2010 Elsevier Ireland Ltd. All rights reserved. |
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Address |
[Vedel, Vincent; Scotti, Ivan] INRA, UMR ECOFOG, Kourou 97387, French Guiana, Email: vincent.vedel@ecofog.gf |
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ELSEVIER IRELAND LTD |
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0168-9452 |
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ISI:000286562200002 |
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EcoFoG @ eric.marcon @ |
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291 |
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Author |
Gourlet-Fleury, S.; Blanc, L.; Picard, N.; Sist, P.; Dick, J.; Nasi, R.; Swaine, M.D.; Forni, E. |
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Title |
Grouping species for predicting mixed tropical forest dynamics: looking for a strategy |
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Journal Article |
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Year |
2005 |
Publication |
Annals of Forest Science |
Abbreviated Journal |
Ann. For. Sci. |
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62 |
Issue |
8 |
Pages |
785-796 |
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Keywords |
cross-comparisons; functional groups; modelling strategy; species classifications |
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Abstract |
The high species diversity of mixed tropical forests hinders the development of forest dynamic models. A solution commonly adopted is to cluster species in groups. There are various methods for grouping species that can be linked to three strategies (i) the ecological subjective strategy, (ii) the ecological data-driven strategy, and (iii) the dynamic process strategy. In the first two strategies a species will be assigned to a single group while in the latter strategy, a specific grouping is defined for each process of population dynamics ( typically based on recruitment, growth, mortality). Little congruency or convergence is observed in the literature between any two classifications of species. This may be explained by the independence between the sets of tree characters used to build species groups, or by the intra-specific variability of these characters. We therefore recommend the dynamic process strategy as the most convenient strategy for building groups of species. |
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Address |
Cirad Foret, F-34398 Montpellier, France, Email: sylvie.gourlet-fleury@cirad.fr |
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EDP SCIENCES S A |
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1286-4560 |
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ISI:000233972500001 |
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no |
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EcoFoG @ eric.marcon @ |
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228 |
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